ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF263561.1| Secondary endosymbiont of Glycaspis brimblecombei... 50 6e-04
2gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 46 0.010
3ref|XM_466044.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.010
4gb|AY166599.1| Oryza sativa (indica cultivar-group) ATP-dependen... 46 0.010
5gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 46 0.010
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.010
7dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.010
8dbj|AK068727.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.010
9gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome 46 0.010
10dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 46 0.010
11ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucl... 44 0.038
12gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 44 0.038
13dbj|AP002460.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.038
14gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 44 0.038
15emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 44 0.038
16ref|NM_117549.1| Arabidopsis thaliana ATP binding / nucleoside-t... 42 0.15
17emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA ... 42 0.15
18emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome;... 42 0.15
19emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, ... 42 0.15
20gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 42 0.15
21gb|AE006289.1| Lactococcus lactis subsp. lactis IL1403 section 5... 40 0.59
22gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 0.59
23emb|X73140.1|SHTLYBA S.hyodysenteriae gene for tlyB hemolysin 40 0.59
24emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 0.59
25emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chrom... 40 0.59
26gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 0.59
27dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 0.59
28dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 0.59
29gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 0.59
30gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 0.59
31gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 0.59
32emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 40 0.59
33gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 0.59
34gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 0.59
35gb|U20646.1|SSU20646 Synechococcus sp. PCC 7942 heat shock prote... 40 0.59
36gb|DQ163508.1| Candidatus Hamiltonella defensa clone P100095 gen... 40 0.59
37gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 0.59
38gb|AC185993.3| Pan troglodytes BAC clone CH251-302B8 from chromo... 38 2.3
39gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 38 2.3
40ref|XM_653675.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 2.3
41gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 38 2.3
42gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 38 2.3
43ref|XM_736795.1| Plasmodium chabaudi chabaudi heat shock protein... 38 2.3
44ref|XM_671212.1| Plasmodium berghei strain ANKA heat shock prote... 38 2.3
45gb|DQ366720.1| Uncultured Prochlorococcus marinus clone HF10-110... 38 2.3
46emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 38 2.3
47emb|BX538152.1|HSM806354 Homo sapiens genomic DNA; cDNA DKFZp686... 38 2.3
48gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co... 38 2.3
49gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence 38 2.3
50gb|AC123981.18| Pan troglodytes clone rp43-130h22, complete sequ... 38 2.3
51dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 38 2.3
52dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 38 2.3
53gb|AC074026.14| Staphylococcus aureus clone sabac-16, complete s... 38 2.3
54gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 38 2.3
55gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 38 2.3
56gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 38 2.3
57emb|AL512624.5|CNS07EFD Human chromosome 14 DNA sequence BAC C-2... 38 2.3
58emb|AL929601.4|CNS08CCG Human chromosome 14 DNA sequence Partial... 38 2.3
59emb|AL589182.4|CNS07EG2 Human chromosome 14 DNA sequence BAC R-1... 38 2.3
60gb|AY704571.1| Emiliania huxleyi Clp protease ATP binding subuni... 38 2.3
61gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, comple... 38 2.3
62dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 38 2.3
63dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 38 2.3
64gb|L35272.1|SOYSB100HS Glycine max heat shock protein (SB100) mR... 38 2.3
65dbj|AP000529.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca... 38 2.3
66gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 36 9.3
67gb|AE013175.1| Thermoanaerobacter tengcongensis MB4, section 202... 36 9.3
68gb|CP000114.1| Streptococcus agalactiae A909, complete genome 36 9.3
69gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC... 36 9.3
70gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 36 9.3
71gb|AF409138.1| Lumpy skin disease virus isolate Neethling vaccin... 36 9.3
72ref|XM_962727.1| PREDICTED: Tribolium castaneum similar to Activ... 36 9.3
73gb|AE014231.1| Streptococcus agalactiae 2603V/R section 41 of 10... 36 9.3
74emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 36 9.3
75emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chrom... 36 9.3
76emb|AL766847.1|SAG766847 Streptococcus agalactiae NEM316 complet... 36 9.3
77gb|AY077835.1| Goatpox virus Pellor, complete genome 36 9.3
78gb|AY077836.1| Goatpox virus G20-LKV, complete genome 36 9.3
79gb|AF325528.1| Lumpy skin disease virus NI-2490 isolate Neethlin... 36 9.3
80gb|AF409137.1| Lumpy skin disease virus NW-LW isolate Neethling ... 36 9.3
81dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 36 9.3
82dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 36 9.3
83gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 36 9.3
84dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 36 9.3
85dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 36 9.3
86dbj|AB004784.1| Thermotoga neapolitana genes for F-ATPase I, a, ... 36 9.3 
>gb|AF263561.1| Secondary endosymbiont of Glycaspis brimblecombei 23S rRNA
            pseudouridine synthase (rluD) gene, partial cds;
            hypothetical protein YfiH (yfiH) and ClpB protease (clpB)
            genes, complete cds; 16S ribosomal RNA gene, complete
            sequence; intergenic spacer, complete sequence; tRNA-Glu
            gene, complete sequence; and 23S ribosomal RNA gene,
            partial sequence
          Length = 9906

