Clone Information

BLAST Search Result

Clone Name	bags8c19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	R10AA_ARATH (Q8VZB9) 60S ribosomal protein L10a-1	198	2e-52
2	R10AB_ARATH (P59230) 60S ribosomal protein L10a-2	197	5e-52
3	R10AC_ARATH (P59231) 60S ribosomal protein L10a-3	193	2e-49
4	R10AB_DROME (Q9VTP4) 60S ribosomal protein L10a-2	165	5e-41
5	RL10A_SPOFR (Q963B6) 60S ribosomal protein L10a	159	5e-39
6	RL10A_XENLA (Q7ZYS8) 60S ribosomal protein L10a	152	3e-37
7	RL10A_RAT (P62907) 60S ribosomal protein L10a	151	1e-36
8	RL10A_HUMAN (P62906) 60S ribosomal protein L10a (CSA-19)	151	1e-36
9	RL10A_BOVIN (Q5E9E6) 60S ribosomal protein L10a	151	1e-36
10	RL10A_BRARE (Q6PC69) 60S ribosomal protein L10a	149	3e-36
11	RL10A_MOUSE (P53026) 60S ribosomal protein L10a (CSA-19) (Protei...	149	4e-36
12	RL10A_ICTPU (Q90YV8) 60S ribosomal protein L10a	149	5e-36
13	RL10A_MACFA (Q4R5P3) 60S ribosomal protein L10a	148	6e-36
14	RL10A_NEUCR (Q7RZS0) 60S ribosomal protein L10a	147	1e-35
15	RL10A_CAEEL (Q9N4I4) 60S ribosomal protein L10a	146	3e-35
16	RL1B_SCHPO (O74836) 60S ribosomal protein L1-B (L10a)	145	5e-35
17	RL10A_PIG (P53027) 60S ribosomal protein L10a (Fragment)	145	7e-35
18	RL1A_SCHPO (O14363) 60S ribosomal protein L1-A (L10a)	144	9e-35
19	RL1_YEAST (P53030) 60S ribosomal protein L1 (L10a)	140	1e-33
20	RL10A_ASHGO (Q755D9) 60S ribosomal protein L10a	139	5e-33
21	RL10A_CANGA (Q6FRF5) 60S ribosomal protein L10a	138	9e-33
22	RL10A_CANAL (Q9UVJ4) 60S ribosomal protein L10a	135	4e-32
23	RL10A_CHLRE (Q9SW75) 60S ribosomal protein L10a	134	2e-31
24	RL10A_TRYBR (P53028) 60S ribosomal protein L10a	122	5e-28
25	RL10A_CAERE (Q9NBJ7) 60S ribosomal protein L10a (Fragment)	117	2e-26
26	RL10A_ENTHI (O15613) 60S ribosomal protein L10a (Fragment)	105	6e-23
27	RL1_PYRKO (Q5JH35) 50S ribosomal protein L1P	50	3e-06
28	RL1_PYRAB (Q9UWR8) 50S ribosomal protein L1P	46	5e-05
29	RL1_PYRHO (O57782) 50S ribosomal protein L1P	45	1e-04
30	RL1_PYRFU (Q8TZJ9) 50S ribosomal protein L1P	44	2e-04
31	RL1_METJA (P54050) 50S ribosomal protein L1P	42	0.001
32	RL1_METKA (Q8TX51) 50S ribosomal protein L1P	37	0.021
33	RL1_METTL (O52704) 50S ribosomal protein L1P	37	0.027
34	RL1_AERPE (Q9Y9W6) 50S ribosomal protein L1P	37	0.036
35	RL1_METTH (O27716) 50S ribosomal protein L1P	35	0.080
36	RL1_NATPD (Q3INI6) 50S ribosomal protein L1P	35	0.14
37	RL1_METVA (P15824) 50S ribosomal protein L1P (Ribosomal protein ...	34	0.23
38	RL1_ARCFU (O28782) 50S ribosomal protein L1P	30	0.50
39	RL1_THETH (P27150) 50S ribosomal protein L1	33	0.52
40	RL1_THET8 (Q5SLP7) 50S ribosomal protein L1	33	0.52
41	RL1_THET2 (Q72GV9) 50S ribosomal protein L1	33	0.52
42	RL1_PYRAE (Q8ZTT4) 50S ribosomal protein L1P	33	0.52
43	RL1_METMP (Q6M0L0) 50S ribosomal protein L1P	32	0.67
44	RL1_SULAC (P35024) 50S ribosomal protein L1P	32	0.88
45	RL1_AQUAE (O67759) 50S ribosomal protein L1	32	0.88
46	RL1_HALMA (P12738) 50S ribosomal protein L1P (Hmal1) (HL8)	31	1.5
47	RL1_BACSK (Q5WLS4) 50S ribosomal protein L1	31	1.5
48	TINAL_HUMAN (Q9GZM7) Tubulointerstitial nephritis antigen-like p...	31	1.5
49	RL1_ONYPE (Q6YQW6) 50S ribosomal protein L1	31	2.0
50	RL1_GEOKA (Q5L420) 50S ribosomal protein L1	31	2.0
51	RL1_BACST (P04447) 50S ribosomal protein L1	31	2.0
52	RL1_THEFY (Q47LI2) 50S ribosomal protein L1	31	2.0
53	RL1_STAES (Q8CTT4) 50S ribosomal protein L1	30	2.6
54	RL1_STAEQ (Q5HRL4) 50S ribosomal protein L1	30	2.6
55	VIT2_CAEEL (P05690) Vitellogenin 2 precursor	30	3.3
56	Y016_MYCPN (P75097) Hypothetical protein MG012 homolog (D12_orf288)	30	3.3
57	RL1_LACSS (Q38V06) 50S ribosomal protein L1	30	3.3
58	RL1_OCEIH (Q8ETZ2) 50S ribosomal protein L1	30	4.4
59	FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)	30	4.4
60	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	30	4.4
61	FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)	29	5.7
62	PIGO_MOUSE (Q9JJI6) Phosphatidylinositol-glycan biosynthesis, cl...	29	7.5
63	YKD3_YEAST (P36097) Hypothetical 118.9 kDa protein in PTM1-IXR1 ...	29	7.5
64	MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI)	29	7.5
65	VPS41_ARATH (P93043) Vacuolar assembly protein VPS41 homolog	29	7.5
66	RL1_THETN (Q8R7U3) 50S ribosomal protein L1	29	7.5
67	RL1_BACLD (Q65PB9) 50S ribosomal protein L1	29	7.5
68	RL1_BACHD (Q9KGE5) 50S ribosomal protein L1	29	7.5
69	RL1_LISMO (Q8YAA4) 50S ribosomal protein L1	29	7.5
70	RL1_LISMF (Q724G3) 50S ribosomal protein L1	29	7.5
71	RL1_LISIN (Q92F26) 50S ribosomal protein L1	29	7.5
72	RL1_SULTO (Q971J1) 50S ribosomal protein L1P	29	7.5
73	INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)	29	7.5
74	RL1_CARHZ (Q3A9Q3) 50S ribosomal protein L1	28	9.7

