ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506822.1| PREDICTED Oryza sativa (japonica cultivar-group... 272 1e-69
2ref|XM_466189.1| Oryza sativa (japonica cultivar-group), mRNA 272 1e-69
3dbj|AK069920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
4dbj|AK060250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 6e-65
5ref|XM_472578.1| Oryza sativa (japonica cultivar-group), predic... 131 2e-27
6dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
8dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
10emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4,... 88 3e-14
11gb|AY108662.1| Zea mays PCO146921 mRNA sequence 80 7e-12
12ref|NM_125781.2| Arabidopsis thaliana UVR8 (UVB-RESISTANCE 8) AT... 50 0.007
13gb|BT000600.1| Arabidopsis thaliana UVB-resistance protein UVR8 ... 50 0.007
14gb|AF130441.1| Arabidopsis thaliana UVB-resistance protein UVR8 ... 50 0.007
15gb|AY125497.1| Arabidopsis thaliana AT5g63860/MGI19_6 mRNA, comp... 50 0.007
16emb|BX831176.1|CNS0A0PB Arabidopsis thaliana Full-length cDNA Co... 46 0.10
17gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosom... 42 1.6
18gb|AC124355.3| Mus musculus BAC clone RP24-483G17 from chromosom... 42 1.6
19dbj|AK032281.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.6
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, com... 40 6.3
23gb|AC183804.3| Pan troglodytes BAC clone CH251-67P16 from chromo... 40 6.3
24gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome... 40 6.3
25emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in... 40 6.3
26emb|AL365361.12| Human DNA sequence from clone RP11-284N8 on chr... 40 6.3
27emb|AL132655.13|HSJ806M20 Human DNA sequence from clone RP4-806M... 40 6.3
28gb|AC130893.3| Homo sapiens X BAC RP13-926M18 (Roswell Park Canc... 40 6.3
29dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, comp... 40 6.3
30gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswel... 40 6.3
31gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 6.3
32gb|AY028080.1| Mus musculus pericentriolar material gene 1 prote... 40 6.3
33gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, comple... 40 6.3
34gb|AY096105.1|AY096105S1 Vibrio vulnificus super-integron, parti... 40 6.3
35gb|AC008268.3|AC008268 Homo sapiens BAC clone RP11-34G16 from 2,... 40 6.3
36emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 i... 40 6.3
37gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 40 6.3
38gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, co... 40 6.3 
>ref|XM_506822.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470G10.15 mRNA
          Length = 1691

 Score =  272 bits (137), Expect = 1e-69
 Identities = 290/341 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagttggtgttgaagataa 74
            |||||||||||||||||||||||| |||||||||||||| ||||| |||||||  |||||
Sbjct: 955  agatgggaaactctatggatggggatggaacaagtttggacaagtcggtgttggcgataa 1014

                                                                        
Query: 75   cgtagatcactgttcccccgtagaggtgaattttcctgacgaacagaaaattgtacaggt 134
             | ||||||||| ||||| ||  |||| ||||||||  ||||||||||| |||| || ||
Sbjct: 1015 tgaagatcactgctccccggtgcaggtcaattttccaaacgaacagaaagttgttcaagt 1074

                                                                        
Query: 135  tgcctgtggatggaggcatactcttgccctgacagaaaacaagaatattttctcatgggg 194
            ||| |||||||||||||| ||||||||||||||||||  ||| ||| |||||||||||||
Sbjct: 1075 tgcttgtggatggaggcacactcttgccctgacagaagccaaaaatgttttctcatgggg 1134

                                                                        
Query: 195  caggggtgccagtggacagcttggtcatggtgaaataatcgacaggaacacgcccaagat 254
             |||||  |||||||||||||||| |||||||||||| | || |||||||  ||||||||
Sbjct: 1135 aaggggcaccagtggacagcttggccatggtgaaatagttgataggaacatacccaagat 1194

                                                                        
Query: 255  gatcgatgccctaagcctggacgggtctgcttgcaagcagttggagtcatcaaacgttgt 314
            |||||||||| | |||  ||| || || |||||||||||| |||| |||||||| |  ||
Sbjct: 1195 gatcgatgccttgagctcggatggatcagcttgcaagcagctggaatcatcaaaagccgt 1254

