ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7p09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYO52_SCHPO (O94477) Myosin-52 (Myosin type V-2) 34 0.099
2MYO2_YEAST (P19524) Myosin-2 (Class V unconventional myosin MYO2... 30 1.1
3MYO2_SACBA (Q876G9) Myosin-2 (Class V unconventional myosin MYO2... 30 1.1
4OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3) 29 3.2
5MYO2B_SACCA (Q875X4) Myosin-2B (Class V unconventional myosin MY... 29 3.2
6EIL4_ARATH (Q9LX16) Putative ETHYLENE-INSENSITIVE3-like 4 protein 28 4.2
7MYO2A_SACCA (Q875X3) Myosin-2A (Class V unconventional myosin MY... 28 4.2
8RPOB_STAPU (Q32RW5) DNA-directed RNA polymerase beta chain (EC 2... 28 7.1
9ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-... 27 9.3
10CP19A_HUMAN (P11511) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromat... 27 9.3
11CARA_THEMA (Q9WZ28) Carbamoyl-phosphate synthase small chain (EC... 27 9.3
12MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2... 27 9.3

>MYO52_SCHPO (O94477) Myosin-52 (Myosin type V-2)|
          Length = 1516

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 166 NEENVXYILCLQQDKDIEYWGIDFQAVVSRCKELGI 273
           NE N  YI C++ +++ E W  D Q VVS+ +  G+
Sbjct: 655 NETNAHYIRCIKPNEEKEAWKFDNQMVVSQLRACGV 690



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>MYO2_YEAST (P19524) Myosin-2 (Class V unconventional myosin MYO2) (Type V|
           myosin heavy chain MYO2) (Myosin V MYO2) (Cell divison
           control protein 66)
          Length = 1574

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 166 NEENVXYILCLQQDKDIEYWGIDFQAVVSRCKELGI 273
           N  NV YI C++ + D E W  D   V+S+ +  G+
Sbjct: 659 NSTNVHYIRCIKPNADKEAWQFDNLMVLSQLRACGV 694



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>MYO2_SACBA (Q876G9) Myosin-2 (Class V unconventional myosin MYO2) (Type V|
           myosin heavy chain MYO2) (Myosin V MYO2)
          Length = 1568

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 166 NEENVXYILCLQQDKDIEYWGIDFQAVVSRCKELGI 273
           N  NV YI C++ + D E W  D   V+S+ +  G+
Sbjct: 661 NSTNVHYIRCIKPNADKEAWQFDNLMVLSQLRACGV 696



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>OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)|
          Length = 338

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -3

Query: 178 HFPHFSSDQYRQAXEVVSQQSSYHLXQ----HNSYQGRGGTRMGSASS 47
           H PH    Q   A  V      +H+ Q    H  +QG GGT +  +SS
Sbjct: 253 HHPHAHHSQLSTAAAVSGHHHPHHIGQSSGHHPHHQGYGGTALPFSSS 300



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>MYO2B_SACCA (Q875X4) Myosin-2B (Class V unconventional myosin MYO2B) (Type V|
           myosin heavy chain MYO2B) (Myosin V MYO2B)
          Length = 1419

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 166 NEENVXYILCLQQDKDIEYWGIDFQAVVSRCKELGI 273
           N  NV YI C++ + + E W  D   V+S+ +  G+
Sbjct: 658 NSTNVHYIRCIKPNTEKEAWKFDNLMVLSQLRACGV 693



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>EIL4_ARATH (Q9LX16) Putative ETHYLENE-INSENSITIVE3-like 4 protein|
          Length = 471

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -3

Query: 142 AXEVVSQQSSYHLXQHNSYQGRGGTRMGSASSASWRCCSPPSXRFPV 2
           A E++ + SS     H   Q    T +GS  SA  + C PP  RFP+
Sbjct: 138 AAELIDKSSSSSSLLH-MLQELQDTTLGSLLSALMQHCMPPQRRFPL 183



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>MYO2A_SACCA (Q875X3) Myosin-2A (Class V unconventional myosin MYO2A) (Type V|
           myosin heavy chain MYO2A) (Myosin V MYO2A)
          Length = 1567

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 166 NEENVXYILCLQQDKDIEYWGIDFQAVVSRCKELGI 273
           N  NV YI C++ + + E W  D   V+S+ +  G+
Sbjct: 664 NSTNVHYIRCIKPNGEKEAWKFDNLMVLSQLRACGV 699



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>RPOB_STAPU (Q32RW5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta subunit) (RNA
           polymerase beta subunit)
          Length = 1068

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +1

Query: 145 DDIDHLKNEENVXYILCLQQDKDIEYWGIDFQAVVSRCKELGIQHMR 285
           DDIDHLKN+  +     L+  K +    ID Q  V R    GI   R
Sbjct: 304 DDIDHLKNKHVISVAEMLR--KQLSLCLIDLQIQVRRAIRRGISSKR 348



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>ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-binding|
           subunit (ERF2) (Translation release factor 3)
           (Polypeptide release factor 3) (ERF3) (ERF-3)
           (Omnipotent suppressor protein 2)
          Length = 741

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 172 PHFSSDQYRQAXEVVSQQSSYHLXQHNSYQGRGG 71
           P+    Q +Q  +   QQ +Y+   +N+Y  RGG
Sbjct: 51  PYIPGQQEQQFGQYGQQQQNYNQGGYNNYNNRGG 84



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>CP19A_HUMAN (P11511) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 502

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 133 VVSQQSS-YHLXQHNSYQGRGGTRMG 59
           ++S+ SS +H+ +HN Y  R G+++G
Sbjct: 95  IISKSSSMFHIMKHNHYSSRFGSKLG 120



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>CARA_THEMA (Q9WZ28) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase glutamine chain)
          Length = 392

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 226 GIDFQAVVSRCKELGIQHMRRPAVDFDPDSLRKQSAES 339
           G+D +A+  + +  G        VD DPDSL K+  ES
Sbjct: 112 GVDTRALTRKIRVKGAMKGAISTVDLDPDSLVKRVKES 149



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>MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2) (Type V|
           myosin heavy chain MYO2) (Myosin V MYO2)
          Length = 1554

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 166 NEENVXYILCLQQDKDIEYWGIDFQAVVSRCKELGI 273
           N  NV YI C++ ++  E W  D   V+S+ +  G+
Sbjct: 653 NSTNVHYIRCIKPNEVKEAWVFDNLMVLSQLRACGV 688


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,503,684
Number of Sequences: 219361
Number of extensions: 792115
Number of successful extensions: 2103
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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