ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8a13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008962.1| Triticum aestivum clone wdk1c.pk012.j14:fis, full insert mRNA sequence Length = 2511 Score = 722 bits (364), Expect = 0.0 Identities = 433/452 (95%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 16 aagttccctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatctt 75 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 739 aagttccctgcctgcacattggctgccaag-aggcacattgactccaccaccaccatctt 797 Query: 76 ggatgtccagggtgtgggttttaagaatttctccaagactgcaagggagctagtacaccg 135 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 798 ggatgtccagggtgtgggtttaaagaatttctccaagactgctagggagctagtacatcg 857 Query: 136 catgcagaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaa 195 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 catgcagaagatagacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaa 917 Query: 196 tgcgggcagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaac 255 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 tgcgggcagtgggttcaagttgatctggaacagtgtgaagggcttccttgacccaaaaac 977 Query: 256 ttcatccaagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattga 315 |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| Sbjct: 978 ttcatccaagattcatgttcttggttcgaattaccagagtcgacttcttgaagtaattga 1037 Query: 316 cgcaagtgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttg 375 | ||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| Sbjct: 1038 cccaagtgagttgccagagtttcttggtggttcatgcacctgcattgacaaaggaggttg 1097 Query: 376 tcttgggtctaacaaggggccatggaatgaccctttatatccttgaagctgatacacaat 435 ||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||| Sbjct: 1098 tcttgggtctaacaaagggccatggaatgatcc-ttatat-cttgaagctgatacacaat 1155 Query: 436 ctggaagctggttctgtgagggatatcaagcc 467 ||||| |||||||||||||||||||||||||| Sbjct: 1156 ctggaggctggttctgtgagggatatcaagcc 1187
>gb|AY105073.1| Zea mays PCO065425 mRNA sequence Length = 748 Score = 406 bits (205), Expect = e-110 Identities = 372/424 (87%), Gaps = 3/424 (0%) Strand = Plus / Plus Query: 18 gttccctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttgg 77 |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 317 gttccctgcctgcacattggctgccaag-aggcacattgactcgaccactaccatcttgg 375 Query: 78 atgtccagggtgtgggttttaagaatttctccaagactgcaagggagctagtacaccgca 137 | |||||||||||||| ||||||||||||||||||||||| || || || || ||||| | Sbjct: 376 acgtccagggtgtggggtttaagaatttctccaagactgccagagaacttgtgcaccgga 435 Query: 138 tgcagaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaatg 197 |||||||||| || |||||||||||||| ||||| | || |||||||||||||| || | Sbjct: 436 tgcagaagattgatagcgactattatcccgagacactccaccaaatgtttgttgtgaacg 495 Query: 198 cgggcagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaactt 257 | || |||||||| |||| |||||||||||| ||||||||||||||||||||||| |||| Sbjct: 496 ctgggagtggatttaagtggatctggaacagcgtgaagggcttccttgacccaaagactt 555 Query: 258 catccaagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattgacg 317 |||||||||||||||| |||||||||||||| ||||| || |||||||||||||| || Sbjct: 556 catccaagattcatgtgcttggttcgaactaccagagcaggcttcttgaagtaatggatt 615 Query: 318 caagtgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttgtc 377 | |||||| ||||||| ||||| || ||||||||||| |||| ||||||||| ||||||| Sbjct: 616 cgagtgagctgccagaattccttggcggttcatgcacatgtagtgacaagggtggttgtc 675 Query: 378 ttgggtctaacaaggggccatggaatgaccctttatatccttgaagctgatacacaatct 437 |||| || ||||| |||| |||||||| || |||||| ||||||||||| |||||| | Sbjct: 676 ttggatcgaacaaanggccgtggaatgatcc-ttatat-attgaagctgatccacaattt 733 Query: 438 ggaa 441 |||| Sbjct: 734 ggaa 737