>R10AA_ARATH (Q8VZB9) 60S ribosomal protein L10a-1|
          Length = 216

 Score =  198 bits (503), Expect(2) = 2e-52
 Identities = 97/123 (78%), Positives = 105/123 (85%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQKDKRFSGSVKLPHIPRPKM++CMLGDAQHV++AEKMGL+ MDVES      
Sbjct: 35  IGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKMGLENMDVESLKKLNK 94

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      YHAFLASE++IKQIPRLLGPGLNKAGKFPTLVSHQESLE+KVNETKATV
Sbjct: 95  NKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATV 154

Query: 476 KFQ 484
           KFQ
Sbjct: 155 KFQ 157



 Score = 32.7 bits (73), Expect = 0.52
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +1

Query: 58  LLGRPEXKKRKFTETVELQXWSQELRPTKG*TFQWLCEAAPYPPPK 195
           + G+ E KKR F ET+ELQ   +   P K   F    +    P PK
Sbjct: 16  ITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61



 Score = 26.9 bits (58), Expect(2) = 2e-52
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 15 SKLQSDAVKXAITQXVGEARXKE 83
          SKLQS+AV+ AIT   G++  K+
Sbjct: 2  SKLQSEAVREAITTITGKSEAKK 24

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>R10AB_ARATH (P59230) 60S ribosomal protein L10a-2|
          Length = 216

 Score =  197 bits (502), Expect(2) = 5e-52
 Identities = 97/123 (78%), Positives = 104/123 (84%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQKDKRFSGSVKLPHIPRPKM++CMLGDAQHV++AEKMGL  MDVE+      
Sbjct: 35  IGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNK 94

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      YHAFLASE++IKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV
Sbjct: 95  NKKLVKKLAKSYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 154

Query: 476 KFQ 484
           KFQ
Sbjct: 155 KFQ 157



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +1

Query: 64  GRPEXKKRKFTETVELQXWSQELRPTKG*TFQWLCEAAPYPPPK 195
           G+ E KKR F ETVELQ   +   P K   F    +    P PK
Sbjct: 18  GKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61



 Score = 25.8 bits (55), Expect(2) = 5e-52
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 15 SKLQSDAVKXAITQXVGEARXKE 83
          SKLQS+AV+ AIT   G++  K+
Sbjct: 2  SKLQSEAVREAITTIKGKSEEKK 24

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>R10AC_ARATH (P59231) 60S ribosomal protein L10a-3|
          Length = 217

 Score =  193 bits (491), Expect = 2e-49
 Identities = 93/123 (75%), Positives = 105/123 (85%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQKDKRFSGSVKLPH+PRPKM++CMLGDAQHV++AEK+GL+ MDVE+      
Sbjct: 36  IGLKNYDPQKDKRFSGSVKLPHVPRPKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNK 95

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      +HAFLASE++IKQIPRLLGPGLNKAGKFPTLVSHQESLE+KVNETKATV
Sbjct: 96  NKKLVKKLAKKFHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATV 155

Query: 476 KFQ 484
           KFQ
Sbjct: 156 KFQ 158



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 73  EXKKRKFTETVELQXWSQELRPTKG*TFQWLCEAAPYPPPK 195
           E K R FTET+ELQ   +   P K   F    +    P PK
Sbjct: 22  ETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRPK 62

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>R10AB_DROME (Q9VTP4) 60S ribosomal protein L10a-2|
          Length = 217

 Score =  165 bits (418), Expect = 5e-41
 Identities = 80/136 (58%), Positives = 96/136 (70%)
 Frame = +2

Query: 77  KRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGL 256
           K+    L      IGLKNYDPQKDKRFSG+VKL HIPRPKM+VC+LGD QH D+A+   +
Sbjct: 23  KKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVCILGDQQHCDEAKANNV 82

Query: 257 DYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQE 436
           D+MD E+                 Y AFLASE++IKQIPRLLGPGLNKAGKFP L+SHQE
Sbjct: 83  DFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKAGKFPALLSHQE 142

Query: 437 SLEAKVNETKATVKFQ 484
           S+  K+ E K+T+KFQ
Sbjct: 143 SMIGKIEEVKSTIKFQ 158

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>RL10A_SPOFR (Q963B6) 60S ribosomal protein L10a|
          Length = 217

 Score =  159 bits (401), Expect = 5e-39
 Identities = 77/123 (62%), Positives = 93/123 (75%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQKDKRFSG+VKL +IPRPKM+VC+LGD QH D+A+ + +  MD E+      
Sbjct: 36  IGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKSLTVPCMDAEALKKLNK 95

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y AFLASE++IKQIPRLLGPGLNKAGKFP L+SHQES+  K++E KAT+
Sbjct: 96  NKKLVKKLAKKYDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKATI 155

Query: 476 KFQ 484
           KFQ
Sbjct: 156 KFQ 158

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>RL10A_XENLA (Q7ZYS8) 60S ribosomal protein L10a|
          Length = 217

 Score =  152 bits (385), Expect = 3e-37
 Identities = 74/139 (53%), Positives = 95/139 (68%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  K+    L      I LKNYDPQKDKRFSG+V+L   PRPK  +C+LGD QH D+A+ 
Sbjct: 20  GSKKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSLCVLGDQQHCDEAKA 79

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
           + L +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 80  VDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 139

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E+L AKV+E K+T+KFQ
Sbjct: 140 HNENLVAKVDEVKSTIKFQ 158

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>RL10A_RAT (P62907) 60S ribosomal protein L10a|
          Length = 216

