ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8e14 |
|---|---|
| Clone Library Name | barley_pub |
>RSD1_YEAST (P32368) Recessive suppressor of secretory defect| Length = 623 Score = 115 bits (287), Expect(2) = 4e-27 Identities = 55/116 (47%), Positives = 75/116 (64%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAIS 337 TNC+DCLDRTNV QS++ + VL+ + + +V T TSY+ LWA++ DA+S Sbjct: 390 TNCMDCLDRTNVVQSVLAQWVLQKEFESADVVATGSTWEDNAPLLTSYQNLWADNADAVS 449 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDLLQGRY 505 + YSGT ALK DF R G+R+ G FND S +RYY NN+ DG +QD+ DL G + Sbjct: 450 VAYSGTGALKTDFTRTGKRTRLGAFNDFLNSASRYYQNNWTDGPRQDSYDLFLGGF 505 Score = 25.8 bits (55), Expect(2) = 4e-27 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = +3 Query: 3 VHFDFHRXCGHVHFERLSQLYEQIE 77 V+FDFH C + + R+ L + +E Sbjct: 333 VYFDFHHECRKMQWHRVKLLIDHLE 357
>YF51_SCHPO (O14127) Hypothetical protein C3C7.01c in chromosome I| Length = 611 Score = 114 bits (286), Expect = 1e-25 Identities = 55/111 (49%), Positives = 73/111 (65%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAIS 337 TNC+DCLDRTNV Q+ I + +L QL I V ++++ +Y +F ++++WAN GD IS Sbjct: 385 TNCMDCLDRTNVIQTSIAQFILNMQLHDIGVLSSSESLEEYDSFLQDFRLIWANTGDYIS 444 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDL 490 Y+GTPALKGD R+G R+ G F DL RY LNNF DG QD+ DL Sbjct: 445 DLYTGTPALKGDVTRHGTRTIFGAFKDLLNCFRRYILNNFFDGMLQDSYDL 495
>SYJ1_SCHPO (O43001) Synaptojanin homolog 1 (EC 3.1.3.36)| (Inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1076 Score = 95.5 bits (236), Expect = 9e-20 Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 3/120 (2%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPA---FDTSYKVLWANHGD 328 TNC+DCLDRTNV Q+++ R LE Q+ ++ T+ A F + +WAN+GD Sbjct: 417 TNCLDCLDRTNVIQNLVSRVFLE----QVMIY------TRQNAGYDFWQVHSTIWANNGD 466 Query: 329 AISIQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDLLQGRYI 508 A++ Y+GT ALK F R G+ S G NDL S+ R Y+NNF D +Q+ +DLL GR I Sbjct: 467 ALARIYTGTGALKSSFTRKGKLSIAGALNDLSKSVGRMYINNFQDKGRQETIDLLLGRLI 526
>YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 intergenic| region Length = 1183 Score = 84.3 bits (207), Expect(2) = 7e-17 Identities = 47/115 (40%), Positives = 64/115 (55%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAIS 337 TNC+DCLDRTN+ Q I V + L+ + + I F LWA++GD IS Sbjct: 444 TNCLDCLDRTNLIQQTISLAVFKLFLEDFRLVKPSSFIDDNE-FVQKVNALWADNGDQIS 502 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDLLQGR 502 Y+GT ALK + R G+ S G +D S++R Y+NNFVD KQ +D L G+ Sbjct: 503 QIYTGTNALKSSYSRKGKMSFSGALSDATKSVSRMYINNFVDKGKQQNIDTLLGK 557 Score = 21.9 bits (45), Expect(2) = 7e-17 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +3 Query: 9 FDFHRXCGHVHFERLSQLYEQIEDYLKKHRYFLLNEK 119 FDFHR F S++ +I + + YF + K Sbjct: 394 FDFHRETSQDGFAAASRIIPKIRNTILDAGYFSYDVK 430
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 75.9 bits (185), Expect = 8e-14 Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 1/131 (0%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAIS 337 TNC+DCLDRTN Q+ +G LE +Q+E G+ + F ++ +W+ +GD+IS Sbjct: 381 TNCLDCLDRTNSVQAFLG---LEMLTKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSIS 437 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMD-LLQGRYITS 514 Y+GT AL+G K D S++R NNF D +KQ+A+D LL G + S Sbjct: 438 KIYAGTGALEG----------KAKLKDGARSVSRTIQNNFFDSSKQEAIDVLLLGNTLNS 487 Query: 515 VSRDMAPPAKA 547 D+A A+A Sbjct: 488 ---DLADKARA 495
