| Clone Name | bags8e14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009082.1| Triticum aestivum clone wkm1c.pk0004.c1:fis, full insert mRNA sequence Length = 1505 Score = 896 bits (452), Expect = 0.0 Identities = 542/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 1 atgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagt 60 ||||||||||||||||||||||| ||||||| ||||||||||| |||||||| || |||| Sbjct: 325 atgtgcattttgacttccatcgtatttgtggccatgttcactttgagcgcctctcacagt 384 Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaag 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 385 tgtatgagcaaattgaggattacctgaagaaacacaagtacttcctgttgaatgagaaag 444 Query: 121 gtgagaaaattcaggnagcaggttggcactgtcagnaacaaattgtattgattgtttaga 180 | ||||||||||||| ||||| | ||| |||||| || || |||||||||||||||||| Sbjct: 445 gcgagaaaattcagg-agcagctcggcgttgtcagaaataa-ttgtattgattgtttaga 502 Query: 181 tcgtaccaatgtaactcagagcatgattgggagaagagttctggagagccaacttcaaca 240 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 503 tcgtaccaatgtaactcagagcatgattgcgagaagaattctggagagccaacttcaaca 562 Query: 241 aatagaagtttttggtattaacgatacaataaccaagtatccagcttttgatacaagcta 300 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 563 aatagaagtttttggtgttaacgatacaataaccaagtatccagcttttgatgcaagcta 622 Query: 301 caaagttttgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 caaagttttgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 682 Query: 361 tttgaagggagattttgttcgatacggggagcgaagtgccaagggaattttcaatgatct 420 ||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||| Sbjct: 683 tttgaagggagattttgttcggtacgggaagcgaagtgcccggggaattttaaatgatct 742 Query: 421 ccagtattcacttgctagatactacttgaacaacttcgtagacgggacgaagcaggatgc 480 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 743 ccagtattcacttgctagatactacttgaacaacttcgcagatgggacgaagcaggatgc 802 Query: 481 catggatcttcttcaaggacgttacatcacatctgttagtcgagacatggcacctccagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 803 catggatcttcttcaaggacgttacatcacatctgttagtcgagacatggcacctccaac 862 Query: 541 aaaagcaggatttgtagagagctatgcgtc 570 |||||||||||||||||||||||||||||| Sbjct: 863 aaaagcaggatttgtagagagctatgcgtc 892
>ref|XM_466191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2423 Score = 357 bits (180), Expect = 3e-95 Identities = 474/570 (83%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 1 atgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagt 60 |||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||| Sbjct: 1264 atgtgcattttgacttccatcgaatctgtggtcatattcactttgagcgcctttctcagc 1323 Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaag 120 | || | |||||||| |||||||| |||||||| ||||| ||||| ||||||| |||| Sbjct: 1324 tctacaatcaaattgaagattatctcaagaaacataggtatttccttttgaatggtaaag 1383 Query: 121 gtgagaaaattcaggnagcaggttggcactgtcagnaacaaattgtattgattgtttaga 180 |||| |||||| ||| ||||| ||||||| |||| | |||||||| | ||||| ||||| Sbjct: 1384 gtgaaaaaattgagg-agcagactggcactatcagga-caaattgtgtcgattgcttaga 1441 Query: 181 tcgtaccaatgtaactcagagcatgattgggagaagagttctggagagccaacttcaaca 240 ||| |||||||||||||||||||||||||| ||| | || || | ||||||||| | Sbjct: 1442 tcgcaccaatgtaactcagagcatgattggaggaaagatactagaaaaccaacttcagcg 1501 Query: 241 aatagaagtttttggtattaacgatacaataaccaagtatccagcttttgatacaagcta 300 ||||| ||| | ||| |||| ||||| |||| ||| |||||||||||||| ||| || Sbjct: 1502 aataggggttctcggtgttaatgatacgataagcaaccatccagcttttgatgcaaaata 1561 Query: 301 caaagttttgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||||||| |||||||| ||||||||| ||||||| | ||||||||| |||||||| || Sbjct: 1562 caaagttttatgggccaaccatggagattcaataagcactcagtactctggaactccggc 1621 Query: 361 tttgaagggagattttgttcgatacggggagcgaagtgccaagggaattttcaatgatct 420 |||||||| ||||||||||| || ||| || ||||| || |||||||| | |||||||| Sbjct: 1622 attgaagggcgattttgttcggtatgggaagagaagtacccagggaattctgaatgatct 1681 Query: 421 ccagtattcacttgctagatactacttgaacaacttcgtagacgggacgaagcaggatgc 480 | ||||||||||||||||||||||||| ||||| | ||| || || || |||||||| Sbjct: 1682 gtggaattcacttgctagatactacttgaataactttgcagatggcactaaacaggatgc 1741 Query: 481 catggatcttcttcaaggacgttacatcacatctgttagtcgagacatggcacctccagc 540 ||||||||| |||||||||| |||||| | ||||||||| || ||||||||| |||| Sbjct: 1742 catggatctacttcaaggacattacattatatctgttagccgcgacatggcaggtccaag 1801 Query: 541 aaaagcaggatttgtagagagctatgcgtc 570 ||||||||| || |||||| |||||||| Sbjct: 1802 caaagcaggacttctagagaattatgcgtc 1831
>dbj|AK101886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070L24, full insert sequence Length = 2423 Score = 357 bits (180), Expect = 3e-95 Identities = 474/570 (83%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 1 atgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagt 60 |||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||| Sbjct: 1264 atgtgcattttgacttccatcgaatctgtggtcatattcactttgagcgcctttctcagc 1323 Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaag 120 | || | |||||||| |||||||| |||||||| ||||| ||||| ||||||| |||| Sbjct: 1324 tctacaatcaaattgaagattatctcaagaaacataggtatttccttttgaatggtaaag 1383 Query: 121 gtgagaaaattcaggnagcaggttggcactgtcagnaacaaattgtattgattgtttaga 180 |||| |||||| ||| ||||| ||||||| |||| | |||||||| | ||||| ||||| Sbjct: 1384 gtgaaaaaattgagg-agcagactggcactatcagga-caaattgtgtcgattgcttaga 1441 Query: 181 tcgtaccaatgtaactcagagcatgattgggagaagagttctggagagccaacttcaaca 