 Score = 50.1 bits (25), Expect = 6e-04
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 33   ggtcctacaggtgttggtaaaaccgagct 61
            |||||||| ||||||||||||||||||||
Sbjct: 3621 ggtcctacgggtgttggtaaaaccgagct 3649
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 33     ggtcctacaggtgttggtaaaac 55
              |||||||||||||||||||||||
Sbjct: 199796 ggtcctacaggtgttggtaaaac 199774
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>ref|XM_466044.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2817

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgacagacctatcgctacgatgctcttttgtggtcctacaggtgttggtaaaaccgagc 60
            ||||||||||||| || ||  | || || |||||||| ||||| ||||||||||| ||||
Sbjct: 1946 ctgacagacctattgccactctacttttctgtggtccgacaggagttggtaaaactgagc 2005

               
Query: 61   tta 63
            |||
Sbjct: 2006 tta 2008
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>gb|AY166599.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
            ATP-binding subunit precursor (CLPD1) mRNA, complete cds;
            nuclear gene for chloroplast product
          Length = 3142

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgacagacctatcgctacgatgctcttttgtggtcctacaggtgttggtaaaaccgagc 60
            ||||||||||||| || ||  | || || |||||||| ||||| ||||||||||| ||||
Sbjct: 2051 ctgacagacctattgccactctacttttctgtggtccgacaggagttggtaaaactgagc 2110

               
Query: 61   tta 63
            |||
Sbjct: 2111 tta 2113
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 33      ggtcctacaggtgttggtaaaac 55
               |||||||||||||||||||||||
Sbjct: 3026681 ggtcctacaggtgttggtaaaac 3026659
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1        ctgacagacctatcgctacgatgctcttttgtggtcctacaggtgttggtaaaaccgagc 60
                ||||||||||||| || ||  | || || |||||||| ||||| ||||||||||| ||||
Sbjct: 19274051 ctgacagacctattgccactctacttttctgtggtccgacaggagttggtaaaactgagc 19274110

                   
Query: 61       tta 63
                |||
Sbjct: 19274111 tta 19274113
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>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1     ctgacagacctatcgctacgatgctcttttgtggtcctacaggtgttggtaaaaccgagc 60
             ||||||||||||| || ||  | || || |||||||| ||||| ||||||||||| ||||
Sbjct: 41849 ctgacagacctattgccactctacttttctgtggtccgacaggagttggtaaaactgagc 41908

                
Query: 61    tta 63
             |||
Sbjct: 41909 tta 41911
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>dbj|AK068727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159L15, full
            insert sequence
          Length = 2619

