| Clone Name | bags7p08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 274 bits (138), Expect = 3e-70 Identities = 277/322 (86%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 4 attgactgggaatactacagaaa-ggaatcggatcaaaagttgtggatatgtacaaggag 62 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||||||||| Sbjct: 302 attgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaa 361 Query: 63 gcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcggtataagcca 122 |||||||| |||||||| ||||| ||||| |||||||| || ||||||| ||| |||||| Sbjct: 362 gcttatgaaagcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagcca 421 Query: 123 aagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctctgaaggaatca 182 ||||||||||| ||| | || || |||| || ||||| ||| ||||||||||| ||| Sbjct: 422 aagtttgatgcgctgcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtca 481 Query: 183 gagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagatcagcacaatg 242 |||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||| Sbjct: 482 gagaggatagagaaggagcttgctgaattgcaggagatgaagaaaaatatcagcacaatg 541 Query: 243 acagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgagatg 302 |||||||| || |||||||| ||||| ||||| ||||| ||||||| |||||||| || Sbjct: 542 acagcagatgaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatc 601 Query: 303 cgtaacgattactggggatact 324 |||||||| ||||||| |||| Sbjct: 602 cgtaacgacaactggggctact 623
>dbj|AB110175.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 13YPG010 Length = 893 Score = 274 bits (138), Expect = 3e-70 Identities = 277/322 (86%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 4 attgactgggaatactacagaaa-ggaatcggatcaaaagttgtggatatgtacaaggag 62 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||||||||| Sbjct: 234 attgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaa 293 Query: 63 gcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcggtataagcca 122 |||||||| |||||||| ||||| ||||| |||||||| || ||||||| ||| |||||| Sbjct: 294 gcttatgaaagcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagcca 353 Query: 123 aagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctctgaaggaatca 182 ||||||||||| ||| | || || |||| || ||||| ||| ||||||||||| ||| Sbjct: 354 aagtttgatgcgctgcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtca 413 Query: 183 gagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagatcagcacaatg 242 |||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||| Sbjct: 414 gagaggatagagaaggagcttgctgaattgcaggagatgaagaaaaatatcagcacaatg 473 Query: 243 acagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgagatg 302 |||||||| || |||||||| ||||| ||||| ||||| ||||||| |||||||| || Sbjct: 474 acagcagatgaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatc 533 Query: 303 cgtaacgattactggggatact 324 |||||||| ||||||| |||| Sbjct: 534 cgtaacgacaactggggctact 555
>dbj|AK068050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131P20, full insert sequence Length = 927 Score = 274 bits (138), Expect = 3e-70 Identities = 277/322 (86%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 4 attgactgggaatactacagaaa-ggaatcggatcaaaagttgtggatatgtacaaggag 62 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||||||||| Sbjct: 302 attgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaa 361 Query: 63 gcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcggtataagcca 122 |||||||| |||||||| ||||| ||||| |||||||| || ||||||| ||| |||||| Sbjct: 362 gcttatgaaagcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagcca 421 Query: 123 aagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctctgaaggaatca 182 ||||||||||| ||| | || || |||| || ||||| ||| ||||||||||| ||| Sbjct: 422 aagtttgatgcgctgcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtca 481 Query: 183 gagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagatcagcacaatg 242 |||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||| Sbjct: 482 gagaggatagagaaggagcttgctgaattgcaggagatgaagaaaaatatcagcacaatg 541 Query: 243 acagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgagatg 302 |||||||| || |||||||| ||||| ||||| ||||| ||||||| |||||||| || Sbjct: 542 acagcagatgaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatc 601 Query: 303 cgtaacgattactggggatact 324 |||||||| ||||||| |||| Sbjct: 602 cgtaacgacaactggggctact 623
