ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8b15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466214.1| Oryza sativa (japonica cultivar-group), mRNA 139 1e-29
2dbj|AK067393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
4dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
6emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4,... 117 4e-23
7gb|BT018510.1| Zea mays clone EL01N0429E08.d mRNA sequence 84 5e-13
8ref|XM_472607.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
9ref|NM_120950.2| Arabidopsis thaliana unknown protein AT5G08630 ... 44 0.47
10gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Canc... 44 0.47
11emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 44 0.47
12emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4,... 44 0.47
13gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosom... 42 1.9
14emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.9
15emb|Z77136.1|CEZC376 Caenorhabditis elegans Cosmid ZC376, comple... 42 1.9
16emb|AL353640.7| Human DNA sequence from clone RP11-458E15 on chr... 42 1.9
17emb|AL133462.23| Human DNA sequence from clone RP11-108A16 on ch... 42 1.9
18gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, com... 42 1.9
19gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.9
20gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Canc... 42 1.9
21emb|BX005070.10| Zebrafish DNA sequence from clone DKEY-13B19 in... 42 1.9
22gb|AC012380.1|AC012380 Genomic Sequence For Homo sapiens Clone 1... 42 1.9
23emb|CT009711.11| Mouse DNA sequence from clone RP23-128L22 on ch... 42 1.9
24gb|AF053936.1|AF053936 Homo sapiens clone P1-5343 from chromosom... 42 1.9
25emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chr... 42 1.9
26ref|NM_178952.1| Arabidopsis thaliana PPOX AT4G01690 (PPOX) tran... 40 7.3
27ref|NM_116399.2| Arabidopsis thaliana PPOX; protoporphyrinogen o... 40 7.3
28gb|BT020418.1| Arabidopsis thaliana At4g01690 mRNA, complete cds 40 7.3
29gb|AC101776.7| Mus musculus chromosome 7, clone RP24-118K20, com... 40 7.3
30emb|CR974470.7| L.saxatilis DNA sequence from clone CH317-148L22... 40 7.3
31emb|Z27079.1|CET05G5 Caenorhabditis elegans Cosmid T05G5, comple... 40 7.3
32gb|AC122857.2| Mus musculus BAC clone RP23-125A8 from 2, complet... 40 7.3
33gb|AC113204.7| Mus musculus chromosome 12, clone RP23-312J1, com... 40 7.3
34emb|AL353806.9| Human DNA sequence from clone RP11-174A8 on chro... 40 7.3
35ref|XM_778518.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.3
36emb|X68384.1|CECDC2A C.elegans mRNA for p34 cdc2 homologue 40 7.3
37gb|AC162911.2| Mus musculus BAC clone RP24-363M14 from chromosom... 40 7.3
38emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 7.3
39emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 40 7.3
40gb|BC036635.1| Homo sapiens cDNA clone IMAGE:5296353 40 7.3
41gb|AC158757.6| Mus musculus chromosome 5, clone RP23-64D3, compl... 40 7.3
42gb|AC104335.2| Homo sapiens chromosome 1 clone RP11-433K2, compl... 40 7.3
43emb|AL137577.1|HSM802327 Homo sapiens mRNA; cDNA DKFZp564M0764 (... 40 7.3
44gb|AC069360.7| Homo sapiens chromosome 11, clone CTD1-2003C8, co... 40 7.3
45gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, compl... 40 7.3
46gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, comple... 40 7.3
47gb|AC092783.2| Homo sapiens chromosome 1 clone RP5-827O9, comple... 40 7.3
48gb|S75262.1| ncc-1=p34cdc2 kinase [Caenorhabditis elegans, mRNA,... 40 7.3
49ref|XM_625739.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.3
50gb|AF386944.1|AF386944 Arabidopsis thaliana Unknown protein (T15... 40 7.3
51emb|BX640463.14| Zebrafish DNA sequence from clone DKEY-29P10 in... 40 7.3
52ref|NM_001027576.1| Caenorhabditis elegans Cyclin-Dependent Kina... 40 7.3
53emb|BX819805.1|CNS0A8JY Arabidopsis thaliana Full-length cDNA Co... 40 7.3
54emb|BX828438.1|CNS0A2WO Arabidopsis thaliana Full-length cDNA Co... 40 7.3
55emb|BX827373.1|CNS0A2TT Arabidopsis thaliana Full-length cDNA Co... 40 7.3
56emb|BX827648.1|CNS0A2R8 Arabidopsis thaliana Full-length cDNA Co... 40 7.3
57gb|AC015540.9|AC015540 Homo sapiens 12 BAC RP11-385G16 (Roswell ... 40 7.3
58gb|BC014360.1| Homo sapiens, clone IMAGE:3930408, mRNA 40 7.3
59gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, com... 40 7.3
60gb|AC112933.16| Mus musculus chromosome 5, clone RP24-418J2, com... 40 7.3
61dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, ... 40 7.3
62gb|AF129109.1|AF129109 Caenorhabditis elegans CDK1 ortholog (ncc... 40 7.3
63emb|CT027556.11| Mouse DNA sequence from clone RP23-405M23 on ch... 40 7.3
64dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.3
65gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 40 7.3
66gb|BT020535.1| Arabidopsis thaliana At4g01690 gene, complete cds 40 7.3
67emb|AL928914.15| Mouse DNA sequence from clone RP23-399J8 on chr... 40 7.3
68emb|BX005375.9| Zebrafish DNA sequence from clone CH211-207N2 in... 40 7.3
69dbj|D83139.1|ATHPPOX Arabidopsis thaliana mRNA for protoporphyri... 40 7.3
70dbj|AP001348.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 7.3 
>ref|XM_466214.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2425