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgacagacctatcgctacgatgctcttttgtggtcctacaggtgttggtaaaaccgagc 60
            ||||||||||||| || ||  | || || |||||||| ||||| ||||||||||| ||||
Sbjct: 1599 ctgacagacctattgccactctacttttctgtggtccgacaggagttggtaaaactgagc 1658

               
Query: 61   tta 63
            |||
Sbjct: 1659 tta 1661
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>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 39     acaggtgttggtaaaaccgagct 61
              |||||||||||||||||||||||
Sbjct: 122600 acaggtgttggtaaaaccgagct 122622
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 32     tggtcctacaggtgttggtaaaaccgagctt 62
              |||||| || |||||||||||||||||||||
Sbjct: 152813 tggtccaacgggtgttggtaaaaccgagctt 152843
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>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding / protein binding AT2G25140 mRNA,
            complete cds
          Length = 3223

 Score = 44.1 bits (22), Expect = 0.038
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 33   ggtcctacaggtgttggtaaaaccgagctt 62
            ||||| |||||||||||||| |||||||||
Sbjct: 2222 ggtccaacaggtgttggtaagaccgagctt 2251
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>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 3223

 Score = 44.1 bits (22), Expect = 0.038
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 33   ggtcctacaggtgttggtaaaaccgagctt 62
            ||||| |||||||||||||| |||||||||
Sbjct: 2222 ggtccaacaggtgttggtaagaccgagctt 2251
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>dbj|AP002460.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F1D9
          Length = 111554

 Score = 44.1 bits (22), Expect = 0.038
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 33    ggtcctacaggtgttggtaaaaccgagctt 62
             ||||| ||||||||||| ||||||||||||
Sbjct: 30970 ggtccaacaggtgttgggaaaaccgagctt 30999
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>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 2895

 Score = 44.1 bits (22), Expect = 0.038
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 33   ggtcctacaggtgttggtaaaaccgagctt 62
            ||||| |||||||||||||| |||||||||
Sbjct: 2068 ggtccaacaggtgttggtaagaccgagctt 2097
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 44.1 bits (22), Expect = 0.038
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 33      ggtcctacaggtgttggtaaaaccgagctt 62
               |||||||| |||||||||||||| ||||||
Sbjct: 2560012 ggtcctactggtgttggtaaaacagagctt 2560041
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>ref|NM_117549.1| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
            nucleotide binding / protein binding AT4G14670 mRNA,
            complete cds
          Length = 1872

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 33   ggtcctacaggtgttggtaaaaccgagct 61
            ||||| || ||||||||||||||||||||
Sbjct: 1711 ggtccaactggtgttggtaaaaccgagct 1739
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>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1
          Length = 206606

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 33     ggtcctacaggtgttggtaaaaccgagct 61
              ||||| || ||||||||||||||||||||
Sbjct: 170311 ggtccaactggtgttggtaaaaccgagct 170339
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>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7
          Length = 349746

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 32     tggtcctacaggtgttggtaaaacc 56
              ||||||| |||||||||||||||||
Sbjct: 324776 tggtcctccaggtgttggtaaaacc 324800
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>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39
          Length = 197976

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 33     ggtcctacaggtgttggtaaaaccgagct 61
              ||||| || ||||||||||||||||||||
Sbjct: 115807 ggtccaactggtgttggtaaaaccgagct 115835
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>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 32      tggtcctacaggtgttggtaa 52
               |||||||||||||||||||||
Sbjct: 1919917 tggtcctacaggtgttggtaa 1919897
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>gb|AE006289.1| Lactococcus lactis subsp. lactis IL1403 section 51 of 218 of the
             complete genome
          Length = 12342

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    tggtcctacaggtgttggtaaaac 55
             |||||| |||||||||||||||||
Sbjct: 11295 tggtccaacaggtgttggtaaaac 11318
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>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 36     cctacaggtgttggtaaaaccgagctta 63
              |||||||| || ||||||||||||||||
Sbjct: 166041 cctacaggagtaggtaaaaccgagctta 166014
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>emb|X73140.1|SHTLYBA S.hyodysenteriae gene for tlyB hemolysin
          Length = 2911

