ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7o13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 844 0.0
2gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 844 0.0
3gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 844 0.0
4emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 797 0.0
5emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 793 0.0
6emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 622 e-175
7emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 543 e-151
8emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 543 e-151
9gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 480 e-132
10emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 371 1e-99
11gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 250 3e-63
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 192 7e-46
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 180 3e-42
14dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, compl... 111 2e-21
15emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene 80 7e-12
16emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin 80 7e-12
17emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene 80 7e-12
18gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precur... 80 7e-12
19dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3,... 80 7e-12
20dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, compl... 80 7e-12
21emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene 72 2e-09
22emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin 62 2e-06
23emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin 58 3e-05
24gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) g... 58 3e-05
25emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese ... 56 1e-04
26emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin 56 1e-04
27gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 42 1.5
28ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on ... 40 5.9
29gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, co... 40 5.9
30emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on ch... 40 5.9
31gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, compl... 40 5.9
32gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6... 40 5.9
33dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, ... 40 5.9 
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  844 bits (426), Expect = 0.0
 Identities = 438/442 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 103

                                                                       
Query: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctggagcaggtccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgc 163

                                                                       
Query: 121 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tacaacgcctgccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgt 223

                                                                       
Query: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 283

                                                                       
Query: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 300
           |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 284 tccggtgaaccaaatgcgactgagtactgcacaattggatgccggacttccgtctgtgac 343

                                                                       
Query: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 403

                                                                       
Query: 361 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 463

                                 
Query: 421 cttcttgggcatgatttctatg 442
           ||||||||||||||||||||||
Sbjct: 464 cttcttgggcatgatttctatg 485
to top
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  844 bits (426), Expect = 0.0
 Identities = 438/442 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 103

                                                                       
Query: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctggagcaggtccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgc 163

                                                                       
Query: 121 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tacaacgcctgccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgt 223

                                                                       
Query: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 283

                                                                       
Query: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 300
           |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 284 tccggtgaaccaaatgcgactgagtactgcacaattggatgccggacttccgtctgtgac 343

                                                                       
Query: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 403

                                                                       
Query: 361 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 463

                                 
Query: 421 cttcttgggcatgatttctatg 442
           ||||||||||||||||||||||
Sbjct: 464 cttcttgggcatgatttctatg 485
to top
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  844 bits (426), Expect = 0.0
 Identities = 438/442 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 103

                                                                       
Query: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctggagcaggtccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgc 163

                                                                       
Query: 121 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tacaacgcctgccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgt 223

                                                                       
Query: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 283

                                                                       
Query: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 300
           |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 284 tccggtgaaccaaatgcgactgagtactgcacaattggatgccggacttccgtctgtgac 343

                                                                       
Query: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 403

                                                                       
Query: 361 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 463

                                 
Query: 421 cttcttgggcatgatttctatg 442
           ||||||||||||||||||||||
Sbjct: 464 cttcttgggcatgatttctatg 485
to top
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  797 bits (402), Expect = 0.0
 Identities = 411/414 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60

                                                                       
Query: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120

                                                                       
Query: 121 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaacgcctgccatttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180

                                                                       
Query: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240

                                                                       
Query: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctgtgac 300

                                                                       
Query: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360

                                                                 
Query: 361 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaa 414
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 gcatgtgcccgtttctgtaatgatggtgatgtcattcagtctgttgaagcctaa 414
to top
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  793 bits (400), Expect = 0.0
 Identities = 409/412 (99%)
 Strand = Plus / Plus

                                                                       
Query: 31  gttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagt 90
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagt 60

                                                                       
Query: 91  tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgccggtggttcc 150
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61  tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgctggtggttcc 120

                                                                       
Query: 151 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 180

                                                                       
Query: 211 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 240

                                                                       
Query: 271 acaattggatgcaggacttccgtttgtgacaacatggacaatgtttcccgtggccaagag 330
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaattggatgcaggacttccgtctgtgacaacatggacaatgtttcccgtggccaagag 300

                                                                       
Query: 331 atgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaa 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaa 360

