>ATPQ_ARATH (Q9FT52) ATP synthase D chain, mitochondrial (EC 3.6.3.14)|
          Length = 167

 Score =  146 bits (368), Expect(2) = 1e-35
 Identities = 72/101 (71%), Positives = 77/101 (76%)
 Frame = +3

Query: 21  QKGIGSKVVDMYKEAYDSIEIPKYVDTVTPRYKPKFDALLVELKEAEKTSLKESXXXXXX 200
           +KGIG+ +VD YKEAYDSIEIPKYVD VTP YKPKFDALLVELKEAE+ SLKES      
Sbjct: 67  RKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKE 126

Query: 201 XXXXXXXXXXXSTMTADEYFAKHPELKKKFDDEMRNDYWGY 323
                      STMTADEYF KHPELKKKFDDE+RND WGY
Sbjct: 127 IADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 167



 Score = 22.7 bits (47), Expect(2) = 1e-35
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +1

Query: 4  IDWEYYRK 27
          IDW+YYRK
Sbjct: 61 IDWDYYRK 68

>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 149 EGGREDISEGIREDREGDC*NEGDEEKDQHND 244
           EGG ED+ E    D +GD   E DE+ ++  D
Sbjct: 202 EGGEEDVEEDEEVDEDGDDDEEVDEDAEEEED 233

>AATF_RAT (Q9QYW0) Protein AATF (Apoptosis-antagonizing transcription factor)|
          Length = 523

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +2

Query: 149 EGGREDISEGIREDREGDC*NEGDEEKDQHNDSRRVL 259
           EG  E+ISE + ED EG+  +E D E+D++++   V+
Sbjct: 139 EGLEEEISEDVEEDLEGE--DEEDREEDRNSEDDGVV 173

>HEATR_CAEEL (Q23495) Hypothetical protein ZK430.1 in chromosome II|
          Length = 1650

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 15  ILQKGIGSKVVDMYKEAYDSIEIPKYVDTVTPRYKPKFDALLVELKEAEKTSLK 176
           ILQ+G+   + D  K+   +I        +  R+  +FDA+  ELK  +K +LK
Sbjct: 398 ILQEGMDGNIFDNKKKLKSNIR------AIGMRFAKQFDAIHAELKAKDKKTLK 445

>SMYD5_XENLA (Q6GPQ4) SET and MYND domain-containing protein 5|
          Length = 421

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +3

Query: 9   LGILQKGIGSKVVDMYKEAYDSIEIPKYVDTVTPRYKPKFDALLVEL-KEAEKTS 170
           +G   +GIG+  +  +  A D++E+P       PR + K DAL+ +L K+ EK +
Sbjct: 248 VGTNGQGIGTSSLSQWVHACDALELP-------PRDREKLDALIDQLYKDIEKVT 295

>BFR2_ASPFU (Q4WMI1) Protein bfr2|
          Length = 565

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
 Frame = +2

Query: 149 EGGREDISEGIRED-----------REGDC*NEGDEEKDQHNDSRRV 256
           EG  +D  +G  ED           +EGD   + DE++D+  D+R+V
Sbjct: 165 EGSEDDSEDGFDEDDMSGEFSSDDDQEGDEDGDDDEDEDEETDNRKV 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,676,956
Number of Sequences: 219361
Number of extensions: 1142079
Number of successful extensions: 3450
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3444
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)