ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7o08 |
|---|---|
| Clone Library Name | barley_pub |
>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)| Length = 303 Score = 126 bits (317), Expect = 4e-29 Identities = 75/146 (51%), Positives = 93/146 (63%), Gaps = 5/146 (3%) Frame = +1 Query: 175 ARATDMASPQCCANPPTLN----PAAGEGKVV-DSFGGIKAYVAGAQESKAAVVLISDVF 339 A T A QC NPP + A G+VV D GG++AYV+GA S AVVL SDVF Sbjct: 19 AATTAEAHSQCLDNPPDRSIHGRQLAEAGEVVHDLPGGLRAYVSGAASSSRAVVLASDVF 78 Query: 340 GFGAPNLRKIADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPV 519 G+ AP LR+I DKVA +GYFVVVPDFL GD Y+ D + W++ H+ KA E+AKP+ Sbjct: 79 GYEAPLLRQIVDKVAKAGYFVVVPDFLKGD-YL--DDKKNFTEWLEAHSPVKAAEDAKPL 135 Query: 520 IAALKEQGASSVGAAGYCWGAKVVAE 597 AALK++G SV GYCWG K+ E Sbjct: 136 FAALKKEG-KSVAVGGYCWGGKLSVE 160
>YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II| Length = 249 Score = 63.9 bits (154), Expect = 3e-10 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Frame = +1 Query: 205 CCANPPTLNPAAG-------EGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLR 363 CC PT AA +GK +++FGG+ YV G+ + ++ D+FG + ++ Sbjct: 4 CC---PTSRGAAASNKSYTFKGKEIENFGGLTTYVVGSTSNTRVLIGFMDIFGL-SDQIK 59 Query: 364 KIADKVAASGYFVVVPDFLHGDPY--------VPEDADRPIAVWIKEHTAGKAFEEAKPV 519 + ADK+A G+ V +PDFL G P PED + + + + V Sbjct: 60 EGADKLADDGFTVYLPDFLEGKPLPVTALPPKTPEDQKLCNDFFSTRISPNLHWPKLAKV 119 Query: 520 IAALKEQGASSV--GAAGYCWGAKVV 591 + A++ +V G G+CWGAKV+ Sbjct: 120 VEAVRANHGPNVTIGTYGFCWGAKVL 145
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 61.2 bits (147), Expect = 2e-09 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 4/113 (3%) Frame = +1 Query: 271 GIKAYVAGAQESKAAVVLI-SDVFGFGAPNLRKIADKVAASGYFVVVPDFLHGDPYVPED 447 G+ Y AG+ K V++I +DV+G N+ ADK A++GY V VPD L GD Sbjct: 29 GLDTYAAGSTSPKEKVIVILTDVYGNKFNNVLLTADKFASAGYMVFVPDILFGDAI---S 85 Query: 448 ADRPI--AVWIKEHTAGKAFEEAKPVIAALK-EQGASSVGAAGYCWGAKVVAE 597 +D+PI W + H+ + + LK E +G GYC+GAK + Sbjct: 86 SDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQ 138
>DLHH_AQUAE (O67802) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 231 Score = 40.8 bits (94), Expect = 0.003 Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 6/108 (5%) Frame = +1 Query: 274 IKAYVAGAQESKAAVVLISDVFGFGAP--NLRKIADKVAASGYFVVVPDFLHGDPYV--P 441 ++ Y+A + + AV++ + +G +P N+++I DK+A G+ PDF G Y P Sbjct: 14 VRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQ-YADNP 72 Query: 442 EDADRPIAVWIKEH--TAGKAFEEAKPVIAALKEQGASSVGAAGYCWG 579 +DA + + ++ + F+ + + + VG G+C G Sbjct: 73 DDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCG 120
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 40.8 bits (94), Expect = 0.003 Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 7/124 (5%) Frame = +1 Query: 238 AGEGKVVDSFGGIKAYVAGAQESKA--AVVLISDVFGFGAPNLRKIADKVAASGYFVVVP 411 AGE K+ G I AY A E ++++ ++FG +++ + ++A GYF + P Sbjct: 53 AGEVKIPMQDGVIPAYRAMPAEGGPFPTILVVQEIFGVHE-HIKDVCRRLAKLGYFALAP 111 Query: 412 DFL--HGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASS---VGAAGYCW 576 + GD D + ++ + + + + +A K G + +G G+CW Sbjct: 112 ELYARQGDVSTLTDIQQIVSEVVSKVPDDQVMSDLDAAVAFAKGTGKADTARLGITGFCW 171 Query: 577 GAKV 588 G ++ Sbjct: 172 GGRI 175
