ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8b13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) ... 120 2e-27
2PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) ... 115 7e-26
3PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein) 115 1e-25
4PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein) 114 2e-25
5PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein) 113 4e-25
6PA2G6_HUMAN (O60733) 85 kDa calcium-independent phospholipase A2... 37 0.043
7PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2... 36 0.074
8PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (... 36 0.074
9MCE1_DEBHA (Q6BT58) mRNA capping enzyme alpha subunit (mRNA guan... 29 9.0

>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber|
           protein)
          Length = 386

 Score =  120 bits (301), Expect = 2e-27
 Identities = 66/172 (38%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
 Frame = +3

Query: 12  PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191
           P   T++     P  +A + DIC ST+AAP YFP HYF TH   G++   E++L+DGGVA
Sbjct: 162 PVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTSNGDI--YEFNLVDGGVA 219

Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365
              +P + ++S+ T+ + + +P F+  K  DY   L++S+GTG+  + +K YTA E AKW
Sbjct: 220 TVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKW 278

Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521
           G LRW+       +  + + AS+ M D + + +F+A   + NYLR+Q+++LT
Sbjct: 279 GPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALT 325



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>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)|
          Length = 377

 Score =  115 bits (288), Expect = 7e-26
 Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
 Frame = +3

Query: 12  PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191
           P   T++     P  +A + DIC S +AAP YFP H+F TH    N +  E++L+DGGVA
Sbjct: 153 PVIFTKSNLAKSPELDAKMYDICYSIAAAPIYFPPHHFVTH--TSNGATYEFNLVDGGVA 210

Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365
              +P + ++S+ T+ + + +P F+  K  DY   L++S+GTG+  + +K YTA E AKW
Sbjct: 211 TVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKW 269

Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521
           G LRW+       +  + + AS+ M D + + +F+A   + NYLR+Q+++LT
Sbjct: 270 GPLRWM-----LAIQQLTNAASSYMTDYYISTVFQARHSQNNYLRVQENALT 316



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>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)|
          Length = 386

 Score =  115 bits (287), Expect = 1e-25
 Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
 Frame = +3

Query: 12  PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191
           P   T++     P  +A + DIC ST+AAP YFP H+F TH    N +  E++L+DG VA
Sbjct: 162 PVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHHFVTH--TSNGATYEFNLVDGAVA 219

Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365
              +P + ++S+ T+ + + +P F+  K  DY   L++S+GTG+  + +K YTA E AKW
Sbjct: 220 TVGDPALLSLSVATR-LAQDDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKW 278

Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521
           G LRW+       +  + + AS+ M D + + +F+A   + NYLR+Q+++LT
Sbjct: 279 GPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALT 325



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>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)|
          Length = 386

 Score =  114 bits (284), Expect = 2e-25
 Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
 Frame = +3

Query: 12  PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191
           P   T++     P  +A + DIC ST+AAPT+FP HYF T+   G+    E++L+DG VA
Sbjct: 162 PVIFTKSNLAKSPELDAKMYDICYSTAAAPTFFPPHYFATNTSNGD--KYEFNLVDGAVA 219

Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365
             ++P + ++S+ TK + + +P F   K  +Y   L++S+GTG+  + +K YTA E AKW
Sbjct: 220 TVDDPALLSISVATK-LAQVDPKFASIKSLNYKQMLLLSLGTGTTSEFDKTYTAEETAKW 278

Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSLT 521
           G  RW+       +  + S AS+ M D + +  F+AL  + NYLR+Q+++LT
Sbjct: 279 GTARWM-----LVIQKMTSAASSYMTDYYLSTAFQALDSQNNYLRVQENALT 325



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>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)|
          Length = 386

 Score =  113 bits (282), Expect = 4e-25
 Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 2/171 (1%)
 Frame = +3

Query: 12  PSSSTRTRPGWXPLXNAHLSDICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA 191
           P   T++     P  +A + DIC ST+AAP YFP H+F TH    N +  E++L+DG VA
Sbjct: 162 PVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTH--TSNGARYEFNLVDGAVA 219

Query: 192 -ANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKW 365
              +P + ++S+ T+ + + +P F+  K  DY   L++S+GTG+  + +K YTA E AKW
Sbjct: 220 TVGDPALLSLSVATR-LAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKW 278

Query: 366 GVLRWLYDGGFTPLIDVFSHASADMVDIHAAVLFEALRIEENYLRIQDDSL 518
           G LRW+       +  + + AS+ M D + + +F+A   + NYLR+Q+++L
Sbjct: 279 GPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENAL 324



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>PA2G6_HUMAN (O60733) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)|
           (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI
           PLA2)
          Length = 806

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +3

Query: 84  STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMITKEVLRRNPDFT 263
           S+ AAPTYF         P G         +DGG+ ANNPT+ AM+    E+   N D  
Sbjct: 636 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMT----EIHEYNQDLI 676

Query: 264 HGKPADYNNYL--IISIGTGSAKQ 329
               A+    L  ++S+GTG + Q
Sbjct: 677 RKGQANKVKKLSIVVSLGTGRSPQ 700



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>PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)|
           (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI
           PLA2)
          Length = 752

 Score = 35.8 bits (81), Expect = 0.074
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +3

Query: 84  STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMI---TKEVLRRNP 254
           S+ AAPTYF         P G         +DGG+ ANNPT+ AM+ I    ++++R+  
Sbjct: 582 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMTEIHEYNQDMIRKGQ 626

Query: 255 DFTHGKPADYNNYLIISIGTGSAKQ 329
                K +     +++S+GTG + Q
Sbjct: 627 GNKVKKLS-----IVVSLGTGKSPQ 646



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>PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)|
           (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI
           PLA2)
          Length = 751

 Score = 35.8 bits (81), Expect = 0.074
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +3

Query: 84  STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMI---TKEVLRRNP 254
           S+ AAPTYF         P G         +DGG+ ANNPT+ AM+ I    ++++R+  
Sbjct: 581 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMTEIHEYNQDMIRKGQ 625

Query: 255 DFTHGKPADYNNYLIISIGTGSAKQ 329
                K +     +++S+GTG + Q
Sbjct: 626 GNKVKKLS-----IVVSLGTGKSPQ 645



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>MCE1_DEBHA (Q6BT58) mRNA capping enzyme alpha subunit (mRNA|
           guanylyltransferase) (EC 2.7.7.50) (GTP--RNA
           guanylyltransferase) (GTase)
          Length = 458

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 150 LSDREYHLIDGGVAANNPTMAAMSMITKEVLRRNPDFTHGKPADYNNY 293
           L +R+   I G +   N T     M+   + RRNP F   +P  +  Y
Sbjct: 4   LEERDMPEIPGTILDRNETQELRLMVADLLGRRNPSFPGAQPISFERY 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.129    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,921,128
Number of Sequences: 219361
Number of extensions: 692574
Number of successful extensions: 2208
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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