ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8c13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF493985.1| Triticum aestivum H2A-1 gene, partial sequence Length = 538 Score = 347 bits (175), Expect = 2e-92 Identities = 272/301 (90%), Gaps = 5/301 (1%) Strand = Plus / Minus Query: 18 tcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaact 77 |||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 343 tcggcaagctgctcgccggcgtcaccatcgcccacggcggtgtgatccccaacatcaact 284 Query: 78 ccgtgctgctcccgaagaagtcccccgccgccgccgagnaaggaggccaagtcgcccaag 137 ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 283 ccgtgctgctccccaagaagtcccctgccgccgccgag-aaggaggccaagtcgcccaag 225 Query: 138 taagaaggccgccaccaagtcccccaagaagaaggcccccgccaccaaggagtaac---t 194 |||||| | ||| |||||||||||||||||||| | ||||||| |||||||| | Sbjct: 224 -aagaagacggccgccaagtcccccaagaagaagacggccgccacgaaggagtagccgtc 166 Query: 195 gctcccatagcctaaccagtgttgcttagatccatttctcatggactaagatgagatcct 254 | ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 165 gtccccatagcctagccattgttgcttagatccatttctcatggactaagatgggatcct 106 Query: 255 gtatgtaatgcctggtagtctgtagtgcctgttagattcgtcgagcaatggtgacattgt 314 ||||||| |||||| |||||||||||||| || ||||||||||||||| ||||||||||| Sbjct: 105 gtatgtagtgcctgctagtctgtagtgcccgtcagattcgtcgagcaagggtgacattgt 46 Query: 315 a 315 | Sbjct: 45 a 45
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 232 bits (117), Expect = 8e-58 Identities = 155/165 (93%), Gaps = 2/165 (1%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 333 ctcggcaggctgctcgctggcgtcaccatcgcccacggtggcgtgatccccaacatcaac 392 Query: 77 tccgtgctgctcccgaagaagtcccccgccgccgccgagnaaggaggccaagtcgcccaa 136 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 393 tccgtgctgctccccaagaagtcccccgccgccgccgag-aaggaggccaagtcgcccaa 451 Query: 137 gtaagaaggccgccaccaagtcccccaagaagaaggcccccgcca 181 | |||||| || |||||||||||||||||||||||| | |||||| Sbjct: 452 g-aagaagacctccaccaagtcccccaagaagaaggtcgccgcca 495
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 232 bits (117), Expect = 8e-58 Identities = 161/175 (92%), Gaps = 8/175 (4%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 415 Query: 77 tccgtgctgctcccgaagaagtcccccgccgccgccgagnaaggaggccaagtcgcccaa 136 |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 416 tccgtgctgctccccaagaagtcccccgcagccgccgag-aaggaggccaagtcgc---- 470 Query: 137 gtaagaaggccgccaccaagtcccccaagaagaaggcccccgccaccaaggagta 191 ||||||||||| |||||||||||||||||||| || | |||||||||||||| Sbjct: 471 ---agaaggccgccgccaagtcccccaagaagaagaccgcagccaccaaggagta 522 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 253 ctgtatgtaatgcctggtagtctgtagtg 281 ||||||||||||||||||||||||||||| Sbjct: 612 ctgtatgtaatgcctggtagtctgtagtg 640
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 230 bits (116), Expect = 3e-57 Identities = 210/234 (89%), Gaps = 8/234 (3%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2155 ctcggcaggctgcttgccggcgtcaccatcgcccacggcggcgtcatccccacaatcaac 2214 Query: 77 tccgtgctgctcccgaagaagtcccccgccgccgccgagnaaggaggccaagtcgcccaa 136 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2215 tccgtgctgctgcccaagaagtcccccgccgccgccgag-aaggaggccaagtcgcccaa 2273 Query: 137 gtaagaaggccgccaccaagtcccccaagaagaaggcccccgccaccaaggagta-actg 195 | |||||| || |||||||||||||||||||||||| ||| |||||||||| | | Sbjct: 2274 g-aagaagacctccaccaagtcccccaagaagaagg---ttgccgccaaggagtagaatt 2329 Query: 196 ctcccatagcctaaccagtgttgcttagatccatttctcatggactaagatgag 249 | |||||||| || ||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 2330 c-cccatagcatagccattgttgcttagatccatttctcgtggac-aagatgag 2381
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 230 bits (116), Expect = 3e-57 Identities = 210/234 (89%), Gaps = 8/234 (3%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2155 ctcggcaggctgcttgccggcgtcaccatcgcccacggcggcgtcatccccacaatcaac 2214 Query: 77 tccgtgctgctcccgaagaagtcccccgccgccgccgagnaaggaggccaagtcgcccaa 136 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2215 tccgtgctgctgcccaagaagtcccccgccgccgccgag-aaggaggccaagtcgcccaa 2273 Query: 137 gtaagaaggccgccaccaagtcccccaagaagaaggcccccgccaccaaggagta-actg 195 | |||||| || |||||||||||||||||||||||| ||| |||||||||| | | Sbjct: 2274 g-aagaagacctccaccaagtcccccaagaagaagg---ttgccgccaaggagtagaatt 2329 Query: 196 ctcccatagcctaaccagtgttgcttagatccatttctcatggactaagatgag 249 | |||||||| || ||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 2330 c-cccatagcatagccattgttgcttagatccatttctcgtggac-aagatgag 2381
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 224 bits (113), Expect = 2e-55 Identities = 162/175 (92%), Gaps = 5/175 (2%) Strand = Plus / Plus Query: 20 ggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactcc 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 ggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactcc 416 Query: 80 gtgctgctcccgaagaagtcccccgccgccgccgagnaaggag---gccaagtcgcccaa 136 ||||||||||| |||||| || ||| |||||||||| |||||| ||||||||||||| Sbjct: 417 gtgctgctccccaagaaggccgccggcgccgccgag-aaggagtccaccaagtcgcccaa 475 Query: 137 gtaagaaggccgccaccaagtcccccaagaagaaggcccccgccaccaaggagta 191 | ||||||||||||||||||||||||||||||||| || | |||||||||||||| Sbjct: 476 g-aagaaggccgccaccaagtcccccaagaagaagaccgcagccaccaaggagta 529
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 412 ctcggcaagctgctgtccggcgtcaccatcgcccacggcggcgtcctccccaacatcaac 471 Query: 77 tccgtgctgctcccgaagaag 97 | ||||| || || |||||| Sbjct: 472 ccggtgctcctgcccaagaag 492
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 89.7 bits (45), Expect = 7e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||| Sbjct: 538 gctgctggccggcgtcaccatcgcgcacggcggcgtcctccccaacatccactccgtgct 597 Query: 85 gctcccgaagaag 97 || || |||||| Sbjct: 598 cctgcccaagaag 610
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 412 ctcggcaagctgctgtccggcgtcaccatcgcccacggcggcgtcctccccaacatcaac 471 Query: 77 tccgtgctgctcccgaagaag 97 | ||||| || || |||||| Sbjct: 472 ccggtgctcctgcccaagaag 492 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/52 (86%), Gaps = 7/52 (13%) Strand = Plus / Plus Query: 117 aaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccccaagaag 168 ||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 514 aaggaggccaagtcgcccaag----aaggccgcca---agtcccccaagaag 558
