| Clone Name | bags8a04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108472.1| Zea mays PCO119082 mRNA sequence Length = 2122 Score = 149 bits (75), Expect = 1e-32 Identities = 153/179 (85%) Strand = Plus / Plus Query: 428 tcttccttcacagccacagggcttccaacctgctgttcctactccgtcgcaaccaattga 487 ||||||||||||| |||||||||| |||| || | ||||| |||| || ||||||||||| Sbjct: 1166 tcttccttcacaggcacagggctttcaacttggtattcctgctccatcacaaccaattga 1225 Query: 488 tctcagtgctctcgagggtccaggagcagcaaagcaagttgctcagcccccagcgcctaa 547 |||||| |||||||||||||| ||||| || ||||||| ||||| || ||||| |||| Sbjct: 1226 tctcagcgctctcgagggtcctggagcggcgaagcaagctgctcgccctccagcacctac 1285 Query: 548 agccgtgcgtcctggccaggtaccccgtggcgctcctgctgcagaatgctacaggatgg 606 || ||||| |||||||||||||| || || || ||||||||||||||||||| ||||| Sbjct: 1286 tgctgtgcggcctggccaggtaccacgcggggcccctgctgcagaatgctacaagatgg 1344 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||| || || || ||||||||||||||| Sbjct: 810 ggtcctgttattgcaggcatgggagtgacggctgggccgatccctgaggacttcttccag 869 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| ||||||| || ||||||||| || ||| |||||||| Sbjct: 870 aacactattccatcgcatcaacttgcggctcaactacctcctcc 913 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| | | |||||||| ||||| |||||||| ||||||| Sbjct: 1075 ctcagcaaccaggcattcctatggattctattggcctgcctgatggtggtgtccccccac 1134 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 1135 agagtcagccacttccttcaca 1156 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 ||||||||||||||||||||||||||||| ||||| Sbjct: 993 aatgttggtcttccagatggtggggtgccaccaca 1027
>dbj|AK059658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-D06, full insert sequence Length = 1686 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 422 ccaggctcttccttcacagccacagggcttccaacctgctgttcctactccgtcgcaacc 481 ||||||||||||| |||||||||| ||||| ||||||||| ||||| | ||||||||| Sbjct: 653 ccaggctcttcctccacagccacatggctttcaacctgctattcctgccatgtcgcaacc 712 Query: 482 aattgatctcagtgctctcgagggtccaggagcagcaaagcaagttgctcagcccccagc 541 ||||||||| |||||||| || ||||||||| | |||||| | | ||| ||||| || Sbjct: 713 aattgatcttagtgctcttgaaggtccaggacagggaaagcaggctcctcgcccccctgc 772 Query: 542 gcctaaagccgtgcgtcctggccaggtaccccgtggcgctcctgctgcagaatgctacag 601 |||| || ||||| ||||| ||||| || ||||| |||||||| ||||| ||||||| Sbjct: 773 acctactgctgtgcggcctggacaggttccacgtggtgctcctgcagcagagtgctacaa 832 Query: 602 gatggg 607 |||||| Sbjct: 833 gatggg 838 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 ||||||||||| || ||| |||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 321 ggtcctgtaattggtggcatgggagtgacggctggacctattcctgaggatttcttccag 380 Query: 153 aacaccgttccatcacagcaacttgc 178 || || ||||||| ||||| ||||| Sbjct: 381 aatactattccatcgcagcagcttgc 406 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | |||||| |||||| |||| ||| | |||||||| |||||||| ||||||| Sbjct: 568 ctcagcaaccaggcatgcctatggaccctattagtctacctgatggtggtgttcccccac 627 Query: 418 agagccaggctcttcc 433 ||||||| ||||||| Sbjct: 628 agagccaacctcttcc 643 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 264 caaaacatgacgggcaatgttggtcttccagatggtggggtgccgccacagg 315 |||||||||| || |||||||||||||||||||||||||| || ||||||| Sbjct: 492 caaaacatgatggctaatgttggtcttccagatggtggggtcccaccacagg 543
