| Clone Name | bags8d07 |
|---|---|
| Clone Library Name | barley_pub |
>CHIF_DROME (Q9NK54) Protein chiffon| Length = 1711 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 7/91 (7%) Frame = +2 Query: 224 AQKGQLGYDVTTCELKVIEGQRD-----FVIQMNDKWNSFSLKKYDKFGLPFGCLKPNSG 388 ++KG L Y++ TC LK ++ R FV DK+ + K+YD + F + P Sbjct: 1215 SKKGLLEYEMETCALKALDQARQYCNPGFVAWQLDKYLELAGKEYD---IEFDQISPE-- 1269 Query: 389 RSYEELLLCIAEGENSEPEVV--PSTTPPNN 475 E E E +V P T PP + Sbjct: 1270 ----------VESEGREERLVNTPQTPPPTD 1290
>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent| alpha-latrotoxin receptor 3) (Lectomedin-3) Length = 1447 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +2 Query: 77 WXQPEGVKIHLYRLGIEQCEHDALKSFACAGQGSPSLL 190 W EGV++++ + + + EH K F G G P+L+ Sbjct: 944 WMFLEGVQLYIMLVEVFESEHSRRKYFYLVGYGMPALI 981
>LPHN3_BOVIN (O97827) Latrophilin-3 precursor| Length = 1580 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +2 Query: 77 WXQPEGVKIHLYRLGIEQCEHDALKSFACAGQGSPSLL 190 W EGV++++ + + + EH K F G G P+L+ Sbjct: 1025 WMFLEGVQLYIMLVEVFESEHSRRKYFYLVGYGMPALI 1062
>LPHN3_MOUSE (Q80TS3) Latrophilin-3 (Lectomedin-3) (Fragment)| Length = 1189 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +2 Query: 77 WXQPEGVKIHLYRLGIEQCEHDALKSFACAGQGSPSLL 190 W EGV++++ + + + EH K F G G P+L+ Sbjct: 677 WMFLEGVQLYIMLVEVFESEHSRRKYFYLVGYGMPALI 714
>SYA_MYCH2 (Q601M2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 883 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +2 Query: 188 LDTIILSQWENFAQKGQLGYDVTTCELKVIEGQ 286 + IIL++ ENFA+ ++GY++ +LK+ + Q Sbjct: 352 ISKIILNEEENFAKTLEIGYNLLESQLKINKNQ 384
>SYA_MYCHJ (Q4AAD3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 880 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +2 Query: 188 LDTIILSQWENFAQKGQLGYDVTTCELKVIEGQ 286 + IIL++ ENFA+ ++GY++ +LK+ + Q Sbjct: 349 ISKIILNEEENFAKTLEIGYNLLESQLKINKNQ 381
>SYA_MYCH7 (Q4A8G4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 880 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +2 Query: 188 LDTIILSQWENFAQKGQLGYDVTTCELKVIEGQ 286 + IIL++ ENFA+ ++GY++ +LK+ + Q Sbjct: 349 ISKIILNEEENFAKTLEIGYNLLESQLKINKNQ 381 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,062,250 Number of Sequences: 219361 Number of extensions: 1714508 Number of successful extensions: 3922 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3833 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3922 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)