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||||||||| ||||||||||| ||||||||||| | || ||||||||| | ||||| Sbjct: 369 gctgctcgccggggtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgct 428 Query: 85 gctcccgaagaag 97 ||||||||||||| Sbjct: 429 gctcccgaagaag 441
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| ||||| |||||| ||||||||||| |||||||||| Sbjct: 389 gctgctggccggcgtcaccatcgcgcacggtggcgtcctccccaacatccactccgtgct 448 Query: 85 gctcccgaagaag 97 || || |||||| Sbjct: 449 cctgcccaagaag 461
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||||||||| ||||||||||| ||||||||||| | || ||||||||| | ||||| Sbjct: 707332 gctgctcgccggggtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgct 707391 Query: 85 gctcccgaagaag 97 ||||||||||||| Sbjct: 707392 gctcccgaagaag 707404 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| |||||||| || | |||||||||||| | ||||| Sbjct: 22512399 gctgctggccggcgtcaccatcgcgcacggcggggtgctgcccaacatcaacccggtgct 22512340 Query: 85 gctcccgaagaag 97 |||||| |||||| Sbjct: 22512339 gctccccaagaag 22512327
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||||||||| ||||||||||| ||||||||||| | || ||||||||| | ||||| Sbjct: 395 gctgctcgccggggtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgct 454 Query: 85 gctcccgaagaag 97 ||||||||||||| Sbjct: 455 gctcccgaagaag 467
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||||||||| ||||||||||| ||||||||||| | || ||||||||| | ||||| Sbjct: 52531 gctgctcgccggggtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgct 52590 Query: 85 gctcccgaagaag 97 ||||||||||||| Sbjct: 52591 gctcccgaagaag 52603
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| |||||||| || | |||||||||||| | ||||| Sbjct: 321 gctgctggccggcgtcaccatcgcgcacggcggggtgctgcccaacatcaacccggtgct 380 Query: 85 gctcccgaagaag 97 |||||| |||||| Sbjct: 381 gctccccaagaag 393
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| |||||||| || | |||||||||||| | ||||| Sbjct: 7449 gctgctggccggcgtcaccatcgcgcacggcggggtgctgcccaacatcaacccggtgct 7390 Query: 85 gctcccgaagaag 97 |||||| |||||| Sbjct: 7389 gctccccaagaag 7377
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| |||||||| || | |||||||||||| | ||||| Sbjct: 101806 gctgctggccggcgtcaccatcgcgcacggcggggtgctgcccaacatcaacccggtgct 101747 Query: 85 gctcccgaagaag 97 |||||| |||||| Sbjct: 101746 gctccccaagaag 101734
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| |||||||| || | |||||||||||| | ||||| Sbjct: 391 gctgctggccggcgtcaccatcgcgcacggcggggtgctgcccaacatcaacccggtgct 450 Query: 85 gctcccgaagaag 97 |||||| |||||| Sbjct: 451 gctccccaagaag 463
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| ||||||||||||||||| |||||||| || | |||||||||||| | ||||| Sbjct: 392 gctgctggccggcgtcaccatcgcgcacggcggggtgctgcccaacatcaacccggtgct 451 Query: 85 gctcccgaagaag 97 |||||| |||||| Sbjct: 452 gctccccaagaag 464
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| |||||||| |||||||| ||||| ||||| | |||||||||||| Sbjct: 319 ctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaac 378 Query: 77 tccgtgctgctcccgaagaag 97 | |||||||| || |||||| Sbjct: 379 ccggtgctgctgcccaagaag 399 Score = 54.0 bits (27), Expect = 4e-04 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Plus Query: 102 ccgccgccgccgagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccc 161 |||||||||||| | |||||||||||||||||| |||||||| ||| ||||||||| Sbjct: 413 ccgccgccgccg-gcaaggaggccaagtcgccc----aagaaggcggccggcaagtcccc 467 Query: 162 caagaag 168 ||||||| Sbjct: 468 caagaag 474
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 32 gccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccg 91 ||||||||||||||||| |||||||| || | |||||||||||| | ||||||||||| Sbjct: 332 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 391 Query: 92 aagaa 96 ||||| Sbjct: 392 aagaa 396
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| |||||||| |||||||| ||||| ||||| | |||||||||||| Sbjct: 9471303 ctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaac 9471244 Query: 77 tccgtgctgctcccgaagaag 97 | |||||||| || |||||| Sbjct: 9471243 ccggtgctgctgcccaagaag 9471223 Score = 54.0 bits (27), Expect = 4e-04 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Minus Query: 102 ccgccgccgccgagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccc 161 |||||||||||| | |||||||||||||||||| |||||||||||| |||||||| Sbjct: 9471209 ccgccgccgccg-gcaaggaggccaagtcgccc----aagaaggccgccgggaagtcccc 9471155 Query: 162 caagaag 168 ||||||| Sbjct: 9471154 caagaag 9471148 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 30359262 ccaagaagaaggcccccgcc 30359281 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 29416066 ccaagaagaaggcccccgcc 29416085
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| |||||||| |||||||| ||||| ||||| | |||||||||||| Sbjct: 168703 ctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaac 168644 Query: 77 tccgtgctgctcccgaagaag 97 | |||||||| || |||||| Sbjct: 168643 ccggtgctgctgcccaagaag 168623 Score = 54.0 bits (27), Expect = 4e-04 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Minus Query: 102 ccgccgccgccgagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccc 161 |||||||||||| | |||||||||||||||||| |||||||||||| |||||||| Sbjct: 168609 ccgccgccgccg-gcaaggaggccaagtcgccc----aagaaggccgccgggaagtcccc 168555 Query: 162 caagaag 168 ||||||| Sbjct: 168554 caagaag 168548
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| |||||||| |||||||| ||||| ||||| | |||||||||||| Sbjct: 9469424 ctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaac 9469365 Query: 77 tccgtgctgctcccgaagaag 97 | |||||||| || |||||| Sbjct: 9469364 ccggtgctgctgcccaagaag 9469344 Score = 54.0 bits (27), Expect = 4e-04 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Minus Query: 102 ccgccgccgccgagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccc 161 |||||||||||| | |||||||||||||||||| |||||||||||| |||||||| Sbjct: 9469330 ccgccgccgccg-gcaaggaggccaagtcgccc----aagaaggccgccgggaagtcccc 9469276 Query: 162 caagaag 168 ||||||| Sbjct: 9469275 caagaag 9469269 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 30450684 ccaagaagaaggcccccgcc 30450703 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 29507488 ccaagaagaaggcccccgcc 29507507