>ref|XM_483162.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2350 Score = 396 bits (200), Expect = e-107 Identities = 372/427 (87%), Gaps = 3/427 (0%) Strand = Plus / Plus Query: 22 cctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttggatgt 81 ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 860 cctgcctgcacattggcggcaaag-aggcacattgattccaccaccaccatcttggatgt 918 Query: 82 ccagggtgtgggttttaagaatttctccaagactgcaagggagctagtacaccgcatgca 141 ||||| ||||| |||||||||||||| |||||||| |||||||| | |||| ||||| Sbjct: 919 tcagggagtgggatttaagaatttctcaaagactgcgagggagcttatcaaccgaatgca 978 Query: 142 gaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaatgcggg 201 |||||| ||||| |||||||| |||||||| || |||||||||||||| || || || || Sbjct: 979 gaagatagacagtgactattaccctgagacattacatcaaatgtttgtcgtgaacgccgg 1038 Query: 202 cagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaacttcatc 261 ||| || ||||||||||||||||| || ||||||||||| || ||||||||||||||||| Sbjct: 1039 cagcgggttcaagttgatctggaatagcgtgaagggctttctggacccaaaaacttcatc 1098 Query: 262 caagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattgacgcaag 321 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | || Sbjct: 1099 caagattcatgttcttggttcgaattaccagagtagacttcttgaagtaattgattccag 1158 Query: 322 tgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttgtcttgg 381 |||||| || || ||||||||||| |||||| | || | ||||||||| ||||||||||| Sbjct: 1159 tgagttaccggacttcctcggtgggtcatgctcatgcagtgacaagggtggttgtcttgg 1218 Query: 382 gtctaacaaggggccatggaatgaccctttatatccttgaagctgatacacaatctggaa 441 ||| || || || ||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 1219 gtcgaataaaggcccatggaatgatcctttcatt--ttgaagctgatacacaatttggag 1276 Query: 442 gctggtt 448 ||||||| Sbjct: 1277 gctggtt 1283
>dbj|AK070235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046G11, full insert sequence Length = 2350 Score = 396 bits (200), Expect = e-107 Identities = 372/427 (87%), Gaps = 3/427 (0%) Strand = Plus / Plus Query: 22 cctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttggatgt 81 ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 860 cctgcctgcacattggcggcaaag-aggcacattgattccaccaccaccatcttggatgt 918 Query: 82 ccagggtgtgggttttaagaatttctccaagactgcaagggagctagtacaccgcatgca 141 ||||| ||||| |||||||||||||| |||||||| |||||||| | |||| ||||| Sbjct: 919 tcagggagtgggatttaagaatttctcaaagactgcgagggagcttatcaaccgaatgca 978 Query: 142 gaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaatgcggg 201 |||||| ||||| |||||||| |||||||| || |||||||||||||| || || || || Sbjct: 979 gaagatagacagtgactattaccctgagacattacatcaaatgtttgtcgtgaacgccgg 1038 Query: 202 cagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaacttcatc 261 ||| || ||||||||||||||||| || ||||||||||| || ||||||||||||||||| Sbjct: 1039 cagcgggttcaagttgatctggaatagcgtgaagggctttctggacccaaaaacttcatc 1098 Query: 262 caagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattgacgcaag 321 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | || Sbjct: 1099 caagattcatgttcttggttcgaattaccagagtagacttcttgaagtaattgattccag 1158 Query: 322 tgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttgtcttgg 381 |||||| || || ||||||||||| |||||| | || | ||||||||| ||||||||||| Sbjct: 1159 tgagttaccggacttcctcggtgggtcatgctcatgcagtgacaagggtggttgtcttgg 1218 Query: 382 gtctaacaaggggccatggaatgaccctttatatccttgaagctgatacacaatctggaa 441 ||| || || || ||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 1219 gtcgaataaaggcccatggaatgatcctttcatt--ttgaagctgatacacaatttggag 1276 Query: 442 gctggtt 448 ||||||| Sbjct: 1277 gctggtt 1283
>dbj|AK068384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146A10, full insert sequence Length = 1404 Score = 396 bits (200), Expect = e-107 Identities = 372/427 (87%), Gaps = 3/427 (0%) Strand = Plus / Plus Query: 22 cctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttggatgt 81 ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 822 cctgcctgcacattggcggcaaag-aggcacattgattccaccaccaccatcttggatgt 880 Query: 82 ccagggtgtgggttttaagaatttctccaagactgcaagggagctagtacaccgcatgca 141 ||||| ||||| |||||||||||||| |||||||| |||||||| | |||| ||||| Sbjct: 881 tcagggagtgggatttaagaatttctcaaagactgcgagggagcttatcaaccgaatgca 940 Query: 142 gaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaatgcggg 201 |||||| ||||| |||||||| |||||||| || |||||||||||||| || || || || Sbjct: 941 gaagatagacagtgactattaccctgagacattacatcaaatgtttgtcgtgaacgccgg 1000 Query: 202 cagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaacttcatc 261 ||| || ||||||||||||||||| || ||||||||||| || ||||||||||||||||| Sbjct: 