ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RS8_ORYSA (P49199) 40S ribosomal protein S8 159 2e-39
2RS8_PRUAR (O81361) 40S ribosomal protein S8 159 2e-39
3RS8_MAIZE (Q08069) 40S ribosomal protein S8 159 2e-39
4RS8_ARATH (Q9FIF3) 40S ribosomal protein S8 149 1e-36
5RS8_ICTPU (Q90YR6) 40S ribosomal protein S8 118 4e-27
6RS8_RAT (P62243) 40S ribosomal protein S8 115 3e-26
7RS8_MOUSE (P62242) 40S ribosomal protein S8 115 3e-26
8RS8_MACFA (Q4R6P8) 40S ribosomal protein S8 115 3e-26
9RS8_HUMAN (P62241) 40S ribosomal protein S8 115 3e-26
10RS8_BOVIN (Q5E958) 40S ribosomal protein S8 115 3e-26
11RS8_SPOFR (Q8WQI5) 40S ribosomal protein S8 114 6e-26
12RS8_APIME (O76756) 40S ribosomal protein S8 112 2e-25
13RS8_DROME (Q8MLY8) 40S ribosomal protein S8 111 4e-25
14RS8_BRARE (P62247) 40S ribosomal protein S8 111 4e-25
15RS8_XENLA (Q7SYU0) 40S ribosomal protein S8 111 5e-25
16RS8_LEIMA (P25204) 40S ribosomal protein S8 102 2e-22
17RS8_YEAST (P05754) 40S ribosomal protein S8 (S14) (YS9) (RP19) 98 4e-21
18RS8B_SCHPO (Q9P7B2) 40S ribosomal protein S8-B 98 4e-21
19RS8A_SCHPO (O14049) 40S ribosomal protein S8-A 98 6e-21
20RS8_THEPA (Q4N3P0) 40S ribosomal protein S8 97 7e-21
21RS8_GRIJA (Q9ZT56) 40S ribosomal protein S8 96 2e-20
22RS8_THEAN (Q4UFS9) 40S ribosomal protein S8 96 2e-20
23RS8_CAEEL (P48156) 40S ribosomal protein S8 94 6e-20
24KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-as... 30 1.9
25KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-as... 30 1.9
26KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-as... 29 3.2
27KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-a... 28 4.2
28KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-a... 28 4.2
29KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-as... 28 5.5
30DP13A_MOUSE (Q8K3H0) DCC-interacting protein 13 alpha (Dip13 alp... 28 5.5
31KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-as... 28 5.5
32KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-as... 28 5.5
33CHD3_DROME (O16102) Chromodomain helicase-DNA-binding protein 3 ... 28 5.5
34KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-as... 28 5.5
35MT1X_HUMAN (P80297) Metallothionein-1X (MT-1X) (Metallothionein-... 28 7.2
36NU2M_PICCA (P48906) NADH-ubiquinone oxidoreductase chain 2 (EC 1... 27 9.3
37PBP2_STRR6 (P0A3M6) Penicillin-binding protein 2B 27 9.3
38PBP2_STRPN (P0A3M5) Penicillin-binding protein 2B 27 9.3

>RS8_ORYSA (P49199) 40S ribosomal protein S8|
          Length = 220

 Score =  159 bits (402), Expect = 2e-39
 Identities = 84/121 (69%), Positives = 89/121 (73%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           +LDVVYN+SNNELVRTQTLVK+AIVQVDAAPFKQWYLTHYGV+IGR              
Sbjct: 79  ILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR-----KKKEPPHPR 133

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         KKSN V RKLEKRQQGRTLD+HIEEQF  GRLLACISSRPGQCGRA
Sbjct: 134 GCCGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRA 193

Query: 363 D 365
           D
Sbjct: 194 D 194



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>RS8_PRUAR (O81361) 40S ribosomal protein S8|
          Length = 221

 Score =  159 bits (402), Expect = 2e-39
 Identities = 83/121 (68%), Positives = 88/121 (72%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           LLDVVYN+SNNELVRTQTLVK+AIVQVDAAPFKQWYL HYGVEIGR              
Sbjct: 79  LLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR------KKKTAAAK 132

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         KKSN V  KLEKRQQGRTLD+HIEEQF GG+LLACISSRPGQCG+A
Sbjct: 133 KDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKA 192