 Score =  139 bits (70), Expect = 1e-29
 Identities = 106/118 (89%)
 Strand = Plus / Plus

                                                                        
Query: 286  cttggaaaagacagattctataacaggtattggttttttaggcgtgaaggaaggcttttt 345
            |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1689 cttggaaaagacagacactataacaggtattggtttttcaggcgtgaaggaaggcttttt 1748

                                                                      
Query: 346  gtcgagaatgcagattccaaagagtgggggtactatagcaccaaggaagagcttgatg 403
            || || | ||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||
Sbjct: 1749 gttgaaagtgcagattcaaaagaatggggatactacagcactaaggaagagctcgatg 1806
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>dbj|AK067393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B07, full
            insert sequence
          Length = 2425

 Score =  139 bits (70), Expect = 1e-29
 Identities = 106/118 (89%)
 Strand = Plus / Plus

                                                                        
Query: 286  cttggaaaagacagattctataacaggtattggttttttaggcgtgaaggaaggcttttt 345
            |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1689 cttggaaaagacagacactataacaggtattggtttttcaggcgtgaaggaaggcttttt 1748

                                                                      
Query: 346  gtcgagaatgcagattccaaagagtgggggtactatagcaccaaggaagagcttgatg 403
            || || | ||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||
Sbjct: 1749 gttgaaagtgcagattcaaaagaatggggatactacagcactaaggaagagctcgatg 1806
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 7e-28
 Identities = 100/111 (90%)
 Strand = Plus / Minus

                                                                            
Query: 286      cttggaaaagacagattctataacaggtattggttttttaggcgtgaaggaaggcttttt 345
                |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 21084772 cttggaaaagacagacactataacaggtattggtttttcaggcgtgaaggaaggcttttt 21084713

                                                                   
Query: 346      gtcgagaatgcagattccaaagagtgggggtactatagcaccaaggaagag 396
                || || | ||||||||| ||||| ||||| ||||| ||||| |||||||||
Sbjct: 21084712 gttgaaagtgcagattcaaaagaatggggatactacagcactaaggaagag 21084662
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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score =  133 bits (67), Expect = 7e-28
 Identities = 100/111 (90%)
 Strand = Plus / Minus