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 422 ccaggctcttccttcacagccacagggcttccaacctgctgttcctactccgtcgcaacc 481 ||||||||||||| |||||||||| ||||| ||||||||| ||||| | ||||||||| Sbjct: 14360436 ccaggctcttcctccacagccacatggctttcaacctgctattcctgccatgtcgcaacc 14360495 Query: 482 aattgatctcagtgctctcgagggtccagga 512 ||||||||| |||||||| || ||||||||| Sbjct: 14360496 aattgatcttagtgctcttgaaggtccagga 14360526 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 ||||||||||| || ||| |||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 14360104 ggtcctgtaattggtggcatgggagtgacggctggacctattcctgaggatttcttccag 14360163 Query: 153 aacaccgttccatcacagcaacttgc 178 || || ||||||| ||||| ||||| Sbjct: 14360164 aatactattccatcgcagcagcttgc 14360189 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | |||||| |||||| |||| ||| | |||||||| |||||||| ||||||| Sbjct: 14360351 ctcagcaaccaggcatgcctatggaccctattagtctacctgatggtggtgttcccccac 14360410 Query: 418 agagccaggctcttcc 433 ||||||| ||||||| Sbjct: 14360411 agagccaacctcttcc 14360426 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 264 caaaacatgacgggcaatgttggtcttccagatggtggggtgccgccacagg 315 |||||||||| || |||||||||||||||||||||||||| || ||||||| Sbjct: 14360275 caaaacatgatggctaatgttggtcttccagatggtggggtcccaccacagg 14360326
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 422 ccaggctcttccttcacagccacagggcttccaacctgctgttcctactccgtcgcaacc 481 ||||||||||||| |||||||||| ||||| ||||||||| ||||| | ||||||||| Sbjct: 52239 ccaggctcttcctccacagccacatggctttcaacctgctattcctgccatgtcgcaacc 52298 Query: 482 aattgatctcagtgctctcgagggtccagga 512 ||||||||| |||||||| || ||||||||| Sbjct: 52299 aattgatcttagtgctcttgaaggtccagga 52329 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 ||||||||||| || ||| |||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 51907 ggtcctgtaattggtggcatgggagtgacggctggacctattcctgaggatttcttccag 51966 Query: 153 aacaccgttccatcacagcaacttgc 178 || || ||||||| ||||| ||||| Sbjct: 51967 aatactattccatcgcagcagcttgc 51992 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | |||||| |||||| |||| ||| | |||||||| |||||||| ||||||| Sbjct: 52154 ctcagcaaccaggcatgcctatggaccctattagtctacctgatggtggtgttcccccac 52213 Query: 418 agagccaggctcttcc 433 ||||||| ||||||| Sbjct: 52214 agagccaacctcttcc 52229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 264 caaaacatgacgggcaatgttggtcttccagatggtggggtgccgccacagg 315 |||||||||| || |||||||||||||||||||||||||| || ||||||| Sbjct: 52078 caaaacatgatggctaatgttggtcttccagatggtggggtcccaccacagg 52129
>gb|DQ430048.1| Sorghum propinquum locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430047.1| Sorghum bicolor voucher PI585454 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430046.1| Sorghum bicolor voucher PI267539 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430045.1| Sorghum bicolor voucher PI267408 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430044.1| Sorghum bicolor voucher PI152702 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430043.1| Sorghum bicolor voucher NSL92371 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430042.1| Sorghum bicolor voucher NSL87902 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430041.1| Sorghum bicolor voucher NSL87666 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430040.1| Sorghum bicolor voucher NSL77217 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430039.1| Sorghum bicolor voucher NSL77034 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430038.1| Sorghum bicolor voucher NSL56174 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430037.1| Sorghum bicolor voucher NSL56003 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430036.1| Sorghum bicolor voucher NSL55243 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430035.1| Sorghum bicolor voucher NSL51365 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430034.1| Sorghum bicolor voucher NSL51030 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430033.1| Sorghum bicolor voucher NSL50875 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|DQ430032.1| Sorghum bicolor voucher BTx623 locus pSB1729 genomic sequence Length = 795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 93 ggtcctgtaatcggaggcctgggagtgacagctggacctattcccgaggacttcttccag 