 Score =  151 bits (381), Expect = 1e-36
 Identities = 72/139 (51%), Positives = 95/139 (68%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  ++    L      I LKNYDPQKDKRFSG+V+L   PRPK  VC+LGD QH D+A+ 
Sbjct: 19  GNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
           + + +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 79  VDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E++ AKV+E K+T+KFQ
Sbjct: 139 HNENMVAKVDEVKSTIKFQ 157

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>RL10A_HUMAN (P62906) 60S ribosomal protein L10a (CSA-19)|
          Length = 216

 Score =  151 bits (381), Expect = 1e-36
 Identities = 72/139 (51%), Positives = 95/139 (68%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  ++    L      I LKNYDPQKDKRFSG+V+L   PRPK  VC+LGD QH D+A+ 
Sbjct: 19  GNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
           + + +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 79  VDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E++ AKV+E K+T+KFQ
Sbjct: 139 HNENMVAKVDEVKSTIKFQ 157

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>RL10A_BOVIN (Q5E9E6) 60S ribosomal protein L10a|
          Length = 216

 Score =  151 bits (381), Expect = 1e-36
 Identities = 72/139 (51%), Positives = 95/139 (68%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  ++    L      I LKNYDPQKDKRFSG+V+L   PRPK  VC+LGD QH D+A+ 
Sbjct: 19  GNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
           + + +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 79  VDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E++ AKV+E K+T+KFQ
Sbjct: 139 HNENMVAKVDEVKSTIKFQ 157

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>RL10A_BRARE (Q6PC69) 60S ribosomal protein L10a|
          Length = 216

 Score =  149 bits (377), Expect = 3e-36
 Identities = 73/139 (52%), Positives = 93/139 (66%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  ++    L      I LKNYDPQKDKRFSG+V+L   PRPK  VC+LGD QH D+A+ 
Sbjct: 19  GSRRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
             L +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 79  AELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E+L  KV+E K+T+KFQ
Sbjct: 139 HNENLGTKVDEVKSTIKFQ 157

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>RL10A_MOUSE (P53026) 60S ribosomal protein L10a (CSA-19) (Protein NEDD6)|
           (Neural precursor cell expressed developmentally
           down-regulated protein 6)
          Length = 216

 Score =  149 bits (376), Expect = 4e-36
 Identities = 71/139 (51%), Positives = 94/139 (67%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  ++    L      I LKNYDPQKDKRFSG+V+L   PRPK  VC+LGD QH D+ + 
Sbjct: 19  GNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDERKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
           + + +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 79  VDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E++ AKV+E K+T+KFQ
Sbjct: 139 HNENMVAKVDEVKSTIKFQ 157

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>RL10A_ICTPU (Q90YV8) 60S ribosomal protein L10a|
          Length = 216

 Score =  149 bits (375), Expect = 5e-36
 Identities = 72/139 (51%), Positives = 92/139 (66%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G   +    L      I LKNYDPQKDKRFSG+V+L   PRPK  VC+LGD QH D+A+ 
Sbjct: 19  GSISKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
             + +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 79  AEIPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E+L  KV+E K+T+KFQ
Sbjct: 139 HNENLNTKVDEVKSTIKFQ 157

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>RL10A_MACFA (Q4R5P3) 60S ribosomal protein L10a|
          Length = 216

 Score =  148 bits (374), Expect = 6e-36
 Identities = 71/139 (51%), Positives = 94/139 (67%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  ++    L      I LKNYDPQKDKRFSG+V+L   PRPK  VC+LGD QH D+A+ 
Sbjct: 19  GNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
           + + +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+ ++
Sbjct: 79  VDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSPLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H E++ AKV+E K+T+KFQ
Sbjct: 139 HNENMVAKVDEVKSTIKFQ 157

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>RL10A_NEUCR (Q7RZS0) 60S ribosomal protein L10a|
          Length = 217

 Score =  147 bits (372), Expect = 1e-35
 Identities = 70/123 (56%), Positives = 88/123 (71%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQ+DKRFSG+++LP IPRP M +C+LGD   +D+A+  G+D M V+       
Sbjct: 36  IGLKNYDPQRDKRFSGTIRLPSIPRPNMSICILGDQHDIDRAKHGGVDAMSVDDLKKLNK 95

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y AF+ASEA+IKQIPRLLGPGL+KAGKFPT VSH + L  K+NE K+T+
Sbjct: 96  NKKLIKKLARKYDAFVASEALIKQIPRLLGPGLSKAGKFPTPVSHSDDLTGKLNEVKSTI 155

Query: 476 KFQ 484
           KFQ
Sbjct: 156 KFQ 158

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>RL10A_CAEEL (Q9N4I4) 60S ribosomal protein L10a|
          Length = 216

 Score =  146 bits (368), Expect = 3e-35
 Identities = 69/123 (56%), Positives = 88/123 (71%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQKDKRFSGS++L HIPRP M+VC+ GD  H+D+A    +  M  +       
Sbjct: 35  IGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNK 94

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y AF+ASE++IKQIPR+LGPGLNKAGKFP++V+H ESL++K +E +ATV
Sbjct: 95  QKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATV 154

Query: 476 KFQ 484
           KFQ
Sbjct: 155 KFQ 157

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>RL1B_SCHPO (O74836) 60S ribosomal protein L1-B (L10a)|
          Length = 216

 Score =  145 bits (366), Expect = 5e-35
 Identities = 68/123 (55%), Positives = 88/123 (71%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQ+DKRFSG++KLP++PRP M +C+LGDA  +D+A+  G+D M V+       
Sbjct: 35  IGLKNYDPQRDKRFSGTIKLPNVPRPNMAICILGDAHDLDRAKHGGVDAMSVDDLKKLNK 94

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ VSH + L  K+ E K+T+
Sbjct: 95  NKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHADDLYGKITEVKSTI 154

Query: 476 KFQ 484
           KFQ
Sbjct: 155 KFQ 157



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 58  LLGRPEXKKRKFTETVELQXWSQELRPTKG*TFQWLCEAAPYPPP 192
           +L   E KKR FTETVELQ   +   P +   F    +    P P
Sbjct: 16  ILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRP 60

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>RL10A_PIG (P53027) 60S ribosomal protein L10a (Fragment)|
          Length = 164