>THIG_METCA (Q609Z5) Thiazole biosynthesis protein thiG| Length = 270 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/71 (32%), Positives = 29/71 (40%) Frame = -1 Query: 404 TTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLS 225 T KY D A A GA + RT D P+ +IPP T LP+ A + Sbjct: 30 TGKYKDLAETRAAVEMAGAEIVTVAIRRTNIGQDPGQPSLLDVIPPDRYTILPNTAGCYT 89 Query: 224 VGGFAQHCGLA 192 V + C LA Sbjct: 90 VEDAVRTCRLA 100
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 32.0 bits (71), Expect = 1.4 Identities = 25/94 (26%), Positives = 38/94 (40%) Frame = -1 Query: 518 TGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNP 339 TGFA+ N + S H L+A + T G + T+ P T A + P+P Sbjct: 437 TGFAAPNTTTGLPSSTHVPTNLTAPAST-GPTVSTADVTSPTPAGTTSGASPV---TPSP 492 Query: 338 KTSEMRTTAALDSWAPATYALIPPKLSTTLPSPA 237 + T + T A+ P + T P+PA Sbjct: 493 SPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 32.0 bits (71), Expect = 1.4 Identities = 25/94 (26%), Positives = 38/94 (40%) Frame = -1 Query: 518 TGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNP 339 TGFA+ N + S H L+A + T G + T+ P T A + P+P Sbjct: 437 TGFAAPNTTTGLPSSTHVPTNLTAPAST-GPTVSTADVTSPTPAGTTSGASPV---TPSP 492 Query: 338 KTSEMRTTAALDSWAPATYALIPPKLSTTLPSPA 237 + T + T A+ P + T P+PA Sbjct: 493 SPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
>FUT1_HUMAN (P19526) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) (Blood group H alpha 2-fucosyltransferase) Length = 365 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = -1 Query: 488 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 309 A+ L TA+G +ASS P SGT T YP+ RFG + + + A Sbjct: 53 AIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNG--------RFGNQMGQYATLLALAQ 104 Query: 308 LDS----WAPATYALIPPKLSTTLP 246 L+ PA +A + P TLP Sbjct: 105 LNGRRAFILPAMHAALAPVFRITLP 129
>FUT1_PANTR (Q9TUD6) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) Length = 366 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = -1 Query: 488 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 309 A+ L TA+G +ASS P SGT T YP+ RFG + + + A Sbjct: 54 AIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNG--------RFGNQMGQYATLLALAQ 105 Query: 308 LDS----WAPATYALIPPKLSTTLP 246 L+ PA +A + P TLP Sbjct: 106 LNGRRAFILPAMHAALAPVFRITLP 130
>FUT1_GORGO (Q9TUD4) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) Length = 366 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = -1 Query: 488 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 309 A+ L TA+G +ASS P SGT T YP+ RFG + + + A Sbjct: 54 AIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNG--------RFGNQMGQYATLLALAQ 105 Query: 308 LDS----WAPATYALIPPKLSTTLP 246 L+ PA +A + P TLP Sbjct: 106 LNGRRAFILPAMHAALAPVFRITLP 130
>TTC15_HUMAN (Q8WVT3) Tetratricopeptide repeat protein 15 (TPR repeat protein| 15) Length = 735 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/70 (30%), Positives = 31/70 (44%) Frame = +1 Query: 127 PIPISSPGNHSRPSPPARATDMASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQES 306 P P++ PG RP P A M PQ A P + P F I+A AG+ + Sbjct: 248 PPPLAVPGTEGRPEPVA----MRGPQAAAPPASPEP----------FAHIQAVFAGSDDP 293 Query: 307 KAAVVLISDV 336 A + +S++ Sbjct: 294 FATALSMSEM 303
>SP6_MOUSE (Q9ESX2) Transcription factor Sp6 (Krueppel-like factor 14)| (Epiprofin) Length = 376 Score = 31.2 bits (69), Expect = 2.4 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +1 Query: 136 ISSPGNHSRPSPPARATDMASPQCCANPPT-----LNPAAGEGKVVDSFGGIKAYVAGAQ 300 ++SPG H PA + Q CA PP L PAAG ++ G KA A AQ Sbjct: 139 LTSPG-HPGALQPALGGYVGDHQLCAPPPHPHPHHLLPAAGGQHLLGPPDGAKALEAAAQ 197 Query: 301 ESK 309 ES+ Sbjct: 198 ESQ 200
