| Clone Name | bags8d21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full insert sequence Length = 3731 Score = 408 bits (206), Expect = e-111 Identities = 444/524 (84%) Strand = Plus / Plus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | ||| ||||||||| ||||||||||||| Sbjct: 2382 gtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgac 2441 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 2442 gtaacaagctcaaggactccaatcccctcaaaaaaaatgactggcttcaatgccttctgg 2501 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 2502 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 2561 Query: 181 tacctaaccaaggagtggtacaagaaaacgacatggatgtacatcgcttatcctgtcttc 240 || |||| || | | ||||||||||| ||||||||||||||| ||||| |||||| || Sbjct: 2562 tatctaagcaggaaatggtacaagaagacgacatggatgtacctcgctgttcctgttgtc 2621 Query: 241 ttatatttgtgcgagcgcattgttcggttgtttagaagcaatgatgcagttaagattcag 300 | ||| | | ||||| ||| ||||||||||||| ||| ||||||||||| ||||||| Sbjct: 2622 ctgtatgtaagtgagcgtattcttcggttgtttaggagccatgatgcagttgggattcag 2681 Query: 301 aaggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttc 360 |||||||| || ||||| |||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 2682 aaggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttc 2741 Query: 361 agataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 |||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 2742 agataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 2801 Query: 421 catccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgcaca 480 |||||||||||| | ||||||||||| |||||| |||| | ||||| || ||||||||| Sbjct: 2802 catccattttccataacatcagcacctggagatgattatcttagtgttcatattcgcaca 2861 Query: 481 aggggtgattggacttctcggcttangactgtcttctctgaggc 524 ||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 2862 aggggtgattggacttcacggcttagaactgttttctctgaggc 2905
>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase protein B (rbohB) mRNA, complete cds Length = 3334 Score = 400 bits (202), Expect = e-108 Identities = 444/524 (84%), Gaps = 1/524 (0%) Strand = Plus / Plus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | ||| ||||||||| ||||||||||||| Sbjct: 1791 gtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgac 1850 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 1851 gtaacaagctcaaggactccaatcccctcaaaaaa-atgactggcttcaatgccttctgg 1909 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 1910 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 1969 Query: 181 tacctaaccaaggagtggtacaagaaaacgacatggatgtacatcgcttatcctgtcttc 240 || |||| || | | ||||||||||| ||||||||||||||| ||||| |||||| || Sbjct: 1970 tatctaagcaggaaatggtacaagaagacgacatggatgtacctcgctgttcctgttgtc 2029 Query: 241 ttatatttgtgcgagcgcattgttcggttgtttagaagcaatgatgcagttaagattcag 300 | ||| | | ||||| ||| ||||||||||||| ||| ||||||||||| ||||||| Sbjct: 2030 ctgtatgtaagtgagcgtattcttcggttgtttaggagccatgatgcagttgggattcag 2089 Query: 301 aaggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttc 360 |||||||| || ||||| |||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 2090 aaggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttc 2149 Query: 361 agataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 |||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 2150 agataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 2209 Query: 421 catccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgcaca 480 |||||||||||| | ||||||||||| |||||| |||| | ||||| || ||||||||| Sbjct: 2210 catccattttccataacatcagcacctggagatgattatcttagtgttcatattcgcaca 2269 Query: 481 aggggtgattggacttctcggcttangactgtcttctctgaggc 524 ||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 2270 aggggtgattggacttcacggcttagaactgttttctctgaggc 2313