 Score =  145 bits (365), Expect = 7e-35
 Identities = 71/139 (51%), Positives = 90/139 (64%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEK 247
           G  +     L      I LKNYDPQKDKRFSG+V+L   PRPK  VC LGD QH D+A+ 
Sbjct: 19  GNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCXLGDQQHCDEAKA 78

Query: 248 MGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS 427
           + + +MD+E+                 Y AFLASE++IKQIPR+LGPGLNKAGKFP+L++
Sbjct: 79  VDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLT 138

Query: 428 HQESLEAKVNETKATVKFQ 484
           H   + AKV+E K+ VKFQ
Sbjct: 139 HNXDMVAKVDEVKSRVKFQ 157

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>RL1A_SCHPO (O14363) 60S ribosomal protein L1-A (L10a)|
          Length = 216

 Score =  144 bits (364), Expect = 9e-35
 Identities = 68/123 (55%), Positives = 88/123 (71%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQ+DKRFSG++KLP++PRP M +C+LGDA  +D+A+  G+D M V+       
Sbjct: 35  IGLKNYDPQRDKRFSGTIKLPNVPRPNMSICILGDAHDLDRAKHGGVDAMSVDDLKKLNK 94

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ VSH + L  K+ E K+T+
Sbjct: 95  NKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTI 154

Query: 476 KFQ 484
           KFQ
Sbjct: 155 KFQ 157



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +1

Query: 40  RXPSPXLLGRPEXKKRKFTETVELQXWSQELRPTKG*TFQWLCEAAPYPPP 192
           R     +L   E KKR FTETVELQ   +   P +   F    +    P P
Sbjct: 10  RSSVETILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRP 60

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>RL1_YEAST (P53030) 60S ribosomal protein L1 (L10a)|
          Length = 217

 Score =  140 bits (354), Expect = 1e-33
 Identities = 66/123 (53%), Positives = 86/123 (69%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           +GLKNYDPQ+DKRFSGS+KLP+ PRP M +C+ GDA  VD+A+  G+D M V+       
Sbjct: 36  VGLKNYDPQRDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNK 95

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT VSH + L  KV + ++T+
Sbjct: 96  NKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTI 155

Query: 476 KFQ 484
           KFQ
Sbjct: 156 KFQ 158

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>RL10A_ASHGO (Q755D9) 60S ribosomal protein L10a|
          Length = 217

 Score =  139 bits (349), Expect = 5e-33
 Identities = 66/123 (53%), Positives = 86/123 (69%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           +GLKNYDPQ+DKRFSG++KLP  PRP M VC+ GDA  VD+A+  G+D M V+       
Sbjct: 36  VGLKNYDPQRDKRFSGTLKLPVCPRPNMSVCIFGDAFDVDRAKSCGVDAMSVDDLKKLNK 95

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT VSH + L +KV + ++T+
Sbjct: 96  NKKLIKKLAKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYSKVTDVRSTI 155

Query: 476 KFQ 484
           KFQ
Sbjct: 156 KFQ 158

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>RL10A_CANGA (Q6FRF5) 60S ribosomal protein L10a|
          Length = 217

 Score =  138 bits (347), Expect = 9e-33
 Identities = 65/123 (52%), Positives = 85/123 (69%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           +GLKNYDPQ+DKRFSG++KLP  PRP M +C+ GDA  VD+A+  G+D M V+       
Sbjct: 36  VGLKNYDPQRDKRFSGTLKLPVCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNK 95

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT VSH + L  KV + ++T+
Sbjct: 96  NKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTI 155

Query: 476 KFQ 484
           KFQ
Sbjct: 156 KFQ 158

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>RL10A_CANAL (Q9UVJ4) 60S ribosomal protein L10a|
          Length = 217

 Score =  135 bits (341), Expect = 4e-32
 Identities = 64/123 (52%), Positives = 85/123 (69%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           +GLKNYDPQ+DKRFSG++KLP +PRP M  C+ GDA   D+A+ +G+D M V+       
Sbjct: 36  VGLKNYDPQRDKRFSGTLKLPQVPRPNMTTCIFGDAFDFDRAKSLGVDAMSVDDLKKLNK 95

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y+AF+ASE +IKQIPRLLG  L+KAG+FPT VSH + L +KV + K+T+
Sbjct: 96  NKKLIKKLAKKYNAFIASEVLIKQIPRLLGRTLSKAGQFPTPVSHNDDLYSKVTDVKSTI 155

Query: 476 KFQ 484
           KFQ
Sbjct: 156 KFQ 158

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>RL10A_CHLRE (Q9SW75) 60S ribosomal protein L10a|
          Length = 213

 Score =  134 bits (336), Expect = 2e-31
 Identities = 69/123 (56%), Positives = 86/123 (69%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           IGLKNYDPQKDKRFSGSV+LP +PRP+MRV   GD +H +QA  +G+D   VE       
Sbjct: 35  IGLKNYDPQKDKRFSGSVRLPFVPRPRMRV-RAGDVKHCEQAGAIGVDAKGVEDLKKLNK 93

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      YHAFLAS+++IKQIPRLLGPGLNKAGKFP  ++  ++LE  V +TK ++
Sbjct: 94  NKKLVKKLAQAYHAFLASDSVIKQIPRLLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSI 151

Query: 476 KFQ 484
           KFQ
Sbjct: 152 KFQ 154

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>RL10A_TRYBR (P53028) 60S ribosomal protein L10a|
          Length = 214

 Score =  122 bits (306), Expect = 5e-28
 Identities = 62/123 (50%), Positives = 80/123 (65%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           + LKNYDPQKDKRFSGSV+LPH+ RP+M VC+L D  H D A+K  +  M+ E       
Sbjct: 33  VNLKNYDPQKDKRFSGSVRLPHVCRPRMTVCLLCDLVHEDIAKKNDVPTMNQEELKKLNK 92

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y AFL SE+IIK +PRL+GP +++ GKFPT+ +  ESL  KV E ++TV
Sbjct: 93  NKKLVKKMCNQYDAFLCSESIIKTVPRLVGPHMHRVGKFPTVCAQNESLPDKVLELQSTV 152

Query: 476 KFQ 484
           KFQ
Sbjct: 153 KFQ 155

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>RL10A_CAERE (Q9NBJ7) 60S ribosomal protein L10a (Fragment)|
          Length = 112