240 ||| |||||||||||||||||||||||||| ||| | || || | ||||||||| | Sbjct: 1442 tcgcaccaatgtaactcagagcatgattggaggaaagatactagaaaaccaacttcagcg 1501 Query: 241 aatagaagtttttggtattaacgatacaataaccaagtatccagcttttgatacaagcta 300 ||||| ||| | ||| |||| ||||| |||| ||| |||||||||||||| ||| || Sbjct: 1502 aataggggttctcggtgttaatgatacgataagcaaccatccagcttttgatgcaaaata 1561 Query: 301 caaagttttgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||||||| |||||||| ||||||||| ||||||| | ||||||||| |||||||| || Sbjct: 1562 caaagttttatgggccaaccatggagattcaataagcactcagtactctggaactccggc 1621 Query: 361 tttgaagggagattttgttcgatacggggagcgaagtgccaagggaattttcaatgatct 420 |||||||| ||||||||||| || ||| || ||||| || |||||||| | |||||||| Sbjct: 1622 attgaagggcgattttgttcggtatgggaagagaagtacccagggaattctgaatgatct 1681 Query: 421 ccagtattcacttgctagatactacttgaacaacttcgtagacgggacgaagcaggatgc 480 | ||||||||||||||||||||||||| ||||| | ||| || || || |||||||| Sbjct: 1682 gtggaattcacttgctagatactacttgaataactttgcagatggcactaaacaggatgc 1741 Query: 481 catggatcttcttcaaggacgttacatcacatctgttagtcgagacatggcacctccagc 540 ||||||||| |||||||||| |||||| | ||||||||| || ||||||||| |||| Sbjct: 1742 catggatctacttcaaggacattacattatatctgttagccgcgacatggcaggtccaag 1801 Query: 541 aaaagcaggatttgtagagagctatgcgtc 570 ||||||||| || |||||| |||||||| Sbjct: 1802 caaagcaggacttctagagaattatgcgtc 1831
>gb|AY110592.1| Zea mays CL33432_1 mRNA sequence Length = 821 Score = 281 bits (142), Expect = 1e-72 Identities = 238/270 (88%) Strand = Plus / Minus Query: 263 gatacaataaccaagtatccagcttttgatacaagctacaaagttttgtgggccaatcat 322 |||||||||| ||| ||||||| |||||||||| ||||||| ||||||||||||||||| Sbjct: 806 gatacaataagcaaacatccagcctttgatacaaactacaaaattttgtgggccaatcat 747 Query: 323 ggagatgcaataagtattcagtactccggaactcctgctttgaagggagattttgttcga 382 |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 746 ggagatgcaataagcattcagtactctggaactcctgctctgaagggagattttgttcgg 687 Query: 383 tacggggagcgaagtgccaagggaattttcaatgatctccagtattcacttgctagatac 442 |||||| |||||| | | |||||||| | || ||| | | || |||||||||||||| Sbjct: 686 tacgggaagcgaactactcagggaattctaaacgatttgaggaatgcacttgctagatac 627 Query: 443 tacttgaacaacttcgtagacgggacgaagcaggatgccatggatcttcttcaaggacgt 502 |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||| | Sbjct: 626 tacttgaataacttcgttgatgggactaagcaggatgccatggatcttcttcaaggacat 567 Query: 503 tacatcacatctgttagtcgagacatggca 532 ||||| |||||||||||| |||| |||||| Sbjct: 566 tacatgacatctgttagtagagatatggca 537
>dbj|AK100215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044O16, full insert sequence Length = 2174 Score = 182 bits (92), Expect = 8e-43 Identities = 281/344 (81%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaactcagagcatgattgggagaag 216 |||||||||| | |||||| | |||||||| |||||||||||||||||||| ||||||| Sbjct: 1346 aacaaattgtgtcgattgtctggatcgtactaatgtaactcagagcatgatcgggagaaa 1405 Query: 217 agttctggagagccaacttcaacaaatagaagtttttggtattaacgatacaataaccaa 276 | | |||| |||||||| ||| |||| ||| ||||| ||| ||||||| | | | Sbjct: 1406 aatattggaaagccaactgcaaaaaatcagtgttcttggtgacaacaatacaatcagcga 1465 Query: 277 gtatccagcttttgatacaagctacaaagttttgtgggccaatcatggagatgcaataag 336 ||||| || |||||| || |||||||||||||||||||| ||||| ||||||||||| Sbjct: 1466 ttatccggcatttgatgcagattacaaagttttgtgggccaaccatggcgatgcaataag 1525 Query: 337 tattcagtactccggaactcctgctttgaagggagattttgttcgatacggggagcgaag 396 | ||||||||| ||||||||||| ||||||||||| ||||| || ||||| |||||| Sbjct: 1526 cactcagtactctggaactcctgccttgaagggagactttgtgcggtacggaaagcgaac 1585 Query: 397 tgccaagggaattttcaatgatctccagtattcacttgctagatactacttgaacaactt 456 | | |||||||||| |||||||| | || || | |||||||| ||| |||||||||| Sbjct: 1586 tacacagggaattttaaatgatctgtggaatgcaatggctagatattacctgaacaactt 1645 Query: 457 cgtagacgggacgaagcaggatgccatggatcttcttcaaggac 500 | ||| || || || |||||||||||||||||||||||||||| Sbjct: 1646 tgcagatggtactaaacaggatgccatggatcttcttcaaggac 1689 Score = 115 bits (58), Expect = 2e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 2 tgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagtt 61 |||||||||||||||||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 1193 tgtgcattttgacttccatcaaatctgtggtcatattcactttgaacgcctttctcaact 1252 Query: 62 gtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaagg 121 |||||| ||||||||||||||||| ||||| || ||||||||||| || ||| ||||| Sbjct: 1253 gtatgatcaaattgaggattatcttaagaagcataggtacttccttttaaatagtaaagg 1312 Query: 122 tgagaaaat 130 ||||||||| Sbjct: 1313 tgagaaaat 1321
>dbj|AK100761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119H14, full insert sequence Length = 2184 Score = 174 bits (88), Expect = 2e-40 Identities = 280/344 (81%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaactcagagcatgattgggagaag 216 |||||||||| | |||||| | |||||||| |||||||||||||||||||| ||||||| Sbjct: 1288 aacaaattgtgtcgattgtctggatcgtactaatgtaactcagagcatgatcgggagaaa 1347 Query: 217 agttctggagagccaacttcaacaaatagaagtttttggtattaacgatacaataaccaa 276 | | ||| |||||||| ||| |||| ||| ||||| ||| ||||||| | | | Sbjct: 1348 aatataggaaagccaactgcaaaaaatcagtgttcttggtgacaacaatacaatcagcga 1407 Query: 277 gtatccagcttttgatacaagctacaaagttttgtgggccaatcatggagatgcaataag 336 ||||| || |||||| || |||||||||||||||||||| ||||| ||||||||||| Sbjct: 1408 ttatccggcatttgatgcagattacaaagttttgtgggccaaccatggcgatgcaataag 1467 Query: 337 