>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full insert sequence Length = 2978 Score = 400 bits (202), Expect = e-108 Identities = 444/524 (84%), Gaps = 1/524 (0%) Strand = Plus / Plus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | ||| ||||||||| ||||||||||||| Sbjct: 1504 gtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgac 1563 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 1564 gtaacaagctcaaggactccaatcccctcaaaaaa-atgactggcttcaatgccttctgg 1622 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 1623 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 1682 Query: 181 tacctaaccaaggagtggtacaagaaaacgacatggatgtacatcgcttatcctgtcttc 240 || |||| || | | ||||||||||| ||||||||||||||| ||||| |||||| || Sbjct: 1683 tatctaagcaggaaatggtacaagaagacgacatggatgtacctcgctgttcctgttgtc 1742 Query: 241 ttatatttgtgcgagcgcattgttcggttgtttagaagcaatgatgcagttaagattcag 300 | ||| | | ||||| ||| ||||||||||||| ||| ||||||||||| ||||||| Sbjct: 1743 ctgtatgtaagtgagcgtattcttcggttgtttaggagccatgatgcagttgggattcag 1802 Query: 301 aaggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttc 360 |||||||| || ||||| |||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 1803 aaggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttc 1862 Query: 361 agataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 |||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 1863 agataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 1922 Query: 421 catccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgcaca 480 |||||||||||| | ||||||||||| |||||| |||| | ||||| || ||||||||| Sbjct: 1923 catccattttccataacatcagcacctggagatgattatcttagtgttcatattcgcaca 1982 Query: 481 aggggtgattggacttctcggcttangactgtcttctctgaggc 524 ||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 1983 aggggtgattggacttcacggcttagaactgttttctctgaggc 2026
>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full insert sequence Length = 3198 Score = 392 bits (198), Expect = e-106 Identities = 443/524 (84%), Gaps = 1/524 (0%) Strand = Plus / Plus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | ||| ||||||||| ||||||||||||| Sbjct: 1867 gtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgac 1926 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 1927 gtaacaagctcaaggactccaatcccctcaaaaaa-atgactggcttcaatgccttctgg 1985 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 1986 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 2045 Query: 181 tacctaaccaaggagtggtacaagaaaacgacatggatgtacatcgcttatcctgtcttc 240 || |||| || | | ||||||||||| ||||||||||||||| ||||| |||||| || Sbjct: 2046 tatctaagcaggaaatggtacaagaagacgacatggatgtacctcgctgttcctgttgtc 2105 Query: 241 ttatatttgtgcgagcgcattgttcggttgtttagaagcaatgatgcagttaagattcag 300 | ||| | | ||||| ||| ||||||||||||| ||| ||||||||||| ||||||| Sbjct: 2106 ctgtatgtaagtgagcgtattcttcggttgtttaggagccatgatgcagttgggattcag 2165 Query: 301 aaggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttc 360 |||||||| || ||||| |||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 2166 aaggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttc 2225 Query: 361 agataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 |||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 2226 agataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 2285 Query: 421 catccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgcaca 480 |||||||||||| | | ||||||||| |||||| |||| | ||||| || ||||||||| Sbjct: 2286 catccattttccataaaatcagcacctggagatgattatcttagtgttcatattcgcaca 2345 Query: 481 aggggtgattggacttctcggcttangactgtcttctctgaggc 524 ||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 2346 aggggtgattggacttcacggcttagaactgttttctctgaggc 2389
>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full insert sequence Length = 3255 Score = 385 bits (194), Expect = e-103 Identities = 443/524 (84%), Gaps = 2/524 (0%) Strand = Plus / Plus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | || ||||||||| ||||||||||||| Sbjct: 1865 gtgtggtcatggtggtgctcatggcaatagcattac-attagcccaaccatggttccgac 1923 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 1924 gtaacaagctcaaggactccaatcccctcaaaaaa-atgactggcttcaatgccttctgg 1982 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 1983 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 2042 Query: 181 tacctaaccaaggagtggtacaagaaaacgacatggatgtacatcgcttatcctgtcttc 240 || |||| || | | ||||||||||| ||||||||||||||| ||||| |||||| || Sbjct: 2043 tatctaagcaggaaatggtacaagaagacgacatggatgtacctcgctgttcctgttgtc 2102 Query: 241 ttatatttgtgcgagcgcattgttcggttgtttagaagcaatgatgcagttaagattcag 300 | ||| | | ||||| ||| ||||||||||||| ||| ||||||||||| ||||||| Sbjct: 2103 ctgtatgtaagtgagcgtattcttcggttgtttaggagccatgatgcagttgggattcag 2162 Query: 301 aaggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttc 360 |||||||| || ||||| |||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 