 Score =  117 bits (292), Expect = 2e-26
 Identities = 55/109 (50%), Positives = 74/109 (67%)
 Frame = +2

Query: 158 SGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXXXXXXXXXXXXXYHA 337
           SGS++L HIPRP M+VC+ GD  H+D+A    +  M  +                  Y A
Sbjct: 1   SGSIRLKHIPRPSMKVCVFGDQHHLDEAAAGNIPAMSADDLKKLNKQKKLIKKLAKSYDA 60

Query: 338 FLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQ 484
           F+ASE++IKQIPR+LGPGLNKAGKFP++V+H ESL++K +E +ATVKFQ
Sbjct: 61  FIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQ 109

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>RL10A_ENTHI (O15613) 60S ribosomal protein L10a (Fragment)|
          Length = 165

 Score =  105 bits (262), Expect = 6e-23
 Identities = 49/123 (39%), Positives = 74/123 (60%)
 Frame = +2

Query: 116 IGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXX 295
           + LKNYDP KDKR  G+ KLP++ +   +VC+LGDAQ  + A+K  + +MDV++      
Sbjct: 29  LALKNYDPDKDKRCGGTDKLPNVTKANYKVCVLGDAQACEAAQKENIPHMDVDALKALYK 88

Query: 296 XXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                      Y+ FL S+++ +Q+ ++LGPGLNK GKFP  +   E L+ K+NE +  V
Sbjct: 89  DKMFFKKLARKYNTFLGSDSVGRQLQKILGPGLNKGGKFPPPLGKNEDLKVKINELQCQV 148

Query: 476 KFQ 484
             Q
Sbjct: 149 NSQ 151

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>RL1_PYRKO (Q5JH35) 50S ribosomal protein L1P|
          Length = 216

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           + LK+ D +K + RF   V LPH    + ++ ++ D    + A+K+GLD +  E      
Sbjct: 32  VNLKDVDLRKPENRFKLEVVLPHGRGKEPKIAVIADGAVAEAAKKLGLDVISGEELEELA 91

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLV-SHQESLEAKVNETKA 469
                       Y  F+A+  ++ +I R LG  L    K P +V     +LE  V + K 
Sbjct: 92  KSPRQARKLAKKYDFFIAAAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNLEPIVEKLKK 151

Query: 470 TVKFQ 484
           TV+ Q
Sbjct: 152 TVRIQ 156

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>RL1_PYRAB (Q9UWR8) 50S ribosomal protein L1P|
          Length = 219

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           + LK+ D ++ + RF   V LPH     +++ ++ D    + A ++GLD +         
Sbjct: 35  VNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIA 94

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLV-SHQESLEAKVNETKA 469
                       Y  F+A   ++ +I R LG  L    K P +V     +LE  V + K 
Sbjct: 95  QSPRQARKLAKKYDFFIAEAPLMPKIGRYLGKYLGPRNKMPVVVPPTMSNLEPIVEKLKK 154

Query: 470 TVKFQ 484
           TV+ Q
Sbjct: 155 TVRIQ 159

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>RL1_PYRHO (O57782) 50S ribosomal protein L1P|
          Length = 219

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           + LK+ D ++ + RF   V LPH     +++ ++ D    + A ++GLD +         
Sbjct: 35  VNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIA 94

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLV-SHQESLEAKVNETKA 469
                       Y  F+A   ++ +I R LG  L    K P +V     ++E  V + K 
Sbjct: 95  KSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNIEPIVEKLKK 154

Query: 470 TVKFQ 484
           TV+ Q
Sbjct: 155 TVRIQ 159

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>RL1_PYRFU (Q8TZJ9) 50S ribosomal protein L1P|
          Length = 216

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           + LK+ D ++ + RF   V LPH     +++ ++ D    + A K+GLD +         
Sbjct: 32  VNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARKLGLDVISSAELEEIA 91

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQ-ESLEAKVNETKA 469
                       Y  F+A   ++ +I R LG  L    K P +V      L   V + K 
Sbjct: 92  SSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTLTDLTPIVEKLKK 151

Query: 470 TVKFQ 484
           TV+ Q
Sbjct: 152 TVRIQ 156

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>RL1_METJA (P54050) 50S ribosomal protein L1P|
          Length = 219

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
 Frame = +2

Query: 104 WSFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESX 280
           + F   LK  D +K + R    V LPH    + ++ ++G      QAE++GL  +  E  
Sbjct: 26  FEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAVIGTGDLAKQAEELGLTVIRKEEI 85

Query: 281 XXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNE 460
                           +  F+A   ++  I R +G  L   GK P  V    +++  V  
Sbjct: 86  EELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILGPRGKMPKPVPANANIKPLVER 145

Query: 461 TKATV 475
            K TV
Sbjct: 146 LKKTV 150

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>RL1_METKA (Q8TX51) 50S ribosomal protein L1P|
          Length = 214

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 26/120 (21%), Positives = 45/120 (37%)
 Frame = +2

Query: 119 GLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXXX 298
           G+   DP +  R    V LPH     + VC++ + +   +AE+ G   ++ E        
Sbjct: 36  GVDLSDPSQ--RIDKEVVLPHGRGKPVNVCVIAEGEMAREAEEAGATVINREKLEELAEN 93

Query: 299 XXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVK 478
                     +  F A   ++  + R+LGP L   GK    V     + A +     T +
Sbjct: 94  VREAKKIARRHEFFYAQVDLMPDVGRVLGPVLGPRGKMAKPVPPNADIRALIERAHRTAR 153

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>RL1_METTL (O52704) 50S ribosomal protein L1P|
          Length = 213

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 1/121 (0%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           I LK  D  + + R    V LP+    + ++ ++       QAE+MGL  +  +      
Sbjct: 30  INLKELDLSRPENRLKEQVVLPNGRGKEPKIAVIAKGDLAAQAEEMGLTVIRQDELEELG 89

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKAT 472
                       +  F+A   ++  + + LGP L   GK P  V    +L   V   K T
Sbjct: 90  KNKKMAKKIANEHDFFIAQADMMPLVGKTLGPVLGPRGKMPQPVPANANLTPLVERLKKT 149

Query: 473 V 475
           V
Sbjct: 150 V 150

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>RL1_AERPE (Q9Y9W6) 50S ribosomal protein L1P|
          Length = 212