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG repeat| protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 31.2 bits (69), Expect = 2.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -2 Query: 142 MRLGLGSGPSDSAAATRNKWGEKDSGRVT 56 +R+G G G SD+ + WGE SGR+T Sbjct: 1752 LRIGGGWGNSDARYTPGSSWGESSSGRIT 1780
>YDHP_ECOLI (P77389) Inner membrane transport protein ydhP| Length = 389 Score = 30.8 bits (68), Expect = 3.1 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 8/119 (6%) Frame = -1 Query: 503 SNAFPAVCSLIHTAIGLSASSGTY--GSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTS 330 ++A P + + IG+ S G Y G +S T L I L P + Sbjct: 232 THATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAI--PFLARN 289 Query: 329 EMRTTAALDSWAPATYALIPP------KLSTTLPSPAAGLSVGGFAQHCGLAMSVARAG 171 E ++ W AT+A++PP ++++ P ++ +++G F + G A+ A G Sbjct: 290 EFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAF--NLGNALGAAAGG 346
>IMD_ARTGO (Q44052) Isomalto-dextranase precursor (EC 3.2.1.94) (Glucan| 1,6-alpha-isomaltosidase) (Exo-isomaltohydrolase) Length = 641 Score = 30.4 bits (67), Expect = 4.1 Identities = 22/68 (32%), Positives = 31/68 (45%) Frame = -1 Query: 329 EMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQHCGLAMSVARAGGEGRE*L 150 + R TAAL A A + + PPK+ T PAA + GG G + G +G + Sbjct: 474 DSRATAALAPHASAIFRVTPPKMHGTTRYPAAFAAWGG-----GAGFNNNHPGYDGNGFV 528 Query: 149 PGDEIGIG 126 G + G G Sbjct: 529 DGLQAGSG 536
>SOX3_HUMAN (P41225) Transcription factor SOX-3| Length = 446 Score = 30.4 bits (67), Expect = 4.1 Identities = 23/73 (31%), Positives = 28/73 (38%) Frame = -1 Query: 386 AATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQ 207 A T S AP P T A APA Y+L+ +L + +P GG A Sbjct: 43 APTESQGLFTVAAPAPGAPSPPATLAHLLPAPAMYSLLETELKNPVGTPTQAAGTGGPAA 102 Query: 206 HCGLAMSVARAGG 168 G S A A G Sbjct: 103 PGGAGKSSANAAG 115
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 27.7 bits (60), Expect(2) = 5.3 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 139 SSPGNHSRPSPPARATDMASPQCCANP-PTLNPAAGEGKVVDS 264 S P +P P A+ P+ + P PTLNP + G+ VDS Sbjct: 490 SPPSGLVKPIPAHSASASPPPRPPSTPSPTLNPGSPPGRSVDS 532 Score = 20.8 bits (42), Expect(2) = 5.3 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 Query: 96 VAAALSLGPLPNPNLIARQSLSPL 167 V + +GP P +L A SLS L Sbjct: 435 VGVGVGVGPAPFSHLSASSSLSSL 458
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Frame = -1 Query: 458 GLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYA 279 G S SSGT S S TT P ++ +P+ +++ +TAA S AP+T + Sbjct: 39 GQSTSSGTTNS---SSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTAS 95 Query: 278 ---LIPPKLS--TTLPSPAA 234 IP S TT +P A Sbjct: 96 STTSIPTSTSTETTTTTPTA 115
>GATA1_ARATH (Q8LAU9) GATA transcription factor 1 (AtGATA-1)| Length = 274 Score = 30.0 bits (66), Expect = 5.3 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 4/101 (3%) Frame = -1 Query: 452 SASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDS---WAPATY 282 ++S G+ GS + TTT T+ + + F AP S+ R T D W Sbjct: 120 NSSGGSNGSTAVATTTTTP-----TIMSCCVGFKAPAKARSKRRRTGRRDLRVLWTGNEQ 174 Query: 281 ALIPPKLSTTLPSPAAGLSVGGFAQHCGLAMSVA-RAGGEG 162 I K + T+ AA L +G QHCG + RAG G Sbjct: 175 GGIQKKKTMTVA--AAALIMGRKCQHCGAEKTPQWRAGPAG 213
