ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8e02 |
|---|---|
| Clone Library Name | barley_pub |
>XYLA_HORVU (Q40082) Xylose isomerase (EC 5.3.1.5)| Length = 479 Score = 346 bits (888), Expect = 2e-95 Identities = 160/163 (98%), Positives = 160/163 (98%) Frame = +2 Query: 92 QETCPADIGAKCGDAASDDWEGEFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKD 271 QETCPADIGAKC DAASDDWEGEFFPGI KINYEGPTSKKPLSYKWYNAEEVILGKKMKD Sbjct: 24 QETCPADIGAKCTDAASDDWEGEFFPGIDKINYEGPTSKKPLSYKWYNAEEVILGKKMKD 83 Query: 272 WLRFSVAFWHTFRGTGGDPFGAPTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCF 451 W RFSVAFWHTFRGTGGDPFGAPTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCF Sbjct: 84 WFRFSVAFWHTFRGTGGDPFGAPTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCF 143 Query: 452 HDRDIAPDGKTLAETNANLDEIVELAKQLQSETNIKPLWGTAQ 580 HDRDIAPDGKTLAETNANLDEIVELAKQLQSETNIKPLWGTAQ Sbjct: 144 HDRDIAPDGKTLAETNANLDEIVELAKQLQSETNIKPLWGTAQ 186
>XYLA_ARATH (Q9FKK7) Xylose isomerase (EC 5.3.1.5)| Length = 472 Score = 280 bits (717), Expect = 2e-75 Identities = 124/161 (77%), Positives = 142/161 (88%) Frame = +2 Query: 98 TCPADIGAKCGDAASDDWEGEFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWL 277 TCPAD+G KC D SDDW+G+FFP I KI YEGP+SK PL+Y+WYNAEE ILGKKMKDW Sbjct: 26 TCPADLGGKCSD--SDDWQGDFFPEIPKIKYEGPSSKNPLAYRWYNAEEEILGKKMKDWF 83 Query: 278 RFSVAFWHTFRGTGGDPFGAPTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHD 457 RFSVAFWHTFRGTGGDPFGA TK WPWEDGTNS++MAKRRM+A+FEF++KLGV+ WCFHD Sbjct: 84 RFSVAFWHTFRGTGGDPFGAATKYWPWEDGTNSVSMAKRRMRANFEFLKKLGVDWWCFHD 143 Query: 458 RDIAPDGKTLAETNANLDEIVELAKQLQSETNIKPLWGTAQ 580 RDIAPDG TL E+N NLDE++ELAK+LQ + IKPLWGTAQ Sbjct: 144 RDIAPDGTTLEESNKNLDEVIELAKELQKGSKIKPLWGTAQ 184
>XYLA_BACTN (Q8A9M2) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 172 bits (437), Expect = 5e-43 Identities = 78/140 (55%), Positives = 103/140 (73%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 EFFPGI KI +EG SK P+++++Y+AE+VI GKKMKDWLRF++A+WHT GGD FG Sbjct: 5 EFFPGIEKIKFEGKDSKNPMAFRYYDAEKVINGKKMKDWLRFAMAWWHTLCAEGGDQFGG 64 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 TK +PW +++ AK +M A FEFM+K+G+E +CFHD D+ +G ++ E ANL EI Sbjct: 65 GTKQFPWNGNADAIQAAKDKMDAGFEFMQKMGIEYYCFHDVDLVSEGASVEEYEANLKEI 124 Query: 518 VELAKQLQSETNIKPLWGTA 577 V AKQ Q+ET IK LWGTA Sbjct: 125 VAYAKQKQAETGIKLLWGTA 144
>XYLA_THENE (P45687) Xylose isomerase (EC 5.3.1.5)| Length = 444 Score = 166 bits (419), Expect = 6e-41 Identities = 78/140 (55%), Positives = 100/140 (71%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 EFFP I K+ +EG S PL++K+Y+ EE+I GK +KD L+FSVAFWHTF G DPFG Sbjct: 3 EFFPEIPKVQFEGKESTNPLAFKFYDPEEIIDGKPLKDHLKFSVAFWHTFVNEGRDPFGD 62 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 PT + PW T+ + A R+ A FEF EKL +E +CFHDRDIAP+GKTL ETN LD++ Sbjct: 63 PTADRPWNRYTDPMDKAFARVDALFEFCEKLNIEYFCFHDRDIAPEGKTLRETNKILDKV 122 Query: 518 VELAKQLQSETNIKPLWGTA 577 VE K+ ++N+K LWGTA Sbjct: 123 VERIKERMKDSNVKLLWGTA 142
>XYLA_THEET (P22842) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 162 bits (411), Expect = 5e-40 Identities = 75/140 (53%), Positives = 97/140 (69%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 E+F + +I YEGP S P ++K+YN +E+I GK +K+ LRFSVA+WHTF G DPFGA Sbjct: 2 EYFKNVPQIKYEGPKSNNPYAFKFYNPDEIIDGKPLKEHLRFSVAYWHTFTANGTDPFGA 61 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 PT PW+ T+ + +AK R++A FE EKL V +CFHDRDIAP+G+TL ETN NLD I Sbjct: 62 PTMQRPWDHFTDPMDIAKARVEAAFELFEKLDVPFFCFHDRDIAPEGETLRETNKNLDTI 121 Query: 518 VELAKQLQSETNIKPLWGTA 577 V + K + K LWGTA Sbjct: 122 VAMIKDYLKTSKTKVLWGTA 141
>XYLA_THEMA (Q9X1Z5) Xylose isomerase (EC 5.3.1.5)| Length = 444 Score = 161 bits (408), Expect = 1e-39 Identities = 77/140 (55%), Positives = 98/140 (70%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 EFFP I KI +EG S PL++++Y+ EVI GK +KD L+FSVAFWHTF G DPFG Sbjct: 3 EFFPEIPKIQFEGKESTNPLAFRFYDPNEVIDGKPLKDHLKFSVAFWHTFVNEGRDPFGD 62 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 PT PW ++ + A R+ A FEF EKL +E +CFHDRDIAP+GKTL ETN LD++ Sbjct: 63 PTAERPWNRFSDPMDKAFARVDALFEFCEKLNIEYFCFHDRDIAPEGKTLRETNKILDKV 122 Query: 518 VELAKQLQSETNIKPLWGTA 577 VE K+ ++N+K LWGTA Sbjct: 123 VERIKERMKDSNVKLLWGTA 142
>XYLA_THEYO (Q9KGU2) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 159 bits (401), Expect = 7e-39 Identities = 73/140 (52%), Positives = 96/140 (68%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 E+F + K+ YEGP S P ++K+YN +E+I GK +K+ LRF+VA+WHTF GTG DPFGA Sbjct: 2 EYFKNVPKVQYEGPKSNNPYAFKFYNPDEIIDGKPLKEHLRFAVAYWHTFTGTGTDPFGA 61 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T PW+ ++ + +AK R++A FEF EKL V +CFHDRDIAP+G L ETN NL I Sbjct: 62 STMQRPWDRFSDPMDIAKARVEAAFEFFEKLDVPFFCFHDRDIAPEGDNLRETNKNLGTI 121 Query: 518 VELAKQLQSETNIKPLWGTA 577 V + K + K LWGTA Sbjct: 122 VAMIKDYLKTSKAKVLWGTA 141