Query: 363 D 365
           D
Sbjct: 193 D 193



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>RS8_MAIZE (Q08069) 40S ribosomal protein S8|
          Length = 221

 Score =  159 bits (401), Expect = 2e-39
 Identities = 82/121 (67%), Positives = 88/121 (72%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           +LDVVYN+SNNELVRTQTLVK+AIVQVDAAPFKQWYLTHYGV+IGR              
Sbjct: 79  ILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR----KKKTPAAKKD 134

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         KKSN V RKLEKR++GRTLD HIEEQF  GRLLACISSRPGQCGRA
Sbjct: 135 NAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRA 194

Query: 363 D 365
           D
Sbjct: 195 D 195



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>RS8_ARATH (Q9FIF3) 40S ribosomal protein S8|
          Length = 210

 Score =  149 bits (377), Expect = 1e-36
 Identities = 79/121 (65%), Positives = 86/121 (71%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           +LDV YN+SNNELVRTQTLVK+AIVQVDAAPFKQ YL HYGV+IGR              
Sbjct: 79  ILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGRKKKGEAVTTEEV-- 136

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         KKSN VQRKLE RQ+GR LDSH+EEQFS GRLLACI+SRPGQCGRA
Sbjct: 137 --------------KKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRA 182

Query: 363 D 365
           D
Sbjct: 183 D 183



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>RS8_ICTPU (Q90YR6) 40S ribosomal protein S8|
          Length = 207

 Score =  118 bits (295), Expect = 4e-27
 Identities = 58/121 (47%), Positives = 78/121 (64%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN ++ VD+APF+QWY +HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S KVQ+K +KR++   +   ++EQF  G+LLACISSRPGQCGRA
Sbjct: 125 GAKLTPEEEDILNKKRSKKVQKKFDKRRKNSKISPLLDEQFQQGKLLACISSRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_RAT (P62243) 40S ribosomal protein S8|
          Length = 207

 Score =  115 bits (288), Expect = 3e-26
 Identities = 56/121 (46%), Positives = 78/121 (64%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN IV +D+ P++QWY +HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K+Q+K ++R++   + S +EEQF  G+LLACI+SRPGQCGRA
Sbjct: 125 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_MOUSE (P62242) 40S ribosomal protein S8|
          Length = 207

 Score =  115 bits (288), Expect = 3e-26
 Identities = 56/121 (46%), Positives = 78/121 (64%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN IV +D+ P++QWY +HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K+Q+K ++R++   + S +EEQF  G+LLACI+SRPGQCGRA
Sbjct: 125 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_MACFA (Q4R6P8) 40S ribosomal protein S8|
          Length = 207

 Score =  115 bits (288), Expect = 3e-26
 Identities = 56/121 (46%), Positives = 78/121 (64%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN IV +D+ P++QWY +HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K+Q+K ++R++   + S +EEQF  G+LLACI+SRPGQCGRA
Sbjct: 125 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_HUMAN (P62241) 40S ribosomal protein S8|
          Length = 207

 Score =  115 bits (288), Expect = 3e-26
 Identities = 56/121 (46%), Positives = 78/121 (64%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN IV +D+ P++QWY +HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K+Q+K ++R++   + S +EEQF  G+LLACI+SRPGQCGRA
Sbjct: 125 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_BOVIN (Q5E958) 40S ribosomal protein S8|
          Length = 207

 Score =  115 bits (288), Expect = 3e-26
 Identities = 56/121 (46%), Positives = 78/121 (64%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN IV +D+ P++QWY +HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K+Q+K ++R++   + S +EEQF  G+LLACI+SRPGQCGRA
Sbjct: 125 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_SPOFR (Q8WQI5) 40S ribosomal protein S8|
          Length = 208

 Score =  114 bits (285), Expect = 6e-26
 Identities = 60/121 (49%), Positives = 76/121 (62%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKNAIV VDA PF+QWY +HY + +GR              
Sbjct: 78  IIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGR------------KK 125

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K  +K   RQ+   ++S +EEQF  GRLLAC++SRPGQCGRA
Sbjct: 126 GAKLTEAEDAIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRLLACVASRPGQCGRA 185

Query: 363 D 365
           D
Sbjct: 186 D 186



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>RS8_APIME (O76756) 40S ribosomal protein S8|
          Length = 207