1001 cagcgggttcaagttgatctggaatagcgtgaagggctttctggacccaaaaacttcatc 1060 Query: 262 caagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattgacgcaag 321 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | || Sbjct: 1061 caagattcatgttcttggttcgaattaccagagtagacttcttgaagtaattgattccag 1120 Query: 322 tgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttgtcttgg 381 |||||| || || ||||||||||| |||||| | || | ||||||||| ||||||||||| Sbjct: 1121 tgagttaccggacttcctcggtgggtcatgctcatgcagtgacaagggtggttgtcttgg 1180 Query: 382 gtctaacaaggggccatggaatgaccctttatatccttgaagctgatacacaatctggaa 441 ||| || || || ||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 1181 gtcgaataaaggcccatggaatgatcctttcatt--ttgaagctgatacacaatttggag 1238 Query: 442 gctggtt 448 ||||||| Sbjct: 1239 gctggtt 1245
>dbj|AK059604.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-E10, full insert sequence Length = 1986 Score = 396 bits (200), Expect = e-107 Identities = 372/427 (87%), Gaps = 3/427 (0%) Strand = Plus / Plus Query: 22 cctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttggatgt 81 ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 197 cctgcctgcacattggcggcaaag-aggcacattgattccaccaccaccatcttggatgt 255 Query: 82 ccagggtgtgggttttaagaatttctccaagactgcaagggagctagtacaccgcatgca 141 ||||| ||||| |||||||||||||| |||||||| |||||||| | |||| ||||| Sbjct: 256 tcagggagtgggatttaagaatttctcaaagactgcgagggagcttatcaaccgaatgca 315 Query: 142 gaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaatgcggg 201 |||||| ||||| |||||||| |||||||| || |||||||||||||| || || || || Sbjct: 316 gaagatagacagtgactattaccctgagacattacatcaaatgtttgtcgtgaacgccgg 375 Query: 202 cagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaacttcatc 261 ||| || ||||||||||||||||| || ||||||||||| || ||||||||||||||||| Sbjct: 376 cagcgggttcaagttgatctggaatagcgtgaagggctttctggacccaaaaacttcatc 435 Query: 262 caagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattgacgcaag 321 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | || Sbjct: 436 caagattcatgttcttggttcgaattaccagagtagacttcttgaagtaattgattccag 495 Query: 322 tgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttgtcttgg 381 |||||| || || ||||||||||| |||||| | || | ||||||||| ||||||||||| Sbjct: 496 tgagttaccggacttcctcggtgggtcatgctcatgcagtgacaagggtggttgtcttgg 555 Query: 382 gtctaacaaggggccatggaatgaccctttatatccttgaagctgatacacaatctggaa 441 ||| || || || ||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 556 gtcgaataaaggcccatggaatgatcctttcatt--ttgaagctgatacacaatttggag 613 Query: 442 gctggtt 448 ||||||| Sbjct: 614 gctggtt 620
>dbj|AK063554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E06, full insert sequence Length = 2407 Score = 305 bits (154), Expect = 7e-80 Identities = 290/334 (86%), Gaps = 1/334 (0%) Strand = Plus / Plus Query: 18 gttccctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttgg 77 ||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||| ||| Sbjct: 777 gttccctgcctgcacattggcggccaag-aggcacattgattccacaaccaccatactgg 835 Query: 78 atgtccagggtgtgggttttaagaatttctccaagactgcaagggagctagtacaccgca 137 ||||||| || ||||| | ||||||||||| ||||||||||||||||| || ||||| | Sbjct: 836 atgtccatggcgtggggctgaagaatttctcaaagactgcaagggagcttgttcaccgga 895 Query: 138 tgcagaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaatg 197 |||||||||| || || || || ||||||||||| || ||||| |||| ||| || |||| Sbjct: 896 tgcagaagatagatagtgattactatcctgagacattacatcagatgtatgtagtgaatg 955 Query: 198 cgggcagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaactt 257 | |||||||| |||||| |||| |||||||||||||| || || |||||||||||||||| Sbjct: 956 ctggcagtggcttcaagctgatatggaacagtgtgaaagggtttcttgacccaaaaactt 1015 Query: 258 catccaagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattgacg 317 | || |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 1016 cttcaaagattcatgttcttggtacaaactaccagagtagacttcttgaagtaattgaca 1075 Query: 318 caagtgagttgccagagttcctcggtggttcatg 351 |||||| ||||||||||| || || |||||||| Sbjct: 1076 aaagtgaattgccagagtttcttggcggttcatg 1109