>XYLA_RHOBA (Q7UVG2) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 157 bits (397), Expect = 2e-38 Identities = 69/138 (50%), Positives = 94/138 (68%) Frame = +2 Query: 164 FPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPT 343 FP + I YEGP S PL+++WYN +EVI GK MKD +RFS+ +WHTFRGTG DPFG T Sbjct: 4 FPDVPVIQYEGPQSDNPLAFRWYNPDEVIEGKTMKDHMRFSIVYWHTFRGTGADPFGPGT 63 Query: 344 KNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVE 523 PW++G+ S+ A++R FE KL + +HDRD+AP+G L ET+ANLD + + Sbjct: 64 AVRPWDNGSESVENAQKRAVVAFELFTKLQAPYYAWHDRDVAPEGANLRETHANLDAVAD 123 Query: 524 LAKQLQSETNIKPLWGTA 577 + ++ Q T +K LWGTA Sbjct: 124 VLEEQQKATGVKLLWGTA 141
>XYLA_THESA (P30435) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 157 bits (396), Expect = 3e-38 Identities = 73/140 (52%), Positives = 94/140 (67%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 ++F ++KI YEGP S P S+K+YN EEVI GK M++ LRFS+A+WHTF G D FG Sbjct: 3 KYFENVSKIKYEGPKSNNPYSFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGK 62 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T PW T+ + +AKRR++A FEF +K+ +CFHDRDIAP+G TL ETN NLD I Sbjct: 63 ATMQRPWNHYTDPMDIAKRRVEAAFEFFDKINAPFFCFHDRDIAPEGDTLRETNKNLDTI 122 Query: 518 VELAKQLQSETNIKPLWGTA 577 V + K + K LWGTA Sbjct: 123 VAMIKDYLKTSKTKVLWGTA 142
>XYLA_THETU (P19148) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 155 bits (391), Expect = 1e-37 Identities = 72/140 (51%), Positives = 93/140 (66%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 ++F ++KI YEGP S P S+K+YN EEVI GK M++ LRFS+A+WHTF G D FG Sbjct: 3 KYFENVSKIKYEGPKSNNPYSFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGK 62 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T PW T+ + +AK R++A FEF +K+ +CFHDRDIAP+G TL ETN NLD I Sbjct: 63 ATMQRPWNHYTDPMDIAKARVEAAFEFFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTI 122 Query: 518 VELAKQLQSETNIKPLWGTA 577 V + K + K LWGTA Sbjct: 123 VAMIKDYLKTSKTKVLWGTA 142
>XYLA1_XANCP (Q8P9T9) Xylose isomerase 1 (EC 5.3.1.5)| Length = 446 Score = 154 bits (389), Expect = 2e-37 Identities = 70/140 (50%), Positives = 95/140 (67%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 E+FPGI KI +EG S PL++K Y+A + + GK M + LRF+VA+WH+F G G DPFG Sbjct: 11 EYFPGIGKIGFEGRDSDNPLAFKVYDANKQVAGKSMAEHLRFAVAYWHSFCGNGADPFGP 70 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T+ +PW+ G +LA A+ + A FEF KLGV +CFHD D+APD + E NL + Sbjct: 71 GTRAYPWDVGNTALARAEAKSDAAFEFFTKLGVPYYCFHDIDLAPDADDIGEYENNLKHM 130 Query: 518 VELAKQLQSETNIKPLWGTA 577 V +AKQ Q++T +K LWGTA Sbjct: 131 VRIAKQRQADTGVKLLWGTA 150
>XYLA2_XANCP (Q8P3H1) Xylose isomerase 2 (EC 5.3.1.5)| Length = 446 Score = 153 bits (386), Expect = 4e-37 Identities = 70/140 (50%), Positives = 95/140 (67%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 E+FPGI KI +EG S PL++K Y+A + + GK M + LRF+VA+WH+F G G DPFG Sbjct: 11 EYFPGIGKIGFEGRDSDNPLAFKVYDANKQVAGKTMAEHLRFAVAYWHSFCGNGADPFGP 70 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T+ +PW+ G +LA A+ + A FEF KLGV +CFHD D+APD + E NL + Sbjct: 71 GTRAYPWDVGNTALARAEAKSDAAFEFFTKLGVPYYCFHDIDLAPDADDIGEYENNLKHM 130 Query: 518 VELAKQLQSETNIKPLWGTA 577 V +AKQ Q++T +K LWGTA Sbjct: 131 VGIAKQRQADTGVKLLWGTA 150
>XYLA_BACHD (Q9K993) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 152 bits (384), Expect = 7e-37 Identities = 71/139 (51%), Positives = 93/139 (66%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 FF + K+ YEGP S P ++K+YN EE++ GK M + LRFS+A+WHTF G G DPFG Sbjct: 3 FFNDVEKVQYEGPRSTNPYAFKYYNPEEIVAGKTMAEHLRFSIAYWHTFVGDGSDPFGVG 62 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T PW D + + +AK R++A FEF EKL V +CFHD D+AP+G+TLA+T NLDEIV Sbjct: 63 TMQRPW-DQYSGMDLAKARVEAAFEFFEKLNVPYFCFHDVDVAPEGETLADTYKNLDEIV 121 Query: 521 ELAKQLQSETNIKPLWGTA 577 + K + K LW TA Sbjct: 122 LMIKDYMKTSKTKLLWNTA 140
>XYLA_CLOTS (P29441) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 151 bits (382), Expect = 1e-36 Identities = 71/140 (50%), Positives = 93/140 (66%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 ++F ++KI YEGP S P ++K+YN EEVI GK M++ LRFS+A+WHTF G D FG Sbjct: 3 KYFEKVSKIKYEGPKSNNPYAFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGK 62 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T PW T+ + +AK R++A FEF +K+ +CFHDRDIAP+G TL ETN NLD I Sbjct: 63 ATMQRPWNHLTDPMDIAKARVEAAFEFFDKINAPFFCFHDRDIAPEGDTLRETNKNLDII 122 Query: 518 VELAKQLQSETNIKPLWGTA 577 V + K + K LWGTA Sbjct: 123 VAMIKDYLKTSKTKVLWGTA 142