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| |||||||| |||||||| ||||| ||||| | |||||||||||| Sbjct: 17417069 ctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaac 17417128 Query: 77 tccgtgctgctcccgaagaag 97 | |||||||| || |||||| Sbjct: 17417129 ccggtgctgctgcccaagaag 17417149 Score = 54.0 bits (27), Expect = 4e-04 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Plus Query: 102 ccgccgccgccgagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccc 161 |||||||||||| | |||||||||||||||||| |||||||| ||| ||||||||| Sbjct: 17417163 ccgccgccgccg-gcaaggaggccaagtcgccc----aagaaggcggccggcaagtcccc 17417217 Query: 162 caagaag 168 ||||||| Sbjct: 17417218 caagaag 17417224 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/55 (87%), Gaps = 4/55 (7%) Strand = Plus / Plus Query: 117 aaggaggccaagtcgcccaagtaagaaggccgccacc---aagtcccccaagaag 168 ||||||||||||||||| ||| ||||| |||||||| ||||||||||||||| Sbjct: 43063410 aaggaggccaagtcgccaaag-aagaaccccgccaccgccaagtcccccaagaag 43063463 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcgccggcgtcaccatcgcc 49 ||||||||||||||||||||| Sbjct: 23243768 ctcgccggcgtcaccatcgcc 23243788
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| |||||||| |||||||| ||||| ||||| | |||||||||||| Sbjct: 70461 ctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaac 70520 Query: 77 tccgtgctgctcccgaagaag 97 | |||||||| || |||||| Sbjct: 70521 ccggtgctgctgcccaagaag 70541 Score = 54.0 bits (27), Expect = 4e-04 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Plus Query: 102 ccgccgccgccgagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccc 161 |||||||||||| | |||||||||||||||||| |||||||| ||| ||||||||| Sbjct: 70555 ccgccgccgccg-gcaaggaggccaagtcgccc----aagaaggcggccggcaagtcccc 70609 Query: 162 caagaag 168 ||||||| Sbjct: 70610 caagaag 70616
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| |||||||| |||||||| ||||| ||||| | |||||||||||| Sbjct: 409 ctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaac 468 Query: 77 tccgtgctgctcccgaagaag 97 | |||||||| || |||||| Sbjct: 469 ccggtgctgctgcccaagaag 489 Score = 54.0 bits (27), Expect = 4e-04 Identities = 58/67 (86%), Gaps = 5/67 (7%) Strand = Plus / Plus Query: 102 ccgccgccgccgagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccc 161 |||||||||||| | |||||||||||||||||| |||||||||||| |||||||| Sbjct: 503 ccgccgccgccg-gcaaggaggccaagtcgccc----aagaaggccgccgggaagtcccc 557 Query: 162 caagaag 168 ||||||| Sbjct: 558 caagaag 564
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 32 gccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccg 91 ||||||||||||||||| |||||||| || | |||||||||||| | ||||||||||| Sbjct: 403 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 462 Query: 92 aagaa 96 ||||| Sbjct: 463 aagaa 467
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 26 ctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 ||||||| || ||||||||||||| ||||||||||||| ||||||||| Sbjct: 292 ctgctcggcgccgtcaccatcgccaacggcggcgtcatgcccaacatc 339
>gb|AY849374.1| Emiliania huxleyi histone H2A mRNA, complete cds Length = 680 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 29 ctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctc 88 |||| |||||| ||| |||| || ||||||||| ||||||||||| |||| ||||| || Sbjct: 286 ctcggcggcgtgaccgtcgcgcagggcggcgtcctccccaacatccactcggtgctcctg 345 Query: 89 ccgaagaagtcc 100 |||||||||||| Sbjct: 346 ccgaagaagtcc 357
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 26 ctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 ||||||| || ||||||||||||| ||||||||||||| ||||||||| Sbjct: 20566448 ctgctcggcgccgtcaccatcgccaacggcggcgtcatgcccaacatc 20566495
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 26 ctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 ||||||| || ||||||||||||| ||||||||||||| ||||||||| Sbjct: 70409 ctgctcggcgccgtcaccatcgccaacggcggcgtcatgcccaacatc 70456
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 26 ctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 ||||||| || ||||||||||||| ||||||||||||| ||||||||| Sbjct: 40820 ctgctcggcgccgtcaccatcgccaacggcggcgtcatgcccaacatc 40867
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 23 aggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtg 82 |||||||| ||||||| |||||||||||||||||||| | |||||||||||| | || Sbjct: 376 aggctgctgaccggcgtgaccatcgcccacggcggcgtgttgcccaacatcaacccggtc 435 Query: 83 ctgctcccgaagaag 97 ||||| || |||||| Sbjct: 436 ctgctgcccaagaag 450 Score = 44.1 bits (22), Expect = 0.37 Identities = 48/56 (85%), Gaps = 7/56 (12%) Strand = Plus / Plus Query: 113 gagnaaggaggccaagtcgcccaagtaagaaggccgccaccaagtcccccaagaag 168 ||| ||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 477 gagcaaggaggccaagtcgcccaag----aaggccgcca---agtcccccaagaag 525
>gb|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds Length = 2396 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| | ||| |||||||||||||| ||||||||| | ||||||||| | ||||||| Sbjct: 1512 gctgctgggcggagtcaccatcgcccagggcggcgtcctgcccaacatccaggccgtgct 1571 Query: 85 gctcccgaagaag 97 ||| || |||||| Sbjct: 1572 gctgcccaagaag 1584
>gb|AF255739.1|AF255739 Bufo bufo gagarizans replication-dependent histone H2A gene, complete cds Length = 2120 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| | |||||||||||||||||| || |||||| | ||||||||| | ||||||| Sbjct: 1093 gctgctgggcggcgtcaccatcgcccagggaggcgtcctgcccaacatccaggccgtgct 1152 Query: 85 gctcccgaagaag 97 ||| || |||||| Sbjct: 1153 gctgcccaagaag 1165
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||| ||||| |||||||||| |||||||||||| ||||||||| Sbjct: 14468597 gctgctcggcggcgccaccatcgccagcggcggcgtcatgcccaacatc 14468549 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 21 gcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||| || ||||||||||||| ||||||||| | ||||||||| Sbjct: 20924509 gcaggctgctcggcgccgtcaccatcgccgccggcggcgtgctgcccaacatc 20924457
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full insert sequence Length = 824 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||| ||||| |||||||||| |||||||||||| ||||||||| Sbjct: 406 gctgctcggcggcgccaccatcgccagcggcggcgtcatgcccaacatc 454
>dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A01, full insert sequence Length = 733 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||| ||||| |||||||||| |||||||||||| ||||||||| Sbjct: 405 gctgctcggcggcgccaccatcgccagcggcggcgtcatgcccaacatc 453
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||| ||||| |||||||||| |||||||||||| ||||||||| Sbjct: 14422881 gctgctcggcggcgccaccatcgccagcggcggcgtcatgcccaacatc 14422833 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 21 gcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||| || ||||||||||||| ||||||||| | ||||||||| Sbjct: 20850723 gcaggctgctcggcgccgtcaccatcgccgccggcggcgtgctgcccaacatc 20850671
