ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7n17 |
|---|---|
| Clone Library Name | barley_pub |
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 114 bits (286), Expect = 7e-26 Identities = 58/95 (61%), Positives = 72/95 (75%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAI 182 DELR+S A+D+VKRV GS VPVLDGE+ SVR+LVDHSIV+SFA GGR TSR YPT AI Sbjct: 569 DELRASKANDLVKRVYGSLVPVLDGENLSVRILVDHSIVESFAQGGRTCITSRVYPTRAI 628 Query: 183 YAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIY 287 Y +A V+LFNNAT V A+ + + ++S+Y Y Sbjct: 629 YDSARVFLFNNATHAHVKAKSVKIWQLNSAYIRPY 663
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 108 bits (270), Expect = 5e-24 Identities = 56/79 (70%), Positives = 62/79 (78%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAI 182 D+ RSS ASDV K V GS VPVL GE S+R+LVDHSIV+SFA GGR TSR YPT AI Sbjct: 563 DQSRSSTASDVDKEVYGSDVPVLHGESLSMRLLVDHSIVESFAQGGRTVITSRVYPTRAI 622 Query: 183 YAAAGVYLFNNATGTSVTA 239 Y+AA V+LFNNATG SVTA Sbjct: 623 YSAARVFLFNNATGVSVTA 641
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 107 bits (266), Expect = 1e-23 Identities = 56/91 (61%), Positives = 70/91 (76%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAI 182 D+ RSS A+DV K++ GS VPVL GE FS+R+LVDHSIV+SFA GGR TSR YPT+AI Sbjct: 548 DQSRSSQANDVRKQIFGSVVPVLKGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAI 607 Query: 183 YAAAGVYLFNNATGTSVTAEKLIVHDMDSSY 275 Y AA ++LFNNAT +VTA L V M+S++ Sbjct: 608 YGAARLFLFNNATEATVTA-SLKVWQMNSAF 637
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 105 bits (263), Expect = 3e-23 Identities = 57/98 (58%), Positives = 71/98 (72%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAI 182 D+ RSS A+DV K++ GS VPVL+GE S+R+LVDHSIV+SFA GGR TSR YPT AI Sbjct: 540 DQSRSSLANDVHKQIYGSVVPVLEGEKLSLRILVDHSIVESFAQGGRTCITSRVYPTRAI 599 Query: 183 YAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIYTDD 296 Y AA ++LFNNA T+VTA L V M+S++ Y D Sbjct: 600 YGAARLFLFNNAIETNVTA-SLKVWQMNSAFIRPYHPD 636
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 104 bits (259), Expect = 9e-23 Identities = 53/91 (58%), Positives = 70/91 (76%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAI 182 D+ RSS +DV K++ G+ VPVL+GE FS+R+LVDHSIV+SFA GGR TSR YPT+AI Sbjct: 550 DQSRSSQPNDVRKQIFGNIVPVLEGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAI 609 Query: 183 YAAAGVYLFNNATGTSVTAEKLIVHDMDSSY 275 Y AA ++LFNNAT +VTA L + M+S++ Sbjct: 610 YGAARLFLFNNATEATVTA-SLKIWQMNSAF 639
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 101 bits (252), Expect = 6e-22 Identities = 51/79 (64%), Positives = 62/79 (78%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAI 182 D+ RSS A V K+V GS+VPVLDGE S+R+LVDHSIV+SFA GGR TSR YPT+A+ Sbjct: 538 DQTRSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAV 597 Query: 183 YAAAGVYLFNNATGTSVTA 239 AA +++FNNATG SVTA Sbjct: 598 NGAARLFVFNNATGASVTA 616
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 98.6 bits (244), Expect = 5e-21 Identities = 49/79 (62%), Positives = 60/79 (75%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAI 182 D+ RSS A V K+V GS+VPVLDGE +R+LVDHSIV+SFA GGR TSR YPT+A+ Sbjct: 542 DQTRSSEAPGVAKQVYGSSVPVLDGEKHRMRLLVDHSIVESFAQGGRTVITSRIYPTKAV 601 Query: 183 YAAAGVYLFNNATGTSVTA 239 AA +++FNNATG VTA Sbjct: 602 NGAARLFVFNNATGAIVTA 620