                                                     
Query: 315  tccaatgacagttaaagtctgggtctcaccttcggagcgat 355
             |||||| ||| |||||| |||||||| || || |||||||
Sbjct: 1255 cccaatgtcagctaaagtttgggtctcgccatcagagcgat 1295
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>ref|XM_466189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1675

 Score =  272 bits (137), Expect = 1e-69
 Identities = 290/341 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagttggtgttgaagataa 74
            |||||||||||||||||||||||| |||||||||||||| ||||| |||||||  |||||
Sbjct: 956  agatgggaaactctatggatggggatggaacaagtttggacaagtcggtgttggcgataa 1015

                                                                        
Query: 75   cgtagatcactgttcccccgtagaggtgaattttcctgacgaacagaaaattgtacaggt 134
             | ||||||||| ||||| ||  |||| ||||||||  ||||||||||| |||| || ||
Sbjct: 1016 tgaagatcactgctccccggtgcaggtcaattttccaaacgaacagaaagttgttcaagt 1075

                                                                        
Query: 135  tgcctgtggatggaggcatactcttgccctgacagaaaacaagaatattttctcatgggg 194
            ||| |||||||||||||| ||||||||||||||||||  ||| ||| |||||||||||||
Sbjct: 1076 tgcttgtggatggaggcacactcttgccctgacagaagccaaaaatgttttctcatgggg 1135

                                                                        
Query: 195  caggggtgccagtggacagcttggtcatggtgaaataatcgacaggaacacgcccaagat 254
             |||||  |||||||||||||||| |||||||||||| | || |||||||  ||||||||
Sbjct: 1136 aaggggcaccagtggacagcttggccatggtgaaatagttgataggaacatacccaagat 1195

                                                                        
Query: 255  gatcgatgccctaagcctggacgggtctgcttgcaagcagttggagtcatcaaacgttgt 314
            |||||||||| | |||  ||| || || |||||||||||| |||| |||||||| |  ||
Sbjct: 1196 gatcgatgccttgagctcggatggatcagcttgcaagcagctggaatcatcaaaagccgt 1255

                                                     
Query: 315  tccaatgacagttaaagtctgggtctcaccttcggagcgat 355
             |||||| ||| |||||| |||||||| || || |||||||
Sbjct: 1256 cccaatgtcagctaaagtttgggtctcgccatcagagcgat 1296
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>dbj|AK069920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G23, full
            insert sequence
          Length = 1675

 Score =  272 bits (137), Expect = 1e-69
 Identities = 290/341 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagttggtgttgaagataa 74
            |||||||||||||||||||||||| |||||||||||||| ||||| |||||||  |||||
Sbjct: 956  agatgggaaactctatggatggggatggaacaagtttggacaagtcggtgttggcgataa 1015

                                                                        
Query: 75   cgtagatcactgttcccccgtagaggtgaattttcctgacgaacagaaaattgtacaggt 134
             | ||||||||| ||||| ||  |||| ||||||||  ||||||||||| |||| || ||
Sbjct: 1016 tgaagatcactgctccccggtgcaggtcaattttccaaacgaacagaaagttgttcaagt 1075

                                                                        
Query: 135  tgcctgtggatggaggcatactcttgccctgacagaaaacaagaatattttctcatgggg 194
            ||| |||||||||||||| ||||||||||||||||||  ||| ||| |||||||||||||
Sbjct: 1076 tgcttgtggatggaggcacactcttgccctgacagaagccaaaaatgttttctcatgggg 1135

                                                                        
Query: 195  caggggtgccagtggacagcttggtcatggtgaaataatcgacaggaacacgcccaagat 254
             |||||  |||||||||||||||| |||||||||||| | || |||||||  ||||||||
Sbjct: 1136 aaggggcaccagtggacagcttggccatggtgaaatagttgataggaacatacccaagat 1195

                                                                        
Query: 255  gatcgatgccctaagcctggacgggtctgcttgcaagcagttggagtcatcaaacgttgt 314
            |||||||||| | |||  ||| || || |||||||||||| |||| |||||||| |  ||
Sbjct: 1196 gatcgatgccttgagctcggatggatcagcttgcaagcagctggaatcatcaaaagccgt 1255

                                                     
Query: 315  tccaatgacagttaaagtctgggtctcaccttcggagcgat 355
             |||||| ||| |||||| |||||||| || || |||||||
Sbjct: 1256 cccaatgtcagctaaagtttgggtctcgccatcagagcgat 1296
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>dbj|AK060250.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-B02, full
            insert sequence
          Length = 1691