2163 aaggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttc 2222 Query: 361 agataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 |||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 2223 agataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 2282 Query: 421 catccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgcaca 480 |||||||||||| | ||||||||||| |||||| |||| | ||||| || ||||||||| Sbjct: 2283 catccattttccataacatcagcacctggagatgattatcttagtgttcatattcgcaca 2342 Query: 481 aggggtgattggacttctcggcttangactgtcttctctgaggc 524 ||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 2343 aggggtgattggacttcacggcttagaactgttttctctgaggc 2386
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 133 bits (67), Expect = 7e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 302 aggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttca 361 ||||||| || ||||| |||||||| ||||||||||||||| | |||||||||||||||| Sbjct: 14605909 aggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttca 14605850 Query: 362 gataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 ||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 14605849 gataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 14605791 Score = 117 bits (59), Expect = 4e-23 Identities = 170/206 (82%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | ||| ||||||||| ||||||||||||| Sbjct: 14606497 gtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgac 14606438 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 14606437 gtaacaagctcaaggactccaatcccctcaa-aaaaatgactggcttcaatgccttctgg 14606379 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 14606378 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 14606319 Query: 181 tacctaaccaaggagtggtacaagaa 206 || |||| || | | ||||||||||| Sbjct: 14606318 tatctaagcaggaaatggtacaagaa 14606293 Score = 107 bits (54), Expect = 4e-20 Identities = 92/105 (87%) Strand = Plus / Minus Query: 419 ggcatccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgca 478 |||||||||||||| | ||||||||||| |||||| |||| | ||||| || ||||||| Sbjct: 14605700 ggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgca 14605641 Query: 479 caaggggtgattggacttctcggcttangactgtcttctctgagg 523 ||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct: 14605640 caaggggtgattggacttcacggcttagaactgttttctctgagg 14605596 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 253 gagcgcattgttcggttgtttagaagcaatgatgcagttaagattcagaaggt 305 ||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 14606138 gagcgtattcttcggttgtttaggagccatgatgcagttgggattcagaaggt 14606086 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacg 210 |||| ||||||||||||||||||| Sbjct: 35808843 accagggagtggtacaagaaaacg 35808866
>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1164G11 Length = 142699 Score = 133 bits (67), Expect = 7e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 302 aggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttca 361 ||||||| || ||||| |||||||| ||||||||||||||| | |||||||||||||||| Sbjct: 87286 aggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttca 87227 Query: 362 gataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 ||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 87226 gataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 87168 Score = 117 bits (59), Expect = 4e-23 Identities = 170/206 (82%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | ||| ||||||||| ||||||||||||| Sbjct: 87874 gtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgac 87815 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 87814 gtaacaagctcaaggactccaatcccctcaa-aaaaatgactggcttcaatgccttctgg 87756 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 87755 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 87696 Query: 181 tacctaaccaaggagtggtacaagaa 206 || |||| || | | ||||||||||| Sbjct: 87695 tatctaagcaggaaatggtacaagaa 87670 Score = 107 bits (54), Expect = 4e-20 Identities = 92/105 (87%) Strand = Plus / Minus Query: 419 ggcatccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgca 478 |||||||||||||| | ||||||||||| |||||| |||| | ||||| || ||||||| Sbjct: 87077 ggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgca 87018 Query: 479 caaggggtgattggacttctcggcttangactgtcttctctgagg 523 ||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct: 87017 caaggggtgattggacttcacggcttagaactgttttctctgagg 86973 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 253 gagcgcattgttcggttgtttagaagcaatgatgcagttaagattcagaaggt 305 ||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 87515 gagcgtattcttcggttgtttaggagccatgatgcagttgggattcagaaggt 87463