tattcagtactccggaactcctgctttgaagggagattttgttcgatacggggagcgaag 396 | ||||||||| ||||||||||| ||||||||||| ||||| || ||||| |||||| Sbjct: 1468 cactcagtactctggaactcctgccttgaagggagactttgtgcggtacggaaagcgaac 1527 Query: 397 tgccaagggaattttcaatgatctccagtattcacttgctagatactacttgaacaactt 456 | | |||||||||| |||||||| | || || | |||||||| ||| |||||||||| Sbjct: 1528 tacacagggaattttaaatgatctgtggaatgcaatggctagatattacctgaacaactt 1587 Query: 457 cgtagacgggacgaagcaggatgccatggatcttcttcaaggac 500 | ||| || || || |||||||||||||||||||||||||||| Sbjct: 1588 tgcagatggtactaaacaggatgccatggatcttcttcaaggac 1631 Score = 115 bits (58), Expect = 2e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 2 tgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagtt 61 |||||||||||||||||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 1135 tgtgcattttgacttccatcaaatctgtggtcatattcactttgaacgcctttctcaact 1194 Query: 62 gtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaagg 121 |||||| ||||||||||||||||| ||||| || ||||||||||| || ||| ||||| Sbjct: 1195 gtatgatcaaattgaggattatcttaagaagcataggtacttccttttaaatagtaaagg 1254 Query: 122 tgagaaaat 130 ||||||||| Sbjct: 1255 tgagaaaat 1263
>dbj|AK111831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128H24, full insert sequence Length = 1342 Score = 115 bits (58), Expect = 2e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 2 tgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagtt 61 |||||||||||||||||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 1135 tgtgcattttgacttccatcaaatctgtggtcatattcactttgaacgcctttctcaact 1194 Query: 62 gtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaagg 121 |||||| ||||||||||||||||| ||||| || ||||||||||| || ||| ||||| Sbjct: 1195 gtatgatcaaattgaggattatcttaagaagcataggtacttccttttaaatagtaaagg 1254 Query: 122 tgagaaaat 130 ||||||||| Sbjct: 1255 tgagaaaat 1263 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaactcagagcatgat 207 |||||||||| | |||||| | |||||||| |||||||||||||||||||| Sbjct: 1288 aacaaattgtgtcgattgtctggatcgtactaatgtaactcagagcatgat 1338
>gb|AY106702.1| Zea mays PCO105118 mRNA sequence Length = 609 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 471 agcaggatgccatggatcttcttcaaggacgttacatcacatctgttagtcgagacatgg 530 |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| Sbjct: 6 agcaggatgccatggatcttcttcaaggacataacatgacatctgttagtcgagacatgg 65 Query: 531 ca 532 || Sbjct: 66 ca 67
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Minus Query: 1 atgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagt 60 |||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||| Sbjct: 20945485 atgtgcattttgacttccatcgaatctgtggtcatattcactttgagcgcctttctcagc 20945426 Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggta 100 | || | |||||||| |||||||| |||||||| ||||| Sbjct: 20945425 tctacaatcaaattgaagattatctcaagaaacataggta 20945386 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaaggga 370 |||||||| ||||||||| ||||||| | ||||||||| |||||||| || |||||||| Sbjct: 20943760 tgggccaaccatggagattcaataagcactcagtactctggaactccggcattgaagggc 20943701 Query: 371 gattttgttcg 381 ||||||||||| Sbjct: 20943700 gattttgttcg 20943690 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 474 aggatgccatggatcttcttcaaggacgttacatcacatctgttagtcgagacatggca 532 |||||||||||||||| |||||||||| |||||| | ||||||||| || ||||||||| Sbjct: 20942745 aggatgccatggatctacttcaaggacattacattatatctgttagccgcgacatggca 20942687 Score = 65.9 bits (33), Expect = 1e-07 Identities = 88/104 (84%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 96 aggtacttcctgttgaatgagaaaggtgagaaaattcaggnagcaggttggcactgtcag 155 ||||| ||||| ||||||| |||||||| |||||| ||| ||||| ||||||| |||| Sbjct: 20944665 aggtatttccttttgaatggtaaaggtgaaaaaattgagg-agcagactggcactatcag 20944607 Query: 156 naacaaattgtattgattgtttagatcgtaccaatgtaactcag 199 | |||||||| | ||||| |||||||| ||||||||||||||| Sbjct: 20944606 ga-caaattgtgtcgattgcttagatcgcaccaatgtaactcag 20944564 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 393 gaagtgccaagggaattttcaatgatctccagtattcacttgctagatactacttgaaca 452 ||||| || |||||||| | |||||||| | ||||||||||||||||||||||||| | Sbjct: 20943108 gaagtacccagggaattctgaatgatctgtggaattcacttgctagatactacttgaata 20943049 Query: 453 actt 456 |||| Sbjct: 20943048 actt 20943045 Score = 40.1 bits (20), Expect = 7.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 229 ccaacttcaacaaatagaagtttttggtattaacgatacaataaccaagtatccagcttt 288 ||||||||| | ||||| ||| | ||| |||| ||||| |||| ||| |||||||||| Sbjct: 20943944 ccaacttcagcgaataggggttctcggtgttaatgatacgataagcaaccatccagcttt 20943885 Query: 289 tgatacaagctacaaagttt 308 |||| ||| |||||||||| Sbjct: 20943884 tgatgcaaaatacaaagttt 20943865