 Score =  256 bits (129), Expect = 6e-65
 Identities = 288/341 (84%)
 Strand = Plus / Plus

                                                                        
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagttggtgttgaagataa 74
            |||||||||||||||||||||||| |||||||||||||| ||||| |||||||  |||||
Sbjct: 955  agatgggaaactctatggatggggatggaacaagtttggacaagtcggtgttggcgataa 1014

                                                                        
Query: 75   cgtagatcactgttcccccgtagaggtgaattttcctgacgaacagaaaattgtacaggt 134
             | ||||| ||| ||||| ||  |||| ||||||||  ||||||||||| |||| || ||
Sbjct: 1015 tgaagatcgctgctccccggtgcaggtcaattttccaaacgaacagaaagttgttcaagt 1074

                                                                        
Query: 135  tgcctgtggatggaggcatactcttgccctgacagaaaacaagaatattttctcatgggg 194
            ||| |||||||||||||| ||||||||||||||||||  ||| ||| |||||||||||||
Sbjct: 1075 tgcttgtggatggaggcacactcttgccctgacagaagccaaaaatgttttctcatgggg 1134

                                                                        
Query: 195  caggggtgccagtggacagcttggtcatggtgaaataatcgacaggaacacgcccaagat 254
             |||||  |||||||||||||||| |||||||||||| | || |||||||  ||||||||
Sbjct: 1135 aaggggcaccagtggacagcttggccatggtgaaatagttgataggaacatacccaagat 1194

                                                                        
Query: 255  gatcgatgccctaagcctggacgggtctgcttgcaagcagttggagtcatcaaacgttgt 314
            ||| |||||| | |||  ||| || || |||||||||||| |||| |||||||| |  ||
Sbjct: 1195 gatagatgccttgagctcggatggatcagcttgcaagcagctggaatcatcaaaagccgt 1254

                                                     
Query: 315  tccaatgacagttaaagtctgggtctcaccttcggagcgat 355
             |||||| ||| |||||| |||||||| || || |||||||
Sbjct: 1255 cccaatgtcagctaaagtttgggtctcgccatcagagcgat 1295
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>ref|XM_472578.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1362

 Score =  131 bits (66), Expect = 2e-27
 Identities = 189/230 (82%)
 Strand = Plus / Plus

                                                                        
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagttggtgttgaagataa 74
            |||||| || || ||||| |||||||||||||||||||| ||||| || ||||  |||| 
Sbjct: 906  agatggaaagctttatggttgggggtggaacaagtttgggcaagtcggagttggtgatac 965

                                                                        
Query: 75   cgtagatcactgttcccccgtagaggtgaattttcctgacgaacagaaaattgtacaggt 134
             |  |||||||||| ||| ||| |||| || ||||| || || |||||| |||  || ||
Sbjct: 966  tgatgatcactgtttcccagtacaggtcaagtttccagaggatcagaaagttgcccaagt 1025

                                                                        
Query: 135  tgcctgtggatggaggcatactcttgccctgacagaaaacaagaatattttctcatgggg 194
            ||| || || |||||||||||||||||  | |||||||| || ||| |||||||||||||
Sbjct: 1026 tgcttgcgggtggaggcatactcttgcatttacagaaaagaaaaatgttttctcatgggg 1085

                                                              
Query: 195  caggggtgccagtggacagcttggtcatggtgaaataatcgacaggaaca 244
             |||||| | || ||||| |||||||||||||||||| | ||||||||||
Sbjct: 1086 gaggggtactagcggacaacttggtcatggtgaaatagttgacaggaaca 1135
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>dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123M01, full
            insert sequence
          Length = 2021

 Score =  131 bits (66), Expect = 2e-27
 Identities = 189/230 (82%)
 Strand = Plus / Plus

                                                                        
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagttggtgttgaagataa 74
            |||||| || || ||||| |||||||||||||||||||| ||||| || ||||  |||| 
Sbjct: 1249 agatggaaagctttatggttgggggtggaacaagtttgggcaagtcggagttggtgatac 1308

                                                                        
Query: 75   cgtagatcactgttcccccgtagaggtgaattttcctgacgaacagaaaattgtacaggt 134
             |  |||||||||| ||| ||| |||| || ||||| || || |||||| |||  || ||
Sbjct: 1309 tgatgatcactgtttcccagtacaggtcaagtttccagaggatcagaaagttgcccaagt 1368

