| Clone Name | bags8a14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029I02, full insert sequence Length = 2166 Score = 293 bits (148), Expect = 3e-76 Identities = 265/304 (87%) Strand = Plus / Plus Query: 9 tgcatacatcctcgtcagggcttgatctacctatgaaggtggttgatatgtttggatgtg 68 ||||||| ||||| |||||||| || |||||||||||||||||||||||||| || |||| Sbjct: 1311 tgcatacttcctcttcagggctagacctacctatgaaggtggttgatatgttcggttgtg 1370 Query: 69 gattaccagtttgtgccgcttcattctcctgcatcgaggagcttgtgaaagtaaacagca 128 |||||||||||||||| ||||||||||||||||| || |||||||| ||| |||| | | Sbjct: 1371 gattaccagtttgtgctgcttcattctcctgcattgatgagcttgtaaaaataaataata 1430 Query: 129 atggacttcttttctcaacatcttctgagctcgcagatgaactcatgatgctcttcaagg 188 ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||| |||| Sbjct: 1431 atggacttcttttttcaacatcttctgagcttgccgatgaacttatgatgctctttaagg 1490 Query: 189 gatttccggaggaatgcgatacactgaaatccctgaaggatggtgcgttgagtacaggat 248 | |||||||| ||||||||| |||||||||| |||| |||||| |||| ||| || | Sbjct: 1491 ggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgccttgaatactgggt 1550 Query: 249 catcttccaaatggtcaactgaatgggaaactaacgcacttcctttggtgaaccaggtca 308 |||||||||||||||| || ||||||||| | | ||||| || |||||||||||||||| Sbjct: 1551 catcttccaaatggtcgacagaatgggaacgttatgcactccccttggtgaaccaggtca 1610 Query: 309 tagg 312 |||| Sbjct: 1611 tagg 1614
>ref|XM_470542.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 278 bits (140), Expect = 2e-71 Identities = 257/296 (86%) Strand = Plus / Plus Query: 9 tgcatacatcctcgtcagggcttgatctacctatgaaggtggttgatatgtttggatgtg 68 ||||||| ||||| |||||||| || |||||||||||||||||||||||||| || |||| Sbjct: 1058 tgcatacttcctcttcagggctagacctacctatgaaggtggttgatatgttcggttgtg 1117 Query: 69 gattaccagtttgtgccgcttcattctcctgcatcgaggagcttgtgaaagtaaacagca 128 |||||||||||||||| ||||||||||||||||| || |||||||| ||| |||| | | Sbjct: 1118 gattaccagtttgtgctgcttcattctcctgcattgatgagcttgtaaaaataaataata 1177 Query: 129 atggacttcttttctcaacatcttctgagctcgcagatgaactcatgatgctcttcaagg 188 ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||| |||| Sbjct: 1178 atggacttcttttttcaacatcttctgagcttgccgatgaacttatgatgctctttaagg 1237 Query: 189 gatttccggaggaatgcgatacactgaaatccctgaaggatggtgcgttgagtacaggat 248 | |||||||| ||||||||| |||||||||| |||| |||||| |||| ||| || | Sbjct: 1238 ggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgccttgaatactgggt 1297 Query: 249 catcttccaaatggtcaactgaatgggaaactaacgcacttcctttggtgaaccag 304 |||||||||||||||| || ||||||||| | | ||||| || |||||||||||| Sbjct: 1298 catcttccaaatggtcgacagaatgggaacgttatgcactccccttggtgaaccag 1353
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 45 aggtggttgatatgtttggatgtggattaccagtttgtgccgcttcattctcctg 99 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 21387952 aggtggttgatatgtttggatgtggattaccagtttgtgctgcttcattctcctg 21387898 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 107 gagcttgtgaaagtaaacagcaatggacttcttttctcaacatcttctgagctcgcagat 166 |||||||| |||||||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 21387783 gagcttgtaaaagtaaataataatggacttcttttctcaacatcttctgagctcgccgat 21387724 Query: 167 gaact 171 ||||| Sbjct: 21387723 gaact 21387719 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 11 catacatcctcgtcagggcttgatctacctatgaaggt 48 ||||||||||| |||||||| || |||||||||||||| Sbjct: 21388069 catacatcctcttcagggctagacctacctatgaaggt 21388032