152 |||||||| || | |||| |||||||||| ||||||||||| || ||||||||||||||| Sbjct: 386 ggtcctgttattgcaggcatgggagtgaccgctggacctatccctgaggacttcttccag 445 Query: 153 aacaccgttccatcacagcaacttgcgaatcgactgcctcctcc 196 ||||| |||||||||| || |||||| || ||| |||||||| Sbjct: 446 aacactattccatcacatcagcttgcggctcaactacctcctcc 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 358 ctcagcagcaaggcattcctatgaacccaattggcctacctgacggtggtgtacccccac 417 ||||||| | ||||||||||||| || | |||||||| || ||||| ||||| ||||||| Sbjct: 672 ctcagcaaccaggcattcctatggactctattggcctgccagacggcggtgttcccccac 731 Query: 418 agagccaggctcttccttcaca 439 |||| ||| | ||||||||||| Sbjct: 732 agagtcagccacttccttcaca 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 421 gccaggctcttccttcacagccacagggcttccaacctg 459 |||||||||||||||||||| |||||||||| ||||||| Sbjct: 756 gccaggctcttccttcacaggcacagggctttcaacctg 794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 279 aatgttggtcttccagatggtggggtgccgccaca 313 |||||||| ||||||||||||||||| || ||||| Sbjct: 569 aatgttggccttccagatggtggggtcccaccaca 603
>gb|AC164574.15| Mus musculus 6 BAC RP23-446I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188358 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 233 tgggatgaacgttggcagaccgg 255 ||||||||||||||||||||||| Sbjct: 127044 tgggatgaacgttggcagaccgg 127022
>gb|AC164628.8| Mus musculus 6 BAC RP23-82H18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205032 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 233 tgggatgaacgttggcagaccgg 255 ||||||||||||||||||||||| Sbjct: 902 tgggatgaacgttggcagaccgg 924
>gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome 6, complete sequence Length = 194338 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 233 tgggatgaacgttggcagaccgg 255 ||||||||||||||||||||||| Sbjct: 116987 tgggatgaacgttggcagaccgg 116965
>gb|AC159338.10| Mus musculus 6 BAC RP24-540A24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173081 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 233 tgggatgaacgttggcagaccgg 255 ||||||||||||||||||||||| Sbjct: 161869 tgggatgaacgttggcagaccgg 161847
>ref|XM_791405.1| PREDICTED: Strongylocentrotus purpuratus 34/67 kD laminin binding protein (LOC373183), mRNA Length = 895 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 425 ggctcttccttcacagccacag 446 |||||||||||||||||||||| Sbjct: 200 ggctcttccttcacagccacag 179
>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence Length = 189288 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 ccacagagccaggctcttccttcaca 439 ||||||| |||||||||||||||||| Sbjct: 81931 ccacagacccaggctcttccttcaca 81956
>gb|U02369.1|SPU02369 Strongylocentrotus purpuratus 34/67 kDa laminin-binding protein mRNA, partial cds Length = 1157 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 425 ggctcttccttcacagccacag 446 |||||||||||||||||||||| Sbjct: 452 ggctcttccttcacagccacag 431
>ref|XM_977775.1| PREDICTED: Mus musculus RIKEN cDNA 1700034K16 gene (1700034K16Rik), mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ctccaggagcaattctgcaaa 213 ||||||||||||||||||||| Sbjct: 325 ctccaggagcaattctgcaaa 305
>ref|XM_920040.2| PREDICTED: Mus musculus RIKEN cDNA 1700034K16 gene, transcript variant 4 (1700034K16Rik), mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ctccaggagcaattctgcaaa 213 ||||||||||||||||||||| Sbjct: 325 ctccaggagcaattctgcaaa 305
>ref|XM_897771.2| PREDICTED: Mus musculus RIKEN cDNA 1700034K16 gene, transcript variant 2 (1700034K16Rik), mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ctccaggagcaattctgcaaa 213 ||||||||||||||||||||| Sbjct: 325 ctccaggagcaattctgcaaa 305
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 ggcttccaacctgctgttcct 467 ||||||||||||||||||||| Sbjct: 3532083 ggcttccaacctgctgttcct 3532103