 Score =  112 bits (280), Expect = 2e-25
 Identities = 58/121 (47%), Positives = 75/121 (61%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKNAIV +DA PF+QWY  HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGR------------KR 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K + K + RQ+   ++  +EEQF+ GR+LACISSRPGQCGR 
Sbjct: 125 GAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQCGRE 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_DROME (Q8MLY8) 40S ribosomal protein S8|
          Length = 208

 Score =  111 bits (278), Expect = 4e-25
 Identities = 57/121 (47%), Positives = 76/121 (62%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           + DVVYN+SNNELVRT+TLVKN+IV +DA PF+QWY  HY + +GR              
Sbjct: 78  IADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGR----------KRNP 127

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S KV +K  +RQ+   ++  +E+QF+ GR+LACISSRPGQCGR+
Sbjct: 128 KHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRS 187

Query: 363 D 365
           D
Sbjct: 188 D 188



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>RS8_BRARE (P62247) 40S ribosomal protein S8|
          Length = 207

 Score =  111 bits (278), Expect = 4e-25
 Identities = 57/121 (47%), Positives = 75/121 (61%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN +V VD+ P++QWY +HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S KVQ+K   R++   +   +EEQF  G+LLACISSRPGQCGRA
Sbjct: 125 GAKLTPEEEEILNKKRSKKVQKKFTLRRKTAKISPLLEEQFLQGKLLACISSRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_XENLA (Q7SYU0) 40S ribosomal protein S8|
          Length = 207

 Score =  111 bits (277), Expect = 5e-25
 Identities = 56/121 (46%), Positives = 75/121 (61%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+SNNELVRT+TLVKN I+ VD+ PF+QW+  HY + +GR              
Sbjct: 77  IIDVVYNASNNELVRTKTLVKNCILLVDSTPFRQWFEAHYALPLGR------------KK 124

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S K Q+K E+R++   +   +EEQF  G+LLACI+SRPGQCGRA
Sbjct: 125 GAKLTPEEEEILNKKRSKKTQKKYEERKKTAKISPLLEEQFQQGKLLACIASRPGQCGRA 184

Query: 363 D 365
           D
Sbjct: 185 D 185



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>RS8_LEIMA (P25204) 40S ribosomal protein S8|
          Length = 220

 Score =  102 bits (255), Expect = 2e-22
 Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           LLDVVYN+++NELVRT+TLVKN IV VDAAPFK+WY  HYG+++                
Sbjct: 78  LLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKK 137

Query: 183 XXXXXXXXXXXXXXKK-SNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGR 359
                          K S K+QR+  +R++   ++  I +Q   GR+LA I+SRPGQ GR
Sbjct: 138 GRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGR 197

Query: 360 AD 365
           AD
Sbjct: 198 AD 199



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>RS8_YEAST (P05754) 40S ribosomal protein S8 (S14) (YS9) (RP19)|
          Length = 199

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 53/118 (44%), Positives = 63/118 (53%)
 Frame = +3

Query: 12  VVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXXXXX 191
           VVY+ SNNELVRT TL K AIVQ+DA PF+QW+  HYG  +G+                 
Sbjct: 80  VVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQTLGKKKNVKEEETVA------ 133

Query: 192 XXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRAD 365
                       KS   +RK   R     ++S +E QFS GRL ACISSRPGQ GR D
Sbjct: 134 ------------KSKNAERKWAARAASAKIESSVESQFSAGRLYACISSRPGQSGRCD 179



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>RS8B_SCHPO (Q9P7B2) 40S ribosomal protein S8-B|
          Length = 200

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 54/121 (44%), Positives = 66/121 (54%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++ V Y+ SNNELVRT TL K+AIVQ+DAAPF+ WY THYG+ +G               
Sbjct: 78  IIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------- 122

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                          KS  VQRK   R     +DS +E QF+ GRL A +SSRPGQ GR 
Sbjct: 123 ---SKGKKATATPTPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRC 179

Query: 363 D 365
           D
Sbjct: 180 D 180



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>RS8A_SCHPO (O14049) 40S ribosomal protein S8-A|
          Length = 200

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 54/121 (44%), Positives = 66/121 (54%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++ V Y+ SNNELVRT TL K+AIVQ+DAAPF+ WY THYG+ +G               
Sbjct: 78  IIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------- 122

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                          KS  VQRK   R     +DS +E QF+ GRL A +SSRPGQ GR 
Sbjct: 123 ---SKGKKATSTPNPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRC 179