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 45 aggtggttgatatgtttggatgtggattaccagtttgtgccgcttcattctcctg 99 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 22452 aggtggttgatatgtttggatgtggattaccagtttgtgctgcttcattctcctg 22398 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 107 gagcttgtgaaagtaaacagcaatggacttcttttctcaacatcttctgagctcgcagat 166 |||||||| |||||||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 22283 gagcttgtaaaagtaaataataatggacttcttttctcaacatcttctgagctcgccgat 22224 Query: 167 gaact 171 ||||| Sbjct: 22223 gaact 22219 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 11 catacatcctcgtcagggcttgatctacctatgaaggt 48 ||||||||||| |||||||| || |||||||||||||| Sbjct: 22569 catacatcctcttcagggctagacctacctatgaaggt 22532
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 175 gatgctcttcaagggatttccggaggaatgcgatacactgaaatccctgaaggatggtgc 234 ||||||||| ||||| |||||||| ||||||||| |||||||||| |||| |||||| Sbjct: 4205959 gatgctctttaaggggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgc 4205900 Query: 235 gttgagtacaggatcatcttccaaatggtcaactgaatgggaaactaacgcacttccttt 294 |||| ||| || ||||||||||||||||| || ||||||||| | | ||||| || || Sbjct: 4205899 cttgaatactgggtcatcttccaaatggtcgacagaatgggaacgttatgcactcccctt 4205840 Query: 295 ggtgaaccaggtc 307 ||||||||||||| Sbjct: 4205839 ggtgaaccaggtc 4205827 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 45 aggtggttgatatgtttggatgtggattaccagtttgtgccgcttcattctcctg 99 |||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 4206305 aggtggttgatatgttcggttgtggattaccagtttgtgctgcttcattctcctg 4206251 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 107 gagcttgtgaaagtaaacagcaatggacttcttttctcaacatcttctgagctcgcagat 166 |||||||| ||| |||| | |||||||||||||| ||||||||||||||||| || ||| Sbjct: 4206142 gagcttgtaaaaataaataataatggacttcttttttcaacatcttctgagcttgccgat 4206083 Query: 167 gaact 171 ||||| Sbjct: 4206082 gaact 4206078 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 9 tgcatacatcctcgtcagggcttgatctacctatgaaggt 48 ||||||| ||||| |||||||| || |||||||||||||| Sbjct: 4206422 tgcatacttcctcttcagggctagacctacctatgaaggt 4206383
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 175 gatgctcttcaagggatttccggaggaatgcgatacactgaaatccctgaaggatggtgc 234 ||||||||| ||||| |||||||| ||||||||| |||||||||| |||| |||||| Sbjct: 4206068 gatgctctttaaggggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgc 4206009 Query: 235 gttgagtacaggatcatcttccaaatggtcaactgaatgggaaactaacgcacttccttt 294 |||| ||| || ||||||||||||||||| || ||||||||| | | ||||| || || Sbjct: 4206008 cttgaatactgggtcatcttccaaatggtcgacagaatgggaacgttatgcactcccctt 4205949 Query: 295 ggtgaaccaggtc 307 ||||||||||||| Sbjct: 4205948 ggtgaaccaggtc 4205936 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 45 aggtggttgatatgtttggatgtggattaccagtttgtgccgcttcattctcctg 99 |||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 4206414 aggtggttgatatgttcggttgtggattaccagtttgtgctgcttcattctcctg 4206360 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 107 gagcttgtgaaagtaaacagcaatggacttcttttctcaacatcttctgagctcgcagat 166 |||||||| ||| |||| | |||||||||||||| ||||||||||||||||| || ||| Sbjct: 4206251 gagcttgtaaaaataaataataatggacttcttttttcaacatcttctgagcttgccgat 4206192 Query: 167 gaact 171 ||||| Sbjct: 4206191 gaact 4206187 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 9 tgcatacatcctcgtcagggcttgatctacctatgaaggt 48 ||||||| ||||| |||||||| || |||||||||||||| Sbjct: 4206531 tgcatacttcctcttcagggctagacctacctatgaaggt 4206492
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 175 gatgctcttcaagggatttccggaggaatgcgatacactgaaatccctgaaggatggtgc 234 ||||||||| ||||| |||||||| ||||||||| |||||||||| |||| |||||| Sbjct: 106596 gatgctctttaaggggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgc 106537 Query: 235 gttgagtacaggatcatcttccaaatggtcaactgaatgggaaactaacgcacttccttt 294 |||| ||| || ||||||||||||||||| || ||||||||| | | ||||| || || Sbjct: 106536 cttgaatactgggtcatcttccaaatggtcgacagaatgggaacgttatgcactcccctt 106477 Query: 295 ggtgaaccaggtc 307 ||||||||||||| Sbjct: 106476 ggtgaaccaggtc 106464 