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 133 bits (67), Expect = 7e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 302 aggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggtttca 361 ||||||| || ||||| |||||||| ||||||||||||||| | |||||||||||||||| Sbjct: 165222 aggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttca 165163 Query: 362 gataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatgg 420 ||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 165162 gataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatgg 165104 Score = 117 bits (59), Expect = 4e-23 Identities = 170/206 (82%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 1 gtgttgtcatggtagtgctcatgtcaatatcctttgtattagcccagccatggttccgac 60 |||| |||||||| ||||||||| ||||| | ||| ||||||||| ||||||||||||| Sbjct: 165810 gtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgac 165751 Query: 61 gtaacaagctcaagcccactaatccactcaagnaagatgactggtttcaacgccttctgg 120 |||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 165750 gtaacaagctcaaggactccaatcccctcaa-aaaaatgactggcttcaatgccttctgg 165692 Query: 121 tttacgcaccacctatttgctattgtgtatgcgctgctcatcgtccatggaacaagtttg 180 ||||| |||||||| |||| |||||||| | ||||| | ||||||||||| | ||| Sbjct: 165691 tttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttg 165632 Query: 181 tacctaaccaaggagtggtacaagaa 206 || |||| || | | ||||||||||| Sbjct: 165631 tatctaagcaggaaatggtacaagaa 165606 Score = 107 bits (54), Expect = 4e-20 Identities = 92/105 (87%) Strand = Plus / Minus Query: 419 ggcatccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgca 478 |||||||||||||| | ||||||||||| |||||| |||| | ||||| || ||||||| Sbjct: 165013 ggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgca 164954 Query: 479 caaggggtgattggacttctcggcttangactgtcttctctgagg 523 ||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct: 164953 caaggggtgattggacttcacggcttagaactgttttctctgagg 164909 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 253 gagcgcattgttcggttgtttagaagcaatgatgcagttaagattcagaaggt 305 ||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 165451 gagcgtattcttcggttgtttaggagccatgatgcagttgggattcagaaggt 165399
>ref|NM_190481.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2532 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 |||| ||||||||||||||||||||||||||||||| Sbjct: 1489 accagggagtggtacaagaaaacgacatggatgtac 1524
>dbj|AK100241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054P13, full insert sequence Length = 2899 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 |||| ||||||||||||||||||||||||||||||| Sbjct: 1638 accagggagtggtacaagaaaacgacatggatgtac 1673
>dbj|AK068400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M04, full insert sequence Length = 2525 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 |||| ||||||||||||||||||||||||||||||| Sbjct: 1264 accagggagtggtacaagaaaacgacatggatgtac 1299
>dbj|AK066013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I12, full insert sequence Length = 2195 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 |||| ||||||||||||||||||||||||||||||| Sbjct: 912 accagggagtggtacaagaaaacgacatggatgtac 947
>gb|AY107416.1| Zea mays PCO107390 mRNA sequence Length = 1867 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 |||| ||||||||||||||| ||||||||||||||| Sbjct: 558 accagggagtggtacaagaagacgacatggatgtac 593
>ref|NM_124485.2| Arabidopsis thaliana RHD2 (ROOT HAIR DEFECTIVE 2) AT5G51060 (RHD2) mRNA, complete cds Length = 3174 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 400 gctgtatctccatatgaatggcatccattttccgttacatcagcaccaggagataattac 459 ||||| ||||||| |||||||||||||||||| | ||||| |||||| |||| ||||| Sbjct: 2144 gctgtttctccatttgaatggcatccattttcaatcacatctgcaccacaagatgattac 2203 Query: 460 ttgagtgtccacatt 474 | ||||| |||||| Sbjct: 2204 ctaagtgttcacatt 2218