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   cctacaggtgttggtaaaac 55
            ||||||||||||||||||||
Sbjct: 1758 cctacaggtgttggtaaaac 1777
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>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 25    tcttttgtggtcctacaggtgttggtaa 52
             |||||||||||||| ||||||| |||||
Sbjct: 27627 tcttttgtggtccttcaggtgtgggtaa 27654
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>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5
          Length = 335050

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    cctacaggtgttggtaaaac 55
             ||||||||||||||||||||
Sbjct: 23102 cctacaggtgttggtaaaac 23083
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 36      cctacaggtgttggtaaaaccgag 59
               ||||||||||| ||||||||||||
Sbjct: 3232695 cctacaggtgtaggtaaaaccgag 3232672
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 36     cctacaggtgttggtaaaaccgag 59
              |||||||| |||||||||||||||
Sbjct: 514233 cctacaggggttggtaaaaccgag 514210
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete
               genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      cctacaggtgttggtaaaac 55
               ||||||||||||||||||||
Sbjct: 1875144 cctacaggtgttggtaaaac 1875125
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     tggtcctacaggtgttggtaaaac 55
              ||||||| ||||||||||||||||
Sbjct: 847777 tggtcctccaggtgttggtaaaac 847800
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 39      acaggtgttggtaaaaccgagctt 62
               ||||||||||||||||| ||||||
Sbjct: 1897981 acaggtgttggtaaaacagagctt 1897958



 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 46     ttggtaaaaccgagctta 63
              ||||||||||||||||||
Sbjct: 309697 ttggtaaaaccgagctta 309680
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      cctacaggtgttggtaaaac 55
               ||||||||||||||||||||
Sbjct: 2237932 cctacaggtgttggtaaaac 2237913



 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 33      ggtcctacaggtgttggtaaaac 55
               |||||||| ||||||||||||||
Sbjct: 1975527 ggtcctactggtgttggtaaaac 1975549
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>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00
          Length = 1457619

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     cctacaggtgttggtaaaac 55
              ||||||||||||||||||||
Sbjct: 157367 cctacaggtgttggtaaaac 157386



 Score = 36.2 bits (18), Expect = 9.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 32     tggtcctacaggtgttggtaaa 53
              ||||||||||||||| ||||||
Sbjct: 352233 tggtcctacaggtgtaggtaaa 352212
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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     cctacaggtgttggtaaaac 55
              ||||||||||||||||||||
Sbjct: 219911 cctacaggtgttggtaaaac 219930
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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 42      ggtgttggtaaaaccgagct 61
               ||||||||||||||||||||
Sbjct: 1184574 ggtgttggtaaaaccgagct 1184593
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>gb|U20646.1|SSU20646 Synechococcus sp. PCC 7942 heat shock protein ClpB (clpB) gene,
            complete cds
          Length = 2776

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 36   cctacaggtgttggtaaaaccgag 59
            |||||||| |||||||||||||||
Sbjct: 1946 cctacaggggttggtaaaaccgag 1969
to top
>gb|DQ163508.1| Candidatus Hamiltonella defensa clone P100095 genomic sequence
          Length = 1547

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 32   tggtcctacaggtgttggtaaaac 55
            ||||||||| ||||||||||||||
Sbjct: 1500 tggtcctactggtgttggtaaaac 1477
to top
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 36      cctacaggtgttggtaaaaccgag 59
               |||||||| |||||||||||||||
Sbjct: 1106570 cctacaggggttggtaaaaccgag 1106593
to top
>gb|AC185993.3| Pan troglodytes BAC clone CH251-302B8 from chromosome 22, complete
             sequence
          Length = 156992

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    gctcttttgtggtcctaca 41
             |||||||||||||||||||
Sbjct: 80126 gctcttttgtggtcctaca 80144
to top
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     ggtcctacaggtgttggtaaaac 55
              |||||||||||||| ||||||||
Sbjct: 233963 ggtcctacaggtgtaggtaaaac 233985
to top
>ref|XM_653675.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1163.2), mRNA
          Length = 2403