>dbj|AK161371.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930509D03 product:hypothetical Leucine-rich repeat/Leucine-rich repeat, typical subtype containing protein, full insert sequence Length = 1214 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ctccaggagcaattctgcaaa 213 ||||||||||||||||||||| Sbjct: 314 ctccaggagcaattctgcaaa 294
>dbj|AK006601.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700034K16 product:hypothetical Leucine-rich repeat/Leucine-rich repeat, typical subtype containing protein, full insert sequence Length = 1245 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ctccaggagcaattctgcaaa 213 ||||||||||||||||||||| Sbjct: 322 ctccaggagcaattctgcaaa 302
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 acaagcgccggcaggcggcac 91 ||||||||||||||||||||| Sbjct: 648743 acaagcgccggcaggcggcac 648723
>gb|U75349.3|SHU75349 Serpulina hyodysenteriae bit operon, complete sequence Length = 6200 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 acagggcttccaacctgctgt 463 ||||||||||||||||||||| Sbjct: 4033 acagggcttccaacctgctgt 4013
>emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chromosome 4, complete sequence Length = 207430 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 ctccaggagcaattctgcaaa 213 ||||||||||||||||||||| Sbjct: 178794 ctccaggagcaattctgcaaa 178814
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 cctactccgtcgcaaccaat 484 |||||||||||||||||||| Sbjct: 24136 cctactccgtcgcaaccaat 24155
>gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosome 18, complete sequence Length = 184588 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gatgaacgttggcagaccgg 255 |||||||||||||||||||| Sbjct: 103619 gatgaacgttggcagaccgg 103638
>gb|AC146296.3| Mus musculus BAC clone RP23-277D1 from chromosome 9, complete sequence Length = 177641 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tctttggaaatactttggtg 62 |||||||||||||||||||| Sbjct: 125088 tctttggaaatactttggtg 125107
>ref|XM_389952.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09776.1) partial mRNA Length = 963 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cagcaaagcaagttgctcag 533 |||||||||||||||||||| Sbjct: 935 cagcaaagcaagttgctcag 954
>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete sequence Length = 165103 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aggacttcttccagaacacc 158 |||||||||||||||||||| Sbjct: 126027 aggacttcttccagaacacc 126008
>emb|CR956377.9| Pig DNA sequence from clone PigE-220E19 on chromosome 7, complete sequence Length = 222390 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ctgcctcctccaggagcaat 205 |||||||||||||||||||| Sbjct: 186673 ctgcctcctccaggagcaat 186654
>gb|AY198410.1| Leishmania mexicana putative small GTP-binding protein and paraflagellar rod protein 4 (PFR4) genes, complete cds Length = 6245 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 gcgctcctgctgcagaatgc 596 |||||||||||||||||||| Sbjct: 2202 gcgctcctgctgcagaatgc 2183
>emb|AL359199.34| Human DNA sequence from clone RP11-296A20 on chromosome 1 Contains the 5' end of the CAPZB gene for capping protein (actin filament) muscle Z-line, beta, complete sequence Length = 148290 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 ccacagagccaggctcttccttca 437 |||||||||||| ||||||||||| Sbjct: 2727 ccacagagccagcctcttccttca 2704
>emb|AL732293.14| Mouse DNA sequence from clone RP23-360J13 on chromosome 11, complete sequence Length = 117779 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gccacaggggccacagcaag 327 |||||||||||||||||||| Sbjct: 6131 gccacaggggccacagcaag 6112
>emb|AL591410.8| Mouse DNA sequence from clone RP23-96I2 on chromosome 11 Contains part of the Myo1d gene for myosin ID, complete sequence Length = 231675 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 agagccaggctcttccttcacagc 441 ||||||||||||||||||| |||| Sbjct: 201753 agagccaggctcttccttctcagc 201730