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Minus Query: 1 atgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagt 60 |||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||| Sbjct: 68957 atgtgcattttgacttccatcgaatctgtggtcatattcactttgagcgcctttctcagc 68898 Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggta 100 | || | |||||||| |||||||| |||||||| ||||| Sbjct: 68897 tctacaatcaaattgaagattatctcaagaaacataggta 68858 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaaggga 370 |||||||| ||||||||| ||||||| | ||||||||| |||||||| || |||||||| Sbjct: 67232 tgggccaaccatggagattcaataagcactcagtactctggaactccggcattgaagggc 67173 Query: 371 gattttgttcg 381 ||||||||||| Sbjct: 67172 gattttgttcg 67162 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 474 aggatgccatggatcttcttcaaggacgttacatcacatctgttagtcgagacatggca 532 |||||||||||||||| |||||||||| |||||| | ||||||||| || ||||||||| Sbjct: 66217 aggatgccatggatctacttcaaggacattacattatatctgttagccgcgacatggca 66159 Score = 65.9 bits (33), Expect = 1e-07 Identities = 88/104 (84%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 96 aggtacttcctgttgaatgagaaaggtgagaaaattcaggnagcaggttggcactgtcag 155 ||||| ||||| ||||||| |||||||| |||||| ||| ||||| ||||||| |||| Sbjct: 68137 aggtatttccttttgaatggtaaaggtgaaaaaattgagg-agcagactggcactatcag 68079 Query: 156 naacaaattgtattgattgtttagatcgtaccaatgtaactcag 199 | |||||||| | ||||| |||||||| ||||||||||||||| Sbjct: 68078 ga-caaattgtgtcgattgcttagatcgcaccaatgtaactcag 68036 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 393 gaagtgccaagggaattttcaatgatctccagtattcacttgctagatactacttgaaca 452 ||||| || |||||||| | |||||||| | ||||||||||||||||||||||||| | Sbjct: 66580 gaagtacccagggaattctgaatgatctgtggaattcacttgctagatactacttgaata 66521 Query: 453 actt 456 |||| Sbjct: 66520 actt 66517 Score = 40.1 bits (20), Expect = 7.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 229 ccaacttcaacaaatagaagtttttggtattaacgatacaataaccaagtatccagcttt 288 ||||||||| | ||||| ||| | ||| |||| ||||| |||| ||| |||||||||| Sbjct: 67416 ccaacttcagcgaataggggttctcggtgttaatgatacgataagcaaccatccagcttt 67357 Query: 289 tgatacaagctacaaagttt 308 |||| ||| |||||||||| Sbjct: 67356 tgatgcaaaatacaaagttt 67337
>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0066C04, complete sequence Length = 133944 Score = 95.6 bits (48), Expect = 2e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 2 tgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagtt 61 |||||||||||||||||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 56286 tgtgcattttgacttccatcaaatctgtggtcatattcactttgaacgcctttctcaact 56345 Query: 62 gtatgagcaaattgaggattatctgaagaaacacaggta 100 |||||| ||||||||||||||||| ||||| || ||||| Sbjct: 56346 gtatgatcaaattgaggattatcttaagaagcataggta 56384 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 309 tgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaagg 368 |||||||||| ||||| ||||||||||| | ||||||||| ||||||||||| ||||||| Sbjct: 60058 tgtgggccaaccatggcgatgcaataagcactcagtactctggaactcctgccttgaagg 60117 Query: 369 gagattttgt 378 |||| ||||| Sbjct: 60118 gagactttgt 60127 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 474 aggatgccatggatcttcttcaaggac 500 ||||||||||||||||||||||||||| Sbjct: 61027 aggatgccatggatcttcttcaaggac 61053 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaactcag 199 |||||||||| | |||||| | |||||||| |||||||||||| Sbjct: 57346 aacaaattgtgtcgattgtctggatcgtactaatgtaactcag 57388
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 95.6 bits (48), Expect = 2e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 2 tgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagtt 61 |||||||||||||||||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 11691440 tgtgcattttgacttccatcaaatctgtggtcatattcactttgaacgcctttctcaact 11691381 Query: 62 gtatgagcaaattgaggattatctgaagaaacacaggta 100 |||||| ||||||||||||||||| ||||| || ||||| Sbjct: 11691380 gtatgatcaaattgaggattatcttaagaagcataggta 11691342 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 309 tgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaagg 368 |||||||||| ||||| ||||||||||| | ||||||||| ||||||||||| ||||||| Sbjct: 11687668 tgtgggccaaccatggcgatgcaataagcactcagtactctggaactcctgccttgaagg 11687609 Query: 369 gagattttgt 378 |||| ||||| Sbjct: 11687608 gagactttgt 11687599 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 474 aggatgccatggatcttcttcaaggac 500 ||||||||||||||||||||||||||| Sbjct: 11686699 aggatgccatggatcttcttcaaggac 11686673 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaactcag 199 |||||||||| | |||||| | |||||||| |||||||||||| Sbjct: 11690380 aacaaattgtgtcgattgtctggatcgtactaatgtaactcag 11690338
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 95.6 bits (48), Expect = 2e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 2 tgtgcattttgacttccatcgtntttgtggtcatgttcacttcgagcgcctttctcagtt 61 |||||||||||||||||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 11770629 tgtgcattttgacttccatcaaatctgtggtcatattcactttgaacgcctttctcaact 11770570 Query: 62 gtatgagcaaattgaggattatctgaagaaacacaggta 100 |||||| ||||||||||||||||| ||||| || ||||| Sbjct: 11770569 gtatgatcaaattgaggattatcttaagaagcataggta 11770531 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 309 tgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaagg 368 |||||||||| ||||| ||||||||||| | ||||||||| ||||||||||| ||||||| Sbjct: 11766857 tgtgggccaaccatggcgatgcaataagcactcagtactctggaactcctgccttgaagg 11766798 Query: 369 gagattttgt 378 |||| ||||| Sbjct: 11766797 gagactttgt 11766788 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 474 aggatgccatggatcttcttcaaggac 500 ||||||||||||||||||||||||||| Sbjct: 11765888 aggatgccatggatcttcttcaaggac 11765862 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaactcag 199 |||||||||| | |||||| | |||||||| |||||||||||| Sbjct: 11769569 aacaaattgtgtcgattgtctggatcgtactaatgtaactcag 11769527
>ref|XM_643531.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (419.t00004) partial mRNA Length = 3021 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaa 194 ||||||||||||||||||||||||| | || ||||||| Sbjct: 1098 aacaaattgtattgattgtttagatagaacaaatgtaa 1135