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 32   tggtcctacaggtgttggtaaaaccgagctt 62
            ||||||||| ||||||||||| || ||||||
Sbjct: 1584 tggtcctaccggtgttggtaagactgagctt 1614
to top
>gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-69B14, complete
            sequence
          Length = 195667

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 26   cttttgtggtcctacaggtgttg 48
            ||||| |||||||||||||||||
Sbjct: 8692 cttttatggtcctacaggtgttg 8670
to top
>gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-86C14, complete
              sequence
          Length = 190251

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 26     cttttgtggtcctacaggtgttg 48
              ||||| |||||||||||||||||
Sbjct: 152171 cttttatggtcctacaggtgttg 152149
to top
>ref|XM_736795.1| Plasmodium chabaudi chabaudi heat shock protein 101 (PC000279.05.0)
            partial mRNA
          Length = 2409

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 33   ggtcctacaggtgttggtaaaac 55
            |||||||| ||||||||||||||
Sbjct: 1600 ggtcctactggtgttggtaaaac 1622
to top
>ref|XM_671212.1| Plasmodium berghei strain ANKA heat shock protein 101 (PB001190.00.0)
            partial mRNA
          Length = 2676

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 33   ggtcctacaggtgttggtaaaac 55
            |||||||| ||||||||||||||
Sbjct: 1912 ggtcctactggtgttggtaaaac 1934
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>gb|DQ366720.1| Uncultured Prochlorococcus marinus clone HF10-110B11 genomic sequence
          Length = 42294

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 25   tcttttgtggtcctacaggtgttggtaaaac 55
            |||||| ||| ||||| ||||||||||||||
Sbjct: 1229 tcttttctggacctaccggtgttggtaaaac 1259
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 36      cctacaggtgttggtaaaaccgagctt 62
               ||||| |||||||||||||| ||||||
Sbjct: 2611287 cctactggtgttggtaaaacagagctt 2611313
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>emb|BX538152.1|HSM806354 Homo sapiens genomic DNA; cDNA DKFZp686C1939 (from clone
            DKFZp686C1939)
          Length = 3649

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 23   gctcttttgtggtcctaca 41
            |||||||||||||||||||
Sbjct: 1808 gctcttttgtggtcctaca 1826
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>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome
          Length = 105309

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 39    acaggtgttggtaaaaccgagct 61
             ||||||||||||||||| |||||
Sbjct: 35107 acaggtgttggtaaaactgagct 35129
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>gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence
          Length = 196097

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    gctcttttgtggtcctaca 41
             |||||||||||||||||||
Sbjct: 61342 gctcttttgtggtcctaca 61360
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>gb|AC123981.18| Pan troglodytes clone rp43-130h22, complete sequence
          Length = 172816

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    gctcttttgtggtcctaca 41
             |||||||||||||||||||
Sbjct: 50188 gctcttttgtggtcctaca 50170
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 36      cctacaggtgttggtaaaaccgagctt 62
               ||||| |||||||||||||| ||||||
Sbjct: 2692812 cctactggtgttggtaaaacagagctt 2692838
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 33      ggtcctacaggtgttggtaaaac 55
               |||||||||||||| ||||||||
Sbjct: 2486045 ggtcctacaggtgtaggtaaaac 2486023
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>gb|AC074026.14| Staphylococcus aureus clone sabac-16, complete sequence
          Length = 52695