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 62.4 bits (150), Expect = 4e-10 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 2/89 (2%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGED--FSVRVLVDHSIVQSFAMGGRLTATSRAYPTE 176 D RSS +DV K G V V +D S+R L+DHS+++SF GGR T+R YP Sbjct: 422 DLTRSSTKADVYKDAYGGFVDVDIQKDKSISLRTLIDHSMIESFGGGGRACITTRVYPEH 481 Query: 177 AIYAAAGVYLFNNATGTSVTAEKLIVHDM 263 A +++ +Y+FNN +GT V KL +M Sbjct: 482 AATSSSHLYVFNNGSGT-VNVSKLEAWEM 509
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 55.1 bits (131), Expect = 7e-08 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVP--VLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTE 176 D +SS + V K G V + D + S+R L+DHS+V+SF GGR T+R YP Sbjct: 480 DLTKSSTRAGVYKPAYGGFVDMDIDDHKTISLRTLIDHSVVESFGGGGRACITARVYPEH 539 Query: 177 AIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIYTDD 296 +++ +Y+FNN + +V KL D+ ++ ++ D Sbjct: 540 VATSSSHLYVFNNGS-DAVKVAKLEAWDLATATVNVVVGD 578
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 53.1 bits (126), Expect = 2e-07 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLDGED--FSVRVLVDHSIVQSFAMGGRLTATSRAYPTE 176 D RS+ + V K G V + +D S+R L+DHSIV+SF GGR T+R YP Sbjct: 484 DLTRSTSRAGVYKPSHGGFVDIDIEKDRAISLRTLIDHSIVESFGGGGRTCMTARVYPEH 543 Query: 177 AIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIYTDDDLVVVG 314 ++ +Y+FNNA+ +V KL ++ ++ + DD L+ G Sbjct: 544 VATGSSHLYVFNNAS-DAVKVSKLEAWELATASVNA-GDDGLISYG 587
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 52.0 bits (123), Expect = 6e-07 Identities = 26/63 (41%), Positives = 40/63 (63%) Frame = +3 Query: 60 VPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYLFNNATGTSVTA 239 V + + S+R L+D+S+V+SF G+ +SR YPT A+Y A +Y+FNN + T +T Sbjct: 519 VDLATDKKISLRSLIDNSVVESFGAKGKTCISSRVYPTLAVYENAHLYVFNNGSET-ITV 577 Query: 240 EKL 248 E L Sbjct: 578 ENL 580
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 51.6 bits (122), Expect = 7e-07 Identities = 27/60 (45%), Positives = 38/60 (63%) Frame = +3 Query: 69 LDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYLFNNATGTSVTAEKL 248 L + S+R L+D+S+V+SF GR TSR YP AIY A V++FNN T ++T + L Sbjct: 520 LSDKKISLRSLIDNSVVESFGAHGRTCITSRVYPKIAIYNNAHVFVFNNGT-EAITIDSL 578
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 50.4 bits (119), Expect = 2e-06 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPV-LDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEA 179 D RSS A + K V V L + S+R L+D+S+V+SF + +SR YPT A Sbjct: 490 DAKRSSLAEGLYKPSFRGFVDVDLSDKKISLRSLIDNSVVESFGAQRKNLISSRVYPTLA 549 Query: 180 IYAAAGVYLFNNATGTSVTAEKLIVHDMDS 269 IY A +++FNN T +T + L M+S Sbjct: 550 IYNNAHLFVFNNGT-EPITVDNLDAWSMNS 578
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 48.1 bits (113), Expect = 8e-06 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPV-LDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEA 179 D +SS + D+ K V + S+R L+D S+V+SF GG+ SR YP+ A Sbjct: 483 DPTKSSLSPDLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMA 542 Query: 180 IYAAAGVYLFNN 215 I A +Y+FNN Sbjct: 543 IGDKAHLYVFNN 554
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 47.0 bits (110), Expect = 2e-05 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPV-LDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEA 179 D +SS + D+ K V + ++R L+D S+V+SF GG+ SR YP+ A Sbjct: 496 DPTKSSLSPDLYKPTFAGFVDADISSGKITLRSLIDRSVVESFGAGGKTCILSRVYPSIA 555 Query: 180 IYAAAGVYLFNNATGTSVTAEKLIVHDM 263 + A +Y+FNN VT L +M Sbjct: 556 VGKDAHLYVFNNGE-VDVTVSGLTAWEM 582
