ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8b15 |
|---|---|
| Clone Library Name | barley_pub |
>FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reactive clone 1)| Length = 810 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Frame = +1 Query: 271 VRTSPLGKDRFYNRYWFFRREGRLFV----ENADSKEWGYYSTKEELDALIGSLNIKGIR 438 +R P+G DR +YWF R RL + EN + K+ YYSTK +L LI L+ K Sbjct: 317 IRHEPIGYDRSRRKYWFLNR--RLIIEEDTENENEKKIWYYSTKVQLAELIDCLD-KDYW 373 Query: 439 ERALKEQLDKFYDKI 483 E L + L++ ++I Sbjct: 374 EAELCKILEEMREEI 388
>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A| (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (ATP-dependent chromatin remodelling protein) (Williams syndrome transcription factor-related chromatin remodeli Length = 1556 Score = 37.7 bits (86), Expect = 0.021 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQL 462 W +YS+ E+LD LI +LN +G RE ALKE L Sbjct: 892 WCFYSSCEQLDQLIEALNSRGHRESALKETL 922 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Frame = +1 Query: 247 EKELLDQ------SVRTSPLGKDRFYNRYWFFRREGRLFVE 351 EKELL++ PLG+DR Y RYW F LF+E Sbjct: 786 EKELLEKIQSAIACTNIFPLGRDRMYRRYWIFPSIPGLFIE 826
>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)| Length = 1972 Score = 37.4 bits (85), Expect = 0.027 Identities = 20/54 (37%), Positives = 32/54 (59%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEKRLKGGDTSVV 531 W E+L AL+ L+++GIRE+AL++Q+ K D I A LK D +++ Sbjct: 1522 WWRIIDPEDLKALLKVLHLRGIREKALQKQIQKHLDYITQAC---LKNKDVAII 1572 Score = 32.7 bits (73), Expect = 0.67 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 Query: 268 SVRTSPLGKDRFYNRYWFFRREGRLFVENADSKE 369 S+R+ G+DR+ RYW + G +FVE +S E Sbjct: 1175 SLRSVMFGQDRYRRRYWILPQCGGIFVEGMESGE 1208
>BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain protein 1B| (Williams-Beuren syndrome chromosome region 9 protein) (WBRS9) (Williams syndrome transcription factor) (hWALP2) Length = 1483 Score = 35.8 bits (81), Expect = 0.080 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKI 483 W +++ELD L+ L+ +GIRE LKE+L+K Y I Sbjct: 991 WFLCDSQKELDELLNCLHPQGIRESQLKERLEKRYQDI 1028 Score = 34.7 bits (78), Expect = 0.18 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 27/134 (20%) Frame = +1 Query: 31 QQKXREIARKNKEEQKLIVXSGNXKRXMN----QKNAVQDGNENVNG----QLVAKEGKE 186 +QK +E+ KNKE K+ G R + + + ++ +L+A + K+ Sbjct: 795 KQKRKEMEAKNKENGKVENGLGKTDRKKEIVKFEPQVDTEAEDMISAVKSRRLLAIQAKK 854 Query: 187 RKNAPPSKMGDAKLHLGRHLEKELLDQS------------------VRTSPLGKDRFYNR 312 + +M K+ L R E+E + + +R +P+G DR +NR Sbjct: 855 EREIQEREM---KVKLERQAEEERIRKHKAAAEKAFQEGIAKAKLVMRRTPIGTDRNHNR 911 Query: 313 YWFFRRE-GRLFVE 351 YW F E LF+E Sbjct: 912 YWLFSDEVPGLFIE 925
>BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain protein 1B| (Williams-Beuren syndrome chromosome region 9 protein homolog) (WBRS9) Length = 1479 Score = 35.0 bits (79), Expect = 0.14 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKI 483 W +++ELD L+ L+ +GIRE KE+L+K Y +I Sbjct: 991 WFLCDSQKELDELLSCLHPQGIRESQFKERLEKRYQEI 1028 Score = 33.5 bits (75), Expect = 0.40 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 24/131 (18%) Frame = +1 Query: 31 QQKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQDGNENVNGQLVAKEGK-----ERKN 195 +QK +E+ +NKE K G R Q + + A + + + K Sbjct: 796 KQKRKEMEARNKENGKEENVLGKVDRKKEIVKIEQQVEVEADDMISAVKSRRLLSMQAKR 855 Query: 196 APPSKMGDAKLHLGRHLEKELLDQS------------------VRTSPLGKDRFYNRYWF 321 + + K+ L R E+E + + +R +P+G DR +NRYW Sbjct: 856 KREIQERETKVRLEREAEEERMRKHKAAAEKAFQEGIAKAKLVLRRTPIGTDRNHNRYWL 915 Query: 322 FRRE-GRLFVE 351 F E LF+E Sbjct: 916 FSNEVPGLFIE 926
>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 932 Score = 33.9 bits (76), Expect = 0.30 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = +1 Query: 13 ISNKHLQQKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQD--GNENVNGQLVAKEGKE 186 +++ L K R+ K KE+ K V SG + N+ Q+ E++ AK+ K+ Sbjct: 862 VASPKLPDKFRDDYHKQKEKVKKAVDSGLKVKGYNKPGQKQELRSTEDIRKAREAKDKKK 921 Query: 187 RKNAPPSK 210 +KNA PS+ Sbjct: 922 QKNARPSR 929
>BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B (Extracellular| matrix protein F22) Length = 2130 Score = 33.9 bits (76), Expect = 0.30 Identities = 18/54 (33%), Positives = 32/54 (59%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEKRLKGGDTSVV 531 W + E+L +L L+++GIRE+AL++Q+ K D I A +K D +++ Sbjct: 1647 WWRITDPEDLKSLHKVLHLRGIREKALQKQIQKHMDYITLAC---IKNKDVAII 1697 Score = 33.1 bits (74), Expect = 0.52 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Frame = +1 Query: 250 KELLDQS--VRTSPLGKDRFYNRYWFFRREGRLFVENADSKEWGYYSTKEELDAL--IGS 417 K+L + S +R+ G+DR+ RYW + G +FVE +S E G +E + L + S Sbjct: 1286 KKLFEASHCLRSMMFGQDRYRRRYWILPQCGGIFVEGMESGE-GLEEIAKEKEKLKKVES 1344 Query: 418 LNIK 429 ++IK Sbjct: 1345 IHIK 1348
>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription| termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3) Length = 1878 Score = 33.1 bits (74), Expect = 0.52 Identities = 15/36 (41%), Positives = 24/36 (66%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYD 477 W + E LDA++ +L+ +GIRE+AL + L+K D Sbjct: 1412 WWWIRDPEMLDAMLKALHPRGIREKALHKHLNKHRD 1447 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +1 Query: 250 KELL--DQSVRTSPLGKDRFYNRYWFFRREGRLFVENADSKEWGYYSTKEELDAL 408 K+LL Q +R LG+DR+ RYW +FVE + K+E D+L Sbjct: 1075 KKLLHSSQMLRAVSLGQDRYRRRYWVLPYLAGIFVEGTEGNLVPEEVIKKETDSL 1129
>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A (Transcription| termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) Length = 1850 Score = 33.1 bits (74), Expect = 0.52 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 12/114 (10%) Frame = +1 Query: 106 RXMNQKNAVQDGNENVNGQLVAKEGKERKNAPPSKMGDAKLHLGRHLEK----------E 255 R M + + +++ E N V + RK + L RH+EK + Sbjct: 997 RIMEETSGIEEEEEEENTTAVHGR-RGRKEGEIDVAASSIPELERHIEKLSKRQLFFRKK 1055 Query: 256 LL--DQSVRTSPLGKDRFYNRYWFFRREGRLFVENADSKEWGYYSTKEELDALI 411 LL Q +R LG+DR+ YW +FVE ++ K+E ++L+ Sbjct: 1056 LLHSSQMLRAVSLGQDRYRRHYWVLPYLAGIFVEGSEGSTVTEDEIKQETESLM 1109 Score = 32.3 bits (72), Expect = 0.88 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYD 477 W + E LD L+ +L+ +GIRE+AL + L K D Sbjct: 1386 WWWIRDPETLDVLLKALHPRGIREKALHKHLSKHKD 1421