>XYLA2_XANAC (Q8PEW5) Xylose isomerase 2 (EC 5.3.1.5)| Length = 445 Score = 147 bits (372), Expect = 2e-35 Identities = 69/140 (49%), Positives = 94/140 (67%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 E+FPGI KI +EG S PL++K Y+A + I K M + LRF+VA+WH+F G G DPFG Sbjct: 11 EYFPGIGKIGFEGRDSDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGP 70 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T+ +PW+ G +L A+ + A FEF KLGV +CFHD D++PD + E +NL + Sbjct: 71 GTRAYPWDVGDTALNRAEAKADAAFEFFTKLGVPYYCFHDIDLSPDADDITEYESNLKHM 130 Query: 518 VELAKQLQSETNIKPLWGTA 577 V +AKQ Q++T IK LWGTA Sbjct: 131 VGVAKQRQADTGIKLLWGTA 150
>XYLA_AGRT5 (Q8U7G6) Xylose isomerase (EC 5.3.1.5)| Length = 436 Score = 147 bits (371), Expect = 2e-35 Identities = 70/139 (50%), Positives = 91/139 (65%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 FF IAKI YEGP S PL+++ YN +E++ GK+M+D LRF+VA+WHTF GGDPFG Sbjct: 5 FFGDIAKIKYEGPDSTNPLAFRHYNPDEIVGGKRMEDHLRFAVAYWHTFTWPGGDPFGGQ 64 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T PW + T + AK + FEF LG +CFHD D+ P+GK AE NL+EIV Sbjct: 65 TFQRPWFEDT--MQAAKLKADVAFEFFSLLGSPFYCFHDADVRPEGKNFAENTKNLNEIV 122 Query: 521 ELAKQLQSETNIKPLWGTA 577 + Q Q++T +K LWGTA Sbjct: 123 DYFAQKQADTGVKLLWGTA 141
>XYLA_RHIME (Q92LW9) Xylose isomerase (EC 5.3.1.5)| Length = 436 Score = 147 bits (370), Expect = 3e-35 Identities = 70/139 (50%), Positives = 92/139 (66%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 FF IAKI YEGP S PL+++ YN ++V+LGK+M+D LRF+VA+WHTF GGDPFG Sbjct: 5 FFGDIAKIKYEGPESTNPLAFRHYNPDDVVLGKRMEDHLRFAVAYWHTFVWPGGDPFGGQ 64 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T PW +S+ AK + FEF + LGV +CFHD D+ P+G+ AE +NL+ IV Sbjct: 65 TFERPW--FKDSMEAAKLKADVAFEFFQLLGVPYYCFHDADVRPEGRNFAENTSNLNAIV 122 Query: 521 ELAKQLQSETNIKPLWGTA 577 + Q ET +K LWGTA Sbjct: 123 DYFAGKQGETGVKLLWGTA 141
>XYLA_LACBR (P29443) Xylose isomerase (EC 5.3.1.5)| Length = 449 Score = 146 bits (369), Expect = 4e-35 Identities = 70/141 (49%), Positives = 97/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKP-LSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 334 E++ G+ KI Y G KK L +++YN EE I+GKKMKDWLRF+VA+WHTF DPFG Sbjct: 4 EYWKGVDKIQYVGHQDKKSGLGFQYYNPEEEIMGKKMKDWLRFAVAYWHTFDQRLVDPFG 63 Query: 335 APTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDE 514 T P++ T+ + +A ++ A FEF +KLGV+ CFHDRD+AP+G TL ETNANLD+ Sbjct: 64 DGTAQRPYDKYTDPMDLALAKVDAAFEFYQKLGVDYLCFHDRDLAPEGDTLRETNANLDK 123 Query: 515 IVELAKQLQSETNIKPLWGTA 577 +V+ + Q + +K LW T+ Sbjct: 124 VVDKIVEYQKTSGMKVLWNTS 144
>XYLA1_XANAC (Q8PLL9) Xylose isomerase 1 (EC 5.3.1.5)| Length = 441 Score = 146 bits (369), Expect = 4e-35 Identities = 68/140 (48%), Positives = 94/140 (67%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 E+FPGI KI +EG S PL++K Y+A + I K M + LRF+VA+WH+F G G DPFG Sbjct: 7 EYFPGIGKIGFEGRDSDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGP 66 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T+ +PW+ G +L A+ + A FEF KLGV +CFHD D++PD + E +NL + Sbjct: 67 GTRAYPWDVGDTALNRAEAKADAAFEFFTKLGVPYYCFHDIDLSPDADDITEYESNLKHM 126 Query: 518 VELAKQLQSETNIKPLWGTA 577 V +A+Q Q++T IK LWGTA Sbjct: 127 VGVARQRQADTGIKLLWGTA 146
>XYLA_BRUSU (Q8G204) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 146 bits (368), Expect = 5e-35 Identities = 67/139 (48%), Positives = 94/139 (67%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 FF I K+ YEGP S PL+++ YNA+E++LGK+M+D LRF+VA+WH+F GGDPFG Sbjct: 5 FFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDPFGGR 64 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T + PW +N + AK + FEF LG +CFHD D+ P+G+ AE L+EIV Sbjct: 65 TFDRPW--FSNEIDAAKLKADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTRYLNEIV 122 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ ++ Q+ET +K LWGTA Sbjct: 123 DIFEKKQAETGMKLLWGTA 141
>XYLA_BRUME (Q8YFX5) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 146 bits (368), Expect = 5e-35 Identities = 67/139 (48%), Positives = 94/139 (67%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 FF I K+ YEGP S PL+++ YNA+E++LGK+M+D LRF+VA+WH+F GGDPFG Sbjct: 5 FFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDPFGGR 64 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T + PW +N + AK + FEF LG +CFHD D+ P+G+ AE L+EIV Sbjct: 65 TFDRPW--FSNEIDAAKLKADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTRYLNEIV 122 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ ++ Q+ET +K LWGTA Sbjct: 123 DIFEKKQAETGMKLLWGTA 141