>dbj|AK117159.1| Arabidopsis thaliana At5g51060 mRNA for putative respiratory burst oxidase protein, complete cds, clone: RAFL16-70-B03 Length = 3175 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 400 gctgtatctccatatgaatggcatccattttccgttacatcagcaccaggagataattac 459 ||||| ||||||| |||||||||||||||||| | ||||| |||||| |||| ||||| Sbjct: 2144 gctgtttctccatttgaatggcatccattttcaatcacatctgcaccacaagatgattac 2203 Query: 460 ttgagtgtccacatt 474 | ||||| |||||| Sbjct: 2204 ctaagtgttcacatt 2218
>ref|NM_118641.2| Arabidopsis thaliana calcium ion binding / oxidoreductase AT4G25090 mRNA, complete cds Length = 2705 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 189 caaggagtggtacaagaaaacgacatggatgtac 222 |||||| ||||||||||||||||| ||||||||| Sbjct: 1533 caaggaatggtacaagaaaacgacgtggatgtac 1566
>ref|NM_120821.2| Arabidopsis thaliana ATRBOHA; calcium ion binding / oxidoreductase AT5G07390 (ATRBOHA) mRNA, complete cds Length = 3062 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 196 tggtacaagaaaacgacatggatgta 221 |||||||||||||||||||||||||| Sbjct: 1842 tggtacaagaaaacgacatggatgta 1867 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 415 gaatggcatccattttccgttacatcagcaccaggagataattacttgagtgtccacat 473 |||||||||||||| || |||| ||||| ||||||||| | ||| | ||||||||||| Sbjct: 2064 gaatggcatccattctcaattacctcagctccaggagatgactacctcagtgtccacat 2122
>dbj|AB198717.1| Solanum tuberosum StrbohD mRNA for NADPH oxidase, complete cds Length = 2580 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 185 taaccaaggagtggtacaagaaaacgacatggatgtac 222 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 1565 taaccaaagaatggtacaagaagacgacatggatgtac 1602
>gb|BT003857.1| Arabidopsis thaliana clone RAFL15-01-J08 (R20364) putative respiratory burst oxidase protein A (At5g07390) mRNA, complete cds Length = 3078 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 196 tggtacaagaaaacgacatggatgta 221 |||||||||||||||||||||||||| Sbjct: 1842 tggtacaagaaaacgacatggatgta 1867 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 415 gaatggcatccattttccgttacatcagcaccaggagataattacttgagtgtccacat 473 |||||||||||||| || |||| ||||| ||||||||| | ||| | ||||||||||| Sbjct: 2064 gaatggcatccattctcaattacctcagctccaggagatgactacctcagtgtccacat 2122
>dbj|AP004481.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT14O07, TM0013, complete sequence Length = 74668 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 419 ggcatccattttccgttacatcagcaccaggagataattacttgagtgtccacattcgca 478 |||||||||| ||| |||| ||||||||||||||| | ||| | ||||| ||||| |||| Sbjct: 42340 ggcatccattctccattacctcagcaccaggagatgagtacctaagtgtgcacatccgca 42399 Query: 479 ca 480 || Sbjct: 42400 ca 42401
>dbj|AB050661.1| Solanum tuberosum StrbohB mRNA for respiratory burst oxidase homolog, complete cds Length = 2856 Score = 52.0 bits (26), Expect = 0.002 Identities = 67/81 (82%) Strand = Plus / Plus Query: 439 tcagcaccaggagataattacttgagtgtccacattcgcacaaggggtgattggacttct 498 ||||| ||||||||| ||||| | ||| | |||||||| ||| |||||||||||| ||| Sbjct: 1969 tcagctccaggagatgattacctaagtatgcacattcgaacattgggtgattggacatct 2028 Query: 499 cggcttangactgtcttctct 519 | ||||| ||| |||||||| Sbjct: 2029 cagcttaaaactctcttctct 2049 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 tggtacaagaaaacgacatggatgtacatcgc 227 ||||||||||| || ||||||||||| ||||| Sbjct: 1723 tggtacaagaagacaacatggatgtatatcgc 1754
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 50.1 bits (25), Expect = 0.008 Identities = 97/121 (80%) Strand = Plus / Plus Query: 300 gaaggttgcggtatatcctgggaatgtgttggctctttatatgaccaagccacctggttt 359 |||||| || || |||||||| ||||||||||||||| ||||| | ||||| | || || Sbjct: 100432 gaaggtggctgtttatcctggaaatgtgttggctcttcatatgtcaaagcctcaggggtt 100491 Query: 360 cagataccgaagtgggcagtacatctttataaattgcggcgctgtatctccatatgaatg 419 |||||| ||||| || ||||| ||| ||||||| | ||||| ||||||| |||||| Sbjct: 100492 tagatacaagagtggacaatacatgtttgtaaattgtgctgctgtctctccatttgaatg 100551 Query: 420 g 420 | Sbjct: 100552 g 100552 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacg 210 |||||||| ||||||||||||||| Sbjct: 70348 accaaggaatggtacaagaaaacg 70371
>gb|BT009552.1| Triticum aestivum clone wr1.pk178.b5:fis, full insert mRNA sequence Length = 2312 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 196 tggtacaagaaaacgacatggatgtacat 224 |||||| |||||||||||||||||||||| Sbjct: 75 tggtacgagaaaacgacatggatgtacat 103