>gb|BT017299.1| Zea mays clone EL01N0316B09.c mRNA sequence Length = 778 Score = 256 bits (129), Expect = 6e-65 Identities = 276/321 (85%), Gaps = 3/321 (0%) Strand = Plus / Plus Query: 4 attgactgggaatactacagaaa-ggaatcggatcaaaagttgtggatatgtacaaggag 62 ||||| ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 212 attgattgggagtactacagaaaaggaattggatcaaaagtggtggatatgtacaaagag 271 Query: 63 gcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcggtataagcca 122 |||| ||| ||||| |||||||||||||| || ||||| || ||||| | ||| |||||| Sbjct: 272 gcttttgaaagcatcgagatcccgaagtacgtcgacacagttactccccagtacaagcca 331 Query: 123 aagtttgatgctctgttagtcgaattgaaggaggcagagaagacatc-tctgaaggaatc 181 |||||||||||| || | | ||||| |||||||| ||||| | | | || |||||| || Sbjct: 332 aagtttgatgctgtgattgctgaattaaaggaggctgagaa-agagcatcagaaggagtc 390 Query: 182 agagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagatcagcacaat 241 ||| |||||||||||||| ||||||||||| |||| |||| |||||||||||| ||||| Sbjct: 391 agaaaggatagagaaggaacttgctgaaatggaggaaatgaggaaaaagatcagtacaat 450 Query: 242 gacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgagat 301 ||||||||| || ||||||| |||| |||||||||||| |||||||||||| ||||| || Sbjct: 451 gacagcagatgattactttgagaagtaccctgaactcaggaagaagtttgacgatgaaat 510 Query: 302 gcgtaacgattactggggata 322 ||||||||| |||||||||| Sbjct: 511 ccgtaacgataactggggata 531
>ref|NM_115090.3| Arabidopsis thaliana unknown protein AT3G52300 transcript variant AT3G52300.1 mRNA, complete cds Length = 889 Score = 127 bits (64), Expect = 4e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| ||||||||||| || ||||| ||||||| || |||||| Sbjct: 358 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 417 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 418 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 477 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| || || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 478 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 537 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 538 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 597 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 598 tgacgaaatccgtaatgacaactggggatact 629
>gb|AY094036.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, complete cds Length = 507 Score = 127 bits (64), Expect = 4e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| ||||||||||| || ||||| ||||||| || |||||| Sbjct: 234 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 293 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 294 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 353 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| || || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 354 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 413 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 414 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 473 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 474 tgacgaaatccgtaatgacaactggggatact 505
>gb|AY050330.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, complete cds Length = 812 Score = 127 bits (64), Expect = 4e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| ||||||||||| || ||||| ||||||| || |||||| Sbjct: 309 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 368 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 369 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 428 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| || || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 429 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 488 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 489 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 548 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 549 tgacgaaatccgtaatgacaactggggatact 580
>emb|BX823984.1|CNS0A5JI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 712 Score = 127 bits (64), Expect = 4e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| ||||||||||| || ||||| ||||||| || |||||| Sbjct: 203 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 262 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 263 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 322 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| || || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 323 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 382 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 383 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 442 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 443 tgacgaaatccgtaatgacaactggggatact 474