                                                                        
Query: 135  tgcctgtggatggaggcatactcttgccctgacagaaaacaagaatattttctcatgggg 194
            ||| || || |||||||||||||||||  | |||||||| || ||| |||||||||||||
Sbjct: 1369 tgcttgcgggtggaggcatactcttgcatttacagaaaagaaaaatgttttctcatgggg 1428

                                                              
Query: 195  caggggtgccagtggacagcttggtcatggtgaaataatcgacaggaaca 244
             |||||| | || ||||| |||||||||||||||||| | ||||||||||
Sbjct: 1429 gaggggtactagcggacaacttggtcatggtgaaatagttgacaggaaca 1478
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 5e-25
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                            
Query: 118      cagaaaattgtacaggttgcctgtggatggaggcatactcttgccctgacagaaaacaag 177
                |||||| |||| || ||||| |||||||||||||| ||||||||||||||||||  ||| 
Sbjct: 20937319 cagaaagttgttcaagttgcttgtggatggaggcacactcttgccctgacagaagccaaa 20937378

                                                                      
Query: 178      aatattttctcatggggcaggggtgccagtggacagcttggtcatggtgaaata 231
                ||| ||||||||||||| |||||  |||||||||||||||| ||||||||||||
Sbjct: 20937379 aatgttttctcatggggaaggggcaccagtggacagcttggccatggtgaaata 20937432



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 15       agatgggaaactctatggatgggggtggaacaag 48
                |||||||||||||||||||||||| |||||||||
Sbjct: 20936316 agatgggaaactctatggatggggatggaacaag 20936349



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                            
Query: 238      aggaacacgcccaagatgatcgatgccctaagcctggacgggtctgcttgcaagcagttg 297
                |||||||  |||||||||||||||||| | |||  ||| || || |||||||||||| ||
Sbjct: 20937538 aggaacatacccaagatgatcgatgccttgagctcggatggatcagcttgcaagcagctg 20937597

                           
Query: 298      gagtcatcaaa 308
                || ||||||||
Sbjct: 20937598 gaatcatcaaa 20937608
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score =  123 bits (62), Expect = 5e-25
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                         
Query: 118   cagaaaattgtacaggttgcctgtggatggaggcatactcttgccctgacagaaaacaag 177
             |||||| |||| || ||||| |||||||||||||| ||||||||||||||||||  ||| 
Sbjct: 60791 cagaaagttgttcaagttgcttgtggatggaggcacactcttgccctgacagaagccaaa 60850

                                                                   
Query: 178   aatattttctcatggggcaggggtgccagtggacagcttggtcatggtgaaata 231
             ||| ||||||||||||| |||||  |||||||||||||||| ||||||||||||
Sbjct: 60851 aatgttttctcatggggaaggggcaccagtggacagcttggccatggtgaaata 60904



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 15    agatgggaaactctatggatgggggtggaacaag 48
             |||||||||||||||||||||||| |||||||||
Sbjct: 59788 agatgggaaactctatggatggggatggaacaag 59821



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 238   aggaacacgcccaagatgatcgatgccctaagcctggacgggtctgcttgcaagcagttg 297
             |||||||  |||||||||||||||||| | |||  ||| || || |||||||||||| ||
Sbjct: 61010 aggaacatacccaagatgatcgatgccttgagctcggatggatcagcttgcaagcagctg 61069

                        
Query: 298   gagtcatcaaa 308
             || ||||||||
Sbjct: 61070 gaatcatcaaa 61080
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                            
Query: 145      tggaggcatactcttgccctgacagaaaacaagaatattttctcatggggcaggggtgcc 204
                |||||||||||||||||  | |||||||| || ||| ||||||||||||| |||||| | 
Sbjct: 21695497 tggaggcatactcttgcatttacagaaaagaaaaatgttttctcatgggggaggggtact 21695556

                                                    
Query: 205      agtggacagcttggtcatggtgaaataatcgacagg 240
                || ||||| |||||||||||||||||| | ||||||
Sbjct: 21695557 agcggacaacttggtcatggtgaaatagttgacagg 21695592
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>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20,
            complete sequence
          Length = 141915

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                        
Query: 145  tggaggcatactcttgccctgacagaaaacaagaatattttctcatggggcaggggtgcc 204
            |||||||||||||||||  | |||||||| || ||| ||||||||||||| |||||| | 
Sbjct: 7114 tggaggcatactcttgcatttacagaaaagaaaaatgttttctcatgggggaggggtact 7173