>PO2F3_MOUSE (P31362) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1) Length = 431 Score = 30.0 bits (66), Expect = 5.3 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 19/74 (25%) Frame = +1 Query: 52 RQSRVRCP-----SPPIYFVSLRRCRSVRFPIPIS--------------SPGNHSRPSPP 174 ++ R+ CP PPIY L P+ + SPGN+SRPS P Sbjct: 328 KEKRINCPVATPVKPPIYNSRLVSPSGSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSP 387 Query: 175 ARATDMASPQCCAN 216 +SP N Sbjct: 388 GSGLHASSPTASQN 401
>SMC5_SCHPO (O13710) Structural maintenance of chromosome 5 (DNA repair protein| spr18) (SMC partner of rad18) Length = 1065 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -2 Query: 478 P*STLLLVCQRLQVHMDPHARNLAPQRNIQTQQLYRLSSSDSALQT 341 P L+ +C L++H P A+ P ++ +RL++ D L+T Sbjct: 541 PEVVLVALCHMLKIHQIPIAKRELPPASVNALNNFRLANGDPVLKT 586
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = +1 Query: 73 PSPPIYFVSLRRCRSVRFPIPISSPGNHS---RPSPPARATDMASPQCCANPPTL 228 PS P+ +L S P P ++PG H+ PSPP++ + P+ +P TL Sbjct: 439 PSSPVAVAALAHPPSGLHPAPSTAPGPHAPLMPPSPPSQVLPASEPK--RHPSTL 491
>IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Iroquois| homeobox protein 3) (Homeodomain protein IRXB1) Length = 507 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +1 Query: 217 PPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFG--FGAPNLRKIADKVAAS 390 PP AAG G S GG AGA E AA +S+V +GAP A AA Sbjct: 16 PPERPGAAGGGGGGSSAGGRSGPGAGASE-LAASGSLSNVLSSVYGAPYAAAAAAAAAAQ 74 Query: 391 GYFVVVP 411 GY +P Sbjct: 75 GYGAFLP 81
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Frame = -1 Query: 458 GLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYA 279 G S SSGT S S TT P ++ +P+ +++ +TAA S AP+T + Sbjct: 39 GQSTSSGTTNS---SSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTAS 95 Query: 278 ---LIPPKLS--TTLPSPAA 234 IP S TT +P A Sbjct: 96 STTSIPTSTSTETTTTTPTA 115
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 30.0 bits (66), Expect = 5.3 Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 15/144 (10%) Frame = -1 Query: 545 APCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKK----SGTTTKYPDAAT 378 AP S + + P H+A GL A++ +G+P G+T + A Sbjct: 989 APASTIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASSQPAFGGSTAVFSFGAA 1048 Query: 377 LSAIFLRFGAPNPKTSEMRTTAALDSWAPATYAL---IPP----KLSTTLPSPAAGLSVG 219 S+ FGA S +++ S P+ + P + +P + + G Sbjct: 1049 TSS---GFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTG 1105 Query: 218 GFAQHCGLAMSVARA----GGEGR 159 F+ G + S A + GG G+ Sbjct: 1106 AFSFGAGQSGSTATSTPFTGGLGQ 1129
>PO2F3_HUMAN (Q9UKI9) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein) Length = 436 Score = 29.6 bits (65), Expect = 6.9 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 19/74 (25%) Frame = +1 Query: 52 RQSRVRCP-----SPPIYFVSLRRCRSVRFPIPIS--------------SPGNHSRPSPP 174 ++ R+ CP PP+Y L P+ + SPGN+SRPS P Sbjct: 335 KEKRINCPVATPIKPPVYNSRLVSPSGSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSP 394 Query: 175 ARATDMASPQCCAN 216 +SP N Sbjct: 395 GSGLHASSPTASQN 408
>Y010_MYCTU (P71580) Hypothetical protein Rv0010c/MT0013| Length = 141 Score = 29.6 bits (65), Expect = 6.9 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = -3 Query: 432 WIPMQEIWHHN-EISRRSNFIGYLPQIRRSKPEDVGDENYGGLGLLGAGDVRLDPAEAVD 256 W Q + H N +I R F Y +R + E V GGL +L D+ DP E +D Sbjct: 73 WFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVS----GGLLILSRWDLGTDPVEVLD 128 Query: 255 DLALAG 238 L AG Sbjct: 129 ALTAAG 134