>GP5D_CHLTR (P10559) Virulence plasmid parA family protein pGP5-D (Protein P-9)| Length = 264 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -3 Query: 510 LQSLLHSTSYLVVELVKLFFECSLPYPFNV*R-PNERIKLFLGAIVPPLFGICILDKKPS 334 L+S++ T V+L+ F ++ R P+ +KLFL P + ICI+D PS Sbjct: 70 LKSIICETKKDSVDLIPASFLSEQFRELDIHRGPSNNLKLFLNEYCAPFYDICIIDTPPS 129
>UBP8_MOUSE (Q80U87) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8) (Deubiquitinating enzyme 8) (mUBPy) Length = 1080 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/74 (28%), Positives = 38/74 (51%) Frame = +1 Query: 7 ALISNKHLQQKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQDGNENVNGQLVAKEGKE 186 AL+ K+ Q+K ++ ++++KL K Q +D EN Q AK+G+E Sbjct: 464 ALLMEKNKQEKELWDKQQKEQKEKLRREEQERKAGKTQDADERDSTEN---QHKAKDGQE 520 Query: 187 RKNAPPSKMGDAKL 228 +K++ +K D +L Sbjct: 521 KKDSKQTKTEDREL 534
>IF3A_ARATH (Q9LD55) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3| theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114) Length = 987 Score = 31.2 bits (69), Expect = 2.0 Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 8/175 (4%) Frame = +1 Query: 7 ALISNKHLQQKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQDG----NENVNGQLVAK 174 A ++ + Q+ REI K EE + ++ + +K + DG ++V + + + Sbjct: 610 AELAERRKQRILREIEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTE 669 Query: 175 EGKERKNAPPSKMGDAKLHLGRHLEKELLDQSVRTSPLGKDRFYNRY----WFFRREGRL 342 + KER+ AK +LE+ +++ +PL + + R F+ RE + Sbjct: 670 QLKERQEMEKKLQKLAKTM--DYLERAKREEA---APLIEAAYQRRLVEEREFYEREQQR 724 Query: 343 FVENADSKEWGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEKRL 507 VE + + K L ++G+ K I + + + +D+IR+ E+R+ Sbjct: 725 EVELSKERHESDLKEKNRLSRMLGN---KEIFQAQVISRRQAEFDRIRTEREERI 776
>UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) Length = 1118 Score = 30.8 bits (68), Expect = 2.6 Identities = 23/81 (28%), Positives = 39/81 (48%) Frame = +1 Query: 7 ALISNKHLQQKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQDGNENVNGQLVAKEGKE 186 AL+ K+ Q+K E+ + +EEQK + ++ +K ++ NE Q AKE E Sbjct: 470 ALLMEKNKQEK--ELRERQQEEQKEKLRKEEQEQKAKKKQEAEE-NEITEKQQKAKEEME 526 Query: 187 RKNAPPSKMGDAKLHLGRHLE 249 +K + +K D + R E Sbjct: 527 KKESEQAKKEDKETSAKRGKE 547
>YAFA_SCHPO (Q09863) Hypothetical protein C29E6.10c in chromosome I| Length = 1085 Score = 30.4 bits (67), Expect = 3.3 Identities = 30/118 (25%), Positives = 54/118 (45%) Frame = +1 Query: 16 SNKHLQQKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQDGNENVNGQLVAKEGKERKN 195 + K L+ K +E ARK +EEQ+L ++ + ++ + + + K K+++ Sbjct: 625 AQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQK---EREKKLKKQQQE 681 Query: 196 APPSKMGDAKLHLGRHLEKELLDQSVRTSPLGKDRFYNRYWFFRREGRLFVENADSKE 369 A KM + L EK +L++ R L K+ R RRE L + ++ KE Sbjct: 682 ADREKMA-REQRLREEEEKRILEERKRREKLDKEEEERR----RRE--LLEKESEEKE 732
>SYR_PYRHO (O59147) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 629 Score = 30.4 bits (67), Expect = 3.3 Identities = 11/43 (25%), Positives = 22/43 (51%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVE 498 WGY KEE + ++ L +G+++ + L Y ++ +E Sbjct: 177 WGYLRLKEEFERIMNELRERGLKDNPIDHALGLLYVEVNRRLE 219
