ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7n08 |
|---|---|
| Clone Library Name | barley_pub |
>POLC1_TOBAC (Q8VWY6) Polcalcin Nic t 1 (Calcium-binding pollen allergen Nic t| 1) Length = 84 Score = 35.0 bits (79), Expect = 0.16 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%) Frame = +2 Query: 212 FMKFEKDDSGRI--AILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYI---R 376 F +F+ + G+I A L L ++ +V+ + + M+ELD D DGF+ E E + R Sbjct: 15 FKRFDLNGDGKISSAELGETLKMLGSVTSEEVQHMMAELDTDGDGFISYEEFEEFARANR 74 Query: 377 GLIPNLAQL 403 GLI ++A++ Sbjct: 75 GLIKDVAKV 83
>DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hDaxx) (Fas| death domain-associated protein) (ETS1-associated protein 1) (EAP1) Length = 740 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 266 LYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPS 418 LYV L + +D+SELD+ +LQ ++ + L L +L+D S Sbjct: 197 LYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGRLCELKDCSS 247
>DAXX_MOUSE (O35613) Death domain-associated protein 6 (Daxx)| Length = 739 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 266 LYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPS 418 LYV L + +D+SELD+ +LQ ++ + L L +L+D S Sbjct: 203 LYVAEIRRLQEKELDLSELDDPDSSYLQEARLKRKLIRLFGRLCELKDCSS 253
>SYT2_AERPE (Q9YFY3) Probable threonyl-tRNA synthetase 2 (EC 6.1.1.3)| (Threonine--tRNA ligase 2) (ThrRS 2) Length = 406 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -3 Query: 379 SSDVCFHFMRLKETIRILIKFTHINSCLSKRNCSHNIKIE 260 +SD+ H RLK T IL + H++S L+K +H IE Sbjct: 40 ASDIASHSSRLKVTTVILYPYAHLSSRLAKPMAAHKRLIE 79
>DAXX_RAT (Q8VIB2) Death domain-associated protein 6 (Daxx)| Length = 731 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +2 Query: 266 LYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPS 418 LYV L + +D+SELD+ +LQ ++ + L L L+D S Sbjct: 195 LYVAEIQRLQEKELDLSELDDPDSSYLQEARLKRKLIRLFGRLCDLKDCSS 245
>CETN2_MOUSE (Q9R1K9) Centrin-2 (Caltractin isoform 1)| Length = 172 Score = 31.2 bits (69), Expect = 2.4 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%) Frame = +2 Query: 104 DATGAEKMNYEDFCHIATVCTEQIGQKCKRFFSPSNFMKFEKDDSGRIAILPFYLYVMRT 283 D G KMN+ DF TV T+++ +K + F F+ D++G+I+ Sbjct: 77 DKEGTGKMNFSDF---LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL 133 Query: 284 -VSLTQARID--MSELDEDSDGFLQPHE 358 +LT + + E D D DG + E Sbjct: 134 GENLTDEELQEMIDEADRDGDGEVNEQE 161
>DAXX_CERAE (O18805) Death domain-associated protein 6 (Daxx)| Length = 736 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 266 LYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPS 418 LYV L + +D+SELD+ +LQ ++ + L L +L+D S Sbjct: 197 LYVAEIRRLQERELDLSELDDPDSTYLQEARLKRKLIRLFGRLCELKDCSS 247
>DAXX_CANFA (Q5TJE1) Death domain-associated protein 6 (Daxx)| Length = 737 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 266 LYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPS 418 LYV L + +D+SELD+ +LQ ++ + L L +L+D S Sbjct: 196 LYVAEIRRLQEKELDLSELDDPDSTYLQEARLKRKLIRLFGRLCELKDCSS 246
>POLC3_SYRVU (P58171) Polcalcin Syr v 3 (Calcium-binding pollen allergen Syr v| 3) Length = 81 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 5/69 (7%) Frame = +2 Query: 212 FMKFEKDDSGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIR--- 376 F +F+ + G+I+ L L + +V+ + + M+E+D D DGF+ E + + R Sbjct: 12 FKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGFISFEEFKDFARANS 71 Query: 377 GLIPNLAQL 403 GLI ++A++ Sbjct: 72 GLIKDVAKI 80
>CETN3_MOUSE (O35648) Centrin-3| Length = 167 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Frame = +2 Query: 104 DATGAEKMNYEDFCHIATVCTEQIGQKCKRFFSPSNFMKFEKDDSGRIAILPFYLYVMR- 280 +ATG K+ +EDF + T + I ++ F F+ DDSG+I++ Sbjct: 76 EATG--KITFEDFNEVVT---DWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVAREL 130 Query: 281 --TVSLTQARIDMSELDEDSDGFLQPHEMEAYIRG 379 +S + R + E D+D DG + E A + G Sbjct: 131 GENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTG 165