                                                
Query: 205  agtggacagcttggtcatggtgaaataatcgacagg 240
            || ||||| |||||||||||||||||| | ||||||
Sbjct: 7174 agcggacaacttggtcatggtgaaatagttgacagg 7209
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>gb|AY108662.1| Zea mays PCO146921 mRNA sequence
          Length = 2037

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 142/176 (80%)
 Strand = Plus / Plus

                                                                        
Query: 130  caggttgcctgtggatggaggcatactcttgccctgacagaaaacaagaatattttctca 189
            |||||||| || ||||||||||||||||| |||||  | || || || ||| | ||||| 
Sbjct: 1333 caggttgcatgcggatggaggcatactctggccctctccgagaagaaaaatgtcttctcc 1392

                                                                        
Query: 190  tggggcaggggtgccagtggacagcttggtcatggtgaaataatcgacaggaacacgccc 249
            ||||| |||||  | || |||||||| ||  | ||||||||| |||||||||||||||| 
Sbjct: 1393 tgggggaggggcactagcggacagctcggcaacggtgaaatagtcgacaggaacacgcct 1452

                                                                    
Query: 250  aagatgatcgatgccctaagcctggacgggtctgcttgcaagcagttggagtcatc 305
              | ||||||||||||| |||   ||||| ||||| |||||| || ||||||||||
Sbjct: 1453 gtgctgatcgatgccctgagctcagacggttctgcctgcaagaagctggagtcatc 1508
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>ref|NM_125781.2| Arabidopsis thaliana UVR8 (UVB-RESISTANCE 8) AT5G63860 (UVR8) mRNA,
            complete cds
          Length = 1801

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagt 59
            |||||| ||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 1044 agatggaaaactatatggatggggttggaataagtttggacaagt 1088
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>gb|BT000600.1| Arabidopsis thaliana UVB-resistance protein UVR8
           (At5g63860/MGI19_6) mRNA, complete cds
          Length = 1323

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 15  agatgggaaactctatggatgggggtggaacaagtttggccaagt 59
           |||||| ||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 879 agatggaaaactatatggatggggttggaataagtttggacaagt 923
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>gb|AF130441.1| Arabidopsis thaliana UVB-resistance protein UVR8 (UVR8) mRNA,
            complete cds
          Length = 1818

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagt 59
            |||||| ||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 1044 agatggaaaactatatggatggggttggaataagtttggacaagt 1088
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>gb|AY125497.1| Arabidopsis thaliana AT5g63860/MGI19_6 mRNA, complete cds
          Length = 3155

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 15   agatgggaaactctatggatgggggtggaacaagtttggccaagt 59
            |||||| ||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 962  agatggaaaactatatggatggggttggaataagtttggacaagt 1006
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>emb|BX831176.1|CNS0A0PB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS65ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1581

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 15  agatgggaaactctatggatgggggtggaacaagtttgg 53
           |||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 893 agatggaaaactatatggatggggttggaataagtttgg 931
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>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete
             sequence
          Length = 190119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 26    tctatggatgggggtggaacaagtt 50
             |||||| ||||||||||||||||||
Sbjct: 20741 tctatgaatgggggtggaacaagtt 20765
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>gb|AC124355.3| Mus musculus BAC clone RP24-483G17 from chromosome 18, complete
            sequence
          Length = 161461

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 26   tctatggatgggggtggaacaagtt 50
            |||||| ||||||||||||||||||
Sbjct: 7083 tctatgaatgggggtggaacaagtt 7059
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>dbj|AK032281.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430515E23
            product:unclassifiable, full insert sequence
          Length = 1560

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 26   tctatggatgggggtggaacaagtt 50
            |||||| ||||||||||||||||||
Sbjct: 1375 tctatgaatgggggtggaacaagtt 1351
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 15       agatgggaaactctatggatgggggtggaacaa 47
                ||||||||||||  ||||||||||||| |||||
Sbjct: 20801460 agatgggaaacttcatggatgggggtgcaacaa 20801428
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>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1124_B05
          Length = 109917

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 15    agatgggaaactctatggatgggggtggaacaa 47
             ||||||||||||  ||||||||||||| |||||
Sbjct: 32593 agatgggaaacttcatggatgggggtgcaacaa 32561
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>gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, complete sequence
          Length = 169209