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 176 catcaaatgtttgttgtaaatgcgggcagtggattcaagttgatctggaacagtgtgaag 235 |||||||||||||| || || || ||||| || ||||||||||||||||| || |||||| Sbjct: 24555622 catcaaatgtttgtcgtgaacgccggcagcgggttcaagttgatctggaatagcgtgaag 24555681 Query: 236 ggcttccttgacccaaaaacttcatccaagattcatgt 273 ||||| || ||||||||||||||||||||||||||||| Sbjct: 24555682 ggctttctggacccaaaaacttcatccaagattcatgt 24555719 Score = 85.7 bits (43), Expect = 1e-13 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 22 cctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttggatgt 81 ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 24555287 cctgcctgcacattggcggcaaag-aggcacattgattccaccaccaccatcttggatgt 24555345 Query: 82 ccagggtgtgg 92 ||||| |||| Sbjct: 24555346 tcagggagtgg 24555356 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 320 agtgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttgtctt 379 |||||||| || || ||||||||||| |||||| | || | ||||||||| ||||||||| Sbjct: 24555950 agtgagttaccggacttcctcggtgggtcatgctcatgcagtgacaagggtggttgtctt 24556009 Query: 380 gggtctaacaaggggccatggaatgacccttt 411 ||||| || || || ||||||||||| ||||| Sbjct: 24556010 gggtcgaataaaggcccatggaatgatccttt 24556041 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 272 gttcttggttcgaactatcagagtagacttcttgaagtaattga 315 |||||||||||||| || |||||||||||||||||||||||||| Sbjct: 24555798 gttcttggttcgaattaccagagtagacttcttgaagtaattga 24555841 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 95 tttaagaatttctccaagactgcaagggagctagtacaccgcatgcagaagatcgacagc 154 |||||||||||||| |||||||| |||||||| | |||| ||||||||||| ||||| Sbjct: 24555458 tttaagaatttctcaaagactgcgagggagcttatcaaccgaatgcagaagatagacagt 24555517 Query: 155 gactattatcctgag 169 |||||||| |||||| Sbjct: 24555518 gactattaccctgag 24555532 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 137 atgcagaagatcgacagcgactattatcctgag 169 ||||||||||| ||||| ||||||||||||||| Sbjct: 15387825 atgcagaagattgacagtgactattatcctgag 15387857 Score = 48.1 bits (24), Expect = 0.026 Identities = 81/100 (81%) Strand = Plus / Plus Query: 174 tgcatcaaatgtttgttgtaaatgcgggcagtggattcaagttgatctggaacagtgtga 233 ||||||| ||||||||||| ||||| || | ||| ||||| | ||||||| | |||| Sbjct: 15387935 tgcatcagatgtttgttgtgaatgctggtaatggtttcaaactactctggaatacagtga 15387994 Query: 234 agggcttccttgacccaaaaacttcatccaagattcatgt 273 | ||||||||||| || |||||| |||| ||||| ||||| Sbjct: 15387995 aaggcttccttgatcccaaaactgcatcaaagatacatgt 15388034
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 176 catcaaatgtttgttgtaaatgcgggcagtggattcaagttgatctggaacagtgtgaag 235 |||||||||||||| || || || ||||| || ||||||||||||||||| || |||||| Sbjct: 63882 catcaaatgtttgtcgtgaacgccggcagcgggttcaagttgatctggaatagcgtgaag 63941 Query: 236 ggcttccttgacccaaaaacttcatccaagattcatgt 273 ||||| || ||||||||||||||||||||||||||||| Sbjct: 63942 ggctttctggacccaaaaacttcatccaagattcatgt 63979 Score = 85.7 bits (43), Expect = 1e-13 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 22 cctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttggatgt 81 ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 63547 cctgcctgcacattggcggcaaag-aggcacattgattccaccaccaccatcttggatgt 63605 Query: 82 ccagggtgtgg 92 ||||| |||| Sbjct: 63606 tcagggagtgg 63616 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 320 agtgagttgccagagttcctcggtggttcatgcacctgtattgacaagggaggttgtctt 379 |||||||| || || ||||||||||| |||||| | || | ||||||||| ||||||||| Sbjct: 64210 agtgagttaccggacttcctcggtgggtcatgctcatgcagtgacaagggtggttgtctt 64269 Query: 380 gggtctaacaaggggccatggaatgacccttt 411 ||||| || || || ||||||||||| ||||| Sbjct: 64270 gggtcgaataaaggcccatggaatgatccttt 64301 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 272 gttcttggttcgaactatcagagtagacttcttgaagtaattga 315 |||||||||||||| || |||||||||||||||||||||||||| Sbjct: 64058 gttcttggttcgaattaccagagtagacttcttgaagtaattga 64101 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 95 tttaagaatttctccaagactgcaagggagctagtacaccgcatgcagaagatcgacagc 154 |||||||||||||| |||||||| |||||||| | |||| ||||||||||| ||||| Sbjct: 63718 tttaagaatttctcaaagactgcgagggagcttatcaaccgaatgcagaagatagacagt 63777 Query: 155 gactattatcctgag 169 |||||||| |||||| Sbjct: 63778 gactattaccctgag 63792