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQKDK-RFSGSVKLPHIPRPKMRVCMLGDAQHVDQAE 244
           G+ KR   S+ +    + LK+ D +  + R   +V LP+ P  + +VC++       QA+
Sbjct: 16  GRGKRFKQSVEI---IVALKDIDLKSPQARIRETVFLPNRPPKEAKVCVVAHGDMELQAK 72

Query: 245 KMGLDYMDVESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLV 424
           + G++ ++ +                   +  L    ++    R+LGP L   GK P  V
Sbjct: 73  EAGVEVLNRQDLQNLSQNKREVKKLARRCYWVLVRADLMGLAGRILGPALGPRGKAPVPV 132

Query: 425 SHQESLEAKVNETKATV 475
               +++  +   KA V
Sbjct: 133 PPNANIKDLIERYKAAV 149

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>RL1_METTH (O27716) 50S ribosomal protein L1P|
          Length = 224

 Score = 35.4 bits (80), Expect = 0.080
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDV-ESXXXX 289
           + +K+ D  K + RF   V LP+     +++ ++ D +   QA+  G D +   +     
Sbjct: 41  LNIKDLDVNKPENRFDEEVSLPNGRGKDVKIAVIADGELALQAKNAGADLVITKDELEEL 100

Query: 290 XXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKA 469
                        Y  F+A   ++  + R +GP L    K P  V    + E  +N+ + 
Sbjct: 101 GKNRKEAKKLANQYEFFVAQADMMPLVGRFMGPVLGPRKKMPKPVPATINPEPILNKLRD 160

Query: 470 TVK 478
           TVK
Sbjct: 161 TVK 163

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>RL1_NATPD (Q3INI6) 50S ribosomal protein L1P|
          Length = 212

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 1/122 (0%)
 Frame = +2

Query: 116 IGLKNYD-PQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           I L++ D    + R   S+ LP        + +  + +   +AE +  D +D +      
Sbjct: 29  INLRDLDLADPNNRVDESIVLPSGTGQDTHIVVFAEGETALRAEDVADDVLDSDDLEDLG 88

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKAT 472
                          F+A   +++ I R LG  L   GK PT +   + +   VN  K T
Sbjct: 89  DDDNAAKDLADETDFFIAEADLMQDIGRYLGTVLGPRGKMPTPLQPDDDVVETVNRMKNT 148

Query: 473 VK 478
           V+
Sbjct: 149 VQ 150

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>RL1_METVA (P15824) 50S ribosomal protein L1P (Ribosomal protein ML6)|
          Length = 213

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
 Frame = +2

Query: 116 IGLKNYD-PQKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           + LK  D  + + R    + LP       ++ ++       QA +MGL  +  E      
Sbjct: 30  VNLKELDLTRHENRLKEQIVLPSGKGKDTKIAVIAKGDLAAQAAEMGLTVIRQEELEELG 89

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKAT 472
                       +  F+A   ++  + + LGP L   GK PT +    +L   V   K T
Sbjct: 90  KNKKAAKRIANEHGFFIAQADMMPLVGKSLGPVLGPRGKMPTPLPGNANLAPLVARFKKT 149

Query: 473 V 475
           V
Sbjct: 150 V 150

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>RL1_ARCFU (O28782) 50S ribosomal protein L1P|
          Length = 215

 Score = 30.0 bits (66), Expect(2) = 0.50
 Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 2/125 (1%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDV-ESXXXX 289
           + L+N D +K + R    V LPH      ++ +        +A++ G D +   E     
Sbjct: 32  VNLRNVDMKKPENRIDTVVNLPHGLGKPRKIGVFAKGDTALKAKEAGADVVITPEEIDEL 91

Query: 290 XXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKA 469
                           F+A   ++ +I R LGP L   GK P  +      +  ++  + 
Sbjct: 92  AKDKRRAKKLANSIDFFIAEAPLMPEIGRKLGPVLGPRGKIPQPIPPLADPKPFIDRLRN 151

Query: 470 TVKFQ 484
           +VK +
Sbjct: 152 SVKIR 156



 Score = 21.6 bits (44), Expect(2) = 0.50
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 79  KKRKFTETVEL 111
           KKR+F ETVE+
Sbjct: 20  KKRRFVETVEM 30

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>RL1_THETH (P27150) 50S ribosomal protein L1|
          Length = 228

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVE 274
           DP++ D+   G+V LPH    ++RV  +   + + +AE+ G DY+  E
Sbjct: 50  DPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGE 97

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>RL1_THET8 (Q5SLP7) 50S ribosomal protein L1|
          Length = 228

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVE 274
           DP++ D+   G+V LPH    ++RV  +   + + +AE+ G DY+  E
Sbjct: 50  DPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGE 97

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>RL1_THET2 (Q72GV9) 50S ribosomal protein L1|
          Length = 228

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVE 274
           DP++ D+   G+V LPH    ++RV  +   + + +AE+ G DY+  E
Sbjct: 50  DPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGE 97

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>RL1_PYRAE (Q8ZTT4) 50S ribosomal protein L1P|
          Length = 222

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
 Frame = +2

Query: 68  GQXKRNASSLRLWSFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAE 244
           G+ +R   S+ L    + LK  D  K + R +  V+LPH P+P         A  V  A+
Sbjct: 21  GKPRRFKQSVEL---IVVLKGVDLSKPENRINLLVELPHPPKPNKIAAFAHGAFEVS-AK 76

Query: 245 KMGLDYMDV-ESXXXXXXXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTL 421
             G+D +   +                  Y  F+A   ++  + R++GP     GK P +
Sbjct: 77  NAGVDSIITRDQVEGLSGNKRAIRKLAKQYDFFIAPPDLMPLLGRVVGPIFGPRGKMPEV 136

Query: 422 VSHQESLEAKVNETKATVK 478
           V     +++ V   +  V+
Sbjct: 137 VPPNVDVKSVVERLRKAVR 155

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>RL1_METMP (Q6M0L0) 50S ribosomal protein L1P|
          Length = 213

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 1/121 (0%)
 Frame = +2

Query: 116 IGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXX 292
           + LK  D  + + R    + LP      + + ++       QAE MGL  +  E      
Sbjct: 30  VNLKELDLSRPENRLKEQIVLPSGRGKDVAIAVIAKGDLAAQAEDMGLTVIRQEELEELG 89