>gb|AY086788.1| Arabidopsis thaliana clone 27681 mRNA, complete sequence Length = 789 Score = 127 bits (64), Expect = 4e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| ||||||||||| || ||||| ||||||| || |||||| Sbjct: 358 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 417 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 418 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 477 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| || || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 478 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 537 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 538 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 597 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 598 tgacgaaatccgtaatgacaactggggatact 629
>emb|AJ271469.1|ATH271469 Arabidopsis thaliana mRNA for mitochondrial F0 ATP synthase D chain (p_D gene) Length = 720 Score = 127 bits (64), Expect = 4e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| ||||||||||| || ||||| ||||||| || |||||| Sbjct: 213 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 272 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 273 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 332 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| || || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 333 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 392 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 393 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 452 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 453 tgacgaaatccgtaatgacaactggggatact 484
>emb|BX822199.1|CNS0A5TC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 777 Score = 111 bits (56), Expect = 2e-21 Identities = 218/272 (80%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||| | |||||| |||| || ||||| ||||||| || |||||| Sbjct: 279 gtacaaggaagcttatcacagcattaagattccaaagtacgttgacaaagttactcctga 338 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 339 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 398 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| || || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 399 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 458 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 459 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 518 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 519 tgacgaaatccgtaatgacaactggggatact 550
>emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, BAC clone T25B15 Length = 77350 Score = 99.6 bits (50), Expect = 9e-18 Identities = 89/102 (87%) Strand = Plus / Plus Query: 223 agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 282 |||||||| ||||||| ||||| ||||| |||||||||| ||||||||| |||||||| | Sbjct: 51527 agaaaaagctcagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaa 51586 Query: 283 agaagtttgatgatgagatgcgtaacgattactggggatact 324 ||||||||||||| || || ||||| || |||||||||||| Sbjct: 51587 agaagtttgatgacgaaatccgtaatgacaactggggatact 51628 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 73 gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 132 |||||||||| || ||||| ||||||| || |||||| || |||||||||||||||| Sbjct: 51163 gcattgagattccaaagtacgttgacaaagttactcctgaatacaagccaaagtttgatg 51222 Query: 133 ct 134 || Sbjct: 51223 ct 51224
>ref|NM_001035768.1| Arabidopsis thaliana unknown protein AT3G52300 transcript variant AT3G52300.2 mRNA, complete cds Length = 893 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 225 aaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaag 284 |||||| ||||||| ||||| ||||| |||||||||| ||||||||| |||||||| ||| Sbjct: 534 aaaaagctcagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaag 593 Query: 285 aagtttgatgatgagatgcgtaacgattactggggatact 324 ||||||||||| || || ||||| || |||||||||||| Sbjct: 594 aagtttgatgacgaaatccgtaatgacaactggggatact 633 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| ||||||||||| || ||||| ||||||| || |||||| Sbjct: 358 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 417 Query: 113 gtataagccaaagtttgatgct 134 || |||||||||||||||||| Sbjct: 418 atacaagccaaagtttgatgct 439
