ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8c04 |
|---|---|
| Clone Library Name | barley_pub |
>SPS1_CITUN (O22060) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1057 Score = 175 bits (444), Expect = 9e-44 Identities = 84/162 (51%), Positives = 119/162 (73%), Gaps = 2/162 (1%) Frame = +2 Query: 41 KXLKGXMIFEDSEHSST-YCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLS 217 K G + +E ST YC AF V P PP+KELRK++RIQ+LRC+ +Y + +R++ Sbjct: 893 KAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRVN 952 Query: 218 VTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAAN 397 V P+ ASRSQA+RYL++RWG+EL +VV VGESGD+DYE LLGG+H+T+ILKG + ++N Sbjct: 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 1012 Query: 398 RIHTVRRYPLQDVVALDSSNIIEV-QGCTTEDIKSALRHIGV 520 +IH R YPL DV+ +DS NI++ + CTT DI+S+L +G+ Sbjct: 1013 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054
>SPS_SPIOL (P31928) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1056 Score = 171 bits (433), Expect(2) = 1e-43 Identities = 83/153 (54%), Positives = 111/153 (72%) Frame = +2 Query: 59 MIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHAS 238 ++ D S+T+C AFKV + PP KELRK+MRIQ+LRC+A+Y + TRL+V P+ AS Sbjct: 897 IVIADETSSTTHCYAFKVNDFTLAPPAKELRKMMRIQALRCHAIYCQNGTRLNVIPVLAS 956 Query: 239 RSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTVRR 418 RSQA+RYLF+RWG+EL N VV VGESGD+DYE LLGG+H+T+ILKG + +N H R Sbjct: 957 RSQALRYLFMRWGVELSNFVVFVGESGDTDYEGLLGGVHKTVILKGIGSNTSN-FHATRA 1015 Query: 419 YPLQDVVALDSSNIIEVQGCTTEDIKSALRHIG 517 YP++ V+ +DS N+ + GC +DI AL IG Sbjct: 1016 YPMEHVMPVDSPNMFQTGGCNIDDISDALSKIG 1048 Score = 25.0 bits (53), Expect(2) = 1e-43 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +3 Query: 3 LVKWATSVVEXKGXN 47 LVKWA SV E KG N Sbjct: 879 LVKWAASVNEKKGEN 893
>SPS_BETVU (P49031) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1045 Score = 172 bits (437), Expect = 6e-43 Identities = 84/148 (56%), Positives = 112/148 (75%), Gaps = 1/148 (0%) Frame = +2 Query: 59 MIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHAS 238 +I ED E S+ YC AFK+ N N +PP KELRK MRIQ+LRC+ +Y + ++++V P+ AS Sbjct: 890 VITEDEEVSTGYCFAFKIKNQNKVPPTKELRKSMRIQALRCHVIYCQNGSKMNVIPVLAS 949 Query: 239 RSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTVRR 418 RSQA+RYL+VRWG+EL +VV VGE GD+DYE LLGG+H+T+ILKG N A +H R Sbjct: 950 RSQALRYLYVRWGVELSKMVVFVGECGDTDYEGLLGGVHKTVILKGVSNTALRSLHANRS 1009 Query: 419 YPLQDVVALDSSNIIEV-QGCTTEDIKS 499 YPL VV+LDS NI EV +GC++ +I+S Sbjct: 1010 YPLSHVVSLDSPNIGEVSKGCSSSEIQS 1037