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 36   cctacaggtgttggtaaaaccgagctt 62
            ||||| |||||||||||||| ||||||
Sbjct: 3859 cctactggtgttggtaaaacagagctt 3885
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 36      cctacaggtgttggtaaaaccgagctt 62
               ||||| |||||||||||||| ||||||
Sbjct: 2623261 cctactggtgttggtaaaacagagctt 2623287
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 36      cctacaggtgttggtaaaaccgagctt 62
               ||||| |||||||||||||| ||||||
Sbjct: 2635205 cctactggtgttggtaaaacagagctt 2635231
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 36      cctacaggtgttggtaaaaccgagctt 62
               ||||| |||||||||||||| ||||||
Sbjct: 2686566 cctactggtgttggtaaaacagagctt 2686592
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>emb|AL512624.5|CNS07EFD Human chromosome 14 DNA sequence BAC C-2311B13 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 154078

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    gctcttttgtggtcctaca 41
             |||||||||||||||||||
Sbjct: 48531 gctcttttgtggtcctaca 48513
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>emb|AL929601.4|CNS08CCG Human chromosome 14 DNA sequence Partial sequence from BAC R-244H18 of
              library RPCI-11 from chromosome 14 of Homo sapiens (Human),
              complete sequence
          Length = 176156

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     gctcttttgtggtcctaca 41
              |||||||||||||||||||
Sbjct: 132965 gctcttttgtggtcctaca 132983
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>emb|AL589182.4|CNS07EG2 Human chromosome 14 DNA sequence BAC R-146E13 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161840

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 23   gctcttttgtggtcctaca 41
            |||||||||||||||||||
Sbjct: 7996 gctcttttgtggtcctaca 8014
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>gb|AY704571.1| Emiliania huxleyi Clp protease ATP binding subunit (clpC) gene,
            complete cds; chloroplast
          Length = 2454

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 39   acaggtgttggtaaaaccgagct 61
            ||||||||||||||||| |||||
Sbjct: 1642 acaggtgttggtaaaactgagct 1664
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>gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, complete sequence
          Length = 178029

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     gctcttttgtggtcctaca 41
              |||||||||||||||||||
Sbjct: 101545 gctcttttgtggtcctaca 101563
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 36      cctacaggtgttggtaaaaccgagctt 62
               ||||| |||||||||||||| ||||||
Sbjct: 2631929 cctactggtgttggtaaaacagagctt 2631955
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 36      cctacaggtgttggtaaaaccgagctt 62
               ||||| |||||||||||||| ||||||
Sbjct: 2622386 cctactggtgttggtaaaacagagctt 2622412
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>gb|L35272.1|SOYSB100HS Glycine max heat shock protein (SB100) mRNA, complete cds
          Length = 3049

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 32   tggtcctacaggtgttggtaaaaccgagctt 62
            |||||| || |||||||||||||| ||||||
Sbjct: 1950 tggtccaactggtgttggtaaaactgagctt 1980
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>dbj|AP000529.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region,
             clone:c3G11
          Length = 37981

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    gctcttttgtggtcctaca 41
             |||||||||||||||||||
Sbjct: 13489 gctcttttgtggtcctaca 13471
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 45      gttggtaaaaccgagctt 62
               ||||||||||||||||||
Sbjct: 1954526 gttggtaaaaccgagctt 1954509
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>gb|AE013175.1| Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the
           complete genome
          Length = 10177

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 36  cctacaggtgttggtaaaaccgagct 61
           ||||||||||||||||| || |||||
Sbjct: 893 cctacaggtgttggtaagacggagct 868
to top
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 40     caggtgttggtaaaaccg 57
              ||||||||||||||||||
Sbjct: 942547 caggtgttggtaaaaccg 942564
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>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence,
             complete sequence
          Length = 100559

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 21    atgctcttttgtggtcct 38
             ||||||||||||||||||
Sbjct: 33720 atgctcttttgtggtcct 33737
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 40     caggtgttggtaaaaccg 57
              ||||||||||||||||||
Sbjct: 479670 caggtgttggtaaaaccg 479653
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>gb|AF409138.1| Lumpy skin disease virus isolate Neethling vaccine LW 1959, complete
             genome
          Length = 150509