>XYLA_BACC1 (Q739D2) Xylose isomerase (EC 5.3.1.5)| Length = 445 Score = 146 bits (368), Expect = 5e-35 Identities = 70/139 (50%), Positives = 92/139 (66%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + K+ YEG SK PL++K+YN EE++ K MK+ LRFS+A+WHTF G DPFGA Sbjct: 11 YFESVNKVLYEGKGSKNPLAFKYYNPEEIVGDKTMKEQLRFSIAYWHTFTADGTDPFGAA 70 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T W D + + +AK R++A F+ EKL V + FHDRDIAP+G TL ETN NLD IV Sbjct: 71 TMQRAW-DKYDGMDLAKARVEAAFQLFEKLNVPFFAFHDRDIAPEGSTLRETNKNLDVIV 129 Query: 521 ELAKQLQSETNIKPLWGTA 577 + K +N+K LW TA Sbjct: 130 TMIKDYMKTSNVKLLWNTA 148
>XYLA_FERGO (Q6T6K9) Xylose isomerase (EC 5.3.1.5)| Length = 433 Score = 145 bits (366), Expect = 8e-35 Identities = 70/135 (51%), Positives = 92/135 (68%) Frame = +2 Query: 173 IAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPTKNW 352 + K+ YEGP+SK L+YK+YN EE I GKKM+DW RF+VA+WHTF G DPFG+ T Sbjct: 5 VEKVVYEGPSSKNLLAYKFYNPEEEIAGKKMRDWFRFAVAYWHTFNSRGEDPFGSATFER 64 Query: 353 PWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVELAK 532 PW + + A ++ A FEF EK GVE + FHDRD+A +G TL E+N LD++VE K Sbjct: 65 PWFK-KDPMDTAFAKVDALFEFCEKTGVEYFTFHDRDLAHEGLTLRESNKILDKVVEKIK 123 Query: 533 QLQSETNIKPLWGTA 577 + +N+K LWGTA Sbjct: 124 EYMKSSNVKLLWGTA 138
>XYLA_BACME (O08325) Xylose isomerase (EC 5.3.1.5)| Length = 445 Score = 145 bits (365), Expect = 1e-34 Identities = 72/138 (52%), Positives = 90/138 (65%) Frame = +2 Query: 164 FPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPT 343 F K+ YEG SK PL++K+YN EEV+ GK MKD LRFSVA+WH F G DPFGA T Sbjct: 12 FESANKVLYEGKDSKNPLAFKYYNPEEVVGGKTMKDQLRFSVAYWHQFTADGTDPFGAAT 71 Query: 344 KNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVE 523 W D + + +AK R++A F+ E L V + FHDRDIAP+G TL ETN NLD IV Sbjct: 72 MQRSW-DRYDGMDLAKARVEAAFQLFETLNVPFFAFHDRDIAPEGSTLQETNKNLDVIVT 130 Query: 524 LAKQLQSETNIKPLWGTA 577 + K+ +N+K LW TA Sbjct: 131 MIKEYMQTSNVKLLWNTA 148
>XYLA_BACSW (P54272) Xylose isomerase (EC 5.3.1.5)| Length = 441 Score = 144 bits (363), Expect = 2e-34 Identities = 70/139 (50%), Positives = 94/139 (67%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F I+ I YEGP SK PL++K+YN EE + K M++ LRFSVA+WHTF G G DPFGA Sbjct: 3 YFDNISTIAYEGPASKNPLAFKFYNPEEKVGDKTMEEHLRFSVAYWHTFTGDGSDPFGAG 62 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 PW + + + +AK R++A FEF EKL + +CFHD DIAP+G+TL ET NLD IV Sbjct: 63 NMIRPW-NKYSGMDLAKARVEAAFEFFEKLNIPFFCFHDVDIAPEGETLKETYKNLDIIV 121 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ ++ + K LW TA Sbjct: 122 DMIEEYMKTSKTKLLWNTA 140
>XYLA_BACST (P54273) Xylose isomerase (EC 5.3.1.5)| Length = 441 Score = 144 bits (363), Expect = 2e-34 Identities = 70/139 (50%), Positives = 94/139 (67%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F I+ I YEGP SK PL++K+YN EE + K M++ LRFSVA+WHTF G G DPFGA Sbjct: 3 YFDNISTIAYEGPASKNPLAFKFYNPEEKVGDKTMEEHLRFSVAYWHTFTGDGSDPFGAG 62 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 PW + + + +AK R++A FEF EKL + +CFHD DIAP+G+TL ET NLD IV Sbjct: 63 NMIRPW-NKYSGMDLAKARVEAAFEFFEKLNIPFFCFHDVDIAPEGETLKETYKNLDIIV 121 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ ++ + K LW TA Sbjct: 122 DMIEEYMKTSKTKLLWNTA 140
>XYLA_ENTFA (Q7C3R3) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 143 bits (360), Expect = 4e-34 Identities = 69/139 (49%), Positives = 92/139 (66%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +FP I KI YEG +K +++ YN+EE+I+GK MK+ LRF+VA+WHT G DPFG Sbjct: 3 YFPKIEKIKYEGTNTKNMYAFRHYNSEEIIMGKTMKEHLRFAVAYWHTMTQDGSDPFGKA 62 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 W G + + AK+R+ A FE +EKL VE +CFHD DIAP+G +L E +N+DEI Sbjct: 63 VNKRSWL-GESPMETAKKRVIAFFEILEKLDVEYFCFHDIDIAPEGNSLKEFFSNIDEIT 121 Query: 521 ELAKQLQSETNIKPLWGTA 577 +L K+ ET IK LW TA Sbjct: 122 DLIKEKMDETGIKLLWNTA 140
>XYLA_LACPE (P21938) Xylose isomerase (EC 5.3.1.5)| Length = 449 Score = 142 bits (357), Expect = 9e-34 Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 1/141 (0%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKP-LSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 334 E++ G+ +I Y G KK L +++YN +EVI GKKM+DWLRFSVA+WHTF DPFG Sbjct: 4 EYWQGVDQIKYIGHQDKKSGLGFQYYNPDEVIGGKKMRDWLRFSVAYWHTFDQRLVDPFG 63 Query: 335 APTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDE 514 T P++ T+ + +A ++ A FEF KLGV+ CFHDRD+AP+G TL ETN NLD+ Sbjct: 64 DGTAQRPYDHITDPMDLALAKVDAAFEFYHKLGVDYLCFHDRDLAPEGDTLRETNRNLDK 123 Query: 515 IVELAKQLQSETNIKPLWGTA 577 +++ Q +T +K LW T+ Sbjct: 124 VIDKIVDYQKQTGMKVLWNTS 144
>XYLA_RHILO (Q98CR8) Xylose isomerase (EC 5.3.1.5)| Length = 441 Score = 140 bits (353), Expect = 3e-33 Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 3/142 (2%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 FF I KI YEGP S PL+Y++YN +EV+ GK+++D LRF+VA+WH+F GGDPFG Sbjct: 5 FFGDIQKIKYEGPDSTNPLAYRFYNPDEVVAGKRLEDHLRFAVAYWHSFAWPGGDPFGGQ 64 Query: 341 TKNWPW---EDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLD 511 T + PW G +++ +AK + FE LG +CFHD D+ P+GK +E+ A LD Sbjct: 65 TFDRPWFPKAGGIDTMELAKLKADVAFEMFSLLGAPYFCFHDADVRPEGKDFSESAARLD 124 Query: 512 EIVELAKQLQSETNIKPLWGTA 577 EI + +T +K LWGTA Sbjct: 125 EIADYFAGKMKQTGVKLLWGTA 146