                                                                         
Query: 286   cttggaaaagacagattctataacaggtattggttttttaggcgtgaaggaaggcttttt 345
             |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 86517 cttggaaaagacagacactataacaggtattggtttttcaggcgtgaaggaaggcttttt 86458

                                                                
Query: 346   gtcgagaatgcagattccaaagagtgggggtactatagcaccaaggaagag 396
             || || | ||||||||| ||||| ||||| ||||| ||||| |||||||||
Sbjct: 86457 gttgaaagtgcagattcaaaagaatggggatactacagcactaaggaagag 86407
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                            
Query: 286      cttggaaaagacagattctataacaggtattggttttttaggcgtgaaggaaggcttttt 345
                |||||||||||||| | ||| ||||| |||||||||||||||| ||||||| | ||||||
Sbjct: 21866622 cttggaaaagacaggtactacaacagatattggttttttaggcatgaaggacgacttttt 21866563

                                                                   
Query: 346      gtcgagaatgcagattccaaagagtgggggtactatagcaccaaggaagag 396
                ||||| | ||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 21866562 gtcgaaagtgcagattccaaagaatggggttactacagcactaaggaagag 21866512



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                            
Query: 395      agcttgatgcgctcattgggtctttaaacattaaagggataagggagagagcactcaaag 454
                ||||||||||||| ||||| || |||||  ||||||| ||||||||||||||||| ||| 
Sbjct: 21866435 agcttgatgcgcttattggatcgttaaatgttaaaggcataagggagagagcactgaaac 21866376

                                   
Query: 455      aacagcttgacaagttcta 473
                  |||||||| ||||||||
Sbjct: 21866375 ggcagcttgataagttcta 21866357



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 150/186 (80%), Gaps = 4/186 (2%)
 Strand = Plus / Minus

                                                                            
Query: 10       ttgatcagcaacaagcacttgcagcagaaaagnagagagattgctagaaagaataaggaa 69
                |||| |||||||||||  ||||||||  |||  |||||| |||||||||| || ||||||
Sbjct: 21872695 ttgaccagcaacaagctattgcagcatcaaa-aagagagcttgctagaaataaaaaggaa 21872637

                                                                            
Query: 70       gagcagaagctgatcgtggnaagtggcaacagnaaaaggnaaatgaatcagaaaaatgct 129
                ||||| ||||||  | ||| ||| ||  |||| |||||| |||||| ||||| | |||||
Sbjct: 21872636 gagcataagctggccatgg-aaggggtgacag-aaaagg-aaatgagtcagacagatgct 21872580

                                                                            
Query: 130      gtacaggacggcaacgagaatgttaatggccagcttgtggcaaaagaagggaaggagagg 189
                | | |  | | ||||| |||||| ||||| ||| |||||| ||||||||| ||||||| |
Sbjct: 21872579 gcagaaaatgtcaacgggaatgtaaatggtcaggttgtggaaaaagaaggaaaggagaag 21872520

                      
Query: 190      aaaaac 195
                ||||||
Sbjct: 21872519 aaaaac 21872514



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 57       aaagaataaggaagagcagaagctga 82
                |||||| |||||||||||||||||||
Sbjct: 20033600 aaagaacaaggaagagcagaagctga 20033625
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>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01,
             complete sequence
          Length = 127713

 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                         
Query: 286   cttggaaaagacagattctataacaggtattggttttttaggcgtgaaggaaggcttttt 345
             |||||||||||||| | ||| ||||| |||||||||||||||| ||||||| | ||||||
Sbjct: 51223 cttggaaaagacaggtactacaacagatattggttttttaggcatgaaggacgacttttt 51164

                                                                
Query: 346   gtcgagaatgcagattccaaagagtgggggtactatagcaccaaggaagag 396
             ||||| | ||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 51163 gtcgaaagtgcagattccaaagaatggggttactacagcactaaggaagag 51113