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 39    acaggtgttggtaaaacc 56
             ||||||||||||||||||
Sbjct: 82911 acaggtgttggtaaaacc 82894
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>ref|XM_962727.1| PREDICTED: Tribolium castaneum similar to Activator 1 140 kDa subunit
            (Replication factor C large subunit) (Germline
            transcription factor 1) (LOC656183), mRNA
          Length = 3036

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                      
Query: 31   gtggtcctacaggtgttggtaaaacc 56
            |||||||  |||||||||||||||||
Sbjct: 1484 gtggtccaccaggtgttggtaaaacc 1509
to top
>gb|AE014231.1| Streptococcus agalactiae 2603V/R section 41 of 100 of the complete
            genome
          Length = 24097

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 40   caggtgttggtaaaaccg 57
            ||||||||||||||||||
Sbjct: 5158 caggtgttggtaaaaccg 5175
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 37      ctacaggtgttggtaaaaccga 58
               ||||||| ||||||||||||||
Sbjct: 1428137 ctacaggagttggtaaaaccga 1428116
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>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5
          Length = 254050

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 28     tttgtggtcctacaggtgttggtaaa 53
              ||||||||||| | ||||||||||||
Sbjct: 153891 tttgtggtccttcgggtgttggtaaa 153916
to top
>emb|AL766847.1|SAG766847 Streptococcus agalactiae NEM316 complete genome, segment 5
          Length = 167050

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 40     caggtgttggtaaaaccg 57
              ||||||||||||||||||
Sbjct: 123409 caggtgttggtaaaaccg 123426
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>gb|AY077835.1| Goatpox virus Pellor, complete genome
          Length = 149599

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 39    acaggtgttggtaaaacc 56
             ||||||||||||||||||
Sbjct: 82468 acaggtgttggtaaaacc 82451
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>gb|AY077836.1| Goatpox virus G20-LKV, complete genome
          Length = 149723

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 39    acaggtgttggtaaaacc 56
             ||||||||||||||||||
Sbjct: 82531 acaggtgttggtaaaacc 82514
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>gb|AF325528.1| Lumpy skin disease virus NI-2490 isolate Neethling 2490, complete
             genome
          Length = 150773

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 39    acaggtgttggtaaaacc 56
             ||||||||||||||||||
Sbjct: 83039 acaggtgttggtaaaacc 83022
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>gb|AF409137.1| Lumpy skin disease virus NW-LW isolate Neethling Warmbaths LW, complete
             genome
          Length = 150793

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 39    acaggtgttggtaaaacc 56
             ||||||||||||||||||
Sbjct: 83039 acaggtgttggtaaaacc 83022
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>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 33     ggtcctacaggtgttggtaaaaccga 58
              ||||||||||||||||| || |||||
Sbjct: 758169 ggtcctacaggtgttggaaagaccga 758194
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 40     caggtgttggtaaaaccg 57
              ||||||||||||||||||
Sbjct: 714801 caggtgttggtaaaaccg 714818
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 42     ggtgttggtaaaaccgag 59
              ||||||||||||||||||
Sbjct: 729054 ggtgttggtaaaaccgag 729037
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 42      ggtgttggtaaaaccgag 59
               ||||||||||||||||||
Sbjct: 3644036 ggtgttggtaaaaccgag 3644053
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 37      ctacaggtgttggtaaaaccga 58
               ||||||| ||||||||||||||
Sbjct: 1438301 ctacaggagttggtaaaaccga 1438280
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>dbj|AB004784.1| Thermotoga neapolitana genes for F-ATPase I, a, c, b, delta, alpha,
            gamma, beta, epsilon subunits, complete cds
          Length = 7677

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 40   caggtgttggtaaaaccg 57
            ||||||||||||||||||
Sbjct: 6089 caggtgttggtaaaaccg 6106


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 295,189
Number of Sequences: 3902068
Number of extensions: 295189
Number of successful extensions: 17683
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17283
Number of HSP's gapped (non-prelim): 395
length of query: 63
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 42
effective length of database: 17,151,101,840
effective search space: 720346277280
effective search space used: 720346277280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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