>emb|BX823132.1|CNS0A5WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 774 Score = 95.6 bits (48), Expect = 1e-16 Identities = 216/272 (79%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| |||||| |||| || ||||| ||||||| ||||||||| Sbjct: 274 gtacaaggacgcttatgacagcattaagattccaaagtacgttgacaaagtcactcctga 333 Query: 113 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 172 || |||||||||||||||||| |||| || ||| |||| || ||||| ||| ||| || Sbjct: 334 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 393 Query: 173 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 232 ||||| | || || | ||||| || |||||||| | | ||||| | |||||| | Sbjct: 394 caaggagtatgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagtt 453 Query: 233 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 292 |||||| ||||| | ||| |||||||||| |||| |||| | |||||| ||||||||||| Sbjct: 454 cagcaccatgactgtagatgagtactttgagaagaacccggtactcaaaaagaagtttga 513 Query: 293 tgatgagatgcgtaacgattactggggatact 324 ||| || || ||||| || |||||||||||| Sbjct: 514 tgacgaaatccgtaatgacaactggggatact 545
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 223 agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 282 ||||||| |||||||||||||||||||| || |||||||| ||||| ||||| ||||| Sbjct: 23572459 agaaaaatatcagcacaatgacagcagatgaatactttgcaaagcatcctgaggtcaagc 23572400 Query: 283 agaagtttgatgatgagatgcgtaacgattactggggatact 324 ||||||| |||||||| || |||||||| ||||||| |||| Sbjct: 23572399 agaagttcgatgatgaaatccgtaacgacaactggggctact 23572358 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 168 tctctgaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaag 224 ||||||||||| ||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 23572637 tctctgaaggagtcagagaggatagagaaggagcttgctgaattgcaggagatgaag 23572581 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 4 attgactgggaatactacagaaa-ggaatcggatcaaaagttgtggatatgtacaaggag 62 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||||||||| Sbjct: 23573948 attgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaa 23573889 Query: 63 gcttatga 70 |||||||| Sbjct: 23573888 gcttatga 23573881 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 73 gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 132 ||||||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||||| Sbjct: 23572886 gcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgatg 23572827 Query: 133 c 133 | Sbjct: 23572826 c 23572826
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 223 agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 282 ||||||| |||||||||||||||||||| || |||||||| ||||| ||||| ||||| Sbjct: 52234 agaaaaatatcagcacaatgacagcagatgaatactttgcaaagcatcctgaggtcaagc 52175 Query: 283 agaagtttgatgatgagatgcgtaacgattactggggatact 324 ||||||| |||||||| || |||||||| ||||||| |||| Sbjct: 52174 agaagttcgatgatgaaatccgtaacgacaactggggctact 52133 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 168 tctctgaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaag 224 ||||||||||| ||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 52412 tctctgaaggagtcagagaggatagagaaggagcttgctgaattgcaggagatgaag 52356 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 4 attgactgggaatactacagaaa-ggaatcggatcaaaagttgtggatatgtacaaggag 62 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||||||||| Sbjct: 53723 attgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaa 53664 Query: 63 gcttatga 70 |||||||| Sbjct: 53663 gcttatga 53656 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 73 gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 132 ||||||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||||| Sbjct: 52661 gcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgatg 52602 Query: 133 c 133 | Sbjct: 52601 c 52601
>gb|BT013973.1| Lycopersicon esculentum clone 133018R, mRNA sequence Length = 860 Score = 85.7 bits (43), Expect = 1e-13 Identities = 217/275 (78%) Strand = Plus / Plus Query: 51 atgtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcct 110 |||||||| || || ||||| |||||||||||||| |||| || ||||| || |||||| Sbjct: 293 atgtacaaagaagcctatgaaagcattgagatccccaagtttgaggacacagttactcct 352 Query: 111 cggtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatct 170 | || || || |||||||||||| |||| || ||| |||| || || |||||| |||| Sbjct: 353 caatacaaacccaagtttgatgctttgttggtggaactgaaagaagctgagaagcaatct 412 Query: 171 ctgaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaag 230 || ||||| || || || |||| ||||| |||| || | | ||| |||||||||| Sbjct: 413 ctcaaggagtctgaaagattagaaaaggaagttgccgaggtccaagagttgaagaaaaaa 472 Query: 231 atcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagttt 290 |||| || ||||||||||| || |||||||| ||||| || || | |||||||| ||| Sbjct: 473 ctcagtaccatgacagcagaagaatactttgcaaagcatcccgagttaaagaagaaattt 532 Query: 291 gatgatgagatgcgtaacgattactggggatacta 325 |||||||| || || ||||| |||||||| ||||| Sbjct: 533 gatgatgaaattcgaaacgactactggggctacta 567