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                         
Query: 395   agcttgatgcgctcattgggtctttaaacattaaagggataagggagagagcactcaaag 454
             ||||||||||||| ||||| || |||||  ||||||| ||||||||||||||||| ||| 
Sbjct: 51036 agcttgatgcgcttattggatcgttaaatgttaaaggcataagggagagagcactgaaac 50977

                                
Query: 455   aacagcttgacaagttcta 473
               |||||||| ||||||||
Sbjct: 50976 ggcagcttgataagttcta 50958



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 150/186 (80%), Gaps = 4/186 (2%)
 Strand = Plus / Minus

                                                                         
Query: 10    ttgatcagcaacaagcacttgcagcagaaaagnagagagattgctagaaagaataaggaa 69
             |||| |||||||||||  ||||||||  |||  |||||| |||||||||| || ||||||
Sbjct: 57296 ttgaccagcaacaagctattgcagcatcaaa-aagagagcttgctagaaataaaaaggaa 57238

                                                                         
Query: 70    gagcagaagctgatcgtggnaagtggcaacagnaaaaggnaaatgaatcagaaaaatgct 129
             ||||| ||||||  | ||| ||| ||  |||| |||||| |||||| ||||| | |||||
Sbjct: 57237 gagcataagctggccatgg-aaggggtgacag-aaaagg-aaatgagtcagacagatgct 57181

                                                                         
Query: 130   gtacaggacggcaacgagaatgttaatggccagcttgtggcaaaagaagggaaggagagg 189
             | | |  | | ||||| |||||| ||||| ||| |||||| ||||||||| ||||||| |
Sbjct: 57180 gcagaaaatgtcaacgggaatgtaaatggtcaggttgtggaaaaagaaggaaaggagaag 57121

                   
Query: 190   aaaaac 195
             ||||||
Sbjct: 57120 aaaaac 57115
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>gb|BT018510.1| Zea mays clone EL01N0429E08.d mRNA sequence
          Length = 1467

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 310 aggtattggttttttaggcgtgaaggaaggctttttgtcgagaatgcagattccaaagag 369
           ||||| |||||||| | ||||||||||||||||||||| || | ||||||||||| ||| 
Sbjct: 790 aggtactggtttttcaagcgtgaaggaaggctttttgttgaaactgcagattccagagaa 849

                                         
Query: 370 tgggggtactatagcaccaaggaagagctt 399
           ||||| ||||| | ||| ||||||||||||
Sbjct: 850 tggggttactacaacactaaggaagagctt 879
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>ref|XM_472607.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1833

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 150/186 (80%), Gaps = 4/186 (2%)
 Strand = Plus / Plus

                                                                        
Query: 10   ttgatcagcaacaagcacttgcagcagaaaagnagagagattgctagaaagaataaggaa 69
            |||| |||||||||||  ||||||||  |||  |||||| |||||||||| || ||||||
Sbjct: 1343 ttgaccagcaacaagctattgcagcatcaaa-aagagagcttgctagaaataaaaaggaa 1401

                                                                        
Query: 70   gagcagaagctgatcgtggnaagtggcaacagnaaaaggnaaatgaatcagaaaaatgct 129
            ||||| ||||||  | ||| ||| ||  |||| |||||| |||||| ||||| | |||||
Sbjct: 1402 gagcataagctggccatgg-aaggggtgacag-aaaagg-aaatgagtcagacagatgct 1458

                                                                        
Query: 130  gtacaggacggcaacgagaatgttaatggccagcttgtggcaaaagaagggaaggagagg 189
            | | |  | | ||||| |||||| ||||| ||| |||||| ||||||||| ||||||| |
Sbjct: 1459 gcagaaaatgtcaacgggaatgtaaatggtcaggttgtggaaaaagaaggaaaggagaag 1518

                  
Query: 190  aaaaac 195
            ||||||
Sbjct: 1519 aaaaac 1524
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>ref|NM_120950.2| Arabidopsis thaliana unknown protein AT5G08630 mRNA, complete cds
          Length = 2562