>dbj|AB198716.1| Solanum tuberosum StrbohC mRNA for NADPH oxidase, complete cds Length = 2817 Score = 50.1 bits (25), Expect = 0.008 Identities = 130/165 (78%) Strand = Plus / Plus Query: 289 gttaagattcagaaggttgcggtatatcctgggaatgtgttggctctttatatgaccaag 348 ||||||||| |||||| || |||||||| || ||||||||||| ||| | ||| | || Sbjct: 1825 gttaagattttgaaggtggctgtatatccaggaaatgtgttggcccttcacatgtcaaaa 1884 Query: 349 ccacctggtttcagataccgaagtgggcagtacatctttataaattgcggcgctgtatct 408 |||| || | || |||| ||||||||| ||||| ||| | || || | || || || Sbjct: 1885 ccacaaggctacaaatacaaaagtgggcaatacatgtttgtcaactgtgctgcggtttca 1944 Query: 409 ccatatgaatggcatccattttccgttacatcagcaccaggagat 453 |||| ||||||||||||||||||| |||| || || ||||||||| Sbjct: 1945 ccatttgaatggcatccattttccattacttcggccccaggagat 1989 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 ||||| || |||||||||| | |||||||||||||| Sbjct: 1720 accaaagattggtacaagagatcgacatggatgtac 1755
>gb|AF148534.1|AF148534 Lycopersicon esculentum whitefly-induced gp91-phox (Wfi1) mRNA, complete cds Length = 3537 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 409 ccatatgaatggcatccattttccgttacatcagcaccaggagat 453 |||| ||||||||||||||||||| |||| || || ||||||||| Sbjct: 2186 ccatttgaatggcatccattttccattacttcggccccaggagat 2230 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 196 tggtacaagaaaacgacatggatgtac 222 |||||||||| |||||||||||||||| Sbjct: 1970 tggtacaagagaacgacatggatgtac 1996
>gb|DQ497543.1| Nicotiana langsdorffii x Nicotiana sanderae NADPH oxidase (rbohD) mRNA, partial cds Length = 601 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 ||||| || |||||||||| |||||||||||||||| Sbjct: 88 accaaagattggtacaagagaacgacatggatgtac 123 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 406 tctccatatgaatggcatccattttccgttacatcagcaccaggagat 453 ||||||| ||| |||||||||||||| |||| || || ||||||||| Sbjct: 310 tctccatttgagtggcatccattttcaattacttcggccccaggagat 357
>gb|AF506374.1| Nicotiana tabacum NADPH oxidase (rbohD) mRNA, complete cds Length = 2817 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 ||||| || |||||||||| |||||||||||||||| Sbjct: 1720 accaaagattggtacaagagaacgacatggatgtac 1755 Score = 42.1 bits (21), Expect = 1.9 Identities = 129/165 (78%) Strand = Plus / Plus Query: 289 gttaagattcagaaggttgcggtatatcctgggaatgtgttggctctttatatgaccaag 348 ||||||||| |||||| || |||||||| || ||||||||||| ||| | ||| | || Sbjct: 1825 gttaagattttgaaggtggcagtatatccaggaaatgtgttggcacttcacatgtcaaaa 1884 Query: 349 ccacctggtttcagataccgaagtgggcagtacatctttataaattgcggcgctgtatct 408 |||| || | || |||| ||||||||| ||||| ||| | || || | || || ||| Sbjct: 1885 ccacagggctacaaatacaaaagtgggcaatacatgtttgtcaactgtgctgcagtttct 1944 Query: 409 ccatatgaatggcatccattttccgttacatcagcaccaggagat 453 |||| ||| |||||||||||||| |||| || || ||||||||| Sbjct: 1945 ccatttgagtggcatccattttcaattacttcggccccaggagat 1989
>dbj|AB079499.1| Nicotiana benthamiana NbrbohB mRNA for respiratory burst oxidase homolog, complete cds Length = 3290 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacgacatggatgtac 222 ||||| || |||||||||| |||||||||||||||| Sbjct: 1999 accaaagattggtacaagagaacgacatggatgtac 2034 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 406 tctccatatgaatggcatccattttccgttacatcagcaccaggagat 453 ||||||| ||| |||||||||||||| |||| || || ||||||||| Sbjct: 2221 tctccatttgagtggcatccattttcaattacttcggccccaggagat 2268
>dbj|AB079498.1| Nicotiana benthamiana NbrbohA mRNA for respiratory burst oxidase homolog, complete cds Length = 3732 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 418 tggcatccattttccgttacatcagcaccaggagataattacttgag 464 ||||||||||||||| |||| ||||| || || ||| |||||||||| Sbjct: 2191 tggcatccattttccattacttcagctcccggggatgattacttgag 2237
>gb|BT009400.1| Triticum aestivum clone wlm96.pk044.g9:fis, full insert mRNA sequence Length = 1993 Score = 44.1 bits (22), Expect = 0.47 Identities = 52/62 (83%) Strand = Plus / Plus Query: 106 ttcaacgccttctggtttacgcaccacctatttgctattgtgtatgcgctgctcatcgtc 165 |||||||||||||||| |||||||||| || | || || || ||||||||||||||| Sbjct: 636 ttcaacgccttctggtactcgcaccacctcttcgtcatcgtctacgcgctgctcatcgtc 695 Query: 166 ca 167 || Sbjct: 696 ca 697
>gb|AY821802.1| Medicago truncatula respiratory burst oxidase 2 mRNA, partial cds Length = 2685 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 196 tggtacaagaaaacgacatggatgta 221 ||||||||||||||||| |||||||| Sbjct: 1660 tggtacaagaaaacgacttggatgta 1685