>ILEU_HORSE (P05619) Leukocyte elastase inhibitor (LEI) (Serpin B1)| Length = 379 Score = 29.6 bits (65), Expect = 6.9 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Frame = +1 Query: 322 LISDVFGFGAPNLRKIADKVAASGYFVVVPDFLHGDPYV-------------PEDADRPI 462 L +D+ GAP + K+A+++ + + DFL + PEDA + I Sbjct: 73 LNADINKPGAPYILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQAPEDARKEI 132 Query: 463 AVWIKEHTAGK 495 W+K T GK Sbjct: 133 NEWVKGQTEGK 143
>YDHP_ECO57 (Q8X625) Inner membrane transport protein ydhP| Length = 389 Score = 29.6 bits (65), Expect = 6.9 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 8/119 (6%) Frame = -1 Query: 503 SNAFPAVCSLIHTAIGLSASSGTY--GSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTS 330 ++A P + + IG+ S G Y G +S T L I L P + Sbjct: 232 THATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAI--PFLARN 289 Query: 329 EMRTTAALDSWAPATYALIPP------KLSTTLPSPAAGLSVGGFAQHCGLAMSVARAG 171 + ++ W AT+A++PP ++++ P ++ +++G F + G A+ A G Sbjct: 290 KFGAAISMAVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAF--NLGNALGAAAGG 346
>INHA_TRIVU (O77755) Inhibin alpha chain precursor| Length = 361 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +1 Query: 127 PIPISSPGNHSRPSPPARATDMASPQCCANPPTLNP 234 P P+ SPG PS P + P C A P T+ P Sbjct: 297 PSPVLSPGAALTPSQPLPLGPGSRPCCAAMPSTMRP 332
>HIC2_HUMAN (Q96JB3) Hypermethylated in cancer 2 protein (Hic-2) (Hic-3)| (HIC1-related gene on chromosome 22) (Zinc finger and BTB domain-containing protein 30) Length = 615 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 127 PIPISSPGNHSRPSPPARATDM--ASPQCCANPPTLNPAA 240 P+P ++PG H P A+ +D SP + PP N A+ Sbjct: 255 PLPPATPGPHLTPDDAAQLSDSQHGSPPAASAPPVANSAS 294
>FUT1_PIG (Q29043) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) Length = 365 Score = 29.3 bits (64), Expect = 9.1 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Frame = -1 Query: 488 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 309 A+ L T + +AS P SGT T YPD RFG + + + A Sbjct: 53 AIFCLAGTPVHPNASDSCPKHPASLSGTWTIYPDG--------RFGNQMGQYATLLALAQ 104 Query: 308 LDS----WAPATYALIPPKLSTTLP 246 L+ PA +A++ P TLP Sbjct: 105 LNGRQAFIQPAMHAVLAPVFRITLP 129
>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog| Length = 319 Score = 29.3 bits (64), Expect = 9.1 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = +1 Query: 55 QSRVRCPSPPIYFVSLRRCRSVRFPIPISSPGNHSRPSPPARATDMASPQCCANPPT 225 Q+R PSPP + + + P P S R +PP+ T A+PQ NPP+ Sbjct: 60 QTRENPPSPPTSPAAPQPRENPPSP-PTSPAAPQPRENPPSPPTSPAAPQPRENPPS 115
>LIN1_NYCCO (P08548) LINE-1 reverse transcriptase homolog| Length = 1260 Score = 29.3 bits (64), Expect = 9.1 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -3 Query: 525 SDNRLCLFKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIW 409 S N+ C C +G LL HC+W + R W +++W Sbjct: 1124 SPNQRCWRGCGGKGTLL--HCWWECPLIRSFW---KDVW 1157