>CETN3_HUMAN (O15182) Centrin-3| Length = 167 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Frame = +2 Query: 104 DATGAEKMNYEDFCHIATVCTEQIGQKCKRFFSPSNFMKFEKDDSGRIAILPFYLYVMR- 280 +ATG K+ +EDF + T + I ++ F F+ DDSG+I++ Sbjct: 76 EATG--KITFEDFNEVVT---DWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVAREL 130 Query: 281 --TVSLTQARIDMSELDEDSDGFLQPHEMEAYIRG 379 +S + R + E D+D DG + E A + G Sbjct: 131 GENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTG 165
>POLC3_OLEEU (O81092) Polcalcin Ole e 3 (Calcium-binding pollen allergen Ole e| 3) Length = 84 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 5/69 (7%) Frame = +2 Query: 212 FMKFEKDDSGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYI---R 376 F +F+ + G+I+ L L + +V+ + + M+E+D D DGF+ E + R Sbjct: 15 FKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGFISFEEFTVFARANR 74 Query: 377 GLIPNLAQL 403 GL+ ++A++ Sbjct: 75 GLVKDVAKI 83
>POLC7_PHLPR (O82040) Polcalcin Phl p 7 (Calcium-binding pollen allergen Phl p| 7) (P7) Length = 78 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 5/69 (7%) Frame = +2 Query: 212 FMKFEKDDSGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIR--- 376 F +F+ + G+I++ L L + + S + + M+E+D D DGF+ +E ++ Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNANP 68 Query: 377 GLIPNLAQL 403 GL+ ++A++ Sbjct: 69 GLMKDVAKV 77
>POLC3_CHEAL (Q84V36) Polcalcin Che a 3 (Calcium-binding pollen allergen Che a| 3) Length = 86 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 5/69 (7%) Frame = +2 Query: 212 FMKFEKDDSGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYI---R 376 F +F+ + G+I+ L L + +V+ + R M+E+D D DGF+ E + R Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 76 Query: 377 GLIPNLAQL 403 GL+ +++++ Sbjct: 77 GLVKDVSKI 85
>7LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1)| Length = 2594 Score = 30.0 bits (66), Expect = 5.3 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 10/120 (8%) Frame = +2 Query: 116 AEKMNYEDFCHIATVCTEQIGQKCKRFFSPSNFMKFEKDDSGRIAILPFYLYVMRTVSL- 292 AE +N D H+ +C + ++ + + DD G++A P YLY +R S+ Sbjct: 1612 AETLNLVD--HLGRLCVYHVARQLCTSSALRAQLNLLNDDIGQLAQDPGYLYALRNGSVR 1669 Query: 293 -----TQARIDMSELDEDSDGFLQPHEMEAYIRG---LIP-NLAQLRDMPSAFVQMYCRI 445 Q + EL D L+ + +AY L+P A L PS+ + C + Sbjct: 1670 AYGRRRQQLEFLLELQPDEVRLLRAYNYQAYPSRRCLLLPTTAAALESTPSSCEETQCSL 1729
>POLC4_BETVE (Q39419) Polcalcin Bet v 4 (Calcium-binding pollen allergen Bet v| 4) Length = 85 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 5/69 (7%) Frame = +2 Query: 212 FMKFEKDDSGRI--AILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAY---IR 376 F +F+ + G+I A L L + +++ + + M+E+D D DGF+ E + R Sbjct: 16 FKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFTDFGRANR 75 Query: 377 GLIPNLAQL 403 GL+ ++A++ Sbjct: 76 GLLKDVAKI 84
>POLC7_CYNDA (P94092) Polcalcin Cyn d 7 (Calcium-binding pollen allergen Cyn d| 7) (Calcium-binding protein B1) Length = 80 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 5/69 (7%) Frame = +2 Query: 212 FMKFEKDDSGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIR--- 376 F +F+ + G+I++ L L + + S + + M+E+D D DGF+ E ++ Sbjct: 11 FKRFDTNGDGKISLAELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFDEFISFCNANP 70 Query: 377 GLIPNLAQL 403 GL+ ++A++ Sbjct: 71 GLMKDVAKV 79
>LEU1_GLOVI (Q7NI93) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 538 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/75 (28%), Positives = 37/75 (49%) Frame = +2 Query: 215 MKFEKDDSGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNL 394 ++F D+GR A P YLY + ++ ++ D+ G+L P E IRG+ N Sbjct: 140 VEFSPMDAGRSA--PEYLYRVLEAAIAAGATTVNI--PDTVGYLTPAEFGGLIRGITQN- 194 Query: 395 AQLRDMPSAFVQMYC 439 +R + A + ++C Sbjct: 195 --VRGIERAVISVHC 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,658,377 Number of Sequences: 219361 Number of extensions: 1501442 Number of successful extensions: 3776 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3669 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3773 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