                                                               
Query: 391 gtcattcagtctgttgaagcctaatcatgccttcttgggcatgatttctatg 442
           |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcattcagtctcttgaagcctaatcatgccttcttgggcatgatttctatg 412
to top
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  622 bits (314), Expect = e-175
 Identities = 323/326 (99%)
 Strand = Plus / Plus

                                                                       
Query: 117 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 60

                                                                       
Query: 177 ttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccc 236
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgtaaaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccc 120

                                                                       
Query: 237 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttg 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctg 180

                                                                       
Query: 297 tgacaacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 356
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacaacctggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 240

                                                                       
Query: 357 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 300

                                     
Query: 417 atgccttcttgggcatgatttctatg 442
           ||||||||||||||||||||||||||
Sbjct: 301 atgccttcttgggcatgatttctatg 326
to top
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  543 bits (274), Expect = e-151
 Identities = 400/442 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
           |||||| ||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||
Sbjct: 19  atggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagtt 78

                                                                       
Query: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
           |||||||||||||| || || || || |||||||||||| |||||   |  |||||||||
Sbjct: 79  ctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgc 138

                                                                       
Query: 121 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
           |||||| | |||| |||||| ||||||||||| ||||||||||||  ||||||| |||||
Sbjct: 139 tacaacacttgccatttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgt 198

                                                                       
Query: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
           ||||||||||| || |||| ||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 199 aaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaa 258

                                                                       
Query: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 300
           |||||||||||| |||  ||  |||||||||| ||||||||||||| ||| || ||||||
Sbjct: 259 tccggtgaaccagatgtcacgcagtactgcaccattggatgcaggaattctgtctgtgac 318

                                                                       
Query: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aacatggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaac 378

                                                                       
Query: 361 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 379 gcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgc 438

                                 
Query: 421 cttcttgggcatgatttctatg 442
           ||||||| ||||||||||||||
Sbjct: 439 cttcttgtgcatgatttctatg 460
to top
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  543 bits (274), Expect = e-151
 Identities = 400/442 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
           |||||| ||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||
Sbjct: 26  atggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagtt 85

                                                                       
Query: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
           |||||||||||||| || || || || |||||||||||| |||||   |  |||||||||
Sbjct: 86  ctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgc 145

                                                                       
Query: 121 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
           |||||| | ||||||||||| ||||||||||| ||||||||||||  ||||||| |||||
Sbjct: 146 tacaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgt 205

                                                                       
Query: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
           ||||||||||| || |||| ||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 206 aaaatcataagtggtccaaaatgccctagtgactatcctaaacttaatcttctccctgaa 265

                                                                       
Query: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 300
           |||||||||||| |||  ||| |||||||||| ||||||||||||| ||| || ||||||
Sbjct: 266 tccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgac 325

                                                                       
Query: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aacatggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaac 385

                                                                       
Query: 361 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 420
           |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 386 gcatgtgcccgtttttgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgc 445

                                 
Query: 421 cttcttgggcatgatttctatg 442
           ||||||| ||||||||||||||
Sbjct: 446 cttcttgtgcatgatttctatg 467
to top
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  480 bits (242), Expect = e-132
 Identities = 245/246 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1552 atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 1611

                                                                        
Query: 61   ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1612 ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 1671

                                                                        
Query: 121  tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1672 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 1731

                                                                        
Query: 181  aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1732 aaaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccctgaa 1791

                  
Query: 241  tccggt 246
            ||||||
Sbjct: 1792 tccggt 1797



 Score =  250 bits (126), Expect = 3e-63
 Identities = 129/130 (99%)
 Strand = Plus / Plus

                                                                        
Query: 313  gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2054 gtttcccgtggccaagagatgaaatttgacatgggactctgcagcaacgcatgtgcccgt 2113

                                                                        
Query: 373  ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 2173

                      
Query: 433  gatttctatg 442
            ||||||||||
Sbjct: 2174 gatttctatg 2183



 Score =  131 bits (66), Expect = 2e-27
 Identities = 69/70 (98%)
 Strand = Plus / Plus