>XYLA_PHOPR (Q6LUY7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 138 bits (348), Expect = 1e-32 Identities = 66/140 (47%), Positives = 90/140 (64%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 EFF I KI +EG + PL+++ Y+AE +ILGK MK+ LRF+ +WH F G D FGA Sbjct: 3 EFFKNINKIQFEGTDAINPLAFRHYDAERMILGKSMKEHLRFAACYWHNFCWPGSDVFGA 62 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T + PW N++ MA + A F+F KLGV +CFHD DIAP+G +L E N ++ Sbjct: 63 ATFDRPWLQSGNAMEMAHMKADAAFDFFSKLGVPYYCFHDTDIAPEGTSLKEYVNNFAQM 122 Query: 518 VELAKQLQSETNIKPLWGTA 577 V++ +Q Q ET +K LWGTA Sbjct: 123 VDVLEQKQDETGLKLLWGTA 142
>XYLA_BACSU (P04788) Xylose isomerase (EC 5.3.1.5)| Length = 445 Score = 138 bits (347), Expect = 1e-32 Identities = 68/139 (48%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F K+ YEG S PL++K+YN +EVI GK +K+ LRFS+A+WHTF G D FGA Sbjct: 11 YFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAA 70 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T PW D + +AK R++A FE EKL + FHDRDIAP+G TL ETN NLD I+ Sbjct: 71 TMQRPW-DHYKGMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDMIM 129 Query: 521 ELAKQLQSETNIKPLWGTA 577 + K + +K LW TA Sbjct: 130 GMIKDYMRNSGVKLLWNTA 148
>XYLA_TETHA (O82845) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 137 bits (346), Expect = 2e-32 Identities = 66/140 (47%), Positives = 87/140 (62%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 ++F + K+ YEG +K +++ YN EE+I+GK MKD LRFSVAFWHT G DPFG Sbjct: 2 DYFENVPKVQYEGKNAKSKYAFRHYNPEEIIMGKPMKDHLRFSVAFWHTMTEDGSDPFGD 61 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T WE G+ + AK R+ A FE +EKLG E +CFHD DIAP G +L E N+D + Sbjct: 62 GTYQRNWE-GSTPMETAKNRVDAFFEILEKLGAEYFCFHDVDIAPQGDSLKEFLENIDVM 120 Query: 518 VELAKQLQSETNIKPLWGTA 577 + K +T +K LW TA Sbjct: 121 TDYIKGKMDKTGVKLLWNTA 140
>XYLA_LACLA (Q9CFG7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 137 bits (345), Expect = 2e-32 Identities = 69/140 (49%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F IA I YEG +K +++ YN EEV+ GK M++ L F++AFWHT G DPFG Sbjct: 3 YFNDIAPIKYEGTKTKNMFAFRHYNPEEVVAGKTMEEQLHFALAFWHTITMDGSDPFGGA 62 Query: 341 TKNWPWE-DGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T PW+ +G + L A RR+ A FE EKLGV+ +CFHD DIAP G +L E ANLDEI Sbjct: 63 TMERPWDLEGGSELDRAHRRVDAFFEIAEKLGVKYYCFHDIDIAPTGNSLKEFYANLDEI 122 Query: 518 VELAKQLQSETNIKPLWGTA 577 + + Q T IK LW TA Sbjct: 123 TDHLLEKQKATGIKLLWNTA 142
>XYLA_KLEPN (P29442) Xylose isomerase (EC 5.3.1.5) (XI)| Length = 440 Score = 136 bits (342), Expect = 5e-32 Identities = 59/139 (42%), Positives = 91/139 (65%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + ++ YEGP S PL+++ YN +E++LGK+M+D LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGPKSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFGVG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 + + PW+ ++L MAKR+ FEF KL V +CFHD D++P+G +L E + N +V Sbjct: 64 SFDRPWQQPGDALEMAKRKADVAFEFFHKLNVPYYCFHDVDVSPEGASLKEYSNNFARMV 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 E+ + Q ++ +K LWGTA Sbjct: 124 EVLAEKQQQSGVKLLWGTA 142
>XYLA_BIFLO (Q8G3Q1) Xylose isomerase (EC 5.3.1.5)| Length = 449 Score = 134 bits (336), Expect = 2e-31 Identities = 64/137 (46%), Positives = 90/137 (65%), Gaps = 2/137 (1%) Frame = +2 Query: 173 IAKINYEGPTS--KKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPTK 346 + KI Y G K+ ++ +Y+A++V+ GKKMKDWLRF VA+WHTF DPFG T Sbjct: 6 VDKIEYVGRAKGPKEDFAFHYYDADKVVAGKKMKDWLRFGVAWWHTFNQELVDPFGTGTA 65 Query: 347 NWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVEL 526 + P+ T+ + A ++ FE +KLGVE +CFHDRDIAP+G TL ETNANLD++V+ Sbjct: 66 HRPYYKYTDPMDQALAKVDYAFELFQKLGVEYFCFHDRDIAPEGDTLRETNANLDKVVDK 125 Query: 527 AKQLQSETNIKPLWGTA 577 ++ T +K LW T+ Sbjct: 126 IEENMKSTGVKLLWNTS 142
>XYLA_SALTY (Q8ZL90) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 134 bits (336), Expect = 2e-31 Identities = 58/139 (41%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + ++ YEGP S PL+++ YN +E++LGK+M+D LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFGVG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 N PW+ +L +AKR+ FEF KL V +CFHD D++P+G +L E N ++V Sbjct: 64 AFNRPWQQPGEALELAKRKADVAFEFFHKLNVPFYCFHDVDVSPEGASLKEYKNNFAQMV 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ Q ++ +K LWGTA Sbjct: 124 DVLAAKQEQSGVKLLWGTA 142