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 45 aggtggttgatatgtttggatgtggattaccagtttgtgccgcttcattctcctg 99 |||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 106942 aggtggttgatatgttcggttgtggattaccagtttgtgctgcttcattctcctg 106888 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 107 gagcttgtgaaagtaaacagcaatggacttcttttctcaacatcttctgagctcgcagat 166 |||||||| ||| |||| | |||||||||||||| ||||||||||||||||| || ||| Sbjct: 106779 gagcttgtaaaaataaataataatggacttcttttttcaacatcttctgagcttgccgat 106720 Query: 167 gaact 171 ||||| Sbjct: 106719 gaact 106715 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 9 tgcatacatcctcgtcagggcttgatctacctatgaaggt 48 ||||||| ||||| |||||||| || |||||||||||||| Sbjct: 107059 tgcatacttcctcttcagggctagacctacctatgaaggt 107020
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 175 gatgctcttcaagggatttccggaggaatgcgatacactgaaatccctgaaggatggtgc 234 ||||||||| ||||| |||||||| ||||||||| |||||||||| |||| |||||| Sbjct: 34574 gatgctctttaaggggtttccggaagaatgcgatgacttgaaatccctcaaggttggtgc 34515 Query: 235 gttgagtacaggatcatcttccaaatggtcaactgaatgggaaactaacgcacttccttt 294 |||| ||| || ||||||||||||||||| || ||||||||| | | ||||| || || Sbjct: 34514 cttgaatactgggtcatcttccaaatggtcgacagaatgggaacgttatgcactcccctt 34455 Query: 295 ggtgaaccaggtc 307 ||||||||||||| Sbjct: 34454 ggtgaaccaggtc 34442 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 45 aggtggttgatatgtttggatgtggattaccagtttgtgccgcttcattctcctg 99 |||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 34920 aggtggttgatatgttcggttgtggattaccagtttgtgctgcttcattctcctg 34866 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 107 gagcttgtgaaagtaaacagcaatggacttcttttctcaacatcttctgagctcgcagat 166 |||||||| ||| |||| | |||||||||||||| ||||||||||||||||| || ||| Sbjct: 34757 gagcttgtaaaaataaataataatggacttcttttttcaacatcttctgagcttgccgat 34698 Query: 167 gaact 171 ||||| Sbjct: 34697 gaact 34693 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 9 tgcatacatcctcgtcagggcttgatctacctatgaaggt 48 ||||||| ||||| |||||||| || |||||||||||||| Sbjct: 35037 tgcatacttcctcttcagggctagacctacctatgaaggt 34998
>ref|XM_970149.1| PREDICTED: Tribolium castaneum similar to CG18012-PA (LOC664134), mRNA Length = 1302 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 41 atgaaggtggttgatatgtttggatgtggattaccagtttgtgcc 85 ||||| ||||||||||||||||| ||||| |||||||| |||||| Sbjct: 1033 atgaaagtggttgatatgtttggttgtggtttaccagtctgtgcc 1077
>ref|XM_504760.1| Yarrowia lipolytica CLIB122, YALI0E34133g predicted mRNA Length = 1392 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 31 tgatctacctatgaaggtggttgatatgtttggatgtgg 69 |||||| || |||||||| |||||||||||||||||||| Sbjct: 1062 tgatctgcccatgaaggtcgttgatatgtttggatgtgg 1100
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 31 tgatctacctatgaaggtggttgatatgtttggatgtgg 69 |||||| || |||||||| |||||||||||||||||||| Sbjct: 4054914 tgatctgcccatgaaggtcgttgatatgtttggatgtgg 4054952
>ref|XM_623774.1| PREDICTED: Apis mellifera similar to ENSANGP00000010464 (LOC551379), mRNA Length = 1386 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 51 ttgatatgtttggatgtggattaccagtttgtgc 84 ||||||||||||| |||| ||||||||||||||| Sbjct: 1109 ttgatatgtttggttgtgaattaccagtttgtgc 1142
>ref|NM_101521.2| Arabidopsis thaliana transferase, transferring glycosyl groups AT1G16570 mRNA, complete cds Length = 1948 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 41 atgaaggtggttgatatgtttggatgtgg 69 |||||||| |||||||||||||||||||| Sbjct: 1160 atgaaggttgttgatatgtttggatgtgg 1188
>ref|XM_414707.1| PREDICTED: Gallus gallus similar to Beta-1,4-mannosyltransferase (LOC416393), mRNA Length = 1497 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 36 tacctatgaaggtggttgatatgtttggatgtggattaccagtttgtgc 84 |||||||||||||||| ||||||||||| ||| | ||||| || ||||| Sbjct: 1130 tacctatgaaggtggtagatatgtttggctgttgcttacctgtgtgtgc 1178
