>ESA1_USTMA (Q4P3S3) Histone acetyltransferase ESA1 (EC 2.3.1.48)|
          Length = 565

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -3

Query: 417 CVFSRLLVQWVDATKIRLARHQECKRKEPSSLVNRKRVI 301
           C F++ L +WV  T++  +R  E  +KE +S   +++VI
Sbjct: 101 CEFNKRLDEWVSGTRLITSRELEWPKKEVTSDKTKRKVI 139

>TOLB_VIBPA (Q87QT9) Protein tolB precursor|
          Length = 450

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +2

Query: 92  NRTHRXLKPALGDNTSSRKPM--VEEKWNKGDPPPTDMSGALSLSLAFPASKEQ*AGKMQ 265
           N  H  L+  + D   S +P+  V  KW    P PTD+S  +       AS  Q +GK  
Sbjct: 18  NVAHAALELVITDGIDSARPIAVVPFKWEGSQPLPTDISAVI-------ASDLQRSGKFS 70

Query: 266 P 268
           P
Sbjct: 71  P 71

>EMP3_MOUSE (O35912) Epithelial membrane protein 3 (EMP-3) (YMP protein)|
           (Hematopoietic neural membrane protein) (HNMP-1)
          Length = 163

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 111 SSQHWGTTHLLENRWLKKSGIKEIHRLLICQALCLSPLLFQHQ 239
           ++Q W  +++ EN WLK      +  L++C   CLS +LF  Q
Sbjct: 48  TTQTWACSNVSENGWLKAVQALMVLSLILC---CLSFILFMFQ 87

>EMP3_HUMAN (P54852) Epithelial membrane protein 3 (EMP-3) (YMP protein)|
           (Hematopoietic neural membrane protein) (HNMP-1)
          Length = 163

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 123 WGTTHLLENRWLKKSGIKEIHRLLICQALCLSPLLFQHQ 239
           W  +++ EN WLK   +  +  L++C   CLS +LF  Q
Sbjct: 52  WACSNVSENGWLKAVQVLMVLSLILC---CLSFILFMFQ 87

>THYX_SULAC (Q4J6F2) Thymidylate synthase thyX (EC 2.1.1.148) (TS) (TSase)|
          Length = 260

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 260 FYQPIVPLMLEKQGRETERLTYQ*AVDLLY 171
           +Y+PI P  +EK+G+E     YQ A +  Y
Sbjct: 99  YYKPITPPSIEKRGKEVVDKAYQDAYNYFY 128

>CLSPN_XENLA (Q9DF50) Claspin (xClaspin)|
          Length = 1285

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -3

Query: 408 SRLLVQWVDATKIRLARHQECKRKEPSSLVNRK---RVIPTANLRP-LCDSGCILPAYCS 241
           S+ L +  D  K  + +++  KRK P   + R+   +    A  RP L DSGC+L     
Sbjct: 154 SKSLKKQTDTNKEEIVKNKS-KRKIPKEKIKRRTKQKSKAVAEARPNLNDSGCLLTDGDL 212

Query: 240 FDAGKARERD 211
           FD G   E D
Sbjct: 213 FDNGVENEMD 222

>Y374_MYCGE (P47614) Hypothetical protein MG374|
          Length = 274

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -1

Query: 521 FFAIQYSTWVCRREHVKSSKCTLKDAICLHIDKIVVSSADSLCSGLMLQR 372
           F + + S +     +VKS  C+LKD   L++ ++ +++ + L S + L +
Sbjct: 198 FTSTKNSKFSALETYVKSKNCSLKDVHYLNVTEVPINNINQLASVVFLSK 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,236,594
Number of Sequences: 219361
Number of extensions: 1574616
Number of successful extensions: 3716
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3715
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)