>SYR_PYRKO (Q5JGH7) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 642 Score = 30.4 bits (67), Expect = 3.3 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEK 501 WGY + KEE + + L KG++E + + Y ++ +E+ Sbjct: 182 WGYLNLKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKKLEE 225
>ACN9_NEUCR (Q7SF55) Acetate non-utilizing protein 9, mitochondrial precursor| Length = 148 Score = 30.0 bits (66), Expect = 4.4 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +1 Query: 367 EWGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEKRLKGGD 519 EW Y+ K E ++ +G KG E+ EQ+ + Y+ + A++KR GD Sbjct: 85 EWQLYAQKIEGNSWVGEKLDKGKVEKMSDEQIGQLYE-LMQAIQKRGTEGD 134
>SYV_HELPJ (Q9ZK61) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 872 Score = 30.0 bits (66), Expect = 4.4 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%) Frame = +1 Query: 244 LEKELLDQSVRTSPLGKDRFYNRYWFFRREG---------RLFVENADSKEWGYYSTKEE 396 +EK+LL Q V+ LG+++F + W ++ + RL V A S+ T+ Sbjct: 97 VEKQLLSQGVKKEDLGREKFIQKVWEWKEKSGGAILEQMKRLGVSTAFSR------TRFT 150 Query: 397 LDALIGSLNIKGIRERALKEQLDKFYDK 480 +D KG+ +RA+K K+Y+K Sbjct: 151 MD--------KGL-QRAVKLAFLKWYEK 169
>SYR_PYRAB (Q9V0V2) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 625 Score = 30.0 bits (66), Expect = 4.4 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = +1 Query: 370 WGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEK 501 WGY +E+ + ++ L KGI+E + L Y ++ +E+ Sbjct: 177 WGYLKLREKFEKIMKELKEKGIKEDPIDHVLGLLYVEVNRVLEE 220
>GP5D_CHLMU (Q46441) Virulence plasmid parA family protein pGP5-D| Length = 268 Score = 30.0 bits (66), Expect = 4.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 414 PNERIKLFLGAIVPPLFGICILDKKPS 334 P+ ++LFL PL+ +CI+D PS Sbjct: 107 PSSNLRLFLDEYCSPLYDVCIVDTPPS 133
>DNAK_CHLAB (Q8GH79) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 659 Score = 30.0 bits (66), Expect = 4.4 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 14/81 (17%) Frame = +1 Query: 52 ARKNKEEQKLIVXSGNXKRXMNQ-----KNAVQDGNENVNGQLVAKEGKER--------- 189 A KNKEE K + + + + + A+ D EN+ L KE +ER Sbjct: 517 AEKNKEEDKKRREASDVRNEADSMIFRAEKAISDYKENIPESLT-KEIEERIEKVRSALK 575 Query: 190 KNAPPSKMGDAKLHLGRHLEK 252 ++AP K+ +A L RH++K Sbjct: 576 EDAPTEKIKEASDELSRHMQK 596
>HTPG_GLUOX (Q5FS51) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 623 Score = 29.6 bits (65), Expect = 5.7 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 6/57 (10%) Frame = +1 Query: 358 DSKEWGYYSTKEELDALIGSLNIKGIRERALK-----EQLDKFY-DKIRSAVEKRLK 510 D ++ YY T + LDAL S ++G R R L+ + +D F+ +++ S EK L+ Sbjct: 422 DGQDAIYYLTGDSLDALKSSAQLEGFRARGLEVLLLSDPVDGFWPERLSSYQEKPLR 478
>INO2_ARATH (Q38862) Inositol-3-phosphate synthase isozyme 2 (EC 5.5.1.4)| (Myo-inositol-1-phosphate synthase 2) (MI-1-P synthase 2) (IPS 2) Length = 510 Score = 29.6 bits (65), Expect = 5.7 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +1 Query: 25 HLQQKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQDGNENVNGQLVAKEGKERKNAPP 204 H+ + RE KNK ++ +++ + N +R N + D EN L+A K+ P Sbjct: 208 HIIKDMREFKEKNKVDKLVVLWTANTERYSNVIVGLNDTTEN----LLASVEKDESEISP 263 Query: 205 SKM 213 S + Sbjct: 264 STL 266