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 343  tttgtcgagaatgcagattccaaagagtgggggtactatagcaccaaggaagagcttgat 402
            ||||| |||||| | |||||| |||| ||||| || |||| | ||||||||||||| |||
Sbjct: 2085 tttgttgagaattctgattccgaagaatggggctattataccgccaaggaagagctggat 2144

              
Query: 403  gc 404
            ||
Sbjct: 2145 gc 2146
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>gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 222139

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 492   tgtggagaagagattgaaggga 513
             ||||||||||||||||||||||
Sbjct: 50894 tgtggagaagagattgaaggga 50915
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>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
            complete sequence
          Length = 112404

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 57   aaagaataaggaagagcagaagctga 82
            |||||| |||||||||||||||||||
Sbjct: 3504 aaagaacaaggaagagcagaagctga 3529
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>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14,
             complete sequence
          Length = 158312

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 57    aaagaataaggaagagcagaagctga 82
             |||||| |||||||||||||||||||
Sbjct: 96263 aaagaacaaggaagagcagaagctga 96288
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>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence
          Length = 199083

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   aaaagaagggaaggagaggaa 191
             |||||||||||||||||||||
Sbjct: 17624 aaaagaagggaaggagaggaa 17604
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 389     aggaagagcttgatgcgctca 409
               |||||||||||||||||||||
Sbjct: 2627391 aggaagagcttgatgcgctca 2627371
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>emb|Z77136.1|CEZC376 Caenorhabditis elegans Cosmid ZC376, complete sequence
          Length = 28762

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 172  aaagaagggaaggagaggaaa 192
            |||||||||||||||||||||
Sbjct: 9119 aaagaagggaaggagaggaaa 9099
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>emb|AL353640.7| Human DNA sequence from clone RP11-458E15 on chromosome 20 Contains
             ESTs, STSs, GSSs and a CpG island, complete sequence
          Length = 62477

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   aaagaagggaaggagaggaaa 192
             |||||||||||||||||||||
Sbjct: 15577 aaagaagggaaggagaggaaa 15597
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>emb|AL133462.23| Human DNA sequence from clone RP11-108A16 on chromosome 20 Contains the
             5' end of the gene for a novel protein (LOC284776),
             complete sequence
          Length = 84478

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    agagagattgctagaaagaat 63
             |||||||||||||||||||||
Sbjct: 33720 agagagattgctagaaagaat 33700
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>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence
          Length = 187669

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   gaagggaaggagaggaaaaac 195
             |||||||||||||||||||||
Sbjct: 80715 gaagggaaggagaggaaaaac 80735
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 389     aggaagagcttgatgcgctca 409
               |||||||||||||||||||||
Sbjct: 2483143 aggaagagcttgatgcgctca 2483123
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>gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 92128

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 175  gaagggaaggagaggaaaaac 195
            |||||||||||||||||||||
Sbjct: 2341 gaagggaaggagaggaaaaac 2321
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>emb|BX005070.10| Zebrafish DNA sequence from clone DKEY-13B19 in linkage group 17,
              complete sequence
          Length = 242955

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 383    gcaccaaggaagagcttgatg 403
              |||||||||||||||||||||
Sbjct: 232962 gcaccaaggaagagcttgatg 232942
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>gb|AC012380.1|AC012380 Genomic Sequence For Homo sapiens Clone 125H5, Chromosome 20,
            complete sequence
          Length = 108623

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   agagagattgctagaaagaat 63
            |||||||||||||||||||||
Sbjct: 8520 agagagattgctagaaagaat 8500
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>emb|CT009711.11| Mouse DNA sequence from clone RP23-128L22 on chromosome 13, complete
             sequence
          Length = 224715

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 174   agaagggaaggagaggaaaaa 194
             |||||||||||||||||||||
Sbjct: 76822 agaagggaaggagaggaaaaa 76842
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>gb|AF053936.1|AF053936 Homo sapiens clone P1-5343 from chromosome 20, complete sequence
          Length = 25663