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||| ||||| |||||||||| |||||||||||| ||||||||| Sbjct: 48695 gctgctcggcggcgccaccatcgccagcggcggcgtcatgcccaacatc 48743
>ref|XM_865148.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC613926), mRNA Length = 393 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| || ||||||||| | ||||||||| | ||||||||||||| |||||| Sbjct: 301 gtcaccatcgctcagggcggcgtcctgcccaacatccaggccgtgctgctccctaagaag 360
>dbj|AB168678.1| Macaca fascicularis testis cDNA clone: QtsA-14092, similar to human histone 2, H2aa (HIST2H2AA), mRNA, RefSeq: NM_003516.2 Length = 778 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | ||||||||||||| |||||| Sbjct: 500 gtcaccatcgcccagggcggcgtcctgcctaacatccaggccgtgctgctccctaagaag 559
>gb|BC106331.1| Xenopus laevis cDNA clone MGC:130860 IMAGE:7205580, complete cds Length = 799 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaa 96 |||||||||||||| ||||| ||| | ||||||||| | || ||||||||||| ||||| Sbjct: 313 gtcaccatcgcccagggcggtgtcctgcccaacatccagtctgtgctgctccccaagaa 371
>emb|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 Length = 8592 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaa 96 |||||||||||||| ||||| ||| | ||||||||| | || ||||||||||| ||||| Sbjct: 4672 gtcaccatcgcccagggcggtgtcctgcccaacatccagtctgtgctgctccccaagaa 4730
>gb|AY849373.1| Emiliania huxleyi histone H2A.X mRNA, complete cds Length = 613 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 29 ctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctc 88 |||| |||||||||||| ||| ||||||||| ||||||||||| |||| ||||| || Sbjct: 289 ctcggcggcgtcaccattgcctcgggcggcgtcctccccaacatccactcggtgctcctg 348 Query: 89 ccgaagaagtc 99 || |||||||| Sbjct: 349 cccaagaagtc 359
>emb|AJ494852.1|ODI494852 Oikopleura dioica partial H2A.4 gene for histone H2A.4 Length = 2003 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaac 76 |||||||||||||| || |||||| |||||||||||||| Sbjct: 1452 gtcaccatcgcccagggtggcgtcctccccaacatcaac 1490
>gb|M21287.1|XELHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3 Length = 8608 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaa 96 |||||||||||||| ||||| ||| | ||||||||| | || ||||||||||| ||||| Sbjct: 4689 gtcaccatcgcccagggcggtgtcctgcccaacatccagtctgtgctgctccccaagaa 4747
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full insert sequence Length = 747 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 21 gcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||| || ||||||||||||| ||||||||| | ||||||||| Sbjct: 403 gcaggctgctcggcgccgtcaccatcgccgccggcggcgtgctgcccaacatc 455
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 21 gcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||| || ||||||||||||| ||||||||| | ||||||||| Sbjct: 9999 gcaggctgctcggcgccgtcaccatcgccgccggcggcgtgctgcccaacatc 9947
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 21 gcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||| || ||||||||||||| ||||||||| | ||||||||| Sbjct: 34486 gcaggctgctcggcgccgtcaccatcgccgccggcggcgtgctgcccaacatc 34538
>ref|XM_513764.1| PREDICTED: Pan troglodytes LOC457261 (LOC457261), mRNA Length = 789 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 706 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 765
>gb|BC019308.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:4205 IMAGE:2823572), complete cds Length = 567 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 339 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 398
>gb|BC001629.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:2238 IMAGE:3536984), complete cds Length = 567 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 339 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 398
>ref|XM_871500.1| PREDICTED: Bos taurus similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC619178), mRNA Length = 487 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| |||||||| | ||||| ||| | ||||| |||||||||||||| Sbjct: 324 gtcaccatcgcccagggcggcgttttgcccaatatccaggccgtgttgctcccgaagaag 383
>ref|XM_614586.2| PREDICTED: Bos taurus similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC541108), mRNA Length = 508 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| |||||||| | ||||| ||| | ||||| |||||||||||||| Sbjct: 345 gtcaccatcgcccagggcggcgttttgcccaatatccaggccgtgttgctcccgaagaag 404
>ref|XM_866756.1| PREDICTED: Bos taurus similar to H3 histone, family 2 isoform 2 (LOC615056), mRNA Length = 1029 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| |||||||| | ||||| ||| | ||||| |||||||||||||| Sbjct: 148 gtcaccatcgcccagggcggcgttttgcccaatatccaggccgtgttgctcccgaagaag 207
>ref|XM_591391.2| PREDICTED: Bos taurus similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC513666), mRNA Length = 563 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| |||||||| | ||||| ||| | ||||| |||||||||||||| Sbjct: 348 gtcaccatcgcccagggcggcgttttgcccaatatccaggccgtgttgctcccgaagaag 407
>ref|NM_003516.2| Homo sapiens histone 2, H2aa (HIST2H2AA), mRNA Length = 534 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 354 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 413
>ref|XM_545421.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC488299), mRNA Length = 387 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| || ||||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 301 gtcaccatcgcgcagggcggcgtcttgcccaacatccaggccgtgctgctgcccaagaag 360
>ref|XM_545419.2| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC488297), mRNA Length = 393 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| || ||||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 301 gtcaccatcgcgcagggcggcgtcttgcccaacatccaggccgtgctgctgcccaagaag 360
>ref|XM_543796.2| PREDICTED: Canis familiaris similar to H2A histone family, member J isoform 2 (LOC486669), mRNA Length = 598 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| || ||||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 379 gtcaccatcgcgcagggcggcgtcctgcccaacatccaggccgtgctgctgcccaagaag 438
>ref|XM_540292.2| PREDICTED: Canis familiaris similar to histone 2, H2ac (LOC483174), mRNA Length = 485 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||||| ||||||||| | ||||||||| Sbjct: 358 gtcaccatcgcccagggcggcgtcctgcccaacatc 393