>XYLA_SALTI (Q7C637) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 132 bits (333), Expect = 6e-31 Identities = 58/139 (41%), Positives = 87/139 (62%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + ++ YEGP S PL+++ YN +E++LGK+M+D LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFGVG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 N PW+ +L +AKR+ FEF KL V +CFHD D++P G +L E N ++V Sbjct: 64 AFNRPWQQPGEALELAKRKADVAFEFFHKLNVPFYCFHDVDVSPKGASLKEYKNNFAQMV 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ Q ++ +K LWGTA Sbjct: 124 DVLAAKQEQSGVKLLWGTA 142
>XYLA_BACLD (P77832) Xylose isomerase (EC 5.3.1.5)| Length = 448 Score = 132 bits (333), Expect = 6e-31 Identities = 65/139 (46%), Positives = 86/139 (61%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 FF I I YEG S+ P ++K+YN +E + GK MK+ LRF+VA+WHTF G DPFG Sbjct: 2 FFRNIGMIEYEGADSENPYAFKYYNPDEFVGGKTMKEHLRFAVAYWHTFDADGKDPFGDG 61 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T W T+ L AK R +A FEF EKLGV +CFHD DI +G TL ET LD++ Sbjct: 62 TMFRAWNRLTHPLDKAKARAEAAFEFFEKLGVPYFCFHDVDIVDEGATLRETFTYLDQMS 121 Query: 521 ELAKQLQSETNIKPLWGTA 577 K++ ++++ LW TA Sbjct: 122 SFLKEMMETSHVQLLWNTA 140
>XYLA_STAXY (P27157) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 132 bits (331), Expect = 9e-31 Identities = 65/134 (48%), Positives = 84/134 (62%) Frame = +2 Query: 173 IAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPTKNW 352 I K+NYEGP S S+K+YN EE + M + LRFSVA+WHTF DPFG Sbjct: 6 INKVNYEGPKSNNAFSFKYYNPEEKLGNHSMSELLRFSVAYWHTFTADLSDPFGVGVAER 65 Query: 353 PWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVELAK 532 W D + + AK R++A FEFMEK ++ +CFHD DI+P+G +L E+N NLD IVEL K Sbjct: 66 DW-DSLDEMEKAKARVEAIFEFMEKTRIDYFCFHDVDISPEGASLKESNENLDIIVELIK 124 Query: 533 QLQSETNIKPLWGT 574 + +T K LW T Sbjct: 125 EKMDQTGKKLLWNT 138
>XYLA_RUMFL (Q9S306) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 131 bits (329), Expect = 2e-30 Identities = 64/141 (45%), Positives = 92/141 (65%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 EFF I KI Y+GP S PLS+K+YN EEVI GK M++ L+F++++WHT G G D FG Sbjct: 2 EFFSNIGKIQYQGPKSTDPLSFKYYNPEEVINGKTMREHLKFALSWWHTMGGDGTDMFGC 61 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T + W ++ A AK ++ A FE M+KL ++ +CFHDRD++P+ +L TN LD + Sbjct: 62 GTTDKTWGQ-SDPAARAKAKVDAAFEIMDKLSIDYYCFHDRDLSPEYGSLKATNDQLDIV 120 Query: 518 VELAKQLQSETNIKPLWGTAQ 580 + K+ Q + K LWGTA+ Sbjct: 121 TDYIKEKQGD-KFKCLWGTAK 140
>XYLA_ECOLI (P00944) Xylose isomerase (EC 5.3.1.5) (D-xylulose keto-isomerase)| Length = 440 Score = 130 bits (327), Expect = 3e-30 Identities = 58/139 (41%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + ++ YEG S PL+++ YN +E++LGK+M++ LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 N PW+ +LA+AKR+ FEF KL V +CFHD D++P+G +L E N ++V Sbjct: 64 AFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMV 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ Q E+ +K LWGTA Sbjct: 124 DVLAGKQEESGVKLLWGTA 142
>XYLA_ECOL6 (Q8FCE3) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 130 bits (327), Expect = 3e-30 Identities = 58/139 (41%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + ++ YEG S PL+++ YN +E++LGK+M++ LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 N PW+ +LA+AKR+ FEF KL V +CFHD D++P+G +L E N ++V Sbjct: 64 AFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMV 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ Q E+ +K LWGTA Sbjct: 124 DVLAGKQEESGVKLLWGTA 142
>XYLA_ECO57 (Q7A9X4) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 130 bits (327), Expect = 3e-30 Identities = 58/139 (41%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + ++ YEG S PL+++ YN +E++LGK+M++ LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 N PW+ +LA+AKR+ FEF KL V +CFHD D++P+G +L E N ++V Sbjct: 64 AFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMV 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ Q E+ +K LWGTA Sbjct: 124 DVLAGKQEESGVKLLWGTA 142
>XYLA_OCEIH (Q8ELU7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 130 bits (327), Expect = 3e-30 Identities = 64/138 (46%), Positives = 86/138 (62%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F I I YEG S P ++K+YN E I G+ M++ LRF VA+WHTF DPFG Sbjct: 3 YFNEIGTIQYEGAKSDNPFAFKFYNPTESINGQTMEEHLRFGVAYWHTFTEDLSDPFGNG 62 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T PW D N + +AK R++A FEF EKL + +CFHD DIAP+G +L E+N NLD +V Sbjct: 63 TAIRPW-DKFNGMDLAKARVEAAFEFFEKLQIPYFCFHDVDIAPEGSSLKESNENLDTVV 121 Query: 521 ELAKQLQSETNIKPLWGT 574 + K+ ++ K LW T Sbjct: 122 AMIKEYMKDSKTKLLWNT 139