Query: 293 XXXXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKAT 472
                       +  F+A   ++  + + LGP L   GK P  V    +L   V   + T
Sbjct: 90  KNKKTAKKIANAHGFFIAQADMMPLVGKSLGPVLGPRGKMPQPVPANANLAPLVARFQKT 149

Query: 473 V 475
           V
Sbjct: 150 V 150

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>RL1_SULAC (P35024) 50S ribosomal protein L1P|
          Length = 221

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
 Frame = +2

Query: 125 KNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDV-ESXXXXXXX 298
           K  D +K D +    V LP  P    RV ++   + ++ A+K   + +   E        
Sbjct: 40  KGIDMKKGDLKLREIVPLPKQPSKAKRVLVVPSFEQLEYAKKASPNVVITREELQKLQGQ 99

Query: 299 XXXXXXXXXXYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATV 475
                        FL ++  +    R+LGP L   GKFPT + +   +   +N  K +V
Sbjct: 100 KRPVKKLARQNEWFLINQESMALAGRILGPALGPRGKFPTPLPNTADISEYINRFKRSV 158

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>RL1_AQUAE (O67759) 50S ribosomal protein L1|
          Length = 242

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 128 NYDPQ-KDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           N DP+  D+   GSV LPH     ++V +  + ++  +AE+ G DY+
Sbjct: 52  NVDPRYADQMVRGSVVLPHGLGKPIKVVVFAEGEYAKKAEEAGADYV 98

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>RL1_HALMA (P12738) 50S ribosomal protein L1P (Hmal1) (HL8)|
          Length = 211

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 22/111 (19%), Positives = 43/111 (38%)
 Frame = +2

Query: 152 RFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVESXXXXXXXXXXXXXXXXXY 331
           R   SV LP     +  + +  + +   +AE++  D +D +                   
Sbjct: 42  RVDESVVLPAGTGQETTIVVFAEGETALRAEEVADDVLDEDELEELGGDDDAAKDLADDT 101

Query: 332 HAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQ 484
             F+A + +++ I R LG  L   GK P  +   + +   +   K TV+ +
Sbjct: 102 DFFIAEKGLMQDIGRYLGTVLGPRGKMPEPLDPDDDVVEVIERMKNTVQLR 152

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>RL1_BACSK (Q5WLS4) 50S ribosomal protein L1|
          Length = 231

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           DP+K D++  G+V LPH      RV +    +   +AE  G DY+
Sbjct: 51  DPKKADQQIRGAVVLPHGTGKTQRVLVFAKGEKAKEAEAAGADYV 95

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>TINAL_HUMAN (Q9GZM7) Tubulointerstitial nephritis antigen-like precursor|
           (Tubulointerstitial nephritis antigen-related protein)
           (TIN Ag-related protein) (TIN-Ag-RP)
           (Glucocorticoid-inducible protein 5) (Oxidized
           LDL-responsive gene 2 protein) (OLRG-2)
          Length = 467

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 49  SPXLLGRPEXKKRKFTETVELQXWSQELRPTKG*TFQWLCEAAPYPPPKDEGVH 210
           +P  LGRPE  +R  T +V++  W +E  P  G T ++   A  + P   E  H
Sbjct: 384 TPVSLGRPERYRRHGTHSVKITGWGEETLP-DGRTLKYWTAANSWGPAWGERGH 436

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>RL1_ONYPE (Q6YQW6) 50S ribosomal protein L1|
          Length = 230

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 128 NYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           N DP+K D+   G++ LPH     ++V +L   +   QA++   DY+
Sbjct: 48  NLDPKKVDQNLRGALVLPHGTGKVLKVAVLAKGEQAKQAQEAQADYV 94

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>RL1_GEOKA (Q5L420) 50S ribosomal protein L1|
          Length = 233

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 107 SFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           +F +G+   DP+K D++  G+V LPH      RV +    +   +AE  G DY+
Sbjct: 45  AFRLGV---DPKKADQQIRGAVVLPHGTGKVARVLVFAKGEKAKEAEAAGADYV 95

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>RL1_BACST (P04447) 50S ribosomal protein L1|
          Length = 232

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 107 SFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           +F +G+   DP+K D++  G+V LPH      RV +    +   +AE  G DY+
Sbjct: 44  AFRLGV---DPKKADQQIRGAVVLPHGTGKVARVLVFAKGEKAKEAEAAGADYV 94

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>RL1_THEFY (Q47LI2) 50S ribosomal protein L1|
          Length = 235

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           DP+K D+   G+V LPH      RV +    +  +QA   G DY+
Sbjct: 50  DPRKADQMVRGTVNLPHGTGKTARVLVFAAGERAEQARAAGADYV 94

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>RL1_STAES (Q8CTT4) 50S ribosomal protein L1|
          Length = 231

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 140 QKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           + D++  G+V LPH      RV +      + +AE+ G DY+
Sbjct: 54  KNDQQIRGAVVLPHGTGKSQRVLVFAKGDKITEAEEAGADYV 95

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>RL1_STAEQ (Q5HRL4) 50S ribosomal protein L1|
          Length = 231

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 140 QKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           + D++  G+V LPH      RV +      + +AE+ G DY+
Sbjct: 54  KNDQQIRGAVVLPHGTGKSQRVLVFAKGDKITEAEEAGADYV 95

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>VIT2_CAEEL (P05690) Vitellogenin 2 precursor|
          Length = 1613

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 329 YHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVS--HQESLEAKVNETKATVK 478
           +HA    EAI ++ P  LG  L  +GK PT++S   Q SLE +  E + TV+
Sbjct: 822 HHAAYFYEAI-RKFPTTLGLPLTISGKIPTVISAEGQFSLELEGTELRLTVE 872

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>Y016_MYCPN (P75097) Hypothetical protein MG012 homolog (D12_orf288)|
          Length = 288

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +2

Query: 332 HAFLASEAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKF 481
           HA LA    IKQIP L+GP   +   +P      E LE  + + K   +F
Sbjct: 97  HAVLAQHPTIKQIPTLIGPQNFRLAWYP------EKLEQFIEQIKRCFQF 140

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>RL1_LACSS (Q38V06) 50S ribosomal protein L1|
          Length = 229