>ref|NM_125394.1| Arabidopsis thaliana calcium ion binding / oxidoreductase/ superoxide-generating NADPH oxidase AT5G60010 mRNA, complete cds Length = 2520 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 414 tgaatggcatccattttccgttacatcagcaccaggagataattacttgagtgtccacat 473 ||||||||||||||| ||| | || || |||||||||||| | || || ||||| ||||| Sbjct: 1794 tgaatggcatccattctccatcacttctgcaccaggagatgactatttaagtgttcacat 1853 Query: 474 t 474 | Sbjct: 1854 t 1854
>gb|AC122316.3| Mus musculus BAC clone RP23-303G23 from 1, complete sequence Length = 171213 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 cctgggaatgtgttggctctttata 340 ||||||||||||| ||||||||||| Sbjct: 50993 cctgggaatgtgtaggctctttata 51017
>emb|AJ309006.1|NTA309006 Nicotiana tabacum mRNA for NADPH oxidase (rboh gene) Length = 3338 Score = 42.1 bits (21), Expect = 1.9 Identities = 129/165 (78%) Strand = Plus / Plus Query: 289 gttaagattcagaaggttgcggtatatcctgggaatgtgttggctctttatatgaccaag 348 ||||||||| |||||| || |||||||| || ||||||||||| ||| | ||| | || Sbjct: 2140 gttaagattttgaaggtggcagtatatccaggaaatgtgttggcacttcacatgtcaaaa 2199 Query: 349 ccacctggtttcagataccgaagtgggcagtacatctttataaattgcggcgctgtatct 408 |||| || | || |||| ||||||||| ||||| ||| | || || | || || ||| Sbjct: 2200 ccacagggctacaaatacaaaagtgggcaatacatgtttgtcaactgtgctgcagtttct 2259 Query: 409 ccatatgaatggcatccattttccgttacatcagcaccaggagat 453 |||| ||| |||||||||||||| |||| || || ||||||||| Sbjct: 2260 ccatttgagtggcatccattttcaattacttcggccccaggagat 2304
>gb|AC099727.13| Mus musculus chromosome 1, clone RP23-353O3, complete sequence Length = 222408 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 cctgggaatgtgttggctctttata 340 ||||||||||||| ||||||||||| Sbjct: 23884 cctgggaatgtgtaggctctttata 23908
>dbj|AK120739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N01, full insert sequence Length = 3515 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 gaaaacgacatggatgtacat 224 ||||||||||||||||||||| Sbjct: 2120 gaaaacgacatggatgtacat 2140
>emb|AJ320505.1|NTA320505 Nicotiana tabacum mRNA for NADPH oxidase (rbohF) Length = 2889 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 400 gctgtatctccatatgaatggcatccattttccgttacatcagcaccaggagataattac 459 ||||| ||||||| || ||||||||||||||| |||| ||||| || || ||| | ||| Sbjct: 2023 gctgtttctccattcgagtggcatccattttccattacttcagctcctggggatgactac 2082 Query: 460 ttgag 464 ||||| Sbjct: 2083 ttgag 2087
>gb|AF088276.1|AF088276 Lycopersicon esculentum NADPH oxidase (RBOH1) mRNA, complete cds Length = 3316 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 400 gctgtatctccatatgaatggcatccattttccgttacatcagcaccaggagataattac 459 ||||| ||||||| || ||||||||||||||| |||| ||||| || || ||| | ||| Sbjct: 2249 gctgtttctccattcgagtggcatccattttccattacttcagctcctggggatgactac 2308 Query: 460 ttgag 464 ||||| Sbjct: 2309 ttgag 2313
>gb|AY821801.1| Medicago truncatula respiratory burst oxidase 1 mRNA, partial cds Length = 2796 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 400 gctgtatctccatatgaatggcatccattttcc 432 ||||| |||||| ||||||||||||||||||| Sbjct: 1855 gctgtttctccacttgaatggcatccattttcc 1887
>dbj|AP004933.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094b, complete sequence Length = 65726 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 300 gaaggttgcggtatatcctgggaatgtgttggctctt 336 |||||| || || |||||||| ||||||||||||||| Sbjct: 41988 gaaggtggctgtttatcctggaaatgtgttggctctt 41952
>dbj|AB050660.1| Solanum tuberosum StrbohA mRNA for respiratory burst oxidase homolog, complete cds Length = 3733 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 400 gctgtatctccatatgaatggcatccattttccgttacatcagcaccaggagataattac 459 ||||| ||||||| || ||||||||||||||| |||| ||||| || || ||| | ||| Sbjct: 2117 gctgtttctccattcgagtggcatccattttccattacttcagctcctggggatgactac 2176 Query: 460 ttgag 464 ||||| Sbjct: 2177 ttgag 2181
>ref|NM_124165.2| Arabidopsis thaliana RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) AT5G47910 (RBOHD) mRNA, complete cds Length = 3201 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tggttccgacgtaacaagct 70 |||||||||||||||||||| Sbjct: 1748 tggttccgacgtaacaagct 1767