>gb|BT008762.1| Arabidopsis thaliana At1g16570 mRNA, complete cds Length = 1398 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 41 atgaaggtggttgatatgtttggatgtgg 69 |||||||| |||||||||||||||||||| Sbjct: 1108 atgaaggttgttgatatgtttggatgtgg 1136
>ref|XM_786391.1| PREDICTED: Strongylocentrotus purpuratus similar to beta-1,4-mannosyltransferase (LOC586617), partial mRNA Length = 842 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 35 ctacctatgaaggtggttgatatgtttgg 63 ||||||||||| ||||||||||||||||| Sbjct: 778 ctacctatgaaagtggttgatatgtttgg 806
>gb|AY128379.1| Arabidopsis thaliana unknown protein (At1g16570) mRNA, complete cds Length = 1628 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 41 atgaaggtggttgatatgtttggatgtgg 69 |||||||| |||||||||||||||||||| Sbjct: 1153 atgaaggttgttgatatgtttggatgtgg 1181
>ref|XM_632805.1| Dictyostelium discoideum beta-1,4-mannosyltransferase (DDB0191150), partial mRNA Length = 1482 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 30 ttgatctacctatgaaggtggttgatatgtttggatgtggattaccagttt 80 ||||| |||| ||||| ||||| ||||||||||| ||| | |||||||||| Sbjct: 1091 ttgatttaccaatgaaagtggtggatatgtttggttgttgtttaccagttt 1141
>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21, complete sequence Length = 243457 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 371 ttacatagtttataggtgtaatt 393 ||||||||||||||||||||||| Sbjct: 51593 ttacatagtttataggtgtaatt 51571
>gb|U65018.1|DDU65018 Dictyostelium discoideum mannosyltransferase gene, complete cds Length = 1644 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 30 ttgatctacctatgaaggtggttgatatgtttggatgtggattaccagttt 80 ||||| |||| ||||| ||||| ||||||||||| ||| | |||||||||| Sbjct: 1158 ttgatttaccaatgaaagtggtggatatgtttggttgttgtttaccagttt 1208
>emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in linkage group 15, complete sequence Length = 115533 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 451 atcagtttgcttgcaccagcat 472 |||||||||||||||||||||| Sbjct: 29287 atcagtttgcttgcaccagcat 29308
>emb|AL731532.8| Human DNA sequence from clone RP11-113E21 on chromosome 10 Contains the 3'end of a novel gene, complete sequence Length = 100443 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 ttttctcaacatcttctgagct 159 |||||||||||||||||||||| Sbjct: 63825 ttttctcaacatcttctgagct 63846
>ref|XM_755703.1| Ustilago maydis 521 hypothetical protein (UM04649.1) partial mRNA Length = 2322 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 32 gatctacctatgaaggtggttgatatgtttggatgtggatt 72 |||||||| ||||||||||| |||||| | || |||||||| Sbjct: 1408 gatctaccgatgaaggtggtggatatgctcggttgtggatt 1448
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 32 gatctacctatgaaggtggttgatatgtt 60 ||||| |||||||| |||||||||||||| Sbjct: 1040778 gatctgcctatgaaagtggttgatatgtt 1040806
>gb|AC005184.1| Homo sapiens Xp22 bins 45-47 BAC GSHB-665N22 (Genome Systems Human BAC Library) complete sequence Length = 157981 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 aataatcagatgtgcagaaag 337 ||||||||||||||||||||| Sbjct: 112524 aataatcagatgtgcagaaag 112504
>gb|AC096511.4| Homo sapiens X BAC RP11-606J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76481 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 aataatcagatgtgcagaaag 337 ||||||||||||||||||||| Sbjct: 63457 aataatcagatgtgcagaaag 63477
>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete sequence Length = 93485 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aggtggttgatatgtttggatgtgg 69 |||| |||||||||||||||||||| Sbjct: 67355 aggttgttgatatgtttggatgtgg 67379