>ref|XM_646763.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (144.t00014) partial mRNA Length = 3021 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagatcgtaccaatgtaa 194 ||||||||||||||||||||||||| | || ||||||| Sbjct: 1098 aacaaattgtattgattgtttagatagaacaaatgtaa 1135
>ref|XM_647628.1| Entamoeba histolytica HM-1:IMSS phosphoinositide phosphatase, putative (107.t00004) partial mRNA Length = 2997 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagat 181 ||||||||||||||||||||||||| Sbjct: 1083 aacaaattgtattgattgtttagat 1107
>ref|XM_718457.1| Candida albicans SC5314 polyphosphoinositide phosphatase (CaO19_4865), mRNA Length = 1857 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaatgt 192 |||||||| ||||||||||||||||| ||||| Sbjct: 1144 aattgtatggattgtttagatcgtacaaatgt 1175
>ref|XM_718268.1| Candida albicans SC5314 polyphosphoinositide phosphatase (CaO19_12329), mRNA Length = 1857 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaatgt 192 |||||||| ||||||||||||||||| ||||| Sbjct: 1144 aattgtatggattgtttagatcgtacaaatgt 1175
>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13 Length = 94349 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 95 caggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||||| ||||||||||| || ||||||||||| Sbjct: 41575 caggtactttctgttgaatgaaaagggtgagaaaat 41610 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||| |||||||| |||| ||| || ||||||||||| || |||||||| Sbjct: 41963 tgggctaatcatggtgatgaaatcagcattcagtactctggtactcctgc 42012
>ref|NM_125999.1| Arabidopsis thaliana ATSAC1B/IBS2; phosphoinositide 5-phosphatase AT5G66020 (ATSAC1B/IBS2) mRNA, complete cds Length = 1650 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 308 ttgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaag 367 |||||||| ||||| || |||| || || |||||||||||||| |||||||| | || Sbjct: 1276 ttgtgggctaatcacggtgatgacattagcattcagtactccggcactcctgcacttaaa 1335 Query: 368 ggagattttgt 378 ||||||||||| Sbjct: 1336 ggagattttgt 1346 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaag 120 |||||||||| || ||||||| || ||||| || ||||||| |||||||||| || | Sbjct: 1031 tgtatgagcagatggaggatttcctcgagaaaaacgggtactttttgttgaatgaaaagg 1090 Query: 121 gtgagaaaat 130 |||||||||| Sbjct: 1091 gtgagaaaat 1100
>gb|AY227249.1| Arabidopsis thaliana SAC domain protein 6 (SAC6) mRNA, complete cds Length = 1782 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 308 ttgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaag 367 |||||||| ||||| || |||| || || |||||||||||||| |||||||| | || Sbjct: 1324 ttgtgggctaatcacggtgatgacattagcattcagtactccggcactcctgcacttaaa 1383 Query: 368 ggagattttgt 378 ||||||||||| Sbjct: 1384 ggagattttgt 1394 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaag 120 |||||||||| || ||||||| || ||||| || ||||||| |||||||||| || | Sbjct: 1079 tgtatgagcagatggaggatttcctcgagaaaaacgggtactttttgttgaatgaaaagg 1138 Query: 121 gtgagaaaat 130 |||||||||| Sbjct: 1139 gtgagaaaat 1148
>gb|AF266458.1| Arabidopsis thaliana SAC1-like protein AtSAC1b mRNA, complete cds Length = 1782 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 308 ttgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaag 367 |||||||| ||||| || |||| || || |||||||||||||| |||||||| | || Sbjct: 1324 ttgtgggctaatcacggtgatgacattagcattcagtactccggcactcctgcacttaaa 1383 Query: 368 ggagattttgt 378 ||||||||||| Sbjct: 1384 ggagattttgt 1394 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaag 120 |||||||||| || ||||||| || ||||| || ||||||| |||||||||| || | Sbjct: 1079 tgtatgagcagatggaggatttcctcgagaaaaacgggtactttttgttgaatgaaaagg 1138 Query: 121 gtgagaaaat 130 |||||||||| Sbjct: 1139 gtgagaaaat 1148
>ref|NM_115005.2| Arabidopsis thaliana phosphoinositide 5-phosphatase AT3G51460 mRNA, complete cds Length = 2082 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||| |||||||| |||| ||| || ||||||||||| || |||||||| Sbjct: 1427 tgggctaatcatggtgatgaaatcagcattcagtactctggtactcctgc 1476 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||| ||||||||||| || ||||||||||| Sbjct: 1215 ggtactttctgttgaatgaaaagggtgagaaaat 1248
>ref|XM_638977.1| Dictyostelium discoideum hypothetical protein (DDB0167752), partial mRNA Length = 4317 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaat 190 |||||| | ||||||||||||||||||||| Sbjct: 2833 aattgtttggattgtttagatcgtaccaat 2862
>gb|DQ447110.1| Arabidopsis thaliana clone pENTR221-At5g66020 phosphoinositide phosphatase family protein (At5g66020) mRNA, complete cds Length = 1792 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 309 tgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaagg 368 ||||||| ||||| || |||| || || |||||||||||||| |||||||| | || | Sbjct: 1409 tgtgggctaatcacggtgatgacattagcattcagtactccggcactcctgcacttaaag 1468 Query: 369 gagattttgt 378 |||||||||| Sbjct: 1469 gagattttgt 1478 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 61 tgtatgagcaaattgaggattatctgaagaaacacaggtacttcctgttgaatgagaaag 120 |||||||||| || ||||||| || ||||| || ||||||| |||||||||| || | Sbjct: 1079 tgtatgagcagatggaggatttcctcgagaaaaacgggtactttttgttgaatgaaaagg 1138 Query: 121 gtgagaaaat 130 |||||||||| Sbjct: 1139 gtgagaaaat 1148