>emb|BX822317.1|CNS0A5WN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 755 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 225 aaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaag 284 |||||| ||||||| ||||| | ||| ||||||||| ||||||||| |||||||| ||| Sbjct: 463 aaaaagctcagcaccatgactgaagataagtactttgagaagcacccggaactcaaaaag 522 Query: 285 aagtttgatgatgagatgcgtaacgattactggggatact 324 ||||||||||| || || ||||| || |||||||||||| Sbjct: 523 aagtttgatgacgaaatccgtaatgacaactggggatact 562 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 53 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 112 ||||||||| |||||||| |||||| |||| | ||||| ||||||| ||||||||| Sbjct: 291 gtacaaggaagcttatgacagcatttagatttcaaagtacgttgacaaagtcactcctga 350 Query: 113 gtataagccaaagtttgatgctctgtt 139 || |||||||||||||||||| |||| Sbjct: 351 atacaagccaaagtttgatgctttgtt 377
>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence Length = 121144 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 240 atgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgag 299 ||||||||||| ||||||||||| |||| ||||| || |||||||| |||||||||||| Sbjct: 95192 atgacagcagatgagtactttgccgagcatcctgagctaaagaagaaatttgatgatgag 95251 Query: 300 atgcgtaacgattactgggg 319 || | |||||| ||||||| Sbjct: 95252 attaggaacgataactgggg 95271 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 73 gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 132 ||||||||||||| |||| ||||||||| || ||||||| |||||||| || ||||||| Sbjct: 94857 gcattgagatccccaagtttgttgacacagtaactcctcaatataagcctaaatttgatg 94916 Query: 133 c 133 | Sbjct: 94917 c 94917
>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence Length = 142154 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 240 atgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgag 299 ||||||||||| ||||||||||| |||| ||||| || |||||||| |||||||||||| Sbjct: 95196 atgacagcagatgagtactttgccgagcatcctgagctaaagaagaaatttgatgatgag 95255 Query: 300 atgcgtaacgattactgggg 319 || | |||||| ||||||| Sbjct: 95256 attaggaacgataactgggg 95275 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 73 gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 132 ||||||||||||| |||| ||||||||| || ||||||| |||||||| || ||||||| Sbjct: 94861 gcattgagatccccaagtttgttgacacagtaactcctcaatataagcctaaatttgatg 94920 Query: 133 c 133 | Sbjct: 94921 c 94921
>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete sequence Length = 91755 Score = 54.0 bits (27), Expect = 5e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 223 agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 282 ||||||| |||| || ||||||||||| || |||||||| ||||| || || | |||| Sbjct: 61714 agaaaaaactcagtaccatgacagcagaagaatactttgcaaagcatcccgagttaaaga 61773 Query: 283 agaagtttgatgatgagatgcgtaacgattactggggatacta 325 |||| ||||||||||| || || || || |||||||| ||||| Sbjct: 61774 agaaatttgatgatgaaattcgaaatgactactggggctacta 61816
>emb|AJ843973.1| Plantago major mRNA for mitochondrial F0 ATP synthase delta chain (atp5 gene) Length = 803 Score = 48.1 bits (24), Expect = 0.028 Identities = 63/76 (82%) Strand = Plus / Plus Query: 220 tgaagaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactca 279 ||||||| ||| | ||||| |||||||| ||||||||||| || ||||| ||||| ||| Sbjct: 477 tgaagaacaaggttagcaccatgacagctgacgagtacttcgccaagcatcctgaggtca 536 Query: 280 agaagaagtttgatga 295 || |||| || ||||| Sbjct: 537 aggagaaattcgatga 552
>gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thaliana Clone T32B03 From Chromosome V, complete sequence Length = 96262 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 73 gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgat 131 |||||||||| || ||||| ||||||||||||| ||| || ||||||||||||||| Sbjct: 47062 gcattgagattcctaagtacgttgacactgtcattccgaaatacaagccaaagtttgat 47004
>dbj|AB046441.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:T15D5 Length = 75370 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 73 gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgat 131 |||||||||| || ||||| ||||||||||||| ||| || ||||||||||||||| Sbjct: 66234 gcattgagattcctaagtacgttgacactgtcattccgaaatacaagccaaagtttgat 66292