>gb|BT018827.1| Zea mays clone EL01N0551B04.d mRNA sequence Length = 1723 Score = 103 bits (52), Expect = 5e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 155 gactattatcctgagacgttgcatcaaatgtttgttgtaaatgcgggcagtggattcaag 214 ||||||||||||||||| || |||||||||||| ||||||||||||| ||| |||||| Sbjct: 23 gactattatcctgagacattacatcaaatgtttattgtaaatgcgggacctggtttcaag 82 Query: 215 ttgatctggaacagtgtgaagggcttccttgacccaaaaacttcatccaagattcatgtt 274 |||| |||| || ||| ||||| | |||||||| ||||| ||||| ||||| |||||| Sbjct: 83 ctgatatggagcactgttaagggacttcttgaccccaaaacgtcatctaagatacatgtt 142 Query: 275 cttggttcgaactatcagagtagacttcttgaagtaattgacgcaagtgagttgccagag 334 || || | || ||||| || ||||||||||||| ||||| ||||| | || |||||| Sbjct: 143 ctaggaacaaaatatcaaagcagacttcttgaagctattgatgcaagccaattaccagag 202 Query: 335 ttcctcggtggttcatgcac 354 | | | |||||||| ||||| Sbjct: 203 tactttggtggttcgtgcac 222
>ref|XM_481769.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2758 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 137 atgcagaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaat 196 ||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||| ||| Sbjct: 1118 atgcagaagattgacagtgactattatcctgagacactgcatcagatgtttgttgtgaat 1177 Query: 197 gcgggcagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaact 256 || || | ||| ||||| | ||||||| | ||||| ||||||||||| || |||||| Sbjct: 1178 gctggtaatggtttcaaactactctggaatacagtgaaaggcttccttgatcccaaaact 1237 Query: 257 tcatccaagattcatgtt 274 |||| ||||| |||||| Sbjct: 1238 gcatcaaagatacatgtt 1255
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 176 catcaaatgtttgttgtaaatgcgggcagtggattcaagttgatctggaacagtgtgaag 235 ||||| |||| ||| || ||||| |||||||| |||||| |||| |||||||||||||| Sbjct: 18411450 catcagatgtatgtagtgaatgctggcagtggcttcaagctgatatggaacagtgtgaaa 18411509 Query: 236 ggcttccttgacccaaaaacttcatccaagattcatgt 273 || || ||||||||||||||||| || ||||||||||| Sbjct: 18411510 gggtttcttgacccaaaaacttcttcaaagattcatgt 18411547 Score = 77.8 bits (39), Expect = 3e-11 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 18 gttccctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttgg 77 ||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||| ||| Sbjct: 18411075 gttccctgcctgcacattggcggccaag-aggcacattgattccacaaccaccatactgg 18411133 Query: 78 atgtcca 84 ||||||| Sbjct: 18411134 atgtcca 18411140 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 98 aagaatttctccaagactgcaagggagctagtacaccgcatgcagaagatcgacagcgac 157 ||||||||||| ||||||||||||||||| || ||||| ||||||||||| || || || Sbjct: 18411292 aagaatttctcaaagactgcaagggagcttgttcaccggatgcagaagatagatagtgat 18411351 Query: 158 tattatcctgag 169 || ||||||||| Sbjct: 18411352 tactatcctgag 18411363 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 272 gttcttggttcgaactatcagagtagacttcttgaagtaattgac 316 ||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 18411628 gttcttggtacaaactaccagagtagacttcttgaagtaattgac 18411672
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 176 catcaaatgtttgttgtaaatgcgggcagtggattcaagttgatctggaacagtgtgaag 235 ||||| |||| ||| || ||||| |||||||| |||||| |||| |||||||||||||| Sbjct: 126186 catcagatgtatgtagtgaatgctggcagtggcttcaagctgatatggaacagtgtgaaa 126245 Query: 236 ggcttccttgacccaaaaacttcatccaagattcatgt 273 || || ||||||||||||||||| || ||||||||||| Sbjct: 126246 gggtttcttgacccaaaaacttcttcaaagattcatgt 126283 Score = 77.8 bits (39), Expect = 3e-11 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 18 gttccctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttgg 77 ||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||| ||| Sbjct: 125811 gttccctgcctgcacattggcggccaag-aggcacattgattccacaaccaccatactgg 125869 Query: 78 atgtcca 84 ||||||| Sbjct: 125870 atgtcca 125876 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 98 aagaatttctccaagactgcaagggagctagtacaccgcatgcagaagatcgacagcgac 157 ||||||||||| ||||||||||||||||| || ||||| ||||||||||| || || || Sbjct: 126028 aagaatttctcaaagactgcaagggagcttgttcaccggatgcagaagatagatagtgat 126087 Query: 158 tattatcctgag 169 || ||||||||| Sbjct: 126088 tactatcctgag 126099 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 272 gttcttggttcgaactatcagagtagacttcttgaagtaattgac 316 ||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 126364 gttcttggtacaaactaccagagtagacttcttgaagtaattgac 126408