>SPS1_CRAPL (O04932) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1054 Score = 167 bits (422), Expect = 3e-41 Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 2/155 (1%) Frame = +2 Query: 59 MIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHAS 238 +I ED E S+ YC +FKV PN +PP+KE RK+MRIQ+LRC+ +Y + +++V P+ AS Sbjct: 896 VIIEDEETSADYCYSFKVQKPNVVPPVKEARKVMRIQALRCHVVYCQNGNKINVIPVLAS 955 Query: 239 RSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTVRR 418 R+QA+RYL++RWG+EL VV+VGESGD+DYEE+LGG+H+T++L G A N +H R Sbjct: 956 RAQALRYLYLRWGMELSKTVVVVGESGDTDYEEMLGGVHKTVVLSGVCTTATNLLHANRS 1015 Query: 419 YPLQDVVALDSSNIIEV--QGCTTEDIKSALRHIG 517 YPL DVV D NI + + C++ D+++ L G Sbjct: 1016 YPLADVVCFDDLNIFKTHNEECSSTDLRALLEEHG 1050
>SPS_VICFA (Q43876) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1059 Score = 163 bits (413), Expect = 3e-40 Identities = 80/146 (54%), Positives = 108/146 (73%), Gaps = 1/146 (0%) Frame = +2 Query: 83 SSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQAIRYL 262 S+ YC AF V PPLKELRKLMRIQ+LRC+ +Y + TRL+V P+ ASRSQA+RYL Sbjct: 910 STDYCYAFNVRKAGMAPPLKELRKLMRIQALRCHPIYCQNGTRLNVIPVLASRSQALRYL 969 Query: 263 FVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVA 442 +VRWG EL +VV VGE GD+DYE L+GGLH+++ILKG + A +++H R YPL DV+ Sbjct: 970 YVRWGFELSKMVVFVGECGDTDYEGLVGGLHKSVILKGVGSRAISQLHNNRNYPLSDVMP 1029 Query: 443 LDSSNIIE-VQGCTTEDIKSALRHIG 517 LDS NI++ +G ++ DI++ L +G Sbjct: 1030 LDSPNIVQATEGSSSADIQALLEKVG 1055
>SPS_SOLTU (Q43845) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1053 Score = 162 bits (411), Expect = 6e-40 Identities = 76/155 (49%), Positives = 113/155 (72%), Gaps = 1/155 (0%) Frame = +2 Query: 59 MIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHAS 238 ++ ED ++S+ YC FKV P +PP KELRK+MRIQ+LRC+A+Y + +R++V P+ AS Sbjct: 896 IVVEDEDNSADYCYTFKVCKPGTVPPSKELRKVMRIQALRCHAVYCQNGSRINVIPVLAS 955 Query: 239 RSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTVRR 418 RSQA+RYL++RWG++L +VV VGESGD+DYE L+GGL + +I+KG A++ IH R Sbjct: 956 RSQALRYLYLRWGMDLSKLVVFVGESGDTDYEGLIGGLRKAVIMKGLCTNASSLIHGNRN 1015 Query: 419 YPLQDVVALDSSNIIEV-QGCTTEDIKSALRHIGV 520 YPL DV+ DS N+I+ + C++ +I+ L + V Sbjct: 1016 YPLSDVLPFDSPNVIQADEECSSTEIRCLLEKLAV 1050
>SPS_ORYSA (Q43802) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1049 Score = 118 bits (295), Expect = 2e-26 Identities = 58/142 (40%), Positives = 93/142 (65%), Gaps = 1/142 (0%) Frame = +2 Query: 53 GXMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIH 232 G + D E + +C++F + +PN + E+R+ MR++ LRC+ +Y +ATRL V P+ Sbjct: 903 GTNVEPDVESCNPHCVSFFIKDPNKVRTADEMRERMRMRGLRCHLMYCRNATRLQVVPLL 962 Query: 233 ASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANR-IHT 409 ASRSQA+RYLFVRWG+ + N+ +IVGE GD+D+EE+L GLH+T+I++G + + + + Sbjct: 963 ASRSQALRYLFVRWGLSVGNMYLIVGEHGDTDHEEMLSGLHKTVIIRGVTEKGSEQLVRS 1022 Query: 410 VRRYPLQDVVALDSSNIIEVQG 475 Y +DV +S I +G Sbjct: 1023 SGSYQREDVFPSESPLIAFTKG 1044
>SPS_MAIZE (P31927) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1068 Score = 110 bits (276), Expect = 3e-24 Identities = 48/108 (44%), Positives = 78/108 (72%) Frame = +2 Query: 53 GXMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIH 232 G + +D S+ +C+AF + +P + + E+R+ +R++ LRC+ +Y ++TRL V P+ Sbjct: 906 GDAVEQDVASSNAHCVAFLIKDPQKVKTVDEMRERLRMRGLRCHIMYCRNSTRLQVVPLL 965 Query: 233 ASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKG 376 ASRSQA+RYL VRWG+ + N+ +I GE GD+D EE+L GLH+T+I++G Sbjct: 966 ASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 1013