                                                                        
Query: 244  ggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 303
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 ggtgaaccaaatgtgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 1953

                      
Query: 304  atggacaatg 313
            ||||||||||
Sbjct: 1954 atggacaatg 1963
to top
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  371 bits (187), Expect = 1e-99
 Identities = 262/287 (91%)
 Strand = Plus / Plus

                                                                       
Query: 156 agtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagggacta 215
           ||||||||||  ||||||| |||||||||||||||| || |||| ||| ||||| |||||
Sbjct: 1   agtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgacta 60

                                                                       
Query: 216 tcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgcacaat 275
           |||||| || ||||||||||||||||||||||||||  |||  ||| |||||||||| ||
Sbjct: 61  tcctaaacttaatcttctccctgaatccggtgaacccgatgtcactcagtactgcaccat 120

                                                                       
Query: 276 tggatgcaggacttccgtttgtgacaacatggacaatgtttcccgtggccaagagatgaa 335
           ||||||||||| ||| || |||||||||||||||||||||| || |||||||||||||||
Sbjct: 121 tggatgcaggaattctgtctgtgacaacatggacaatgttttccatggccaagagatgaa 180

                                                                       
Query: 336 attcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaagtcat 395
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 181 attcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgcagtcat 240

                                                          
Query: 396 tcagtctgttgaagcctaatcatgccttcttgggcatgatttctatg 442
           ||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 241 tcagtctgttgaatcctaatcatgccttcttgtgcatgatttctatg 287
to top
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  250 bits (126), Expect = 3e-63
 Identities = 216/246 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
            |||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||| |||||||
Sbjct: 1531 atggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactggttttagtt 1590

                                                                        
Query: 61   ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
            |||||||||||||| || || || || |||||||||||| |||||   |  |||||||||
Sbjct: 1591 ctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgc 1650

                                                                        
Query: 121  tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
            |||||| | ||||||||||| ||||||||||| ||||||||||||  ||||||| |||||
Sbjct: 1651 tacaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgt 1710

                                                                        
Query: 181  aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
            ||||||||||| || |||| ||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 1711 aaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaa 1770

                  
Query: 241  tccggt 246
            ||||||
Sbjct: 1771 tccggt 1776



 Score =  234 bits (118), Expect = 2e-58
 Identities = 127/130 (97%)
 Strand = Plus / Plus

                                                                        
Query: 313  gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 2090

                                                                        
Query: 373  ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 432
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2091 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcat 2150

                      
Query: 433  gatttctatg 442
            ||||||||||
Sbjct: 2151 gatttctatg 2160



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                        
Query: 244  ggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 303
            ||||||||| |||  ||| |||||||||| |||||||||| || ||| || |||||||||
Sbjct: 1868 ggtgaaccagatgtcactcagtactgcaccattggatgcacgaattctgtctgtgacaac 1927

                      
Query: 304  atggacaatg 313
            ||||||||||
Sbjct: 1928 atggacaatg 1937
to top
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  192 bits (97), Expect = 7e-46
 Identities = 354/439 (80%), Gaps = 3/439 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60
           |||||||||| |||  || ||||| | |||||  ||||||| ||| || | |||||||||
Sbjct: 49  atggcaaccaccaaaggtcttaagtgtgtggtgctttgtgtcctcgtactaggtttagtt 108

                                                                       
Query: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120
           |||| ||||||||| ||||| || ||||||||||||  || |||  | |  |||||||||
Sbjct: 109 ctggggcaggtccaggtagagggaaagagttgctgcccgagcacatctgcaagaaactgc 168

                                                                       
Query: 121 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180
           || |||| |||||||||  |||||  |||||| |||  ||||||| ||  |||||| |||
Sbjct: 169 tataacgtctgccgtttaaccggtacttcccggccacgctgcgcatctctttgtggatgt 228

                                                                       
Query: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240
           |||||| ||  |||   ||||||||||   | |||| |||| ||| ||||||| | ||||
Sbjct: 229 aaaatcgtagacgg---aacatgtcctgatggctattctaaactgcatcttctacttgaa 285