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 128 NYDP-QKDKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVE 274
           N DP Q D++  G+V LP+      RV +    +   QAE  G D +  E
Sbjct: 49  NVDPKQADQQIRGAVVLPNGTGKTQRVIVFAQGEQAKQAEAAGADVVGAE 98

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>RL1_OCEIH (Q8ETZ2) 50S ribosomal protein L1|
          Length = 230

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 107 SFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           +F +G+   DP+K D++  G+  LPH      RV +    +   +AE  G DY+
Sbjct: 45  AFRLGV---DPKKADQQIRGAFVLPHGTGKTQRVLVFAKGEKAKEAEAAGADYV 95

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>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)|
          Length = 512

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 260 SQVPFSQPGQRAGHHQACTPSSLGGGYGAASQS 162
           SQ  + Q     G+ Q   PSS  G YG++SQS
Sbjct: 87  SQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQS 119

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>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)|
           (Translocated in liposarcoma protein) (POMp75) (75 kDa
           DNA-pairing protein)
          Length = 526

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 260 SQVPFSQPGQRAGHHQACTPSSLGGGYGAASQS 162
           SQ  + Q     G+ Q   PSS  G YG++SQS
Sbjct: 87  SQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQS 119

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>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)|
          Length = 518

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 260 SQVPFSQPGQRAGHHQACTPSSLGGGYGAASQS 162
           SQ  + Q     G+ Q   PSS  G YG +SQS
Sbjct: 88  SQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQS 120

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>PIGO_MOUSE (Q9JJI6) Phosphatidylinositol-glycan biosynthesis, class O protein|
           (PIG-O)
          Length = 1093

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 118 WSQELRPTKG*TFQWLCEAAPYPPPKDEGVHA 213
           W  +L P K  T   L  +AP  PP+  G HA
Sbjct: 591 WEGQLLPPKPLTMSRLGSSAPTAPPRHSGAHA 622

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>YKD3_YEAST (P36097) Hypothetical 118.9 kDa protein in PTM1-IXR1 intergenic|
           region
          Length = 1038

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/45 (26%), Positives = 28/45 (62%)
 Frame = +2

Query: 350 EAIIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQ 484
           + +I ++ R L   LN++ + P+L++H+E +  + ++   TV F+
Sbjct: 421 DTMINEVVRCLFESLNESIEPPSLINHKERIIEQSSQLTTTVNFE 465

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>MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI)|
          Length = 1265

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/74 (27%), Positives = 30/74 (40%)
 Frame = +2

Query: 50  HPXCWGGQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPKMRVCMLGDAQH 229
           H   W G  K+N    R+ +  + L N D ++    SG   L +   P +  C       
Sbjct: 324 HEKNWFGMMKKNFDLFRVVAGVLHLGNIDLEEAGSTSGGCNLKNKSAPSLEYC------- 376

Query: 230 VDQAEKMGLDYMDV 271
              AE +GLD  D+
Sbjct: 377 ---AELLGLDQDDL 387

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>VPS41_ARATH (P93043) Vacuolar assembly protein VPS41 homolog|
          Length = 976

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 38  QGCHHPXCWGGQXKRNASSLRLWSFXIGLKNYDPQKDKRFSGSVKLPHIPRPK 196
           +G  H   W G       SL  W+  +G+K YD  KD+R +   K    PRP+
Sbjct: 177 EGPIHSVKWRG-------SLIAWANDVGVKVYDTAKDQRVTFIEKPRGSPRPE 222

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>RL1_THETN (Q8R7U3) 50S ribosomal protein L1|
          Length = 231

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVE 274
           DP+  D++  G+V LPH     ++V +    +   +AE  G DY+  E
Sbjct: 50  DPRHADQQVRGTVILPHGTGKTVKVLVFAKGEKAKEAEAAGADYVGAE 97

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>RL1_BACLD (Q65PB9) 50S ribosomal protein L1|
          Length = 232

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 107 SFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           +F +G+   DP+K D++  G+V LP+      RV +    +   +AE  G DY+
Sbjct: 45  AFRLGV---DPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYV 95

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>RL1_BACHD (Q9KGE5) 50S ribosomal protein L1|
          Length = 231

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVE 274
           DP+K D++  G+V LP+      RV +    +   +AE  G DY+  E
Sbjct: 51  DPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGDE 98

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>RL1_LISMO (Q8YAA4) 50S ribosomal protein L1|
          Length = 229

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 107 SFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           +F +G+   DP+K D++  G+V LP+      RV +    +   +AE  G DY+
Sbjct: 45  AFRLGV---DPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYV 95

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>RL1_LISMF (Q724G3) 50S ribosomal protein L1|
          Length = 229

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 107 SFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           +F +G+   DP+K D++  G+V LP+      RV +    +   +AE  G DY+
Sbjct: 45  AFRLGV---DPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYV 95

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>RL1_LISIN (Q92F26) 50S ribosomal protein L1|
          Length = 229

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 107 SFXIGLKNYDPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYM 265
           +F +G+   DP+K D++  G+V LP+      RV +    +   +AE  G DY+
Sbjct: 45  AFRLGV---DPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYV 95

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>RL1_SULTO (Q971J1) 50S ribosomal protein L1P|
          Length = 222

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 338 FLASEAIIKQIPRLLGPGLNKAGKFPT 418
           FL ++  +  + R+LGP L   GKFPT
Sbjct: 113 FLVAQDSMALVGRILGPALGPRGKFPT 139

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>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)|
          Length = 2001

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 16   VSSKVMLSRXPSPXLLGRPEXKKRKFT 96
            V  KV  SR P P LL  P+ +K+KFT
Sbjct: 1657 VVQKVPPSRYPPPALLPAPDKEKQKFT 1683

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>RL1_CARHZ (Q3A9Q3) 50S ribosomal protein L1|
          Length = 231

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 134 DPQK-DKRFSGSVKLPHIPRPKMRVCMLGDAQHVDQAEKMGLDYMDVE 274
           DP+  D++  G+V LPH      +V +    +   +AE  G DY+  E
Sbjct: 51  DPRHADQQVRGAVVLPHGTGKTRKVLVFAKGEKAKEAEAAGADYVGAE 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,141,505
Number of Sequences: 219361
Number of extensions: 1132224
Number of successful extensions: 3147
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 3021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3111
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result