>XYLA_PHOLL (Q7N4P7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 129 bits (325), Expect = 5e-30 Identities = 62/139 (44%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + +I+YEG S PL+++ YN EE+ILGKKMKD LRF+V +WH F G D FG+ Sbjct: 4 YFERVNRISYEGRQSNNPLAFRHYNPEEIILGKKMKDHLRFAVCYWHNFCWDGTDMFGSG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 W+ G ++L +AK + FEF KL + +CFHD D+AP+G +L E NL + Sbjct: 64 AFERFWQKGGDALELAKLKADVAFEFFYKLNIPFYCFHDIDVAPEGCSLKEYIYNLGVMS 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ Q+ET +K LWGTA Sbjct: 124 DILADKQAETGVKLLWGTA 142
>XYLA_HAEIN (P44398) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 129 bits (325), Expect = 5e-30 Identities = 62/139 (44%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F I KI++EG S P ++K Y+A +VILGK M + LR +V +WHTF G D FG Sbjct: 4 YFDKIEKISFEGEKSTNPFAFKHYDANQVILGKTMAEHLRLAVCYWHTFCWNGNDMFGLG 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 + W+ +N LA A+++ FEF+ KLGV +CFHD DIAP+G ++ E N IV Sbjct: 64 SLERSWQKNSNLLAGAEQKADIAFEFLNKLGVPYYCFHDVDIAPEGNSVREYVQNFHHIV 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ ++ Q ET +K LWGTA Sbjct: 124 DILERKQVETGVKLLWGTA 142
>XYLA_YERPE (Q8Z9Z1) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 127 bits (319), Expect = 2e-29 Identities = 58/139 (41%), Positives = 88/139 (63%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +F + ++ YEG S PL++ YN +E+ILGK+M D LRF+ +WHTF G D FGA Sbjct: 4 YFNELEQVRYEGSQSTNPLAFHHYNPDEMILGKRMADHLRFAACYWHTFCWGGADMFGAN 63 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 + PW+ ++LA+AKR+ + FEF KL V +CFHD D++P+G +L E N + Sbjct: 64 AFDRPWQQPGDALALAKRKAEVAFEFFHKLNVPYYCFHDVDVSPEGASLQEYLNNFAVMT 123 Query: 521 ELAKQLQSETNIKPLWGTA 577 ++ + Q+ + +K LWGTA Sbjct: 124 DVLAEKQAASGVKLLWGTA 142
>XYLA_PSESM (Q880Z4) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 125 bits (315), Expect = 7e-29 Identities = 55/139 (39%), Positives = 89/139 (64%) Frame = +2 Query: 161 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 340 +FP + K+ YEGP S PL+++ Y+A++ +LGK M++ LR + +WHTF G D FG Sbjct: 3 YFPTVDKVIYEGPDSDSPLAFRHYDADKRVLGKPMREHLRMAACYWHTFVWPGADMFGVG 62 Query: 341 TKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIV 520 T PW+ + + +A + +A FEF KLG++ + FHD D+AP+G ++ E N ++V Sbjct: 63 TFKRPWQRAGDPMELAIGKAEAAFEFFSKLGIDYYSFHDTDVAPEGSSIKEYRNNFAQMV 122 Query: 521 ELAKQLQSETNIKPLWGTA 577 + ++ Q ++ IK LWGTA Sbjct: 123 DRLERHQEQSGIKLLWGTA 141
>XYLA_BRAJA (Q89VC7) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 111 bits (277), Expect = 2e-24 Identities = 50/140 (35%), Positives = 83/140 (59%) Frame = +2 Query: 158 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 337 +FF + + G + +++WY+ + ++ G++++D LRF+V +WH+ GGDPFG Sbjct: 6 KFFEESTPVAFAGQDAGPAPAFRWYDKDRLVHGRRLEDHLRFAVCYWHSLCWPGGDPFGG 65 Query: 338 PTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEI 517 T PW GT+++A A+ + FE L V + FHD D AP+G +LAE+ ANL+ I Sbjct: 66 ETFLRPWHHGTDAMAQARAKADVAFELFRLLDVPFFTFHDVDAAPEGASLAESVANLNAI 125 Query: 518 VELAKQLQSETNIKPLWGTA 577 +L + + ++ LWGTA Sbjct: 126 ADLFEAKMASAKVRLLWGTA 145
>TRMD_XYLFT (Q87F54) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 261 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -3 Query: 382 GQGIGAILPRPVLRRCTKGISSSTPERMPKCHAEPQPILHFLSQDHFLRVIPLVRKRLLA 203 G G G ++ LR C + + ++ P+ P + PQ +L L+Q ++ L R LL Sbjct: 55 GGGPGMVMLIEPLRACLEAVRAADPQPAPLIYLSPQGVL--LNQSRARKLAMLPRMILLC 112 Query: 202 GR 197 GR Sbjct: 113 GR 114
>TRMD_XYLFA (Q9PH37) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 261 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -3 Query: 382 GQGIGAILPRPVLRRCTKGISSSTPERMPKCHAEPQPILHFLSQDHFLRVIPLVRKRLLA 203 G G G ++ LR C + + ++ P+ P + PQ +L L+Q ++ L R LL Sbjct: 55 GGGPGMVMLIEPLRACLEAVRAADPQPAPLIYLSPQGVL--LNQSRARKLAMLPRMILLC 112 Query: 202 GR 197 GR Sbjct: 113 GR 114
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -1 Query: 159 SPSQSSEAASPHLAPMSAGQVSCAATAADRQRDEAS 52 SP + AASP +P+ AG+++ AATA + + +S Sbjct: 1535 SPGATPPAASPKTSPLPAGKLTAAATAPQTKGNSSS 1570
>REPS2_HUMAN (Q8NFH8) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 660 Score = 30.4 bits (67), Expect = 3.9 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Frame = -1 Query: 333 PKGSPPVPRNVCQNAT-LNRNQSFIFFPRITSSALYHL*ESGFLLVGPS*LILAMPGKNS 157 P PP P+ A+ L+ N+ +F P + ++ +SG L P A+P + Sbjct: 477 PPTPPPRPQKTHSRASSLDLNK--VFQPSVPAT------KSGLLPPPP-----ALPPRPC 523 Query: 156 PSQSSEAASPHLAPMSAGQVSCAATAADRQRDEASSRTRSXP 31 PSQS + + L P + S AA ++ ++D S+ S P Sbjct: 524 PSQSEQVSEAELLPQLSRAPSQAAESSPAKKDVLYSQPPSKP 565
>PDI_YEAST (P17967) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Thioredoxin-related glycoprotein 1) Length = 522 Score = 30.4 bits (67), Expect = 3.9 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +2 Query: 443 WCFHDRDIAPDGKTLAETNANLDEIVELAKQLQSETNIK 559 WC H + +AP + LA+T AN V +AK +E +++ Sbjct: 405 WCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR 443