>ref|XM_845715.1| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC608631), mRNA Length = 534 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||||| ||||||||| | ||||||||| Sbjct: 336 gtcaccatcgcccagggcggcgtcctgcccaacatc 371
>ref|XM_540286.2| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC483168), mRNA Length = 534 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||||| ||||||||| | ||||||||| Sbjct: 336 gtcaccatcgcccagggcggcgtcctgcccaacatc 371
>emb|AL591493.14| Human DNA sequence from clone RP11-196G18 on chromosome 1 Contains a ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (UBE2D1) pseudogene, the FCGR1A gene for Fc fragment of IgG, high affinity Ia, receptor for (CD64), a novel gene similar to histone 2, H2be (HIST2H2BE), a novel gene similar to histone 2, H3c (HIST2H3C), the HIST2H4 gene for histone 2, H4, the HIST2H3C gene for histone 2, H3c, the HIST2H2AA gene for histone 2, H2aa, a histone 2, H2bd pseudogene (HIST2H2BD), a histone 2, H2bc pseudogene (HIST2H2BC), a novel gene similar to histone 2, H2aa (HIST2H2AA), a novel gene similar to histone 2, H3c (HIST2H3C), a novel gene similar to histone 1, H4 (HIST2H4), the HIST2H2BE gene for histone 2, H2be, the HIST2H2AC gene for histone 2, H2ac, the HIST2H2AB gene for histone 2, H2ab, a novel protein similar to histone 2, a novel gene, the SV2A gene for synaptic vesicle glycoprotein 2A, the 3' end of the SF3B4 gene for splicing factor 3b, subunit 4, 49kDa and five CpG islands, complete sequence Length = 188956 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 113141 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 113200 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 104125 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 104066
>ref|XM_785005.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31618-PA (LOC585168), mRNA Length = 381 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||||| || |||||| ||||||||||| Sbjct: 301 gtcaccatcgcccagggtggcgtcctccccaacatc 336
>ref|XM_928387.1| PREDICTED: Homo sapiens similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC653610), mRNA Length = 962 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 508 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 567
>emb|CR541872.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0133D for gene HIST2H2AA, histone 2, H2aa; complete cds, without stopcodon Length = 390 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 301 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 360
>emb|CR536525.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0422D for gene HIST2H2AA, histone 2, H2aa; complete cds, incl. stopcodon Length = 393 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 301 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 360
>gb|AY894055.1| Synthetic construct Homo sapiens clone FLH131281.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 301 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 360
>gb|AY894054.1| Synthetic construct Homo sapiens clone FLH130836.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 301 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 360
>gb|BC098171.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120084 IMAGE:40021706), complete cds Length = 480 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 301 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 360
>gb|BC096705.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120083 IMAGE:40021705), complete cds Length = 480 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 301 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 360
>gb|BC096739.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120085 IMAGE:40021707), complete cds Length = 480 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 301 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 360
>gb|L19779.1|HUMH2A2A Homo sapiens histone H2A.2 mRNA, complete cds Length = 564 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 354 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 413
>gb|AY131971.1| Homo sapiens histone H2A (HIST2H2AA) gene, complete cds Length = 1173 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 |||||||||||||| ||||||||| | || |||||| | |||| |||||||| |||||| Sbjct: 692 gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag 751
>gb|BC068823.1| Xenopus laevis cDNA clone IMAGE:6635737, partial cds Length = 763 Score = 46.1 bits (23), Expect = 0.093 Identities = 50/59 (84%) Strand = Plus / Minus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaa 96 |||||||||||||| ||||| || | ||||||||| | || ||||||||||| ||||| Sbjct: 348 gtcaccatcgcccagggcggggttctgcccaacatccagtctgtgctgctccccaagaa 290
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 21 gcaggctgctcgccggcgtcaccatcg 47 |||||||||| |||||||||||||||| Sbjct: 765537 gcaggctgcttgccggcgtcaccatcg 765511
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Plus Query: 150 caccaagtcccccaagaagaaggcccccgcc 180 ||||||||||| ||||||||||||| ||||| Sbjct: 410873 caccaagtcccgcaagaagaaggccgccgcc 410903 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 19754361 ccaagaagaaggcccccgcc 19754380 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 13456030 ccaagaagaaggcccccgcc 13456011 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 11326953 ccaagaagaaggcccccgcc 11326972 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 11136608 ccaagaagaaggcccccgcc 11136627
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Plus Query: 150 caccaagtcccccaagaagaaggcccccgcc 180 ||||||||||| ||||||||||||| ||||| Sbjct: 139657 caccaagtcccgcaagaagaaggccgccgcc 139687
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017C12 Length = 135356 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Plus Query: 150 caccaagtcccccaagaagaaggcccccgcc 180 ||||||||||| ||||||||||||| ||||| Sbjct: 7114 caccaagtcccgcaagaagaaggccgccgcc 7144
>gb|AF527615.1| Zea mays histone H1-like protein HON101 (hon101) mRNA, complete cds Length = 780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ccgaagaagtcccccgccgcc 109 ||||||||||||||||||||| Sbjct: 585 ccgaagaagtcccccgccgcc 605
>ref|NM_192602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1980 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcgccggcgtcaccatcgcc 49 ||||||||||||||||||||| Sbjct: 262 ctcgccggcgtcaccatcgcc 282