>dbj|AK015427.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930449A18 product:hypothetical alpha/beta-Hydrolases structure containing protein, full insert sequence Length = 2072 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tgggatgaacgttggcagac 252 |||||||||||||||||||| Sbjct: 378 tgggatgaacgttggcagac 359
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 cctactccgtcgcaaccaat 484 |||||||||||||||||||| Sbjct: 7746550 cctactccgtcgcaaccaat 7746569
>dbj|BS000178.1| Pan troglodytes chromosome 22 clone:RP43-042C06, map 22, complete sequences Length = 176580 Score = 40.1 bits (20), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 agttgntttctttggaaatactt 57 ||||| ||||||||||||||||| Sbjct: 151929 agttgttttctttggaaatactt 151907
>dbj|BS000179.1| Pan troglodytes chromosome 22 clone:RP43-082J09, map 22, complete sequences Length = 184352 Score = 40.1 bits (20), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 agttgntttctttggaaatactt 57 ||||| ||||||||||||||||| Sbjct: 31262 agttgttttctttggaaatactt 31240
>dbj|AB113354.2| Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC 499E6 Length = 154749 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ccccacagagccaggctctt 431 |||||||||||||||||||| Sbjct: 6166 ccccacagagccaggctctt 6147
>emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chromosome 7, complete sequence Length = 177899 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cacagagccaggctcttcct 434 |||||||||||||||||||| Sbjct: 98899 cacagagccaggctcttcct 98880
>dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, section 51/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 agttgntttctttggaaatactt 57 ||||| ||||||||||||||||| Sbjct: 335757 agttgttttctttggaaatactt 335735
>gb|AC138585.14| Mus musculus chromosome 3, clone RP23-174P13, complete sequence Length = 209896 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tgggatgaacgttggcagac 252 |||||||||||||||||||| Sbjct: 121435 tgggatgaacgttggcagac 121416
>dbj|AP000744.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-691P24, complete sequence Length = 126000 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tccttcacagccacagggct 450 |||||||||||||||||||| Sbjct: 64527 tccttcacagccacagggct 64508
>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence Length = 231142 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 tgcctcctccaggagcaattctgc 210 |||||||||||| ||||||||||| Sbjct: 78017 tgcctcctccagcagcaattctgc 77994
>gb|AC165412.3| Mus musculus chromosome 3, clone RP24-161M18, complete sequence Length = 176496 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tgggatgaacgttggcagac 252 |||||||||||||||||||| Sbjct: 5527 tgggatgaacgttggcagac 5508
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 318 ccacagcaaggccagttcgctcag 341 ||||||||||||||||| |||||| Sbjct: 1006895 ccacagcaaggccagttagctcag 1006918
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 cctactccgtcgcaaccaat 484 |||||||||||||||||||| Sbjct: 57058 cctactccgtcgcaaccaat 57077
>dbj|AP000885.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B680H4, SOD-AML region, complete sequence Length = 86719 Score = 40.1 bits (20), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 agttgntttctttggaaatactt 57 ||||| ||||||||||||||||| Sbjct: 43224 agttgttttctttggaaatactt 43202 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,929,461 Number of Sequences: 3902068 Number of extensions: 4929461 Number of successful extensions: 93819 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93531 Number of HSP's gapped (non-prelim): 288 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)