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   agagagattgctagaaagaat 63
            |||||||||||||||||||||
Sbjct: 5683 agagagattgctagaaagaat 5663
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>emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chromosome 2, complete
             sequence
          Length = 126095

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   aagaagggaaggagaggaaaa 193
             |||||||||||||||||||||
Sbjct: 99906 aagaagggaaggagaggaaaa 99886
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>ref|NM_178952.1| Arabidopsis thaliana PPOX AT4G01690 (PPOX) transcript variant
           AT4G01690.2 mRNA, complete cds
          Length = 1983

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 798 aggagaggaaaaacgctccc 817
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>ref|NM_116399.2| Arabidopsis thaliana PPOX; protoporphyrinogen oxidase AT4G01690
           (PPOX) transcript variant AT4G01690.1 mRNA, complete cds
          Length = 2076

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 798 aggagaggaaaaacgctccc 817
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>gb|BT020418.1| Arabidopsis thaliana At4g01690 mRNA, complete cds
          Length = 1614

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 761 aggagaggaaaaacgctccc 780
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>gb|AC101776.7| Mus musculus chromosome 7, clone RP24-118K20, complete sequence
          Length = 177972

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    agaagggaaggagaggaaaa 193
              ||||||||||||||||||||
Sbjct: 137379 agaagggaaggagaggaaaa 137360
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>emb|CR974470.7| L.saxatilis DNA sequence from clone CH317-148L22, complete sequence
          Length = 112797

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    tgcagattccaaagagtggg 373
              ||||||||||||||||||||
Sbjct: 103235 tgcagattccaaagagtggg 103254
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>emb|Z27079.1|CET05G5 Caenorhabditis elegans Cosmid T05G5, complete sequence
          Length = 36180

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tgacaagttctacgacaaga 481
             ||||||||||||||||||||
Sbjct: 19919 tgacaagttctacgacaaga 19938
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>gb|AC122857.2| Mus musculus BAC clone RP23-125A8 from 2, complete sequence
          Length = 221951

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tgtggagaagagattgaagg 511
              ||||||||||||||||||||
Sbjct: 151182 tgtggagaagagattgaagg 151163
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>gb|AC113204.7| Mus musculus chromosome 12, clone RP23-312J1, complete sequence
          Length = 207293

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   ttgtggcaaaagaagggaag 183
             ||||||||||||||||||||
Sbjct: 72552 ttgtggcaaaagaagggaag 72571
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>emb|AL353806.9| Human DNA sequence from clone RP11-174A8 on chromosome 9 Contains part
             of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor
             protein 2 (paralemmin 2), complete sequence
          Length = 111051

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aaagaagggaaggagaggaa 191
             ||||||||||||||||||||
Sbjct: 80066 aaagaagggaaggagaggaa 80085
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>ref|XM_778518.1| PREDICTED: Strongylocentrotus purpuratus similar to
            1-phosphatidylinositol-4,5-bisphosphate
            phosphodiesterase-like 4 (Phosphoinositide phospholipase
            C-like 4) (Phospholipase C-like 4) (LOC578345), mRNA
          Length = 8178

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   aagcacttgcagcagaaaag 41
            ||||||||||||||||||||
Sbjct: 7601 aagcacttgcagcagaaaag 7620
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>emb|X68384.1|CECDC2A C.elegans mRNA for p34 cdc2 homologue
          Length = 1216

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 tgacaagttctacgacaaga 481
           ||||||||||||||||||||
Sbjct: 817 tgacaagttctacgacaaga 836
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>gb|AC162911.2| Mus musculus BAC clone RP24-363M14 from chromosome 12, complete sequence
          Length = 150202