>gb|BT017719.1| Zea mays clone EL01N0447A04.c mRNA sequence Length = 772 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Plus Query: 17 ctcggcaggctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaac 76 ||||||| |||||| | || ||||||||||| |||||||| || | |||||||| ||| Sbjct: 369 ctcggcaagctgctgggtggggtcaccatcgcgcacggcggtgtgctgcccaacattaac 428 Query: 77 tccgtgctgctcccgaagaag 97 |||| || ||||| |||||| Sbjct: 429 cccgtcctcctccccaagaag 449
>emb|CT025304.2| Xenopus tropicalis finished cDNA, clone TNeu074k04 Length = 550 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 44 atcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaa 96 ||||| || ||||| ||| | ||||||||| | |||||||||||||| ||||| Sbjct: 321 atcgctcagggcggtgtcctgcccaacatccagtccgtgctgctccctaagaa 373
>emb|CR709561.2|CNS0GAG5 Tetraodon nigroviridis full-length cDNA Length = 613 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 29 ctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||| |||||||||||||||||| || ||||| | ||||||||| Sbjct: 345 ctcggcggcgtcaccatcgcccaggggggcgttttacccaacatc 389
>emb|CR705345.2|CNS0G771 Tetraodon nigroviridis full-length cDNA Length = 1250 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 29 ctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatc 73 |||| |||||||||||||||||| || ||||| | ||||||||| Sbjct: 346 ctcggcggcgtcaccatcgcccaggggggcgttttacccaacatc 390
>emb|AL138933.18| Human DNA sequence from clone RP4-667F15 on chromosome 1p12-13.3 Contains the 5' end of a novel gene and the 5' end of the gene for maba1 (KIAA1324), complete sequence Length = 45857 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ccgccaccaagtcccccaagaagaa 170 ||||||||||| ||||||||||||| Sbjct: 26672 ccgccaccaagacccccaagaagaa 26696
>emb|BX063165.1|CNS09KWH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC44DD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 902 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 580 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 524
>emb|BX063164.1|CNS09KWG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44DD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 924 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 421 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 477
>emb|BX040864.1|CNS093P0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC11DG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 414 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 470
>emb|BX019683.1|CNS08NCN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3AB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 651 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 425 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 481
>emb|BX016452.1|CNS08KUW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24CG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 594 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 130 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 74
>emb|BX016451.1|CNS08KUV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA24CG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 556 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 348 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 404
>emb|BX009846.1|CNS08FRE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15DF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 357 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 173 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 117
>emb|BX008487.1|CNS08EPN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13DG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 408 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 175 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 231
>gb|AY940501.1| Uncultured bacterium clone QLS0-B14 16S ribosomal RNA gene, partial sequence Length = 664 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gctcccgaagaagtcccccgc 105 ||||||||||||||||||||| Sbjct: 148 gctcccgaagaagtcccccgc 128
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gccaccaagtcccccaagaag 168 ||||||||||||||||||||| Sbjct: 7508512 gccaccaagtcccccaagaag 7508532 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| || |||||||||||||| || || || || | || ||||||||| | ||||| Sbjct: 7508402 gctgctggctggcgtcaccatcgcgcatggtggtgtgctgccgaacatcaacccggtgct 7508461 Query: 85 gctcccgaa 93 ||||||||| Sbjct: 7508462 gctcccgaa 7508470 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 32130737 ccaagaagaaggcccccgcc 32130756
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/55 (87%), Gaps = 4/55 (7%) Strand = Plus / Plus Query: 117 aaggaggccaagtcgcccaagtaagaaggccgccacc---aagtcccccaagaag 168 ||||||||||||||||| ||| ||||| |||||||| ||||||||||||||| Sbjct: 60439 aaggaggccaagtcgccaaag-aagaaccccgccaccgccaagtcccccaagaag 60492
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcgccggcgtcaccatcgcc 49 ||||||||||||||||||||| Sbjct: 30510 ctcgccggcgtcaccatcgcc 30530
>ref|XM_551996.1| Anopheles gambiae str. PEST ENSANGP00000029020 (ENSANGG00000023190), partial mRNA Length = 297 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 223 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 279
>ref|XM_314447.2| Anopheles gambiae str. PEST ENSANGP00000016040 (ENSANGG00000013551), partial mRNA Length = 375 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 301 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 357
>ref|XM_306256.1| Anopheles gambiae str. PEST ENSANGP00000000004 (ENSANGG00000000004), mRNA Length = 630 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 41 accatcgcccacggcggcgtcatccccaacatcaactccgtgctgctcccgaagaag 97 ||||||||||| |||||||| | ||||||||| | |||||||||| || |||||| Sbjct: 415 accatcgcccagggcggcgtgctgcccaacatccaggccgtgctgctgcccaagaag 471
>gb|AY104249.1| Zea mays PCO063043 mRNA sequence Length = 942 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ccgaagaagtcccccgccgcc 109 ||||||||||||||||||||| Sbjct: 599 ccgaagaagtcccccgccgcc 619
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gccaccaagtcccccaagaag 168 ||||||||||||||||||||| Sbjct: 30985 gccaccaagtcccccaagaag 31005 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgct 84 |||||| || |||||||||||||| || || || || | || ||||||||| | ||||| Sbjct: 30875 gctgctggctggcgtcaccatcgcgcatggtggtgtgctgccgaacatcaacccggtgct 30934 Query: 85 gctcccgaa 93 ||||||||| Sbjct: 30935 gctcccgaa 30943
