>VE2_HPV36 (P50809) Regulatory protein E2|
          Length = 509

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
 Frame = -1

Query: 373 DPASKHAAATRKVSHEKRKSMRAQAREPPGLSPRPQQKHRLASMTTTCAAVRRRS-APTP 197
           D  +K    + +    + K  R   R P   + RPQ K R +      +  R RS + + 
Sbjct: 227 DSTTKQLTTSEQPQQTETKG-RKYGRRPSSRTRRPQAKQRRSRSRHRSSRSRSRSQSRSH 285

Query: 196 *PVATSES*TQ*SYSLARSGVTVALLRRCSAATARPKAMRLRSRA 62
            P   S +    S SLA++GV     R  S +T+R    R RSR+
Sbjct: 286 TPTTRSATTRSRSPSLAKTGVQRVSTRSRSRSTSRRGGRRRRSRS 330

>PI2R_BOVIN (P79393) Prostacyclin receptor (Prostanoid IP receptor) (PGI|
           receptor) (Prostaglandin I2 receptor)
          Length = 385

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 21/51 (41%), Positives = 25/51 (49%)
 Frame = +3

Query: 252 SRCFCCGRGLKPGGSRACALMLFLFSWLTFLVAAACLLAGSVRNAYHTRYR 404
           S CF   R  +PGG   CA +L   S +  LVAA  L  GSV  +    YR
Sbjct: 168 SWCFIRMRSAEPGG---CAFLLAYASLVALLVAAIVLCNGSVTLSLCRMYR 215

>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)|
          Length = 1513

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 21/96 (21%), Positives = 38/96 (39%)
 Frame = -1

Query: 454  TPLRSVSQESGSPLKIPLYRVWYALRTDPASKHAAATRKVSHEKRKSMRAQAREPPGLSP 275
            TP+ S  Q + SP  +P      +  T P + H  +T   +     S  +    P   + 
Sbjct: 1397 TPISSTPQPTSSPTTLPTTSPLTSSATSPTTSHITSTVSPTTSPTTSTTSPTTSPTTSTT 1456

Query: 274  RPQQKHRLASMTTTCAAVRRRSAPTP*PVATSES*T 167
             P      ++ + T +     ++PTP P  ++ S T
Sbjct: 1457 SP----TTSTTSPTPSPTTSTTSPTPSPTTSTTSPT 1488


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,913,658
Number of Sequences: 219361
Number of extensions: 1190421
Number of successful extensions: 4819
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4813
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)