| Clone Name | bags8b13 |
|---|---|
| Clone Library Name | barley_pub |
>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber| protein) Length = 386 Score = 120 bits (301), Expect = 2e-27 Identities = 66/172 (38%), Positives = 106/172 (61%), Gaps = 2/172 (1%) Frame = +3 Query: 12 PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191 P T++ P +A + DIC ST+AAP YFP HYF TH G++ E++L+DGGVA Sbjct: 162 PVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTSNGDI--YEFNLVDGGVA 219 Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365 +P + ++S+ T+ + + +P F+ K DY L++S+GTG+ + +K YTA E AKW Sbjct: 220 TVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKW 278 Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521 G LRW+ + + + AS+ M D + + +F+A + NYLR+Q+++LT Sbjct: 279 GPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALT 325
>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)| Length = 377 Score = 115 bits (288), Expect = 7e-26 Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 2/172 (1%) Frame = +3 Query: 12 PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191 P T++ P +A + DIC S +AAP YFP H+F TH N + E++L+DGGVA Sbjct: 153 PVIFTKSNLAKSPELDAKMYDICYSIAAAPIYFPPHHFVTH--TSNGATYEFNLVDGGVA 210 Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365 +P + ++S+ T+ + + +P F+ K DY L++S+GTG+ + +K YTA E AKW Sbjct: 211 TVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKW 269 Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521 G LRW+ + + + AS+ M D + + +F+A + NYLR+Q+++LT Sbjct: 270 GPLRWM-----LAIQQLTNAASSYMTDYYISTVFQARHSQNNYLRVQENALT 316
>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)| Length = 386 Score = 115 bits (287), Expect = 1e-25 Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 2/172 (1%) Frame = +3 Query: 12 PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191 P T++ P +A + DIC ST+AAP YFP H+F TH N + E++L+DG VA Sbjct: 162 PVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHHFVTH--TSNGATYEFNLVDGAVA 219 Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365 +P + ++S+ T+ + + +P F+ K DY L++S+GTG+ + +K YTA E AKW Sbjct: 220 TVGDPALLSLSVATR-LAQDDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKW 278 Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521 G LRW+ + + + AS+ M D + + +F+A + NYLR+Q+++LT Sbjct: 279 GPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALT 325
>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)| Length = 386 Score = 114 bits (284), Expect = 2e-25 Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 2/172 (1%) Frame = +3 Query: 12 PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191 P T++ P +A + DIC ST+AAPT+FP HYF T+ G+ E++L+DG VA Sbjct: 162 PVIFTKSNLAKSPELDAKMYDICYSTAAAPTFFPPHYFATNTSNGD--KYEFNLVDGAVA 219 Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365 ++P + ++S+ TK + + +P F K +Y L++S+GTG+ + +K YTA E AKW Sbjct: 220 TVDDPALLSISVATK-LAQVDPKFASIKSLNYKQMLLLSLGTGTTSEFDKTYTAEETAKW 278 Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521 G RW+ + + S AS+ M D + + F+AL + NYLR+Q+++LT Sbjct: 279 GTARWM-----LVIQKMTSAASSYMTDYYLSTAFQALDSQNNYLRVQENALT 325
>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)| Length = 386 Score = 113 bits (282), Expect = 4e-25 Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 2/171 (1%) Frame = +3 Query: 12 PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191 P T++ P +A + DIC ST+AAP YFP H+F TH N + E++L+DG VA Sbjct: 162 PVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTH--TSNGARYEFNLVDGAVA 219 Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365 +P + ++S+ T+ + + +P F+ K DY L++S+GTG+ + +K YTA E AKW Sbjct: 220 TVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKW 278 Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSL 518 G LRW+ + + + AS+ M D + + +F+A + NYLR+Q+++L Sbjct: 279 GPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENAL 324
>PA2G6_HUMAN (O60733) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 806 Score = 36.6 bits (83), Expect = 0.043 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = +3 Query: 84 STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMITKEVLRRNPDFT 263 S+ AAPTYF P G +DGG+ ANNPT+ AM+ E+ N D Sbjct: 636 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMT----EIHEYNQDLI 676 Query: 264 HGKPADYNNYL--IISIGTGSAKQ 329 A+ L ++S+GTG + Q Sbjct: 677 RKGQANKVKKLSIVVSLGTGRSPQ 700
>PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 752 Score = 35.8 bits (81), Expect = 0.074 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +3 Query: 84 STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMI---TKEVLRRNP 254 S+ AAPTYF P G +DGG+ ANNPT+ AM+ I ++++R+ Sbjct: 582 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMTEIHEYNQDMIRKGQ 626 Query: 255 DFTHGKPADYNNYLIISIGTGSAKQ 329 K + +++S+GTG + Q Sbjct: 627 GNKVKKLS-----IVVSLGTGKSPQ 646
>PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 751 Score = 35.8 bits (81), Expect = 0.074 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +3 Query: 84 STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMI---TKEVLRRNP 254 S+ AAPTYF P G +DGG+ ANNPT+ AM+ I ++++R+ Sbjct: 581 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMTEIHEYNQDMIRKGQ 625 Query: 255 DFTHGKPADYNNYLIISIGTGSAKQ 329 K + +++S+GTG + Q Sbjct: 626 GNKVKKLS-----IVVSLGTGKSPQ 645
>MCE1_DEBHA (Q6BT58) mRNA capping enzyme alpha subunit (mRNA| guanylyltransferase) (EC 2.7.7.50) (GTP--RNA guanylyltransferase) (GTase) Length = 458 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = +3 Query: 150 LSDREYHLIDGGVAANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNY 293 L +R+ I G + N T M+ + RRNP F +P + Y Sbjct: 4 LEERDMPEIPGTILDRNETQELRLMVADLLGRRNPSFPGAQPISFERY 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.129 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,921,128 Number of Sequences: 219361 Number of extensions: 692574 Number of successful extensions: 2208 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2189 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)