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    agaagggaaggagaggaaaa 193
              ||||||||||||||||||||
Sbjct: 132427 agaagggaaggagaggaaaa 132446
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    tggccagcttgtggcaaaagaagg 179
              |||||||||||| |||||||||||
Sbjct: 434263 tggccagcttgttgcaaaagaagg 434286
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    aggagaggaaaaacgctccc 201
              ||||||||||||||||||||
Sbjct: 153573 aggagaggaaaaacgctccc 153592
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>gb|BC036635.1| Homo sapiens cDNA clone IMAGE:5296353
          Length = 1063

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 ttgtcgagaatgcagattcc 363
           ||||||||||||||||||||
Sbjct: 71  ttgtcgagaatgcagattcc 90
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>gb|AC158757.6| Mus musculus chromosome 5, clone RP23-64D3, complete sequence
          Length = 247058

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   agaaagaataaggaagagca 74
            ||||||||||||||||||||
Sbjct: 9349 agaaagaataaggaagagca 9330
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>gb|AC104335.2| Homo sapiens chromosome 1 clone RP11-433K2, complete sequence
          Length = 212426

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    gcaacaagcacttgcagcag 36
             ||||||||||||||||||||
Sbjct: 73951 gcaacaagcacttgcagcag 73932
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>emb|AL137577.1|HSM802327 Homo sapiens mRNA; cDNA DKFZp564M0764 (from clone DKFZp564M0764)
          Length = 1512

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 ttgtcgagaatgcagattcc 363
           ||||||||||||||||||||
Sbjct: 469 ttgtcgagaatgcagattcc 450
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>gb|AC069360.7| Homo sapiens chromosome 11, clone CTD1-2003C8, complete sequence
          Length = 124409

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    ttgtcgagaatgcagattcc 363
              ||||||||||||||||||||
Sbjct: 101795 ttgtcgagaatgcagattcc 101776
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>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence
          Length = 192565

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 491    ctgtggagaagagattgaag 510
              ||||||||||||||||||||
Sbjct: 190096 ctgtggagaagagattgaag 190077
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>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence
          Length = 184520

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 171   aaaagaagggaaggagaggaaaaa 194
             |||||||||||||| |||||||||
Sbjct: 58389 aaaagaagggaaggggaggaaaaa 58412
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>gb|AC092783.2| Homo sapiens chromosome 1 clone RP5-827O9, complete sequence
          Length = 111763

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 447   actcaaagaacagcttgacaagtt 470
             |||||||||||||||| |||||||
Sbjct: 36330 actcaaagaacagctttacaagtt 36353
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>gb|S75262.1| ncc-1=p34cdc2 kinase [Caenorhabditis elegans, mRNA, 1190 nt]
          Length = 1190

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 tgacaagttctacgacaaga 481
           ||||||||||||||||||||
Sbjct: 815 tgacaagttctacgacaaga 834
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>ref|XM_625739.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_1430),
            partial mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 49   attgctagaaagaataaggaagag 72
            ||||||||||||||||| ||||||
Sbjct: 985  attgctagaaagaataaagaagag 1008
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>gb|AF386944.1|AF386944 Arabidopsis thaliana Unknown protein (T15B16.13) mRNA, complete cds
          Length = 1709

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 800 aggagaggaaaaacgctccc 819
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>emb|BX640463.14| Zebrafish DNA sequence from clone DKEY-29P10 in linkage group 18,
              complete sequence
          Length = 233058

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    tgggtctttaaacattaaag 430
              ||||||||||||||||||||
Sbjct: 103890 tgggtctttaaacattaaag 103871
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>ref|NM_001027576.1| Caenorhabditis elegans Cyclin-Dependent Kinase family member
           (cdk-1) (cdk-1) mRNA, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 tgacaagttctacgacaaga 481
           ||||||||||||||||||||
Sbjct: 818 tgacaagttctacgacaaga 837
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>emb|BX819805.1|CNS0A8JY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZG07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1695

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 788 aggagaggaaaaacgctccc 807
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>emb|BX828438.1|CNS0A2WO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH8ZD08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1689

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 795 aggagaggaaaaacgctccc 814
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>emb|BX827373.1|CNS0A2TT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS46ZB05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1704