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 47.0 bits (110), Expect = 2e-05 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPV--LDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTE 176 D RSS+ S + + V V + ++R L+DHS+V+SF G+ +R YP + Sbjct: 490 DPTRSSYESKIYRPTFAGFVDVDIAKNKQIALRTLIDHSVVESFGARGKTCILTRVYPRK 549 Query: 177 AIYAAAGVYLFNN 215 A+ A +++FNN Sbjct: 550 AVGDDAHLFVFNN 562
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 45.1 bits (105), Expect = 7e-05 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = +3 Query: 87 SVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYLFNN 215 S+R L+D S+V+SF GG+ SR YP+ AI A +Y+FNN Sbjct: 532 SLRSLIDRSVVESFGAGGKACILSRVYPSLAIGKNARLYVFNN 574
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 44.7 bits (104), Expect = 9e-05 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = +3 Query: 87 SVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYLFNNATGT 227 S+R L+D S V+SF GGR +R YP + A +Y FNN + T Sbjct: 523 SLRTLIDRSAVESFGGGGRACIMARVYPAAVVDGATHMYAFNNGSST 569
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 43.9 bits (102), Expect = 2e-04 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = +3 Query: 3 DELRSSHASDVVKRVVGSTVPVLD-GEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEA 179 D+ RSS D G+ V V E S+R L+DHS+V+SF GR T+R YPT A Sbjct: 483 DQSRSSLNKDNDMTSYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACVTARVYPTLA 542 Query: 180 IYAAA 194 I+ A Sbjct: 543 IHDKA 547
>SYA_PONPY (Q5RC02) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 968 Score = 36.6 bits (83), Expect = 0.024 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = +3 Query: 72 DGEDFSVRVLVDH--SIVQSFAMGGRLTATSRAYPTEAIYAAAGVYL---FNNATGTSVT 236 DG D + RVL DH +I + A GGR T R Y I A Y N + G T Sbjct: 289 DGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFAT 348 Query: 237 AEKLIVHDMDSSYNHIYTDDDLV 305 ++V + ++ + D D+V Sbjct: 349 LVDVVVQSLGDAFPELKKDPDMV 371
>SYA_HUMAN (P49588) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) (NY-REN-42 antigen) Length = 968 Score = 36.6 bits (83), Expect = 0.024 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = +3 Query: 72 DGEDFSVRVLVDH--SIVQSFAMGGRLTATSRAYPTEAIYAAAGVYL---FNNATGTSVT 236 DG D + RVL DH +I + A GGR T R Y I A Y N + G T Sbjct: 289 DGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFAT 348 Query: 237 AEKLIVHDMDSSYNHIYTDDDLV 305 ++V + ++ + D D+V Sbjct: 349 LVDVVVQSLGDAFPELKKDPDMV 371
>SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 968 Score = 34.7 bits (78), Expect = 0.092 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = +3 Query: 72 DGEDFSVRVLVDH--SIVQSFAMGGRLTATSRAYPTEAIYAAAGVY---LFNNATGTSVT 236 DG D + RVL DH +I + A GGR T R Y I A Y N + G T Sbjct: 289 DGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFAT 348 Query: 237 AEKLIVHDMDSSYNHIYTDDDLV 305 ++V + ++ + D ++V Sbjct: 349 LVDVVVQSLGDAFPELKKDPEMV 371
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 33.1 bits (74), Expect = 0.27 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Frame = -2 Query: 343 STTSCKRS-A*PTTTKSSSVYIWLYDESISCTMSFSAVTLVPVALLNR*TPAAA*MASVG 167 +TTS K S + PT+T SS+ S S T+S ++ T + + T + +S Sbjct: 181 TTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSS-TLISTSTSSSS 239 Query: 166 YALDVAVNLPPIAKLWTMEWSTSTRT----EKSSPSSTGTVLPT-TRFTTS 29 + + PI+ T STST T S+P+S+ PT T FTT+ Sbjct: 240 SSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTT 290