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 75.5 bits (184), Expect = 1e-13 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAIS 337 TNC+DCLDRTN Q+ +G LE +Q+E G+ + F ++ +W+ +GD+IS Sbjct: 381 TNCLDCLDRTNSVQAFLG---LEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSIS 437 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMD-LLQGRYITS 514 Y+GT AL+G K D S+ R NNF D +KQ+A+D LL G + S Sbjct: 438 KIYAGTGALEG----------KAKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNS 487 Query: 515 VSRDMAPPAKA 547 D+A A+A Sbjct: 488 ---DLADKARA 495
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 75.5 bits (184), Expect = 1e-13 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAIS 337 TNC+DCLDRTN Q+ +G LE +Q+E G+ + F ++ +W+ +GD+IS Sbjct: 381 TNCLDCLDRTNSVQAFLG---LEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSIS 437 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMD-LLQGRYITS 514 Y+GT AL+G K D S+ R NNF D +KQ+A+D LL G + S Sbjct: 438 KIYAGTGALEG----------KAKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNS 487 Query: 515 VSRDMAPPAKA 547 D+A A+A Sbjct: 488 ---DLADKARA 495
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 75.5 bits (184), Expect = 1e-13 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAIS 337 TNC+DCLDRTN Q+ +G LE +Q+E G+ + F ++ +W+ +GD+IS Sbjct: 381 TNCLDCLDRTNSVQAFLG---LEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSIS 437 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMD-LLQGRYITS 514 Y+GT AL+G K D S+ R NNF D +KQ+A+D LL G + S Sbjct: 438 KIYAGTGALEG----------KAKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNS 487 Query: 515 VSRDMAPPAKA 547 D+A A+A Sbjct: 488 ---DLADKARA 495
>FIG4_YEAST (P42837) Polyphosphoinositide phosphatase (EC 3.1.3.-)| (Phosphatidylinositol 3,5-bisphosphate 5-phosphatase) (Factor-induced gene 4) Length = 879 Score = 68.2 bits (165), Expect = 2e-11 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKV-LWANHGDAI 334 +NCIDCLDRTN Q +IG+R L QL+ + + I+++ +Y + + L+ + GD I Sbjct: 465 SNCIDCLDRTNAAQFVIGKRALGCQLKSLGI--IDNSYLEYDSDIVNILTELFHDLGDTI 522 Query: 335 SIQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDLLQGRY 505 ++QY G+ + D+ S+ R+Y N+FVD +QDA++L G Y Sbjct: 523 ALQYGGSHLVNTMETYRKINQWSSHSRDMIESIKRFYSNSFVDAQRQDAINLFLGHY 579
>SAC3_MOUSE (Q91WF7) SAC domain-containing protein 3| Length = 907 Score = 66.6 bits (161), Expect = 5e-11 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 6/120 (5%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTS----YKVLWANHG 325 TNC+DCLDRTN Q M+G+ L QL + G+ D FDT ++ L+ +HG Sbjct: 484 TNCVDCLDRTNTAQFMVGKCALAYQLYSL---GLIDKPNL--QFDTDAVRLFEELYEDHG 538 Query: 326 DAISIQYSGTPALKGDFVRYGERSAKGI--FNDLQYSLARYYLNNFVDGTKQDAMDLLQG 499 D +S+QY G+ + V+ + A D+ +L+RYY N F D +QD+++L G Sbjct: 539 DTLSLQYGGSQLVHR--VKTYRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINLFLG 596
>SAC3_HUMAN (Q92562) SAC domain-containing protein 3| Length = 907 Score = 66.6 bits (161), Expect = 5e-11 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 6/120 (5%) Frame = +2 Query: 158 TNCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTS----YKVLWANHG 325 TNC+DCLDRTN Q M+G+ L QL + G+ D FDT ++ L+ +HG Sbjct: 484 TNCVDCLDRTNTAQFMVGKCALAYQLYSL---GLIDKPNL--QFDTDAVRLFEELYEDHG 538 Query: 326 DAISIQYSGTPALKGDFVRYGERSAKGI--FNDLQYSLARYYLNNFVDGTKQDAMDLLQG 499 D +S+QY G+ + V+ + A D+ +L+RYY N F D +QD+++L G Sbjct: 539 DTLSLQYGGSQLVHR--VKTYRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINLFLG 596
