>LRC8A_RAT (Q4V8I7) Leucine-rich repeat-containing protein 8A|
          Length = 810

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +2

Query: 29  KLMHLLAGNAKLPSGINKMKL-LLTLSCSNIGKSTDTNIIQELSEMVSLTELELF-CNVT 202
           K++ L +  +KLP  +  + + L  LS +N G  T   ++  L +MV+LTELEL  C++ 
Sbjct: 547 KVLRLKSNLSKLPQVVTDVGVHLQKLSINNEG--TKLIVLNSLKKMVNLTELELIRCDLE 604

Query: 203 QAP 211
           + P
Sbjct: 605 RIP 607

>LRC8A_MOUSE (Q80WG5) Leucine-rich repeat-containing protein 8A|
          Length = 810

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +2

Query: 29  KLMHLLAGNAKLPSGINKMKL-LLTLSCSNIGKSTDTNIIQELSEMVSLTELELF-CNVT 202
           K++ L +  +KLP  +  + + L  LS +N G  T   ++  L +MV+LTELEL  C++ 
Sbjct: 547 KVLRLKSNLSKLPQVVTDVGVHLQKLSINNEG--TKLIVLNSLKKMVNLTELELIRCDLE 604

Query: 203 QAP 211
           + P
Sbjct: 605 RIP 607

>LAP1_CAEEL (O61967) Protein lap1 (Protein lethal-413)|
          Length = 699

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
 Frame = +2

Query: 56  AKLPSGINKMKLLLTLSCSNIGKSTDTNIIQELSEMVSLTELELFCNVTQAPGDKKQVAF 235
           AKLP  +   KLL TL   N+  +  T + + + E  S+T L L         +      
Sbjct: 95  AKLPDTMQNCKLLTTL---NLSSNPFTRLPETICECSSITILSL--------NETSLTLL 143

Query: 236 PS--GGFRSLKKLSIRCSLLSVTFVTDALSKVEVLEL-KFEEGHSEESRGVSGIQHLTGL 406
           PS  G   +L+ L  R +LL     T  LS VE+ +L + + G +E     + I  LT L
Sbjct: 144 PSNIGSLTNLRVLEARDNLLR----TIPLSIVELRKLEELDLGQNELEALPAEIGKLTSL 199

Query: 407 KHMIVEFS 430
           +   V+ +
Sbjct: 200 REFYVDIN 207

>COPG_BOVIN (P53620) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)|
          Length = 874

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -2

Query: 416 SYASGLSDAVCQTHPSTPLNGLLQTLAQALQPSIKHRSQRSLIASCTLLKAS*D 255
           SY      A+CQ   ST L  + + + QA+   +   S  +L++S  LLK S D
Sbjct: 119 SYRGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFD 172

>PBL1F_EUGGR (P84742) Photoactivated adenylate cyclase beta-subunit-like protein|
           1224-5/1F
          Length = 859

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 77  NKMKLLLTLSCSNIGKSTDTNIIQELSEMVSLTELELFCN 196
           N  + L+ +SC  +  +TD      L+E  SLTE+ + CN
Sbjct: 607 NNRRNLMPVSCGVVMLATDIGSFTSLTEESSLTEVWMICN 646

>LRC8A_HUMAN (Q8IWT6) Leucine-rich repeat-containing protein 8A|
          Length = 810

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = +2

Query: 29  KLMHLLAGNAKLPSGINKMKL-LLTLSCSNIGKSTDTNIIQELSEMVSLTELELF-CNVT 202
           K++ L +  +KLP  +  + + L  LS +N G  T   ++  L +M +LTELEL  C++ 
Sbjct: 547 KVLRLKSNLSKLPQVVTDVGVHLQKLSINNEG--TKLIVLNSLKKMANLTELELIRCDLE 604

Query: 203 QAP 211
           + P
Sbjct: 605 RIP 607

>TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1098

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
 Frame = -3

Query: 607 YITSGHRSCLLGIRCVQ--CSKTLFVDLLINAHDDHLTIRVDLLSNLLYCRSCC---CRI 443
           Y TSG     +   C++  C K+L V L ++A   ++ +        LYC+  C    ++
Sbjct: 620 YDTSGEDDININATCLKAICDKSLEVHLQVDAMYTNVKVTNICSDGTLYCQVPCKGLNKL 679

Query: 442 RIMLRKLDD-----HMLQAC 398
             +LRK++D     HM   C
Sbjct: 680 SDLLRKIEDYFHCKHMTSEC 699


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,724,190
Number of Sequences: 219361
Number of extensions: 1302422
Number of successful extensions: 3792
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3792
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)