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 32.3 bits (72), Expect = 0.45 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 1/112 (0%) Frame = -2 Query: 364 SHRPSNQSTTSCKRSA*PTTTKSSSVYIWLYDESISCTMSFSAVTLVPVALLNR*TPA-A 188 +H S+ STTS S+ TTT SSS S S T + S + +P+ Sbjct: 162 THSSSSSSTTSTTTSSSETTTSSSS------SSSSSSTSTTSTTSTTSSTTSTSSSPSTT 215 Query: 187 A*MASVGYALDVAVNLPPIAKLWTMEWSTSTRTEKSSPSSTGTVLPTTRFTT 32 + S + + + + + STST T S+PSST ++ +T +TT Sbjct: 216 SSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSST-SIGTSTHYTT 266
>YMH1_CAEEL (P34468) Hypothetical protein F58A4.1| Length = 254 Score = 30.8 bits (68), Expect = 1.3 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -2 Query: 106 STSTRTEKSSPSSTGTVLPTTRFTTS 29 STST T S+ ST TV PTTR +T+ Sbjct: 104 STSTSTSTSTSRSTSTVTPTTRSSTT 129
>TYDC3_PAPSO (P54770) Tyrosine/DOPA decarboxylase 3 [Includes: DOPA| decarboxylase (EC 4.1.1.28) (DDC); Tyrosine decarboxylase (EC 4.1.1.25)] Length = 533 Score = 30.0 bits (66), Expect = 2.3 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 141 RLTATSRAYPTEAIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNH 281 ++ AT Y T A+ GVY+ A G+++T E+ ++H + H Sbjct: 474 QVKATGSVYMTHAV--VGGVYMIRFAVGSTLTEERHVIHAWEVLQEH 518
>POP8_SCHPO (Q7Z996) Probable ribonucleases P protein subunit pop8 (EC| 3.1.26.5) Length = 108 Score = 30.0 bits (66), Expect = 2.3 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +3 Query: 18 SHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGG 140 S S ++ VVG T P+ + +D S+R L+ ++ QSF + G Sbjct: 9 SEWSYIILEVVGGTTPIDEIDDISLRHLITLALNQSFGIFG 49
>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)| Length = 1244 Score = 28.5 bits (62), Expect = 6.6 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 108 GPRAPGQKSPRRRAPALCYPPPASPHR 28 GP P SP +P+L PPP+ PHR Sbjct: 941 GPPTPASHSP---SPSLPPPPPSPPHR 964
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/35 (48%), Positives = 18/35 (51%) Frame = -3 Query: 111 SGPRAPGQKSPRRRAPALCYPPPASPHR*HVMTAT 7 SG R P P RR PA PP PHR HV + T Sbjct: 337 SGVRLPAPPPPPRRGPA----PPPPPHR-HVTSNT 366
>MPDZ_MOUSE (Q8VBX6) Multiple PDZ domain protein (Multi PDZ domain protein 1)| (Multi-PDZ domain protein 1) Length = 2055 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 117 QWSGPRAPGQKSPRRRAPALCYPPPASP 34 Q + +AP Q PALC PP+SP Sbjct: 1263 QLTTDQAPSQSESETEKPALCNVPPSSP 1290
>PKNB_LACLA (Q9CEF5) Probable serine/threonine-protein kinase pknB (EC| 2.7.11.1) Length = 627 Score = 28.1 bits (61), Expect = 8.6 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Frame = -2 Query: 244 FSAVTLVPVALLNR*TPAAA*MA--SVGYALDVAVNLPPIAKLWTMEWSTSTRTEKSSPS 71 F+ +TL P A N+ +VG ++D + ++T S+ST +E ++ S Sbjct: 532 FTNITLDPQATTNQQADGYVYSVYPNVGTSVDPTQEIVVTYSVYTAPSSSSTTSESTTTS 591 Query: 70 STG--TVLPTTRFTTSLACDDRNSS 2 T T T+ TTS D N+S Sbjct: 592 ETSSSTTSSTSSSTTSQPSTDNNNS 616
>DAB_DROME (P98081) Protein disabled| Length = 2224 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +3 Query: 78 EDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGV 200 ED +R ++DH VQ+ A SR +PTE +A V Sbjct: 1198 EDHDLRQIMDHQNVQTHARDRHGLVDSRGFPTEPSSSALTV 1238
>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)| Length = 1262 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = -3 Query: 105 PRAPGQKSPRRRAPALC--YPPPASP 34 P PGQ +P+R P L PPPA+P Sbjct: 248 PAPPGQAAPQRPPPPLAAVNPPPAAP 273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,010,772 Number of Sequences: 219361 Number of extensions: 1046341 Number of successful extensions: 4045 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3669 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4035 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