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctcggcaggctgctcgccggcgtc 40 ||||||||||||| |||||||||| Sbjct: 384725 ctcggcaggctgcacgccggcgtc 384702
>ref|NM_195182.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor (OSJNBa0095J15.9), mRNA Length = 3246 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 1019 ccaagaagaaggcccccgcc 1038
>ref|NM_196532.1| Oryza sativa (japonica cultivar-group) Similar to sulfate transporter (ATST1) (OSJNBa0053G13.6), mRNA Length = 1977 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcgccggcgtcaccatcgcc 49 |||||||||||||||||||| Sbjct: 257 tcgccggcgtcaccatcgcc 276
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aggctgctcgccggcgtcac 42 |||||||||||||||||||| Sbjct: 1823900 aggctgctcgccggcgtcac 1823919
>gb|AC135956.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005H20, complete sequence Length = 135560 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 69904 ccaagaagaaggcccccgcc 69885
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 144214 ccaagaagaaggcccccgcc 144195
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 35641 ccaagaagaaggcccccgcc 35622
>ref|XM_957759.1| Neurospora crassa OR74A hypothetical protein (NCU07618.1) partial mRNA Length = 5403 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccaagtcccccaagaagaag 171 |||||||||||||||||||| Sbjct: 2330 ccaagtcccccaagaagaag 2349
>ref|XM_868674.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC616611), mRNA Length = 393 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 ||||||||||| || ||||||||| | ||||||||| Sbjct: 301 gtcaccatcgctcagggcggcgtcctgcccaacatc 336
>ref|XM_328323.1| Neurospora crassa OR74A hypothetical protein (NCU07618.1) partial mRNA Length = 5403 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccaagtcccccaagaagaag 171 |||||||||||||||||||| Sbjct: 2330 ccaagtcccccaagaagaag 2349
>ref|XM_906200.1| PREDICTED: Mus musculus similar to histone H2A (LOC621893), mRNA Length = 393 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaa 69 |||||||||||||| ||||| ||| ||||||| Sbjct: 301 gtcaccatcgcccagggcggggtcctccccaa 332
>ref|XM_886305.1| PREDICTED: Mus musculus similar to histone H2A (LOC621893), mRNA Length = 393 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaa 69 |||||||||||||| ||||| ||| ||||||| Sbjct: 301 gtcaccatcgcccagggcggggtcctccccaa 332
>gb|AY245686.1| Aotus nancymaae clone 4-c2A T-cell receptor gamma variable region mRNA, partial cds Length = 404 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 115 tgtatctggtattttctaca 96
>gb|AY245685.1| Aotus nancymaae clone 4-c1A T-cell receptor gamma variable region mRNA, partial cds Length = 407 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 115 tgtatctggtattttctaca 96
>gb|AY245684.1| Aotus nancymaae clone 3-c1A T-cell receptor gamma variable region mRNA, partial cds Length = 398 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 115 tgtatctggtattttctaca 96
>gb|AY245683.1| Aotus nancymaae clone 2-c3A T-cell receptor gamma variable region mRNA, partial cds Length = 386 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 115 tgtatctggtattttctaca 96
>gb|AY245682.1| Aotus nancymaae clone 1-c5A T-cell receptor gamma variable region mRNA, partial cds Length = 407 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 115 tgtatctggtattttctaca 96
>gb|AY245681.1| Aotus nancymaae clone 1-c4A T-cell receptor gamma variable region mRNA, partial cds Length = 404 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 115 tgtatctggtattttctaca 96
>gb|AY245678.1| Aotus nancymaae clone 8 T-cell receptor gamma variable region gene, partial cds Length = 309 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 220 tgtatctggtattttctaca 201
>gb|AY245677.1| Aotus nancymaae clone 81a-C T-cell receptor gamma variable region gene, partial cds Length = 364 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 220 tgtatctggtattttctaca 201
>gb|AY245675.1| Aotus nancymaae clone 6-C7 T-cell receptor gamma variable region gene, partial cds Length = 364 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 220 tgtatctggtattttctaca 201
>gb|AY158922.2| Mus musculus histone protein Hist2h2ab gene, complete cds Length = 1680 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 38 gtcaccatcgcccacggcggcgtcatccccaa 69 |||||||||||||| ||||| ||| ||||||| Sbjct: 837 gtcaccatcgcccagggcggggtcctccccaa 806
>gb|AY341245.1| Homo sapiens chromosome condensation 1-like (CHC1L) gene, complete cds Length = 37676 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 acattgtatctggtattttctaca 331 ||||| |||||||||||||||||| Sbjct: 2717 acattttatctggtattttctaca 2694
>emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chromosome 13 Contains the CHC1L gene for chromosome condensation 1-like, 3 novel genes and a CpG island, complete sequence Length = 114519 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 acattgtatctggtattttctaca 331 ||||| |||||||||||||||||| Sbjct: 34401 acattttatctggtattttctaca 34424
>emb|X61748.1|SMTBPB S.mytilis telomere-binding protein gene (beta subunit) for Sty43 Length = 1738 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 aagaaggccgccaccaagtc 158 |||||||||||||||||||| Sbjct: 1003 aagaaggccgccaccaagtc 1022
>emb|X06642.1|SPH2BAL3 Strongylocentrotus purpuratus late histone genes L3 H2b - H2a Length = 1980 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||||| || || ||| ||||||||||| Sbjct: 1461 gtcaccatcgcccaaggtggtgtcctccccaacatc 1496
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 gctgctcgccggcgtcaccatcgc 48 ||||||||||||||||| |||||| Sbjct: 196054 gctgctcgccggcgtcatcatcgc 196077
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 26426 ccaagaagaaggcccccgcc 26445
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cccccaagaagaaggcccccgcca 181 ||||||||||| |||||||||||| Sbjct: 123928 cccccaagaagcaggcccccgcca 123951
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 117753 ccaagaagaaggcccccgcc 117734
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ctcatggactaagatgagat 251 |||||||||||||||||||| Sbjct: 903133 ctcatggactaagatgagat 903152