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aacaagaatattttctcatg 191
             ||||||||||||||||||||
Sbjct: 14119 aacaagaatattttctcatg 14138
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>gb|AC183804.3| Pan troglodytes BAC clone CH251-67P16 from chromosome 2, complete
             sequence
          Length = 169437

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ccaagttggtgttgaagata 73
             ||||||||||||||||||||
Sbjct: 47144 ccaagttggtgttgaagata 47125
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>gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome 3, complete sequence
          Length = 138128

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    aacaagaatattttctcatg 191
              ||||||||||||||||||||
Sbjct: 106733 aacaagaatattttctcatg 106752
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>emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in linkage group 15,
              complete sequence
          Length = 166308

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    gtctgcttgcaagcagttgg 298
              ||||||||||||||||||||
Sbjct: 121313 gtctgcttgcaagcagttgg 121332
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>emb|AL365361.12| Human DNA sequence from clone RP11-284N8 on chromosome 1 Contains the
             KCNA2 gene for a potassium voltage-gated channel from the
             shaker-related subfamily member 2, the KCNA3 gene for a
             potassium voltage-gated channel from the shaker-related
             subfamily member 3 and two CpG islands, complete sequence
          Length = 193182

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   cagcttggtcatggtgaaat 230
             ||||||||||||||||||||
Sbjct: 89336 cagcttggtcatggtgaaat 89317
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>emb|AL132655.13|HSJ806M20 Human DNA sequence from clone RP4-806M20 on chromosome 20 Contains a
             novel pseudogene, the 5' end of the GNAS complex locus and
             a CpG island, complete sequence
          Length = 126586

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   gcaggggtgccagtggacag 213
             ||||||||||||||||||||
Sbjct: 19015 gcaggggtgccagtggacag 19034
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>gb|AC130893.3| Homo sapiens X BAC RP13-926M18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110999

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   agaaaacaagaatattttct 187
             ||||||||||||||||||||
Sbjct: 27494 agaaaacaagaatattttct 27513
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>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence
          Length = 271577

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   attcgccctcgtccccgacg 373
             ||||||||||||||||||||
Sbjct: 95971 attcgccctcgtccccgacg 95952
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>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167344

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      cggcacgaggtgaagatggg 21
              ||||||||||||||||||||
Sbjct: 111819 cggcacgaggtgaagatggg 111838
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    cggcacgaggtgaagatggg 21
            ||||||||||||||||||||
Sbjct: 2705 cggcacgaggtgaagatggg 2724
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>gb|AY028080.1| Mus musculus pericentriolar material gene 1 protein (Pcm1) gene,
             partial cds; and acid ceramidase (Asah1) and FSHD Region
             Gene 1 protein (Frg1) genes, complete cds
          Length = 183135

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   gacagaaaacaagaatattt 184
             ||||||||||||||||||||
Sbjct: 89309 gacagaaaacaagaatattt 89290
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>gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, complete sequence
          Length = 172705

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ccaagttggtgttgaagata 73
             ||||||||||||||||||||
Sbjct: 64659 ccaagttggtgttgaagata 64678
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>gb|AY096105.1|AY096105S1 Vibrio vulnificus super-integron, partial sequence
          Length = 1866

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 taaagtctgggtctcacctt 346
           ||||||||||||||||||||
Sbjct: 468 taaagtctgggtctcacctt 487
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>gb|AC008268.3|AC008268 Homo sapiens BAC clone RP11-34G16 from 2, complete sequence
          Length = 187883

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ccaagttggtgttgaagata 73
              ||||||||||||||||||||
Sbjct: 140160 ccaagttggtgttgaagata 140179
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>emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 in linkage group 20,
              complete sequence
          Length = 158302

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    gaaaacaagaatattttctc 188
              ||||||||||||||||||||
Sbjct: 136410 gaaaacaagaatattttctc 136391
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>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      cggcacgaggtgaagatggg 21
              ||||||||||||||||||||
Sbjct: 122857 cggcacgaggtgaagatggg 122876
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>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence
          Length = 231792

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    gaaactctatggatgggggt 40
             ||||||||||||||||||||
Sbjct: 52391 gaaactctatggatgggggt 52372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,861,668
Number of Sequences: 3902068
Number of extensions: 3861668
Number of successful extensions: 69029
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68880
Number of HSP's gapped (non-prelim): 146
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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