Query: 363 D 365
           D
Sbjct: 180 D 180



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>RS8_THEPA (Q4N3P0) 40S ribosomal protein S8|
          Length = 188

 Score = 97.4 bits (241), Expect = 7e-21
 Identities = 56/121 (46%), Positives = 70/121 (57%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+S+NELVRT+TLVKNAIV VD  PFK W+ THYG+E+G               
Sbjct: 78  VMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELG--------------- 122

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                          KS++  +  EK      +   + +QFS GRLLACISSRPGQCGR 
Sbjct: 123 ---------------KSSEDPQASEK--VAALVPRTLLDQFSSGRLLACISSRPGQCGRC 165

Query: 363 D 365
           D
Sbjct: 166 D 166



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>RS8_GRIJA (Q9ZT56) 40S ribosomal protein S8|
          Length = 204

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 56/122 (45%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           +L+VVYN+SNNELVRT T VK  I+Q+DA PF+Q+Y  HYG++IG+              
Sbjct: 78  ILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGK-------------- 123

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGR-TLDSHIEEQFSGGRLLACISSRPGQCGR 359
                         K S +   K EKR Q R  LD  I+E F  GRL A I+SRPGQ GR
Sbjct: 124 ------KKAGDEESKFSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGR 177

Query: 360 AD 365
           AD
Sbjct: 178 AD 179



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>RS8_THEAN (Q4UFS9) 40S ribosomal protein S8|
          Length = 184

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 57/121 (47%), Positives = 67/121 (55%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++DVVYN+S+NELVRT+TLVKNAIV VD  PFK W+ THYGVE+                
Sbjct: 78  VMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGVEL---------------- 121

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         + S KV   + K          + EQFS GRLLACISSRPGQCGR 
Sbjct: 122 -----------EDPQASEKVAGLVPKT---------LLEQFSSGRLLACISSRPGQCGRC 161

Query: 363 D 365
           D
Sbjct: 162 D 162



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>RS8_CAEEL (P48156) 40S ribosomal protein S8|
          Length = 208

 Score = 94.4 bits (233), Expect = 6e-20
 Identities = 50/121 (41%), Positives = 71/121 (58%)
 Frame = +3

Query: 3   LLDVVYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHYGVEIGRXXXXXXXXXXXXXX 182
           ++D +YN++NNELVRT+TLVK AI+ VDAAPF+QWY  HY + + R              
Sbjct: 78  IVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLAR------------KK 125

Query: 183 XXXXXXXXXXXXXXKKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCGRA 362
                         K+S+   +K  +RQ+   +D+ + EQF+ GRLLA ISS PGQ G+A
Sbjct: 126 NAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARISSSPGQVGQA 185

Query: 363 D 365
           +
Sbjct: 186 N 186



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>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated|
           protein 10.3) (High sulfur keratin-associated protein
           10.3) (Keratin-associated protein 18-3)
           (Keratin-associated protein 18.3)
          Length = 221

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CCPFQAVVP 112
           +P C  Q   Q AC  S PC++  C   CC     VP
Sbjct: 76  TPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVP 112



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>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated|
           protein 10.2) (High sulfur keratin-associated protein
           10.2) (Keratin-associated protein 18-2)
           (Keratin-associated protein 18.2)
          Length = 255

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CCPFQAVVP 112
           +P C  Q   Q AC  S PC++  C   CC     VP
Sbjct: 76  TPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVP 112



 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CC 91
           S  C  Q   Q AC  S PC++  C S CC
Sbjct: 159 SSSCCQQSSCQPACCTSSPCQQSCCVSVCC 188



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>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CCPFQAVVP 112
           +P C  Q   Q AC  S PC++  C   CC      P
Sbjct: 95  TPSCCQQSSCQPACCTSSPCQQACCVPVCCKSNCCKP 131



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>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated|
           protein 10.12) (High sulfur keratin-associated protein
           10.12) (Keratin-associated protein 18-12)
           (Keratin-associated protein 18.12)
          Length = 245

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CC 91
           +P C  Q   Q AC  S PC++  C   CC
Sbjct: 81  TPSCCQQSSCQPACCTSSPCQQACCVPVCC 110