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 65.9 bits (159), Expect = 8e-11 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Frame = +2 Query: 161 NCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGIND-TITKYPAFDTSYKVLWANHGDAIS 337 NC+DCLDRTN Q I VL QL+ + G+N IT F S+K +W+ +G +S Sbjct: 385 NCLDCLDRTNTVQCFIALEVLHLQLESL---GLNSKPIT--DRFVESFKAMWSLNGHGLS 439 Query: 338 IQYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDLL 493 ++G+ AL+G ++ G D S++R +NF DG KQ+A+ LL Sbjct: 440 KVFTGSRALEG-------KAKVGKLKDGARSMSRTIQSNFFDGVKQEAIKLL 484
>SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1434 Score = 65.9 bits (159), Expect = 8e-11 Identities = 40/111 (36%), Positives = 61/111 (54%) Frame = +2 Query: 161 NCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAISI 340 NC+DCLDRTN Q I VL QL+ + G+N F S+K +W+ +G ++S Sbjct: 385 NCLDCLDRTNTVQCFIALEVLHLQLESL---GLNSK-PIIDRFVESFKAMWSLNGHSLSK 440 Query: 341 QYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDLL 493 ++G+ AL+G ++ G D S++R +NF DG KQ+A+ LL Sbjct: 441 VFTGSRALEG-------KAKVGKLKDGARSMSRTIQSNFFDGVKQEAIKLL 484
>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 65.1 bits (157), Expect = 1e-10 Identities = 39/111 (35%), Positives = 61/111 (54%) Frame = +2 Query: 161 NCIDCLDRTNVTQSMIGRRVLESQLQQIEVFGINDTITKYPAFDTSYKVLWANHGDAISI 340 NC+DCLDRTN QS I VL QL+ + + + F S+K +W+ +G ++S Sbjct: 385 NCLDCLDRTNTVQSFIALEVLHLQLKTLGL----SSKPIVDRFVESFKAMWSLNGHSLSK 440 Query: 341 QYSGTPALKGDFVRYGERSAKGIFNDLQYSLARYYLNNFVDGTKQDAMDLL 493 ++G+ AL+G ++ G D S++R +NF DG KQ+A+ LL Sbjct: 441 VFTGSRALEG-------KAKVGKLKDGARSMSRTIQSNFFDGVKQEAIKLL 484
>MOK1_SCHPO (Q9USK8) Cell wall alpha-1,3-glucan synthase mok1 (EC 2.4.1.183)| Length = 2410 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +2 Query: 257 INDTITKYPAFDTSYKVLWANHGDAISIQYSGTPALKGDFVRYGERSAKGIFNDLQYSLA 436 + +T +YP F W G +SIQ+ G DF YG+ A G D Q L+ Sbjct: 226 VYNTSCEYPRF-------WGEDGGPVSIQFKG--CYVSDFDHYGDTEAFGSHPDWQRQLS 276 Query: 437 RY 442 ++ Sbjct: 277 KF 278
>IP6K3_MOUSE (Q8BWD2) Inositol hexaphosphate kinase 3 (EC 2.7.4.21) (InsP6| kinase 3) (Inositol hexakisphosphate kinase 3) Length = 396 Score = 31.2 bits (69), Expect = 2.2 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 10/64 (15%) Frame = -1 Query: 195 VTLVRSKQSIQFVXDSANLLPEFSHLSHSTGSTC--VSSDNP--------QFAHTTEKGA 46 +T++RS+ S +F S ++ + + GST V+S +P FAHTT KG+ Sbjct: 305 LTVIRSQSSYRFYSSSVLIIYDGEPPQTTQGSTSGGVTSGDPAKVDVRMIDFAHTTFKGS 364 Query: 45 RSEH 34 +EH Sbjct: 365 WNEH 368
>GH311_ORYSA (P0C0M3) Probable indole-3-acetic acid-amido synthetase GH3.11 (EC| 6.3.2.-) (Auxin-responsive GH3-like protein 11) (OsGH3-11) Length = 591 Score = 30.8 bits (68), Expect = 2.8 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -2 Query: 314 PTKLCSLYQKLDTWLLYR*YQKLLFVEVGSPELFSQSCSELHWYDLNN-----QYNLXLT 150 P S+Y +L L+ R + + S L S S E HW DL N Q N +T Sbjct: 193 PDSQQSMYCQLLCGLVERQHVLRIGAVFASAFLRSISFLEQHWRDLVNDIRIGQLNSSIT 252 Query: 149 VPTCXLNFLTFL 114 P C L L FL Sbjct: 253 SPACRLAMLNFL 264
>AFAM_RAT (P36953) Afamin precursor (Alpha-albumin) (Alpha-Alb)| Length = 608 Score = 29.3 bits (64), Expect = 8.2 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 Query: 466 DEAGCHGSSSRTLHHIC*SRHGTSSKSRICRE 561 D C S S+ +HHIC + SSK + C E Sbjct: 273 DVVQCIRSQSQVMHHICSKQDSISSKIKACCE 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,246,331 Number of Sequences: 219361 Number of extensions: 1520353 Number of successful extensions: 4498 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4339 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4477 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