                                                                       
Query: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 300
           |||||||||||  |||  |||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 286 tccggtgaaccggatgtcactgagtactgcaccataggatgcatgacttccgtttgtgac 345

                                                                       
Query: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360
           |||||||||||||||   | |||||||||||||||| ||||||||  |||||||| ||| 
Sbjct: 346 aacatggacaatgttattcatggccaagagatgaaaatcgacatgctactctgcaacaaa 405

                                                                       
Query: 361 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgc 420
           | |||||  |||||||||||  | ||||  |||||||  ||| |  |||| |||||||||
Sbjct: 406 gaatgtgttcgtttctgtaacaagggtgccgtcattccatctttccaagcttaatcatgc 465

                              
Query: 421 cttcttgggcatgatttct 439
             ||||| |||||||||||
Sbjct: 466 actcttgtgcatgatttct 484
to top
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score =  180 bits (91), Expect = 3e-42
 Identities = 229/275 (83%)
 Strand = Plus / Plus

                                                                       
Query: 31  gttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagt 90
           ||||||||| | |||||  ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 112 gttatttgtttcctcatgctgggtttagttctggagcaggtccaggtagagggcaagagt 171

                                                                       
Query: 91  tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgccggtggttcc 150
           |||||||||| ||||||||  | |||||||||||| | ||||||||| || |||| | | 
Sbjct: 172 tgctgcaagagcacgacggcaataaactgctacaatgtctgccgtttagctggtgctccg 231

                                                                       
Query: 151 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 210
           || ||||||||||||  | | |||||||||||| || ||  ||   |||| ||||| || 
Sbjct: 232 cgcccagtctgcgcaggtccatgtggttgtaaactcttagacgttacaacttgtccaagt 291

                                                                       
Query: 211 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 270
           || |  ||||| | | |||||||| |||||| ||||||| || ||||  |||||||||||
Sbjct: 292 gattggcctaaacagcatcttctctctgaatacggtgaagcagatgcagctgagtactgc 351

                                              
Query: 271 acaattggatgcaggacttccgtttgtgacaacat 305
           || |||||||||| |||||||||||||||||||||
Sbjct: 352 actattggatgcatgacttccgtttgtgacaacat 386



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 319 cgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgt 378
           |||||||||||||||||  ||||||||  | |||||| ||||||||||| ||||||||||
Sbjct: 415 cgtggccaagagatgaacatcgacatgcaagtctgcaacaacgcatgtgtccgtttctgt 474

             
Query: 379 aa 380
           ||
Sbjct: 475 aa 476
to top
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds
          Length = 616

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                       
Query: 20  ttaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtag 79
           ||||||| ||||| |||||||||||  |||||||  ||||||||||||| ||||||||||
Sbjct: 42  ttaagagtgtggtcatttgtgttcttgtattggggatagttctggagcatgtccaagtag 101

                                                           
Query: 80  aaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacg 127
           | || ||||||||||||||| |||| ||||  ||||||||||||||||
Sbjct: 102 agggaaagagttgctgcaaggacaccacggcaagaaactgctacaacg 149
to top
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene
          Length = 892

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||||| |||||||||||||||||||||||||||| |
Sbjct: 49  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 108

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||    || |||||||||||||||
Sbjct: 109 accctaggaagaaactgctacaac 132
to top
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin
          Length = 641

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||||| ||||||||||||||||||||||||| || |
Sbjct: 106 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 165

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||   ||| |||||||||||||||
Sbjct: 166 accctgggaagaaactgctacaac 189
to top
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene
          Length = 901

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||||| ||||||||||||||||||||||||| || |
Sbjct: 49  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 108

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||   ||| |||||||||||||||
Sbjct: 109 accctgggaagaaactgctacaac 132
to top
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds
          Length = 673

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||||| |||||||||||||||||||||||||||| |
Sbjct: 57  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 116

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||    || |||||||||||||||
Sbjct: 117 accctaggaagaaactgctacaac 140
to top
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds
          Length = 915