>ref|NM_101781.1| Arabidopsis thaliana calcium ion binding / oxidoreductase AT1G19230 mRNA, complete cds Length = 3329 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 414 tgaatggcatccattttccgttacatcagcaccaggagat 453 ||||||||| |||||||| |||| || |||||||||||| Sbjct: 1938 tgaatggcacccattttctattacctctgcaccaggagat 1977 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 194 agtggtacaagaaaacgacatggatgtacatc 225 ||||||| |||||||||| |||||||||||| Sbjct: 1715 agtggtatcagaaaacgacttggatgtacatc 1746
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 accaaggagtggtacaagaaaacg 210 |||||||| ||||||||||||||| Sbjct: 192431 accaaggattggtacaagaaaacg 192408
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 accaaggagtggtacaagaaaacg 210 |||||||| ||||||||||||||| Sbjct: 31786 accaaggattggtacaagaaaacg 31763
>gb|AC129017.4| Mus musculus BAC clone RP24-414A24 from chromosome 15, complete sequence Length = 153547 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 tatgaatggcatccattttc 431 |||||||||||||||||||| Sbjct: 102490 tatgaatggcatccattttc 102509
>gb|AF424625.1|AF424625 Arabidopsis thaliana AT5g47910/MCA23_25 mRNA, complete cds Length = 2999 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tggttccgacgtaacaagct 70 |||||||||||||||||||| Sbjct: 1748 tggttccgacgtaacaagct 1767
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 accaaggagtggtacaagaaaacg 210 |||||||| ||||||||||||||| Sbjct: 18928415 accaaggattggtacaagaaaacg 18928392
>gb|BT002651.1| Arabidopsis thaliana At5g47910/MCA23_25 gene, complete cds Length = 2766 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tggttccgacgtaacaagct 70 |||||||||||||||||||| Sbjct: 1606 tggttccgacgtaacaagct 1625
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 accaaggagtggtacaagaaaacg 210 |||| ||||||||||||||||||| Sbjct: 73301 accagggagtggtacaagaaaacg 73324
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tggttccgacgtaacaagct 70 |||||||||||||||||||| Sbjct: 77494 tggttccgacgtaacaagct 77513
>dbj|AK119267.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-A07, full insert sequence Length = 3154 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 accaaggagtggtacaagaaaacg 210 |||| ||||||||||||||||||| Sbjct: 2053 accagggagtggtacaagaaaacg 2030
>gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, complete sequence Length = 180605 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gttgtttagaagcaatgatg 286 |||||||||||||||||||| Sbjct: 97496 gttgtttagaagcaatgatg 97477
>emb|CT573509.1| Medicago truncatula chromosome 5 clone mth2-40e2, COMPLETE SEQUENCE Length = 109664 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ttttccgttacatcagcacc 446 |||||||||||||||||||| Sbjct: 73327 ttttccgttacatcagcacc 73346
>gb|AF055357.1|AF055357 Arabidopsis thaliana respiratory burst oxidase protein D (RbohD) mRNA, complete cds Length = 3035 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tggttccgacgtaacaagct 70 |||||||||||||||||||| Sbjct: 1737 tggttccgacgtaacaagct 1756
>emb|CT573216.1| Medicago truncatula chromosome 5 clone mte1-79f1, COMPLETE SEQUENCE Length = 117869 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ttttccgttacatcagcacc 446 |||||||||||||||||||| Sbjct: 106632 ttttccgttacatcagcacc 106613
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 accaaggagtggtacaagaaaacg 210 |||||||| ||||||||||||||| Sbjct: 19087237 accaaggattggtacaagaaaacg 19087214
>emb|CT030724.7| Mouse DNA sequence from clone RP24-63K13 on chromosome 9, complete sequence Length = 155546 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gcttatcctgtcttcttata 245 |||||||||||||||||||| Sbjct: 29620 gcttatcctgtcttcttata 29601
>gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosome 15, complete sequence Length = 203474 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tatgaatggcatccattttc 431 |||||||||||||||||||| Sbjct: 199541 tatgaatggcatccattttc 199522 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,823,229 Number of Sequences: 3902068 Number of extensions: 3823229 Number of successful extensions: 64575 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 64351 Number of HSP's gapped (non-prelim): 217 length of query: 545 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 522 effective length of database: 17,143,297,704 effective search space: 8948801401488 effective search space used: 8948801401488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)