ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor 30 2.3
2SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor 28 5.1

>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor|
          Length = 2170

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 7    LTRATSVHMVESSCINHLGPMINNVXFRLPATTPLLQAHYHGNMSSISTLRELPDRAP 180
            L  A+  H   S  ++ L P   +  FR+ AT  +  + +     S++TL+  PD AP
Sbjct: 1447 LHSASVSHNASSFIVDRLKPF-TSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAP 1503



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>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor|
          Length = 2176

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +1

Query: 7    LTRATSVHMVESSCINHLGPMINNVXFRLPATTPLLQAHYHGNMSSISTLRELPDRAP 180
            L  A+  H   +  ++ L P   +  FR+ AT  +  + +     S++TL+  PD AP
Sbjct: 1453 LHSASVSHNASAFTVDRLKPF-TSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAP 1509


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,673,337
Number of Sequences: 219361
Number of extensions: 353238
Number of successful extensions: 762
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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