>EPN1_HUMAN (Q9Y6I3) Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding| mitotic phosphoprotein) Length = 551 Score = 29.3 bits (64), Expect = 9.1 Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 4/100 (4%) Frame = +1 Query: 127 PIPISSPGNHSRPSPPARATDMASPQCCANPPTLNPAAGEGKVVD----SFGGIKAYVAG 294 P P + G+ RP+ PA P T PAAGEG D S GG+ Sbjct: 286 PAPTPASGDPWRPAAPA------GPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPS 339 Query: 295 AQESKAAVVLISDVFGFGAPNLRKIADKVAASGYFVVVPD 414 A + SD +G G+P + + A+G F PD Sbjct: 340 ASDPWTPAPAFSDPWG-GSP-AKPSTNGTTAAGGFDTEPD 377
>APOA4_RAT (P02651) Apolipoprotein A-IV precursor (Apo-AIV) (ApoA-IV)| Length = 391 Score = 29.3 bits (64), Expect = 9.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 451 QRLQVHMDPHARNLAPQRNIQTQQLYR 371 Q+LQ H+ P+A +L Q N QTQ + R Sbjct: 129 QKLQEHLRPYATDLQAQINAQTQDMKR 155
>SALA_BACSU (P50863) Protein mrp homolog salA| Length = 352 Score = 29.3 bits (64), Expect = 9.1 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = +1 Query: 214 NPPT-LNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKIADKVAAS 390 NPP L A+G+G V S + ++ A+ K ++ +D++GF P++ I + Sbjct: 104 NPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVRPTIE 163 Query: 391 G 393 G Sbjct: 164 G 164
>SPHK2_MOUSE (Q9JIA7) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (SPK 2)| Length = 617 Score = 29.3 bits (64), Expect = 9.1 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = +3 Query: 12 GELLPYANXIRNEPPVTRPLSFSPHLFRVAAALSLGPLPNPNLIARQSLSPLPTSARDGH 191 G LP A P P + L R + L L PLP P L++ S PLP + +G Sbjct: 356 GHSLPRAKSELVLAPAPAPAATHSPLHRSVSDLPL-PLPQPALVSPGSPEPLPDLSLNGG 414 Query: 192 G 194 G Sbjct: 415 G 415
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 29.3 bits (64), Expect = 9.1 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +1 Query: 73 PSPPIYFVSLRRCRSVRFPIPISSPGNH---SRPSPPARATDMASPQCCANPPTL 228 PS P+ +L S P P ++PG H PSPP++ + P+ +P TL Sbjct: 439 PSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPK--RHPSTL 491
>ASSY_PHOPR (Q6LVG8) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 404 Score = 29.3 bits (64), Expect = 9.1 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Frame = +1 Query: 316 VVLISDVFGFGAPNLRKIADKVAASG----YFVVVPDFLHGDPYVPEDADRPIAVWIKEH 483 V ++DV G GA L I +K ASG Y + + + D P + + A++ ++ Sbjct: 33 VAFVADV-GQGAAELEGIEEKAIASGASSCYIADLKEEMVADYIYP--SLKTGAIYEGKY 89 Query: 484 TAGKAFEEAKPVIAALKEQGASSVGAAGYCWG 579 G + A+P+IA + + A +VGA C G Sbjct: 90 LLGTSM--ARPIIAKAQVECALAVGADAVCHG 119
>YP183_YEAST (Q08924) WD-repeat protein YPL183C| Length = 1013 Score = 29.3 bits (64), Expect = 9.1 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Frame = +1 Query: 271 GIKA--YVAGAQESKAAVVLISDVFGFGAPNLR---------KIADKVAASGYFVVVPDF 417 G+K+ YVA A + A ++ D G G NL+ K +D +AA+ + Sbjct: 884 GVKSLDYVANATRTSATILTGGDDNGLGLSNLKLDDSNKVTLKTSDFIAAAASSTITSGM 943 Query: 418 L--HGDPYVPEDADRPIAVWIKEHTAGK 495 L G + D+ I W E TAGK Sbjct: 944 LINGGKEVITTSVDQVIRAW--EITAGK 969
>K1196_HUMAN (Q96KM6) Zinc finger protein KIAA1196| Length = 892 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +1 Query: 127 PIPISSPGNHSRPSPPARATDMASPQCCANPPTLNPAAGEGKVV 258 P+P S PG SRP +R ++ P + P T+ G K + Sbjct: 167 PLPASKPGPISRPVTISRPVGVSKPIGVSKPVTIGKPVGVSKPI 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,750,537 Number of Sequences: 219361 Number of extensions: 2048638 Number of successful extensions: 8402 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 7658 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8365 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