>gb|AF333710.1| Aotus nancymaae clone 2 T-cell receptor gamma chain V region mRNA, partial cds Length = 295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|AF333709.1| Aotus nancymaae clone 1 T-cell receptor gamma chain V region mRNA, partial cds Length = 295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|U63576.1|SMU63576 Stylonychia mytilus SM7 micronuclear telomere-binding protein beta subunit, partial cds Length = 1106 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 aagaaggccgccaccaagtc 158 |||||||||||||||||||| Sbjct: 375 aagaaggccgccaccaagtc 394
>gb|AF378750.1|AF378750 Aotus nancymaae clone 61-16 T-cell receptor gamma chain V-J region mRNA, partial cds Length = 367 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|AF378749.1|AF378749 Aotus nancymaae clone 61-13 T-cell receptor gamma chain V-J region mRNA, partial cds Length = 358 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|AF378748.1|AF378748 Aotus nancymaae clone 61-8 T-cell receptor gamma chain V-J region mRNA, partial cds Length = 352 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|AF378747.1|AF378747 Aotus nancymaae clone S61-6 T-cell receptor gamma chain V-J region mRNA, partial cds Length = 358 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|AF378746.1|AF378746 Aotus nancymaae clone S61-3 T-cell receptor gamma chain V-J region mRNA, partial cds Length = 367 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|AF378745.1|AF378745 Aotus nancymaae clone S61-1 T-cell receptor gamma chain V-J region mRNA, partial cds Length = 361 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgtatctggtattttctaca 331 |||||||||||||||||||| Sbjct: 97 tgtatctggtattttctaca 78
>gb|U62673.1|MMU62673 Mus musculus histone H2a(A)-613, histone H2a(B)-613, and histone H2b-613 (H2b) genes, complete cds Length = 2618 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaa 69 |||||||||||||| ||||| ||| ||||||| Sbjct: 964 gtcaccatcgcccagggcggggtcctccccaa 995
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcgccggcgtcaccatcgcc 49 |||||||||||||||||||| Sbjct: 14281937 tcgccggcgtcaccatcgcc 14281956 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 5272443 ccaagaagaaggcccccgcc 5272424
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 22529106 ccaagaagaaggcccccgcc 22529125
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 29547663 ccaagaagaaggcccccgcc 29547682
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcgccggcgtcaccatcgcc 49 |||||||||||||||||||| Sbjct: 29212 tcgccggcgtcaccatcgcc 29231
>gb|AE004475.1| Pseudomonas aeruginosa PAO1, section 36 of 529 of the complete genome Length = 10859 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcggcaggctgctcgccggc 37 |||||||||||||||||||| Sbjct: 3867 tcggcaggctgctcgccggc 3848
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 1284888 ccaagaagaaggcccccgcc 1284869
>gb|AY158923.1| Mus musculus histone protein Hist2h2ac gene, complete cds Length = 1200 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 38 gtcaccatcgcccacggcggcgtcatccccaa 69 |||||||||||||| ||||| ||| ||||||| Sbjct: 937 gtcaccatcgcccagggcggggtcctccccaa 906
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 44307 ccaagaagaaggcccccgcc 44326
>ref|NM_214553.1| Strongylocentrotus purpuratus late histone L3 H2a (LOC373348), mRNA Length = 381 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||||| || || ||| ||||||||||| Sbjct: 301 gtcaccatcgcccaaggtggtgtcctccccaacatc 336
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 62912 ccaagaagaaggcccccgcc 62931
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 74335 ccaagaagaaggcccccgcc 74354
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 111119 ccaagaagaaggcccccgcc 111138
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073G17 Length = 162391 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 129768 ccaagaagaaggcccccgcc 129787
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 119302 ccaagaagaaggcccccgcc 119321
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 55787 ccaagaagaaggcccccgcc 55806
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 41959 ccaagaagaaggcccccgcc 41940
>ref|XM_321546.2| Anopheles gambiae str. PEST ENSANGP00000018140 (ENSANGG00000015651), partial mRNA Length = 1198 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cccccaagaagaaggcccccgcca 181 ||||||||||| |||||||||||| Sbjct: 372 cccccaagaagcaggcccccgcca 395
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcaccatcgcccacggcggc 58 |||||||||||||||||||| Sbjct: 2600568 tcaccatcgcccacggcggc 2600587
>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence Length = 200326 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaa 69 |||||||||||||| ||||| ||| ||||||| Sbjct: 44855 gtcaccatcgcccagggcggggtcctccccaa 44886
>emb|CT025654.11| Mouse DNA sequence from clone RP24-345F16 on chromosome 12, complete sequence Length = 183766 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 acaggaatggtgaaagatgc 350 |||||||||||||||||||| Sbjct: 149583 acaggaatggtgaaagatgc 149564
>dbj|AK112569.1| Ciona intestinalis cDNA, clone:cicl055h19, full insert sequence Length = 1907 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaggagtaactgctcccata 203 |||||||||||||||||||| Sbjct: 697 aaggagtaactgctcccata 678
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tcgccggcgtcaccatcgcc 49 |||||||||||||||||||| Sbjct: 14290179 tcgccggcgtcaccatcgcc 14290198 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccaagaagaaggcccccgcc 180 |||||||||||||||||||| Sbjct: 5273230 ccaagaagaaggcccccgcc 5273211
>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence Length = 166720 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 38 gtcaccatcgcccacggcggcgtcatccccaa 69 |||||||||||||| ||||| ||| ||||||| Sbjct: 55838 gtcaccatcgcccagggcggggtcctccccaa 55807
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 aggaggccaagtcgcccaagtaag 141 ||||||||||||||||||| |||| Sbjct: 1643801 aggaggccaagtcgcccaaataag 1643824
>gb|M13637.1|SULHIS2A Sea urchin (L.pictus) testis histone H2a mRNA Length = 366 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 38 gtcaccatcgcccacggcggcgtcatccccaacatc 73 |||||||||||||| || || ||| ||||||||||| Sbjct: 259 gtcaccatcgcccaaggtggtgtcctccccaacatc 294 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,454,787 Number of Sequences: 3902068 Number of extensions: 3454787 Number of successful extensions: 70402 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 184 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 67988 Number of HSP's gapped (non-prelim): 2389 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
