| Clone Name | bags8e11 |
|---|---|
| Clone Library Name | barley_pub |
>DUT_XYLFT (Q87F19) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 155 Score = 32.3 bits (72), Expect = 0.88 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = +3 Query: 315 IKVTKPRLGLIWPLQVYGSVALRNSMGRKASYLFRCTKDSCQTLTQKDPFLRLTG 479 IK+ PRLG +WPL Y + A A R D+ TL D L TG Sbjct: 10 IKILDPRLGTVWPLPTYATEA-------SAGLDLRAALDAPMTLVPGDAELLSTG 57
>GATA5_HUMAN (Q9BWX5) Transcription factor GATA-5 (GATA-binding factor 5)| Length = 397 Score = 31.2 bits (69), Expect = 2.0 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%) Frame = -2 Query: 350 PDETQSWF-GDFDGEELHGSPGK 285 PD QSW G FDG LHG PG+ Sbjct: 148 PDVAQSWTAGPFDGSVLHGLPGR 170
>ADEN_ADEM1 (P30202) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa| protein) Length = 204 Score = 30.4 bits (67), Expect = 3.3 Identities = 17/49 (34%), Positives = 21/49 (42%) Frame = +2 Query: 248 FSFPRRCSSSKYSSQEIHAALLHQSHQTKIGSHLATAGLWLCCFEELYG 394 F + R S SS L +SHQT G H A GL+ F +G Sbjct: 85 FEYERLLKRSAVSSSSSKCVTLVKSHQTVQGPHSAACGLFCVLFLAAFG 133
>DUT_XYLFA (Q9PGZ6) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 155 Score = 30.0 bits (66), Expect = 4.4 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = +3 Query: 297 SMQLFSIKVTKPRLGLIWPLQVYGSVALRNSMGRKASYLFRCTKDSCQTLTQKDPFLRLT 476 ++Q IK+ PRLG +W L Y + A A R D+ TL D L T Sbjct: 4 AVQPLQIKILDPRLGTVWLLPTYATEA-------SAGLDLRAALDAPMTLVPGDAELLST 56 Query: 477 G 479 G Sbjct: 57 G 57
>FA9_CHICK (Q804X6) Coagulation factor IX precursor (EC 3.4.21.22) (Christmas| factor) [Contains: Coagulation factor IXa light chain; Coagulation factor IXa heavy chain] Length = 471 Score = 30.0 bits (66), Expect = 4.4 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Frame = +1 Query: 262 SMQFFKILFPGDPCSSSPSKSPN--QDWVSSGHC 357 +M+F+KI GD C+S+P K+ +D VSS C Sbjct: 77 TMEFWKIYIDGDQCNSNPCKNGAVCKDGVSSYEC 110
>AOX1_CANAL (O93853) Alternative oxidase 1, mitochondrial precursor (EC| 1.-.-.-) Length = 379 Score = 29.6 bits (65), Expect = 5.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -2 Query: 491 GTRWAC*AQKWILLSEGLAAILGASEEIAGFTSH 390 GTRW +KW+ L +I G +AGF H Sbjct: 162 GTRWEMTEEKWMTRCIFLESIAGVPGSVAGFVRH 195
>RYR1_RABIT (P11716) Ryanodine receptor 1 (Skeletal muscle-type ryanodine| receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release channel) Length = 5037 Score = 29.3 bits (64), Expect = 7.5 Identities = 28/116 (24%), Positives = 49/116 (42%) Frame = +3 Query: 66 PEMELSDSELAGVKSYREYIELTEKKEEQLRKDCEIKDKGTYGEQEIEEHXXXXXXXXXX 245 PE E S S + ++S E + L +KKEE+ ++ ++K QE+ H Sbjct: 2053 PEEETSLS--SRLRSLLETVRLVKKKEEKPEEELPAEEKKPQSLQELVSHMVVRWAQEDY 2110 Query: 246 XXXXXVDAVLQNTLPRRSMQLFSIKVTKPRLGLIWPLQVYGSVALRNSMGRKASYL 413 + + + L R+ L + PR I P V +++L +G+ S L Sbjct: 2111 VQSPELVRAMFSLLHRQYDGLGELLRALPRAYTISPSSVEDTMSLLECLGQIRSLL 2166
>HRP1_SCHPO (Q9US25) Chromodomain helicase hrp1 (EC 3.6.1.-) (ATP-dependent| helicase hrp1) Length = 1373 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 135 EKKEEQLRKDCEIKDKGTYGEQEIEE 212 +KKEE+ + E +GT GE E+EE Sbjct: 1247 KKKEEETNRGDETSPEGTVGEDEVEE 1272
>PLA2R_BOVIN (P49259) 180 kDa secretory phospholipase A2 receptor precursor| (PLA2-R) Length = 1463 Score = 28.9 bits (63), Expect = 9.7 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = -2 Query: 446 EGLAAILG---ASEEIAGFTSHRVPQSNRAINLQWPDETQSWFGDFDGEELHGSPGKSIL 276 E L +LG ASE G +SH++P ++ +W + + F ++ E H P +S L Sbjct: 423 EFLVTLLGDENASETWIGLSSHKIP-----VSFEWSNGSSVTFTNWHTLEPHIFPNRSQL 477 Query: 275 KNCIDAGRRTG 243 C+ A + G Sbjct: 478 --CVSAEQSEG 486
>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)| (Ik3-1) Length = 568 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 Query: 282 YFEELHRRGKENGRNKRTCCFYCV 211 YFE+L RGK N +N++ C CV Sbjct: 479 YFEKLALRGKLNKQNRKLCAGACV 502 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,959,038 Number of Sequences: 219361 Number of extensions: 1531142 Number of successful extensions: 4721 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4540 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4718 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)