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 176 catcaaatgtttgttgtaaatgcgggcagtggattcaagttgatctggaacagtgtgaag 235 ||||| |||| ||| || ||||| |||||||| |||||| |||| |||||||||||||| Sbjct: 73324 catcagatgtatgtagtgaatgctggcagtggcttcaagctgatatggaacagtgtgaaa 73383 Query: 236 ggcttccttgacccaaaaacttcatccaagattcatgt 273 || || ||||||||||||||||| || ||||||||||| Sbjct: 73384 gggtttcttgacccaaaaacttcttcaaagattcatgt 73421 Score = 77.8 bits (39), Expect = 3e-11 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 18 gttccctgcctgcacattggctgccaagnaggcacattgactccaccaccaccatcttgg 77 ||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||| ||| Sbjct: 72949 gttccctgcctgcacattggcggccaag-aggcacattgattccacaaccaccatactgg 73007 Query: 78 atgtcca 84 ||||||| Sbjct: 73008 atgtcca 73014 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 98 aagaatttctccaagactgcaagggagctagtacaccgcatgcagaagatcgacagcgac 157 ||||||||||| ||||||||||||||||| || ||||| ||||||||||| || || || Sbjct: 73166 aagaatttctcaaagactgcaagggagcttgttcaccggatgcagaagatagatagtgat 73225 Query: 158 tattatcctgag 169 || ||||||||| Sbjct: 73226 tactatcctgag 73237 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 272 gttcttggttcgaactatcagagtagacttcttgaagtaattgac 316 ||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 73502 gttcttggtacaaactaccagagtagacttcttgaagtaattgac 73546
>dbj|AK072532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127L07, full insert sequence Length = 2759 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 137 atgcagaagatcgacagcgactattatcctgagacgttgcatcaaatgtttgttgtaaat 196 ||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||| ||| Sbjct: 1118 atgcagaagattgacagtgactattatcctgagacactgcatcagatgtttgttgtgaat 1177 Query: 197 gcgggcagtggattcaagttgatctggaacagtgtgaagggcttccttgacccaaaaact 256 || || | ||| ||||| | ||||||| | ||||| ||||||||||| || |||||| Sbjct: 1178 gctggtaatggtttcaaactactctggaatacagtgaaaggcttccttgatcccaaaact 1237 Query: 257 tcatccaagattcatgtt 274 |||| ||||| |||||| Sbjct: 1238 gcatcaaagatacatgtt 1255
>gb|BT009492.1| Triticum aestivum clone wr1.pk0068.h1:fis, full insert mRNA sequence Length = 1747 Score = 69.9 bits (35), Expect = 7e-09 Identities = 134/167 (80%) Strand = Plus / Plus Query: 155 gactattatcctgagacgttgcatcaaatgtttgttgtaaatgcgggcagtggattcaag 214 ||||||||||||||||| | ||||||||||| |||||||||| || ||| ||||| Sbjct: 168 gactattatcctgagacactacatcaaatgttcattgtaaatgctggagctggtttcaaa 227 Query: 215 ttgatctggaacagtgtgaagggcttccttgacccaaaaacttcatccaagattcatgtt 274 ||||||||| || | | ||||| | |||||||| ||||| ||||| || ||||||||| Sbjct: 228 ctgatctggagcactataaagggacttcttgaccccaaaacatcatcaaaaattcatgtt 287 Query: 275 cttggttcgaactatcagagtagacttcttgaagtaattgacgcaag 321 || || | || || ||||| || |||||||||| ||||||||||| Sbjct: 288 ctaggagcaaaataccagagcaggcttcttgaagctattgacgcaag 334
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 137 atgcagaagatcgacagcgactattatcctgag 169 ||||||||||| ||||| ||||||||||||||| Sbjct: 73401 atgcagaagattgacagtgactattatcctgag 73433 Score = 48.1 bits (24), Expect = 0.026 Identities = 81/100 (81%) Strand = Plus / Plus Query: 174 tgcatcaaatgtttgttgtaaatgcgggcagtggattcaagttgatctggaacagtgtga 233 ||||||| ||||||||||| ||||| || | ||| ||||| | ||||||| | |||| Sbjct: 73511 tgcatcagatgtttgttgtgaatgctggtaatggtttcaaactactctggaatacagtga 73570 Query: 234 agggcttccttgacccaaaaacttcatccaagattcatgt 273 | ||||||||||| || |||||| |||| ||||| ||||| Sbjct: 73571 aaggcttccttgatcccaaaactgcatcaaagatacatgt 73610
>ref|XM_467526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2753 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 158 tattatcctgagacgttgcatcaaatgtttgttgtaaatgcggg 201 |||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 1108 tattatcctgagacactacatcaaatgttcattgtaaatgcggg 1151