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac| Length = 1120 Score = 30.4 bits (67), Expect = 3.9 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -1 Query: 153 SQSSEAASPHLAPMSAGQVSCAATAADRQRDEASSRTRSXPAXHG 19 S+++ A+S A SAGQ S +ATAA + + A+S + G Sbjct: 298 SKTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAG 342
>GCS1_HUMAN (Q13724) Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106)| (Processing A-glucosidase I) Length = 837 Score = 30.4 bits (67), Expect = 3.9 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +1 Query: 307 PGYWRRSLWCTYEELALGGWHQFLGHG*EKNES-SLRVHGE 426 P YWR ++W LALG H + GH +++ + ++HGE Sbjct: 747 PPYWRGAVWLNVNYLALGALHHY-GHLEGPHQARAAKLHGE 786
>NALP6_HUMAN (P59044) NACHT-, LRR- and PYD-containing protein 6| (PYRIN-containing APAF1-like protein 5) Length = 892 Score = 30.0 bits (66), Expect = 5.0 Identities = 16/54 (29%), Positives = 31/54 (57%) Frame = +2 Query: 377 LAMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVELAKQL 538 LA+A+ + A E + + ++R+ RD+ PDG+++ + V+LA+QL Sbjct: 15 LAVARELLLAALEELSQEQLKRFRHKLRDVGPDGRSIPWGRLERADAVDLAEQL 68
>XYLA_ARTS7 (P12070) Xylose isomerase (EC 5.3.1.5)| Length = 394 Score = 30.0 bits (66), Expect = 5.0 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Frame = +2 Query: 281 FSVAFWHTFRGTGGDPFGAPT-KNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHD 457 F+ W T TG DPFG T KN + + LA +LG FHD Sbjct: 10 FTFGLW-TVGWTGADPFGVATRKNLDPVEAVHKLA--------------ELGAYGITFHD 54 Query: 458 RDIAPDGKTLAETNANLDEIVELAK 532 D+ P T AE L + + K Sbjct: 55 NDLIPFDATEAEREKILGDFNQALK 79
>DNAJ_LACSK (O87778) Chaperone protein dnaJ| Length = 383 Score = 29.6 bits (65), Expect = 6.6 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = +2 Query: 116 GAKCGDAASDDWEGEFFPGIAKINYEGPTSKKPLSYKW-YNAEEVILGKKMKDWLRFS-V 289 G G DD FF G A+ GP L Y+ EE + GK+ K + +S Sbjct: 93 GGAEGFGGFDDIFSSFFGGGARQQPNGPRQGSDLQYRMDLKFEEAVFGKETK--ISYSRE 150 Query: 290 AFWHTFRGTGGDP 328 A HT G+G P Sbjct: 151 AECHTCHGSGAKP 163
>XYLA_THECA (P56681) Xylose isomerase (EC 5.3.1.5)| Length = 387 Score = 29.6 bits (65), Expect = 6.6 Identities = 26/94 (27%), Positives = 39/94 (41%) Frame = +2 Query: 278 RFSVAFWHTFRGTGGDPFGAPTKNWPWEDGTNSLAMAKRRMKAHFEFMEKLGVERWCFHD 457 RF+ W T G DPFG + + + + + + + +LGV HD Sbjct: 9 RFTFGLW-TVGNVGRDPFGDAVR-----ERLDPVYVGHK--------LAELGVHGVNLHD 54 Query: 458 RDIAPDGKTLAETNANLDEIVELAKQLQSETNIK 559 D+ P G AE D+IV K+ ET +K Sbjct: 55 EDLIPRGTPPAER----DQIVRRFKRALDETGLK 84
>PDI_WHEAT (P52589) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 515 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 443 WCFHDRDIAPDGKTLAETNANLDEIVELAKQLQSETNIKPLWG 571 WC H + +AP+ + A+ + D + LAK ++ KPL G Sbjct: 67 WCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAG 109
>PDI_HORVU (P80284) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Endosperm protein E-1) Length = 513 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 443 WCFHDRDIAPDGKTLAETNANLDEIVELAKQLQSETNIKPLWG 571 WC H + +AP+ + A+ + D + LAK ++ KPL G Sbjct: 66 WCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAG 108
>GCS1_MOUSE (Q80UM7) Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106)| (Glycoprotein-processing glucosidase I) (Glucosidase 1) Length = 834 Score = 29.3 bits (64), Expect = 8.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 307 PGYWRRSLWCTYEELALGGWHQFLGH 384 P YWR ++W LALG H + GH Sbjct: 744 PPYWRGAVWLNINYLALGALHHY-GH 768
>CN159_MOUSE (Q8BH86) Protein C14orf159 homolog, mitochondrial precursor| Length = 617 Score = 29.3 bits (64), Expect = 8.6 Identities = 28/100 (28%), Positives = 41/100 (41%) Frame = -3 Query: 466 DVPVMEAPPFNSKLLHELEVSFHSSLSHGQGIGAILPRPVLRRCTKGISSSTPERMPKCH 287 DVPV P S E +S + L+ G ++ P + S TPE +P+ H Sbjct: 222 DVPVFWPSPLTSL---EAVISCKAPLAFASPPGCMVMVP--KDTASSASCLTPEMVPEVH 276 Query: 286 AEPQPILHFLSQDHFLRVIPLVRKRLLAGRTLIVDLGNAG 167 A + LH+ + P +K T+ VD GN G Sbjct: 277 AISKDPLHY-----SIVSAPAAQKVRELESTIAVDPGNRG 311
>DEOB_LACLA (Q9CH12) Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)| Length = 411 Score = 29.3 bits (64), Expect = 8.6 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 362 DGTNSL--AMAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVELAKQ 535 DG + L AM K F F + + H RD+ GK + + + L EI+++ K+ Sbjct: 279 DGVDRLLKAMTKAEFTEGFSFTNLVDFDAKYGHRRDVEGYGKAIEDFDGRLPEIIDVMKE 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,080,991 Number of Sequences: 219361 Number of extensions: 1861622 Number of successful extensions: 6331 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 6082 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6304 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