>IF2_STRP3 (Q8K644) Translation initiation factor IF-2| Length = 953 Score = 29.6 bits (65), Expect = 5.7 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Frame = +1 Query: 34 QKXREIARKNKEEQKLIVXSGNXKRXMNQKNAVQDG-NENVNGQLVAKEGKERK--NAPP 204 +K RE+ ++E QK K+ N +N V++ N N N K+GK K N P Sbjct: 303 EKNRELTHHSQEGQK------KNKKSWNSQNQVRNQKNSNWNKNKKTKKGKNAKNTNTAP 356 Query: 205 SKMGDAKLH 231 + + K H Sbjct: 357 KPVTERKFH 365
>MSRB_CLOPE (Q8XJZ6) Peptide methionine sulfoxide reductase msrB (EC 1.8.4.6)| Length = 147 Score = 29.3 bits (64), Expect = 7.5 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Frame = +1 Query: 277 TSPLGKDR-FYNRYWFFRREGRLFVENADSKEWGYYSTKEELDALIG-SLNIKGIRERAL 450 T G +R F N YW F EG ++V+ + +++K++ + G K I + Sbjct: 23 TQENGTERPFTNEYWDFNGEG-IYVDITTGEP--LFTSKDKFHSSCGWPAFSKPIDRSII 79 Query: 451 KEQLDKFYDKIRSAVEKRL 507 KE++DK + IR+ V +L Sbjct: 80 KEKVDKSHGMIRTEVRSKL 98
>SYV_CLOAB (Q97GG8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 29.3 bits (64), Expect = 7.5 Identities = 11/41 (26%), Positives = 23/41 (56%) Frame = +1 Query: 244 LEKELLDQSVRTSPLGKDRFYNRYWFFRREGRLFVENADSK 366 +EKE+L + + +G+++F R W + +E R ++ K Sbjct: 96 VEKEILKEGLNKKEMGREKFLERVWDWTKEYRERIKGQQKK 136
>OXAA_NEIMB (Q9JXS4) Inner membrane protein oxaA| Length = 545 Score = 28.9 bits (63), Expect = 9.7 Identities = 24/64 (37%), Positives = 32/64 (50%) Frame = +1 Query: 331 EGRLFVENADSKEWGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEKRLK 510 E + F+ D KE+ Y + E LDA G+ +KGI A K+Q DK VE RL Sbjct: 88 ENKPFILFGDGKEYTYVAQSELLDAQ-GNNILKGIGFSAPKKQYSLEGDK----VEVRLS 142 Query: 511 GGDT 522 +T Sbjct: 143 APET 146
>OXAA_NEIMA (Q9JW48) Inner membrane protein oxaA| Length = 545 Score = 28.9 bits (63), Expect = 9.7 Identities = 24/64 (37%), Positives = 32/64 (50%) Frame = +1 Query: 331 EGRLFVENADSKEWGYYSTKEELDALIGSLNIKGIRERALKEQLDKFYDKIRSAVEKRLK 510 E + F+ D KE+ Y + E LDA G+ +KGI A K+Q DK VE RL Sbjct: 88 ENKPFILFGDGKEYTYVAQSELLDAQ-GNNILKGIGFSAPKKQYSLEGDK----VEVRLS 142 Query: 511 GGDT 522 +T Sbjct: 143 APET 146
>NUCM_CAFRO (Q9TAJ7) NADH-ubiquinone oxidoreductase 49 kDa subunit (EC 1.6.5.3)| (EC 1.6.99.3) (NADH dehydrogenase subunit 7) Length = 398 Score = 28.9 bits (63), Expect = 9.7 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = +2 Query: 116 IRKMLYRTATRMLMASLWQKKGRRGKT-----LPPAKWEMRNCIWGGILRKNYWTNQYEL 280 IR R + R++MA L G K+ +PP +WEM+N + I Y+T +++ Sbjct: 267 IRMQEMRQSLRIMMACLKYLPGGSIKSDDKKFVPPLRWEMKNSMESVIHHFKYFTEGFKV 326
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 28.9 bits (63), Expect = 9.7 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +1 Query: 322 FRREGRLFVENADSKEWGYYSTKEELDALIGSLNIKGIRERALKEQL 462 + REGR + S+E G E+ I +NIK +++++K+QL Sbjct: 387 YEREGRAVLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQL 433 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,024,076 Number of Sequences: 219361 Number of extensions: 1481809 Number of successful extensions: 4792 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4777 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