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||||| ||||||||||||||||||||||||| || |
Sbjct: 94  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 153

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||   ||| |||||||||||||||
Sbjct: 154 accctgggaagaaactgctacaac 177
to top
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds
          Length = 677

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 20  ttaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtag 79
           ||||||| || || |||||||| ||  |||||||  ||||||||||||||||||||||||
Sbjct: 43  ttaagagtgtagtcatttgtgtccttgtattggggatagttctggagcaggtccaagtag 102

                               
Query: 80  aaggcaagagttgctgcaag 99
           | || |||||||||||||||
Sbjct: 103 agggaaagagttgctgcaag 122
to top
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene
          Length = 897

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||||| ||||||||||| |||||||||||||||| |
Sbjct: 49  ctcatactggggttggttctggaacaggtgcaagtagaaggaaagagttgctgcaagagc 108

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||    || |||||||||||||||
Sbjct: 109 accctaggaagaaactgctacaac 132
to top
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin
          Length = 535

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgca 97
           |||||| |||| || |||||||| || || |||||||||||||||||||||||||
Sbjct: 73  ctcatactggggttggttctggaacatgtgcaagtagaaggcaagagttgctgca 127
to top
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin
          Length = 569

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 58  gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 117
           ||||| || ||||| ||||||||||||||||||||||||| || |||    || ||||||
Sbjct: 39  gttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcaccctaggaagaaac 98

                    
Query: 118 tgctacaac 126
           |||||||||
Sbjct: 99  tgctacaac 107
to top
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds
          Length = 1805

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 58  gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 117
           ||||| || ||||| ||||||||||||||||||||||||| || |||    || ||||||
Sbjct: 417 gttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcaccctaggaagaaac 476

                    
Query: 118 tgctacaac 126
           |||||||||
Sbjct: 477 tgctacaac 485
to top
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring
          Length = 888

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||| | || |||||||||||||| ||||||| || |
Sbjct: 49  ctcatactggggttggttctggaacagctgcaggtagaaggcaagagctgctgcaggagc 108

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||   ||| |||||||||||||||
Sbjct: 109 accctgggaagaaactgctacaac 132
to top
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin
          Length = 567

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 102
           |||||| |||| || |||||||| ||| | || |||||||||||||| ||||||| || |
Sbjct: 8   ctcatactggggttggttctggaacagctgcaggtagaaggcaagagctgctgcaggagc 67

                                   
Query: 103 acgacgggcagaaactgctacaac 126
           ||   ||| |||||||||||||||
Sbjct: 68  accctgggaagaaactgctacaac 91
to top
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 287   cttccgtttgtgacaacatggacaa 311
             ||||| |||||||||||||||||||
Sbjct: 87262 cttccatttgtgacaacatggacaa 87238
to top
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15
          Length = 1523

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  agagttgctgcaagaacacg 105
           ||||||||||||||||||||
Sbjct: 966 agagttgctgcaagaacacg 947
to top
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence
          Length = 173428

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    agagttgctgcaagaacacg 105
             ||||||||||||||||||||
Sbjct: 54190 agagttgctgcaagaacacg 54209
to top
>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete
              sequence
          Length = 159981

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      gcaaccaacaagagtattaa 23
              ||||||||||||||||||||
Sbjct: 131976 gcaaccaacaagagtattaa 131995
to top
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence
          Length = 175838

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ttgtgttctcatattgggtt 55
              ||||||||||||||||||||
Sbjct: 112957 ttgtgttctcatattgggtt 112938
to top
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence
          Length = 172551

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ttgtgttctcatattgggtt 55
             ||||||||||||||||||||
Sbjct: 31663 ttgtgttctcatattgggtt 31644
to top
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete
             sequences
          Length = 135513

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   gtttgtgacaacatggacaa 311
             ||||||||||||||||||||
Sbjct: 53200 gtttgtgacaacatggacaa 53181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,210,688
Number of Sequences: 3902068
Number of extensions: 3210688
Number of successful extensions: 53803
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53744
Number of HSP's gapped (non-prelim): 50
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top