>gb|AY227250.1| Arabidopsis thaliana SAC domain protein 7 (SAC7) mRNA, complete cds Length = 1794 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||| |||||||| |||| ||| || ||||||||||| || |||||||| Sbjct: 1333 tgggctaatcatggtgatgaaatcagcattcagtactctggtactcctgc 1382 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||| ||||||||||| || ||||||||||| Sbjct: 1121 ggtactttctgttgaatgaaaagggtgagaaaat 1154
>gb|AY040078.1| Arabidopsis thaliana unknown protein (At3g51460) mRNA, complete cds Length = 1794 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||| |||||||| |||| ||| || ||||||||||| || |||||||| Sbjct: 1333 tgggctaatcatggtgatgaaatcagcattcagtactctggtactcctgc 1382 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||| ||||||||||| || ||||||||||| Sbjct: 1121 ggtactttctgttgaatgaaaagggtgagaaaat 1154
>gb|AF360267.1| Arabidopsis thaliana unknown protein (At3g51460) mRNA, complete cds Length = 2101 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||| |||||||| |||| ||| || ||||||||||| || |||||||| Sbjct: 1427 tgggctaatcatggtgatgaaatcagcattcagtactctggtactcctgc 1476 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||| ||||||||||| || ||||||||||| Sbjct: 1215 ggtactttctgttgaatgaaaagggtgagaaaat 1248
>gb|AF266459.1| Arabidopsis thaliana SAC1-like protein AtSAC1c mRNA, complete cds Length = 1794 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||| |||||||| |||| ||| || ||||||||||| || |||||||| Sbjct: 1333 tgggctaatcatggtgatgaaatcagcattcagtactctggtactcctgc 1382 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||| ||||||||||| || ||||||||||| Sbjct: 1121 ggtactttctgttgaatgaaaagggtgagaaaat 1154
>ref|XM_394455.2| PREDICTED: Apis mellifera similar to Protein KIAA0274 (LOC410980), mRNA Length = 2806 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagatcgtac 186 ||||||||| ||||||||||||||||||| Sbjct: 1564 aacaaattgcgttgattgtttagatcgtac 1593
>emb|BX822326.1|CNS0A60F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB29ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2060 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||| ||||||||||| || ||||||||||| Sbjct: 1193 ggtactttctgttgaatgaaaagggtgagaaaat 1226
>emb|BX824362.1|CNS0A5KW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1971 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 311 tgggccaatcatggagatgcaataagtattcagtactccggaactcctgc 360 ||||| |||||||| |||| ||| || ||||||||||| || |||||||| Sbjct: 1410 tgggctaatcatggtgatgaaatcagcattcagtactctggtactcctgc 1459 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||| ||||||||||| || ||||||||||| Sbjct: 1198 ggtactttctgttgaatgaaaagggtgagaaaat 1231
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence Length = 405682 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaat 190 |||||| | ||||||||||||||||||||| Sbjct: 399241 aattgtttggattgtttagatcgtaccaat 399270
>dbj|AB011474.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A18 Length = 79899 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Minus Query: 309 tgtgggccaatcatggagatgcaataagtattcagtactccggaactcctgctttgaagg 368 ||||||| ||||| || |||| || || |||||||||||||| |||||||| | || | Sbjct: 18472 tgtgggctaatcacggtgatgacattagcattcagtactccggcactcctgcacttaaag 18413 Query: 369 gagattttgt 378 |||||||||| Sbjct: 18412 gagattttgt 18403 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 95 caggtacttcctgttgaatgagaaaggtgagaaaat 130 ||||||||| |||||||||| || ||||||||||| Sbjct: 18849 caggtactttttgttgaatgaaaagggtgagaaaat 18814
>gb|AC136424.1| Homo sapiens chromosome 5 clone CTD-2363C16, complete sequence Length = 93767 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 481 catggatcttcttcaaggacgttaca 506 ||||||||||||| |||||||||||| Sbjct: 36521 catggatcttcttaaaggacgttaca 36496
>dbj|AP007299.1| Lotus japonicus genomic DNA, clone:LjT30I08, TM0492, complete sequence Length = 106844 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 106 tgttgaatgagaaaggtgagaaaatt 131 |||| ||||||||||||||||||||| Sbjct: 19147 tgttcaatgagaaaggtgagaaaatt 19172
>gb|AC008640.6| Homo sapiens chromosome 5 clone CTB-17P2, complete sequence Length = 153596 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 481 catggatcttcttcaaggacgttaca 506 ||||||||||||| |||||||||||| Sbjct: 7644 catggatcttcttaaaggacgttaca 7619
>ref|XM_673973.1| Plasmodium berghei strain ANKA hypothetical protein (PB000002.01.0) partial mRNA Length = 1854 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagat 181 ||||||||||||||||||||| Sbjct: 1612 aattgtattgattgtttagat 1632
>ref|XM_661896.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40021) partial mRNA Length = 2514 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagat 181 ||||||||||||||||||| ||||| Sbjct: 1641 aacaaattgtattgattgtctagat 1665
>emb|AL359392.9| Human DNA sequence from clone RP11-332E3 on chromosome 13 Contains the 3' end of the LMO7 gene for LIM domain only 7(KIAA0858) and a novel gene, complete sequence Length = 150488 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aacttcaacaaatagaagttt 251 ||||||||||||||||||||| Sbjct: 32275 aacttcaacaaatagaagttt 32295