>SPS2_CRAPL (O04933) Sucrose-phosphate synthase 2 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 2) Length = 1081 Score = 110 bits (274), Expect = 4e-24 Identities = 53/149 (35%), Positives = 94/149 (63%), Gaps = 2/149 (1%) Frame = +2 Query: 74 SEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQAI 253 ++ S+++CL++ + +P+ + ++R+ +R++ LRC+ +Y ++T + V P+ ASRSQA+ Sbjct: 928 AKSSNSHCLSYAIKDPSKAKKVDDMRQKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQAL 987 Query: 254 RYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANR-IHTVRRYPLQ 430 RYLFVRW + + N+ VI+GE+GD+DYEEL+ G H+T+I++G + + T Y Sbjct: 988 RYLFVRWRLSVANMYVILGETGDTDYEELISGTHKTLIMRGVVEKGSEELLRTAGSYLRD 1047 Query: 431 DVVALDSSNIIEV-QGCTTEDIKSALRHI 514 DV+ D+ I +G E I R + Sbjct: 1048 DVIPQDTPLIAYADKGAKAEHIVETFRQL 1076
>NS1_IADE1 (P08272) Nonstructural protein 1 (NS1) (NS1A) (Fragment)| Length = 227 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = +2 Query: 350 LHRTIILKGDFNIAANRIHT---VRRYPLQDVVALDSSNIIEVQGCTTEDIKSAL 505 + + IILK +F++ NR+ T +R + + + + S + + G T ED+K+A+ Sbjct: 121 MDKNIILKANFSVICNRLETLILLRTFTEEGAIVGEISPLPSLPGHTDEDVKNAI 175
>NS1_IADU3 (P08270) Nonstructural protein 1 (NS1) (NS1A) (Fragment)| Length = 227 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +2 Query: 350 LHRTIILKGDFNIAANRIHT---VRRYPLQDVVALDSSNIIEVQGCTTEDIKSAL 505 + + IILK +F++ NR+ T +R + + + S + + G T ED+K+A+ Sbjct: 121 MDKDIILKANFSVIFNRLETLILLRAFTEDGAIVGEISPLPSLPGHTDEDVKNAI 175
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = +1 Query: 358 DHNPEG*LQHCRKQNPHSEEIPLAGCRCTGQ 450 D +P Q C Q PHS E+P AG R TGQ Sbjct: 612 DPSPPWSTQVC--QGPHSSEMPPAGLRATGQ 640
>OXAA_PSEAE (Q9HT06) Inner membrane protein oxaA| Length = 578 Score = 30.0 bits (66), Expect = 5.9 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -3 Query: 190 QRITTKRLDSHQFPQLLQGRQMIWIDHF 107 ++I+TK +D QF + +QG + W+ H+ Sbjct: 269 KKISTKDMDKEQFKESVQGGWVAWLQHY 296
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 30.0 bits (66), Expect = 5.9 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +2 Query: 179 CNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHR 358 CN+ S++ S TP R++ + + P I E G+ YEE + L + Sbjct: 38 CNS---SSSSSSSATPPSLIRNEPV------FAAPAPIITPNWTEDGNESYEEAIDALKK 88 Query: 359 TIILKGDFN-IAANRIHTV 412 T+I KG+ +AA RI + Sbjct: 89 TLIEKGELEPVAATRIDQI 107 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,342,063 Number of Sequences: 219361 Number of extensions: 1981572 Number of successful extensions: 4913 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4731 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4911 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