>dbj|AK100043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152L11, full insert sequence Length = 2753 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 158 tattatcctgagacgttgcatcaaatgtttgttgtaaatgcggg 201 |||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 1108 tattatcctgagacactacatcaaatgttcattgtaaatgcggg 1151
>gb|BT013561.1| Lycopersicon esculentum clone 132298F, mRNA sequence Length = 2133 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 260 tccaagattcatgttcttggttcgaactatcagagtagacttcttgaagtaattgacgca 319 |||||||| ||||||||||| || ||||||| || | | |||||| ||||||| || Sbjct: 915 tccaagatacatgttcttgggaacaagtatcagaataaattgcttgaaataattgatgct 974 Query: 320 agtgagttgccagagttcctcggtggt 346 |||||||||||||| ||| | |||||| Sbjct: 975 agtgagttgccagatttcataggtggt 1001
>gb|AF366900.1|AF366900 Lotus japonicus nonfunctional phosphatidylinositol transfer-like protein PLP-I (LjPLP-I) mRNA, complete sequence Length = 1989 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 238 cttccttgacccaaaaacttcatccaagattcatgttcttggt 280 ||||||||| ||||| || |||||||||| |||||||||||| Sbjct: 806 cttccttgatccaaagaccacatccaagatccatgttcttggt 848
>gb|AF367433.1|AF367433 Lotus japonicus phosphatidylinositol transfer-like protein III (LjPLP-III) mRNA, complete cds Length = 2256 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 302 cttgaagtaattgacgcaagtgagttgccagagtt 336 |||||||||||||| || ||||||||||| ||||| Sbjct: 992 cttgaagtaattgatgccagtgagttgcccgagtt 1026
>emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chromosome 1p34.3-36.11, complete sequence Length = 80387 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 gacccaaaaacttcatccaaga 266 |||||||||||||||||||||| Sbjct: 39212 gacccaaaaacttcatccaaga 39233
>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence Length = 81252 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 aactatcagagtagacttcttg 305 |||||||||||||||||||||| Sbjct: 48897 aactatcagagtagacttcttg 48876
>ref|NM_127192.1| Arabidopsis thaliana transporter AT2G16380 mRNA, complete cds Length = 2041 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 ||||| || |||||||| |||| ||||||||||||||||| Sbjct: 885 ttcctcgatccaaaaacgacatcaaagattcatgttcttgg 925
>ref|NM_120078.2| Arabidopsis thaliana SEC14 AT4G39180 (SEC14) mRNA, complete cds Length = 2321 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 |||||||||||||| ||| || | |||||||| |||||||| Sbjct: 1235 ttccttgacccaaagactacagcaaagattcacgttcttgg 1275
>ref|NM_127375.1| Arabidopsis thaliana transporter AT2G18180 mRNA, complete cds Length = 1677 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 |||||||||||||| ||| || | ||||| ||||||||||| Sbjct: 766 ttccttgacccaaagactacagcaaagatccatgttcttgg 806
>gb|BT018660.1| Zea mays clone EL01N0509A01.d mRNA sequence Length = 1796 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 ||||| || ||||||||| | |||||||| ||||||||||| Sbjct: 531 ttcctcgatccaaaaactgcttccaagatccatgttcttgg 571
>ref|XM_793177.1| PREDICTED: Strongylocentrotus purpuratus similar to papillary renal cell carcinoma translocation-associated gene product (LOC593707), mRNA Length = 1014 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 attgactccaccaccaccatc 73 ||||||||||||||||||||| Sbjct: 267 attgactccaccaccaccatc 247
>gb|BT009128.1| Triticum aestivum clone wl1n.pk0024.g3:fis, full insert mRNA sequence Length = 1341 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 ||||| || ||||||||| | |||||||| ||||||||||| Sbjct: 32 ttcctcgatccaaaaactgcttccaagatccatgttcttgg 72
>ref|XM_778195.1| PREDICTED: Strongylocentrotus purpuratus similar to Proline-rich protein PRCC (Papillary renal cell carcinoma translocation associated gene protein) (LOC578002), mRNA Length = 1686 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 attgactccaccaccaccatc 73 ||||||||||||||||||||| Sbjct: 855 attgactccaccaccaccatc 835
>gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F14 map mi398, complete sequence Length = 114418 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 ||||| || |||||||| |||| ||||||||||||||||| Sbjct: 58309 ttcctcgatccaaaaacgacatcaaagattcatgttcttgg 58269