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>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated|
           protein 10.11) (High sulfur keratin-associated protein
           10.11) (Keratin-associated protein 18-11)
           (Keratin-associated protein 18.11)
          Length = 298

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CC 91
           +P C  Q   Q AC  S PC++  C   CC
Sbjct: 76  TPSCCQQSSCQPACCTSSPCQQACCVPVCC 105



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>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CC 91
           +P C  Q   Q AC  S PC++  C   CC
Sbjct: 86  TPSCCQQSSCQLACCASSPCQQACCVPVCC 115



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>DP13A_MOUSE (Q8K3H0) DCC-interacting protein 13 alpha (Dip13 alpha) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 1)
          Length = 707

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 225 KKSNKVQRKLEKRQQGRTLDSHIEEQFSGGRLLACISSRPGQCG 356
           +K  +++R  EK+Q+  +    IE+       L   SSRP Q G
Sbjct: 636 EKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAG 679



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>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated|
           protein 10.1) (High sulfur keratin-associated protein
           10.1) (Keratin-associated protein 18-1)
           (Keratin-associated protein 18.1)
          Length = 282

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CC 91
           +P C  Q   Q AC  S PC++  C   CC
Sbjct: 76  TPSCCQQSSCQPACCTSSPCQQACCMPVCC 105



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>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated|
           protein 10.6) (High sulfur keratin-associated protein
           10.6) (Keratin-associated protein 18-6)
           (Keratin-associated protein 18.6)
          Length = 365

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CC 91
           +P C  Q   Q AC  S PC++  C   CC
Sbjct: 86  TPSCCQQSSCQLACCASSPCQQACCVPVCC 115



 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CCPFQAVVP 112
           +P C  Q   Q  C  S PC++  C   CC     VP
Sbjct: 205 TPSCCQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVP 241



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>CHD3_DROME (O16102) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)|
           (ATP-dependent helicase Chd3)
          Length = 892

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  NLHNGILHKGLSPHKLIV*RIVNHIQE 3
           NLH      G+ P  L+V R++NH +E
Sbjct: 164 NLHERFYRYGIKPEWLLVQRVINHSEE 190



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>KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-associated|
           protein 10.7) (High sulfur keratin-associated protein
           10.7) (Keratin-associated protein 18-7)
           (Keratin-associated protein 18.7)
          Length = 370

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CCPFQAVVP 112
           +P C  Q   + AC  S PC++  C   CC     VP
Sbjct: 205 TPSCCQQSSCKPACCTSSPCQQACCVPVCCKPVCCVP 241



 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   SPGCGLQFVKQ*ACEDSDPCEECHCAS*CC 91
           +P C  Q   Q AC  S PC++  C   CC
Sbjct: 86  TPSCCQQSSCQLACCASSPCQQACCVPVCC 115



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>MT1X_HUMAN (P80297) Metallothionein-1X (MT-1X) (Metallothionein-IX) (MT-IX)|
          Length = 61

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
 Frame = +2

Query: 5   PGCGLQFVKQ*ACEDSDPCEECHCAS------*CCP 94
           P C    V   AC  S  C+EC C S       CCP
Sbjct: 3   PNCSCSPVGSCACAGSCKCKECKCTSCKKSCCSCCP 38



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>NU2M_PICCA (P48906) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 567

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 15  VYNSSNNELVRTQTLVKNAIVQVDAAPFKQWYLTHY 122
           +YN +NN L+    ++   ++++ AAP   W +  Y
Sbjct: 229 IYNINNNILIGWLFIIIGLLIKIGAAPMYNWSILLY 264



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>PBP2_STRR6 (P0A3M6) Penicillin-binding protein 2B|
          Length = 680

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 30  NNELVRTQTLVKNAIVQVDAAPFKQWYLTHYG 125
           N  L   QTL   +IV   +AP   WY   YG
Sbjct: 399 NGVLSGNQTLTDQSIVFQGSAPINSWYTQAYG 430



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>PBP2_STRPN (P0A3M5) Penicillin-binding protein 2B|
          Length = 680

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 30  NNELVRTQTLVKNAIVQVDAAPFKQWYLTHYG 125
           N  L   QTL   +IV   +AP   WY   YG
Sbjct: 399 NGVLSGNQTLTDQSIVFQGSAPINSWYTQAYG 430


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,097,377
Number of Sequences: 219361
Number of extensions: 537162
Number of successful extensions: 1774
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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