>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence Length = 215147 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 aaggagatgaagaaaaagatca 234 |||||||||||||||||||||| Sbjct: 85168 aaggagatgaagaaaaagatca 85147
>ref|NM_112685.3| Arabidopsis thaliana HON4; DNA binding AT3G18035 (HON4) mRNA, complete cds Length = 1903 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gaactcaagaagaagtttgat 293 ||||||||||||||||||||| Sbjct: 1298 gaactcaagaagaagtttgat 1318
>gb|AC134458.2| Mus musculus BAC clone RP23-358B17 from chromosome 18, complete sequence Length = 179314 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cttgttgaaattccaacataa 456 ||||||||||||||||||||| Sbjct: 63872 cttgttgaaattccaacataa 63852
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence Length = 176188 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 ttttactttctgttggacctt 486 ||||||||||||||||||||| Sbjct: 31414 ttttactttctgttggacctt 31394
>gb|AC016399.9| Homo sapiens chromosome 10 clone RP11-70E21, complete sequence Length = 173239 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 ttttactttctgttggacctt 486 ||||||||||||||||||||| Sbjct: 1260 ttttactttctgttggacctt 1280
>gb|BT006606.1| Arabidopsis thaliana At3g18035 mRNA, complete cds Length = 1443 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gaactcaagaagaagtttgat 293 ||||||||||||||||||||| Sbjct: 1132 gaactcaagaagaagtttgat 1152
>emb|BX823749.1|CNS0A6I9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1664 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gaactcaagaagaagtttgat 293 ||||||||||||||||||||| Sbjct: 1278 gaactcaagaagaagtttgat 1298
>gb|BT002434.1| Arabidopsis thaliana linker histone protein, putative (At3g18035) mRNA, complete cds Length = 1752 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gaactcaagaagaagtttgat 293 ||||||||||||||||||||| Sbjct: 1302 gaactcaagaagaagtttgat 1322
>dbj|AB026641.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBG14 Length = 6588 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gaactcaagaagaagtttgat 293 ||||||||||||||||||||| Sbjct: 5384 gaactcaagaagaagtttgat 5364
>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence Length = 183177 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 aggaatcagagaggatagaga 195 ||||||||||||||||||||| Sbjct: 80979 aggaatcagagaggatagaga 80999
>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence Length = 160193 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 catctctgaaggaatcagaga 186 ||||||||||||||||||||| Sbjct: 100904 catctctgaaggaatcagaga 100924
>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete sequence Length = 178741 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 catctctgaaggaatcagaga 186 ||||||||||||||||||||| Sbjct: 130328 catctctgaaggaatcagaga 130348
>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete sequence Length = 221351 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 catctctgaaggaatcagaga 186 ||||||||||||||||||||| Sbjct: 42653 catctctgaaggaatcagaga 42673
>ref|XM_428367.1| PREDICTED: Gallus gallus similar to chromosome 18 open reading frame 30 (LOC430817), partial mRNA Length = 692 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 gaaatgaaggagatgaagaaaaag 230 ||||||||| |||||||||||||| Sbjct: 101 gaaatgaagaagatgaagaaaaag 124
>gb|AC157096.9| Mus musculus 6 BAC RP24-369J3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175080 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 458 tctgatctttttactttctgttgg 481 |||||| ||||||||||||||||| Sbjct: 100432 tctgatttttttactttctgttgg 100455
>gb|AC093598.4| Homo sapiens BAC clone RP11-262F18 from 7, complete sequence Length = 50840 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cattgagatcccgaagtatgttga 97 ||||||||||| |||||||||||| Sbjct: 36896 cattgagatccagaagtatgttga 36873
>emb|CR848308.2| Xenopus tropicalis finished cDNA, clone TNeu048i23 Length = 1824 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 aattgaaggaggcagagaag 164 |||||||||||||||||||| Sbjct: 992 aattgaaggaggcagagaag 1011
>gb|AC121999.3| Mus musculus BAC clone RP24-318P16 from chromosome 8, complete sequence Length = 192510 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 atacttctttgtccctctgg 388 |||||||||||||||||||| Sbjct: 90284 atacttctttgtccctctgg 90265