>gb|AF439836.1|AF439836 Arabidopsis thaliana At2g16380/F16F14.12 mRNA, complete cds Length = 2041 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 ||||| || |||||||| |||| ||||||||||||||||| Sbjct: 885 ttcctcgatccaaaaacgacatcaaagattcatgttcttgg 925
>dbj|AK117291.1| Arabidopsis thaliana At4g39180 mRNA for SEC14 - like protein(At4g39180), complete cds, clone: RAFL16-84-P13 Length = 2426 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 |||||||||||||| ||| || | |||||||| |||||||| Sbjct: 1340 ttccttgacccaaagactacagcaaagattcacgttcttgg 1380
>gb|AY108714.1| Zea mays PCO089133 mRNA sequence Length = 2292 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 239 ttccttgacccaaaaacttcatccaagattcatgttcttgg 279 ||||| || ||||||||| | |||||||| ||||||||||| Sbjct: 920 ttcctcgatccaaaaactgcttccaagatccatgttcttgg 960
>ref|NM_020301.1| Rattus norvegicus a disintegrin and metalloprotease domain 7 (Adam7), mRNA Length = 3586 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ctatcagagtagacttcttg 305 |||||||||||||||||||| Sbjct: 593 ctatcagagtagacttcttg 574
>ref|XM_426456.1| PREDICTED: Gallus gallus similar to Leucine-rich repeat transmembrane protein FLRT2 precursor (Fibronectin-like domain-containing leucine-rich transmembrane protein 2) (UNQ232/PRO265) (LOC428901), mRNA Length = 1989 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 acacaatctggaagctggtt 448 |||||||||||||||||||| Sbjct: 1837 acacaatctggaagctggtt 1818
>gb|AC163095.6| Mus musculus chromosome 18, clone RP23-208G10, complete sequence Length = 181707 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ttctccaagactgcaaggga 123 |||||||||||||||||||| Sbjct: 164957 ttctccaagactgcaaggga 164938
>gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete sequence Length = 135959 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 ttgactccaccaccaccatc 73 |||||||||||||||||||| Sbjct: 116475 ttgactccaccaccaccatc 116494
>emb|X66140.1|RNEAPI R.norvegicus mRNA for epididymal apical protein I Length = 3586 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ctatcagagtagacttcttg 305 |||||||||||||||||||| Sbjct: 593 ctatcagagtagacttcttg 574
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 6.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 235 gggcttccttgacccaaaaacttcatcc 262 ||||||||||| |||||||||||||||| Sbjct: 1403169 gggcttccttg-cccaaaaacttcatcc 1403195
>emb|BX547993.5| Zebrafish DNA sequence from clone CH211-282E16 in linkage group 19, complete sequence Length = 108908 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tgacccaaaaacttcatcca 263 |||||||||||||||||||| Sbjct: 106026 tgacccaaaaacttcatcca 106007
>gb|AC079098.5| Homo sapiens chromosome 8, clone RP11-157N24, complete sequence Length = 158119 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ctttatatccttgaagctga 427 |||||||||||||||||||| Sbjct: 12726 ctttatatccttgaagctga 12707
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 cagagtagacttcttgaagtaatt 313 ||||||| |||||||||||||||| Sbjct: 6822817 cagagtacacttcttgaagtaatt 6822840
>gb|AC084493.1|CBRG08J21 Caenorhabditis briggsae cosmid G08J21, complete sequence Length = 22787 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cattgactccaccaccacca 71 |||||||||||||||||||| Sbjct: 1953 cattgactccaccaccacca 1972
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 cagagtagacttcttgaagtaatt 313 ||||||| |||||||||||||||| Sbjct: 40543 cagagtacacttcttgaagtaatt 40566
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gcagaagatcgacagcgact 158 |||||||||||||||||||| Sbjct: 1354035 gcagaagatcgacagcgact 1354016
>gb|AC121263.8| Mus musculus chromosome 18, clone RP24-219I3, complete sequence Length = 169528 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ttctccaagactgcaaggga 123 |||||||||||||||||||| Sbjct: 76292 ttctccaagactgcaaggga 76273 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,105,317 Number of Sequences: 3902068 Number of extensions: 4105317 Number of successful extensions: 91055 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 90784 Number of HSP's gapped (non-prelim): 252 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