>emb|AL121901.20|HSBA49G10 Human DNA sequence from clone RP11-49G10 on chromosome 20 Contains the C20orf70 gene, the SOCS2P1 gene for suppressor of cytokine signalling 2 pseudogene 1, a novel gene, the C20orf71 gene, the PLUNC gene for palate, lung and nasal epithelium carcinoma associated, the 5' end of the C20orf114 gene encoding a protein similar to murine von ebner minor salivary gland protein, the RPL12P3 gene for ribosomal protein L12 pseudogene 3, the gene for breast cancer and salivary gland expression protein (BASE) and a CpG island, complete sequence Length = 161593 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tgaggattatctgaagaaaca 94 ||||||||||||||||||||| Sbjct: 47905 tgaggattatctgaagaaaca 47885
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 atggatcttcttcaaggacgt 502 ||||||||||||||||||||| Sbjct: 272254 atggatcttcttcaaggacgt 272234
>gb|AC090666.6| Homo sapiens chromosome 18, clone RP11-116K4, complete sequence Length = 185255 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gaatgagaaaggtgagaaaat 130 ||||||||||||||||||||| Sbjct: 55492 gaatgagaaaggtgagaaaat 55512
>gb|AC012100.7| Homo sapiens chromosome 15 clone RP11-507J18 map 15q21.1, complete sequence Length = 195068 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 tatctgaagaaacacaggtacttcc 105 |||||||||| |||||||||||||| Sbjct: 83144 tatctgaagacacacaggtacttcc 83120
>ref|XM_625618.1| Cryptosporidium parvum Iowa II Sac1p family protein (cgd4_80), partial mRNA Length = 2511 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 aacaaattgtattgattgtttagat 181 ||||||||||||||||||| ||||| Sbjct: 1638 aacaaattgtattgattgtctagat 1662
>emb|BX294126.10| Zebrafish DNA sequence from clone DKEYP-35B8 in linkage group 2, complete sequence Length = 179476 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 gaagtgccaagggaattttcaatga 417 ||||||||||||||||||| ||||| Sbjct: 33072 gaagtgccaagggaatttttaatga 33096
>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence Length = 180568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gaatgagaaaggtgagaaaat 130 ||||||||||||||||||||| Sbjct: 162097 gaatgagaaaggtgagaaaat 162117
>gb|AC138528.8| Mus musculus chromosome 3, clone RP23-329L9, complete sequence Length = 188290 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cgcctttctcagttgtatgag 68 ||||||||||||||||||||| Sbjct: 149548 cgcctttctcagttgtatgag 149528
>emb|AL929116.4| Zebrafish DNA sequence from clone CH211-193C7, complete sequence Length = 126123 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 gaagtgccaagggaattttcaatga 417 ||||||||||||||||||| ||||| Sbjct: 110718 gaagtgccaagggaatttttaatga 110742
>ref|XM_630539.1| Dictyostelium discoideum hypothetical protein (DDB0219574), partial mRNA Length = 5154 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaatgt 192 ||||| || ||||||||||||||||| ||||| Sbjct: 1186 aattgcatcgattgtttagatcgtacaaatgt 1217
>ref|XM_519234.1| PREDICTED: Pan troglodytes similar to Cleavage and polyadenylation specificity factor, 30 kDa subunit (CPSF 30 kDa subunit) (NS1 effector domain-binding protein 1) (Neb-1) (No arches homolog) (LOC463572), mRNA Length = 855 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 659 tgattgggagaagagttctg 640
>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence Length = 147125 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tccagcttttgatacaagct 299 |||||||||||||||||||| Sbjct: 14651 tccagcttttgatacaagct 14632
>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence Length = 161996 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tgagaaaggtgagaaaattc 132 |||||||||||||||||||| Sbjct: 59053 tgagaaaggtgagaaaattc 59034
>ref|NM_006693.1| Homo sapiens cleavage and polyadenylation specific factor 4, 30kDa (CPSF4), mRNA Length = 1717 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 680 tgattgggagaagagttctg 661
>emb|Z83220.1|CEC34B7 Caenorhabditis elegans Cosmid C34B7, complete sequence Length = 22720 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaatgt 192 |||||| |||||||| | |||||||||||||| Sbjct: 9453 aattgtgttgattgtcttgatcgtaccaatgt 9484
>ref|XM_445522.1| Candida glabrata CBS138, CAGL0D02464g partial mRNA Length = 2616 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 acaaattgtattgattgtttagat 181 |||||||||||||||||| ||||| Sbjct: 1438 acaaattgtattgattgtctagat 1461
>gb|AC127411.3| Mus musculus BAC clone RP23-60E24 from chromosome 5, complete sequence Length = 217636 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 178972 tgattgggagaagagttctg 178991
>ref|XM_845056.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 30 kDa subunit (CPSF 30 kDa subunit) (NS1 effector domain-binding protein 1) (Neb-1) (No arches homolog), transcript variant 2 (LOC489859), mRNA Length = 938 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 769 tgattgggagaagagttctg 750
>gb|BC057067.1| Mus musculus cleavage and polyadenylation specific factor 4, mRNA (cDNA clone MGC:67409 IMAGE:5689404), complete cds Length = 2992 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 1968 tgattgggagaagagttctg 1949
>gb|AC074269.8| Homo sapiens 3 BAC RP11-485H21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182853 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 attgaggattatctgaagaa 91 |||||||||||||||||||| Sbjct: 59190 attgaggattatctgaagaa 59209
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 acaaattgtattgattgtttagat 181 |||||||||||||||||| ||||| Sbjct: 251842 acaaattgtattgattgtctagat 251865
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 agcatgattgggagaagagt 219 |||||||||||||||||||| Sbjct: 57922 agcatgattgggagaagagt 57941