>ref|XM_957022.1| Neurospora crassa OR74A hypothetical protein (NCU07261.1) partial mRNA Length = 1371 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 32 gatctacctatgaaggtggttgatatgtttgg 63 ||||| || ||||||||||| ||||||||||| Sbjct: 1096 gatctgcccatgaaggtggtggatatgtttgg 1127
>ref|XM_327546.1| Neurospora crassa OR74A hypothetical protein (NCU07261.1) partial mRNA Length = 1371 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 32 gatctacctatgaaggtggttgatatgtttgg 63 ||||| || ||||||||||| ||||||||||| Sbjct: 1096 gatctgcccatgaaggtggtggatatgtttgg 1127
>ref|XM_657858.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5346.2), mRNA Length = 1386 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 atgaaggtggttgatatgtt 60 |||||||||||||||||||| Sbjct: 1129 atgaaggtggttgatatgtt 1148
>gb|AC147359.2| Xenopus tropicalis clone CH216-79G22, complete sequence Length = 165587 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 atggacttcttttctcaacatctt 152 ||||||||||||| |||||||||| Sbjct: 62602 atggacttcttttatcaacatctt 62579
>gb|AC146817.10| Medicago truncatula clone mth2-8c19, complete sequence Length = 114343 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 45 aggtggttgatatgtttggatgtggattaccagtttgtgc 84 |||| |||||||||||||| |||||| | || |||||||| Sbjct: 66711 aggttgttgatatgtttggctgtggactgcctgtttgtgc 66672 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 128 aatggacttcttttctcaacatcttctgagctcgcagatgaact 171 ||||| ||||| ||||| ||||||| ||||| ||||||||||| Sbjct: 66528 aatggtcttctcttctcttcatcttcagagctagcagatgaact 66485
>gb|AC121722.4| Rattus norvegicus X BAC CH230-342C11 (Children's Hospital Oakland Research Institute) complete sequence Length = 179370 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 acttgagtgaccagatgtacattt 421 |||||||||| ||||||||||||| Sbjct: 69262 acttgagtgatcagatgtacattt 69239
>gb|AC104117.2| Homo sapiens chromosome 5 clone RP11-281O15, complete sequence Length = 211975 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 agatgtgcagaaaggatggt 343 |||||||||||||||||||| Sbjct: 158000 agatgtgcagaaaggatggt 157981
>gb|AC182257.2| Gallus gallus BAC clone CH261-84F14 from chromosome ul, complete sequence Length = 200594 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 caacatcttctgagctcgca 163 |||||||||||||||||||| Sbjct: 93237 caacatcttctgagctcgca 93256
>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete sequence Length = 250495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 caacatcttctgagctcgca 163 |||||||||||||||||||| Sbjct: 245256 caacatcttctgagctcgca 245275
>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence Length = 160810 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tggatgtggattaccagttt 80 |||||||||||||||||||| Sbjct: 92759 tggatgtggattaccagttt 92778
>emb|BX005345.12| Mouse DNA sequence from clone RP23-344C21 on chromosome X, complete sequence Length = 208344 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 acttgagtgaccagatgtacattt 421 |||||||||| ||||||||||||| Sbjct: 138802 acttgagtgatcagatgtacattt 138779
>gb|AC148372.3| Carollia perspicillata clone 102I5, complete sequence Length = 161035 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ttcttttctcaacatcttct 154 |||||||||||||||||||| Sbjct: 70891 ttcttttctcaacatcttct 70872
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ttcttttctcaacatcttct 154 |||||||||||||||||||| Sbjct: 1411359 ttcttttctcaacatcttct 1411340 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,338,165 Number of Sequences: 3902068 Number of extensions: 4338165 Number of successful extensions: 83378 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83215 Number of HSP's gapped (non-prelim): 161 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)