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 789 aggagaggaaaaacgctccc 808
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>emb|BX827648.1|CNS0A2R8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS90ZA08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1646

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 750 aggagaggaaaaacgctccc 769
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>gb|AC015540.9|AC015540 Homo sapiens 12 BAC RP11-385G16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 133787

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 491   ctgtggagaagagattgaagggag 514
             ||||| ||||||||||||||||||
Sbjct: 80362 ctgtgtagaagagattgaagggag 80339
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>gb|BC014360.1| Homo sapiens, clone IMAGE:3930408, mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 ttgtcgagaatgcagattcc 363
           ||||||||||||||||||||
Sbjct: 75  ttgtcgagaatgcagattcc 94
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>gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, complete sequence
          Length = 192490

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    ttgtcgagaatgcagattcc 363
              ||||||||||||||||||||
Sbjct: 190653 ttgtcgagaatgcagattcc 190672
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>gb|AC112933.16| Mus musculus chromosome 5, clone RP24-418J2, complete sequence
          Length = 172244

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    agaaagaataaggaagagca 74
             ||||||||||||||||||||
Sbjct: 40463 agaaagaataaggaagagca 40444
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>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete
             sequences
          Length = 164274

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gaagggaaggagaggaaaaa 194
             ||||||||||||||||||||
Sbjct: 42027 gaagggaaggagaggaaaaa 42046
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>gb|AF129109.1|AF129109 Caenorhabditis elegans CDK1 ortholog (ncc-1) mRNA, complete cds
          Length = 1232

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 tgacaagttctacgacaaga 481
           ||||||||||||||||||||
Sbjct: 833 tgacaagttctacgacaaga 852
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>emb|CT027556.11| Mouse DNA sequence from clone RP23-405M23 on chromosome 12, complete
             sequence
          Length = 209313

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   agaagggaaggagaggaaaa 193
             ||||||||||||||||||||
Sbjct: 74857 agaagggaaggagaggaaaa 74838
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>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    gaagggaaggagaggaaaaa 194
              ||||||||||||||||||||
Sbjct: 139154 gaagggaaggagaggaaaaa 139173
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>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16
          Length = 90596

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   aggagaggaaaaacgctccc 201
             ||||||||||||||||||||
Sbjct: 40400 aggagaggaaaaacgctccc 40381
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>gb|BT020535.1| Arabidopsis thaliana At4g01690 gene, complete cds
          Length = 1661

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 780 aggagaggaaaaacgctccc 799
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>emb|AL928914.15| Mouse DNA sequence from clone RP23-399J8 on chromosome 2, complete
              sequence
          Length = 199873

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tgtggagaagagattgaagg 511
              ||||||||||||||||||||
Sbjct: 192740 tgtggagaagagattgaagg 192721
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>emb|BX005375.9| Zebrafish DNA sequence from clone CH211-207N2 in linkage group 17,
             complete sequence
          Length = 214178

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   gcaccaaggaagagcttgat 402
             ||||||||||||||||||||
Sbjct: 58075 gcaccaaggaagagcttgat 58056
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>dbj|D83139.1|ATHPPOX Arabidopsis thaliana mRNA for protoporphyrinogen oxidase, complete
           cds
          Length = 1614

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aggagaggaaaaacgctccc 201
           ||||||||||||||||||||
Sbjct: 761 aggagaggaaaaacgctccc 780
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>dbj|AP001348.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:f39G8,
             LL56-APP region, complete sequence
          Length = 18628

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gaagggaaggagaggaaaaa 194
             ||||||||||||||||||||
Sbjct: 17722 gaagggaaggagaggaaaaa 17741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,139,505
Number of Sequences: 3902068
Number of extensions: 5139505
Number of successful extensions: 112098
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111858
Number of HSP's gapped (non-prelim): 237
length of query: 542
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 519
effective length of database: 17,143,297,704
effective search space: 8897371508376
effective search space used: 8897371508376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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