>emb|Z46812.1|CEZK675 Caenorhabditis elegans Cosmid ZK675, complete sequence Length = 22703 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 gaatttcatcatccaaactt 407 |||||||||||||||||||| Sbjct: 12870 gaatttcatcatccaaactt 12889
>emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in linkage group 9, complete sequence Length = 292409 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gaagaagtttgatgatgaga 300 |||||||||||||||||||| Sbjct: 54656 gaagaagtttgatgatgaga 54675
>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence Length = 115348 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tgaaatgaaggagatgaaga 225 |||||||||||||||||||| Sbjct: 104244 tgaaatgaaggagatgaaga 104263
>emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100 Length = 340000 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 45734 aaatgaaggagaggaagaaaaaga 45757
>gb|AC148398.10| Medicago truncatula clone mth2-24c23, complete sequence Length = 123656 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaa 227 |||||||||||||||||||| Sbjct: 80363 aaatgaaggagatgaagaaa 80382
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ttctttgtccctctggaatttcat 396 |||||||||| ||||||||||||| Sbjct: 1806469 ttctttgtccatctggaatttcat 1806446
>emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 on chromosome 6q26-27 Contains a novel gene, the MAS1 oncogene, the 5' end of the IGF2R gene for insulin-like growth factor 2 receptor (cation-independent mannose-6 phosphate receptor, Insulin-like growth factor-2 receptor (mannose-6-phosphate receptor, cation-independent)) (MPRI, CD222, CIMPR, M6P-R) and two CpG islands, complete sequence Length = 129968 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 catctctgaaggaatcagag 185 |||||||||||||||||||| Sbjct: 122084 catctctgaaggaatcagag 122103
>emb|AL109810.13|HS1097F14 Human DNA sequence from clone RP5-1097F14 on chromosome 1q42.13-43 Contains a peptidylprolyl isomerase A (cyclophilin A) pseudogene (PPIA), the gene for a novel protein similar to tripartite motif-containing 9 (TRIM9), a novel gene and three CpG islands, complete sequence Length = 123657 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 agagaggatagagaaggaga 201 |||||||||||||||||||| Sbjct: 76916 agagaggatagagaaggaga 76897
>emb|AL049651.2|HSJ753D10 Human DNA sequence from clone RP4-753D10 on chromosome 20 Contains the SSTR4 gene for somatostatin receptor 4, the THBD gene for thrombomodulin, two novel genes and two CpG islands, complete sequence Length = 97912 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tgaaatgaaggagatgaagaaaaa 229 |||||||||||| ||||||||||| Sbjct: 13955 tgaaatgaaggaaatgaagaaaaa 13932
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ctcggtataagccaaagttt 128 |||||||||||||||||||| Sbjct: 5280886 ctcggtataagccaaagttt 5280867
>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21, complete sequence Length = 217310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 atcaaaagttgtggatatgt 54 |||||||||||||||||||| Sbjct: 33728 atcaaaagttgtggatatgt 33747
>emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 map 22q22.3, complete sequence Length = 192447 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 83015 aaatgaaggagaggaagaaaaaga 83038
>emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 map 22q22.3, complete sequence Length = 182974 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 136410 aaatgaaggagaggaagaaaaaga 136433
>emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in linkage group 21, complete sequence Length = 216476 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 atcaaaagttgtggatatgt 54 |||||||||||||||||||| Sbjct: 152208 atcaaaagttgtggatatgt 152189
>ref|XM_700803.1| PREDICTED: Danio rerio hypothetical protein LOC561174 (LOC561174), mRNA Length = 778 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gaagaagtttgatgatgaga 300 |||||||||||||||||||| Sbjct: 595 gaagaagtttgatgatgaga 614
>emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in linkage group 2, complete sequence Length = 155396 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tctgaaggaatcagagagga 189 |||||||||||||||||||| Sbjct: 150086 tctgaaggaatcagagagga 150067
>ref|XM_691529.1| PREDICTED: Danio rerio similar to Dual specificity testis-specific protein kinase 2 (Testicular protein kinase 2) (LOC568213), mRNA Length = 2022 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tctgaaggaatcagagagga 189 |||||||||||||||||||| Sbjct: 1766 tctgaaggaatcagagagga 1747
>gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3p, complete sequence Length = 193333 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 atgtacaaggaggcttatgatagcattg 78 ||||||||||| ||| |||||||||||| Sbjct: 136475 atgtacaaggatgctcatgatagcattg 136502
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 tctgatctttttactttctgttgg 481 ||||||||||| |||||||||||| Sbjct: 3450721 tctgatcttttgactttctgttgg 3450698
>gb|AC106053.6| Homo sapiens BAC clone RP11-818B6 from 2, complete sequence Length = 178810 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 384 tctggaatttcatcatccaaacttgtgt 411 ||||||||||||| || ||||||||||| Sbjct: 153984 tctggaatttcatgattcaaacttgtgt 153957
>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence Length = 179606 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tctttgtccctctggaattt 393 |||||||||||||||||||| Sbjct: 90548 tctttgtccctctggaattt 90567
>gb|AF478380.1| Vitis vinifera isolate 1R1 copia-like retrotransposon gag-pol polyprotein-like gene, partial sequence Length = 1348 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 aagatcagcacaatgacagcagacgagt 255 ||||||| ||||||||||||||| |||| Sbjct: 625 aagatcatcacaatgacagcagaagagt 652
>emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on chromosome 2, complete sequence Length = 161244 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcagagaggatagagaagga 199 |||||||||||||||||||| Sbjct: 153375 tcagagaggatagagaagga 153394
>dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-217F13, chromosome 3, complete sequence Length = 178968 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 66425 aaatgaaggagaggaagaaaaaga 66448
>dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-30J10, chromosome 3, complete sequence Length = 183435 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 161547 aaatgaaggagaggaagaaaaaga 161570
>dbj|AP006272.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-100O24, chromosome 22, complete sequence Length = 175178 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 105717 aaatgaaggagaggaagaaaaaga 105740
>gb|AC004982.1|AC004982 Homo sapiens PAC clone RP5-1159O4 from 7p21-p22, complete sequence Length = 130027 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 caacataactctgatctttttactttctgttg 480 |||||| ||||| ||||||||||| ||||||| Sbjct: 43682 caacattactcttatctttttactctctgttg 43651
>emb|AL049781.5|CNS00003 Human chromosome 14 DNA sequence BAC R-340L3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188165 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aaggagatgaagaaaaagat 232 |||||||||||||||||||| Sbjct: 87794 aaggagatgaagaaaaagat 87813
>gb|AC110519.13| Mus musculus chromosome 8, clone RP23-183M15, complete sequence Length = 217236 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 atacttctttgtccctctgg 388 |||||||||||||||||||| Sbjct: 213427 atacttctttgtccctctgg 213446
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 tctgatctttttactttctgttgg 481 ||||||||||| |||||||||||| Sbjct: 3450667 tctgatcttttgactttctgttgg 3450644
>emb|AL773602.1|HS314N7 Homo sapiens chromosome 21 from PAC RP1-314N7, map 21q22.3 Length = 121590 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 103910 aaatgaaggagaggaagaaaaaga 103933
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 458 tctgatctttttactttctgttgg 481 ||||||||||| |||||||||||| Sbjct: 81193 tctgatcttttgactttctgttgg 81216
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 tctgatctttttactttctgttgg 481 ||||||||||| |||||||||||| Sbjct: 129774 tctgatcttttgactttctgttgg 129751
>dbj|AP001068.1| Homo sapiens genomic DNA, chromosome 21, clone:KB877C8, MX1-D21S171 region, complete sequence Length = 120832 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaatgaaggagatgaagaaaaaga 231 |||||||||||| ||||||||||| Sbjct: 50565 aaatgaaggagaggaagaaaaaga 50588 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,551,447 Number of Sequences: 3902068 Number of extensions: 5551447 Number of successful extensions: 129807 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 129520 Number of HSP's gapped (non-prelim): 276 length of query: 511 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 488 effective length of database: 17,143,297,704 effective search space: 8365929279552 effective search space used: 8365929279552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)