>gb|AC022507.26| Homo sapiens 12 BAC RP11-25J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 tgagcaaattgaggattatctgaa 88 |||| ||||||||||||||||||| Sbjct: 52708 tgaggaaattgaggattatctgaa 52685
>emb|CR622877.1| full-length cDNA clone CS0DC011YL01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1449 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 443 tgattgggagaagagttctg 424
>gb|AC073063.12| Homo sapiens BAC clone RP11-136B3 from 7, complete sequence Length = 84113 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 64439 tgattgggagaagagttctg 64458
>gb|AC093648.4| Homo sapiens BAC clone RP11-360A10 from 4, complete sequence Length = 84761 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 ttcaaggacgttacatcacatctg 515 ||||||||||||| |||||||||| Sbjct: 31152 ttcaaggacgttagatcacatctg 31175
>gb|AC095048.3| Homo sapiens BAC clone RP11-239A9 from 4, complete sequence Length = 123661 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gtacttcctgttgaatgaga 117 |||||||||||||||||||| Sbjct: 75314 gtacttcctgttgaatgaga 75295
>emb|CR542161.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0424D for gene CPSF4, cleavage and polyadenylation specific factor 4, 30kDa; complete cds, without stopcodon Length = 807 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 644 tgattgggagaagagttctg 625
>ref|NM_060117.3| Caenorhabditis elegans F30A10.6 (F30A10.6) mRNA, complete cds Length = 1896 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaatgt 192 ||||| || |||||| |||||||||||||||| Sbjct: 1225 aattgcatggattgtctagatcgtaccaatgt 1256
>ref|NM_059865.3| Caenorhabditis elegans C34B7.2 (C34B7.2) mRNA, complete cds Length = 2863 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaatgt 192 |||||| |||||||| | |||||||||||||| Sbjct: 1384 aattgtgttgattgtcttgatcgtaccaatgt 1415
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 agcatgattgggagaagagt 219 |||||||||||||||||||| Sbjct: 20327289 agcatgattgggagaagagt 20327308
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aagaaacacaggtacttcct 106 |||||||||||||||||||| Sbjct: 11501182 aagaaacacaggtacttcct 11501201
>emb|AL935166.14| Zebrafish DNA sequence from clone CH211-199C19 in linkage group 1, complete sequence Length = 121976 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gaatgagaaaggtgagaaaa 129 |||||||||||||||||||| Sbjct: 32729 gaatgagaaaggtgagaaaa 32748
>gb|AC146422.4| Pan troglodytes BAC clone RP43-27K9 from chromosome 7, complete sequence Length = 189507 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 143375 tgattgggagaagagttctg 143356
>gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete sequence Length = 155873 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gtacttcctgttgaatgaga 117 |||||||||||||||||||| Sbjct: 135759 gtacttcctgttgaatgaga 135740
>gb|AC078820.28| Homo sapiens 12 BAC RP11-114H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164812 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 tgagcaaattgaggattatctgaa 88 |||| ||||||||||||||||||| Sbjct: 145792 tgaggaaattgaggattatctgaa 145815
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aagaaacacaggtacttcct 106 |||||||||||||||||||| Sbjct: 55316 aagaaacacaggtacttcct 55335
>dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12, map 22, complete sequences Length = 202014 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gattgggagaagagttctggagag 228 |||||||||||||| ||||||||| Sbjct: 31862 gattgggagaagagatctggagag 31839
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aagaaacacaggtacttcct 106 |||||||||||||||||||| Sbjct: 115171 aagaaacacaggtacttcct 115190
>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete sequence Length = 307443 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 tgagaaaggtgagaaaattc 132 |||||||||||||||||||| Sbjct: 303592 tgagaaaggtgagaaaattc 303611
>gb|U79569.1|HSU79569 Human no arches (nar) mRNA, complete cds Length = 1717 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattgggagaagagttctg 223 |||||||||||||||||||| Sbjct: 680 tgattgggagaagagttctg 661
>emb|CT009609.1| Desulfococcus multivorans vrl island Length = 89210 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggatcttcttcaaggacgtt 503 |||||||||||||||||||| Sbjct: 39505 ggatcttcttcaaggacgtt 39486
>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete sequence Length = 217148 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gaggattatctgaagaaacacagg 98 ||||||||||| |||||||||||| Sbjct: 147424 gaggattatcttaagaaacacagg 147447
>emb|Z81072.1|CEF30A10 Caenorhabditis elegans Cosmid F30A10, complete sequence Length = 37170 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 aattgtattgattgtttagatcgtaccaatgt 192 ||||| || |||||| |||||||||||||||| Sbjct: 18119 aattgcatggattgtctagatcgtaccaatgt 18150
>emb|BX511074.10| Zebrafish DNA sequence from clone CH211-123D3 in linkage group 19, complete sequence Length = 87054 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ttcaacaaatagaagttttt 253 |||||||||||||||||||| Sbjct: 8775 ttcaacaaatagaagttttt 8794 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,906,485 Number of Sequences: 3902068 Number of extensions: 4906485 Number of successful extensions: 85751 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85419 Number of HSP's gapped (non-prelim): 327 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)