| Clone Name | bags7j24 |
|---|---|
| Clone Library Name | barley_pub |
>YIL0_YEAST (P40481) Hypothetical 42.5 kDa protein in COX5B-PFK26 intergenic| region Length = 377 Score = 57.8 bits (138), Expect = 2e-08 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 9/96 (9%) Frame = +3 Query: 234 VFGVKNSDLVPGKYEGGLKLWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIY 413 + G + DL YEGGLK WE S DLV L+ ++ DR+ + ++E+GCG LP + Sbjct: 115 LLGDTSEDLRKNIYEGGLKSWECSYDLVDLLSENV--DRISNDIDAVVEIGCGTALPSEF 172 Query: 414 ---AAL------KGAGLVHFQDFNAEVLRCLTIPNV 494 +AL KG V D+NA VLR +TIPN+ Sbjct: 173 LFRSALLRNDRSKGLKFV-LTDYNASVLRLVTIPNL 207
>NNT1_CRYNE (Q5KDV2) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 299 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +3 Query: 279 GGLKLWEGSL-DLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDF 455 G LW L + +TL++ + + + + +H+LELG G GLP I L G+ V D+ Sbjct: 64 GSHPLWGHHLWNTARTLSTYLLETPQITQSRHVLELGAGAGLPSIVCVLAGSSKVIVTDY 123 Query: 456 NAEVLRCLTIPNVKANLFKESSQ 524 + E L NV NL E + Sbjct: 124 SDEGLLDNLRFNVDVNLEGEEKE 146
>NNT1_GIBZE (Q4I2X5) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 594 Score = 37.4 bits (85), Expect = 0.029 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +3 Query: 291 LWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDF-NAEV 467 LW G+ K + ++D ++GK +LELG GLP + AA+ GA V D+ + ++ Sbjct: 54 LWNGA----KMIADFFEEDLSRVKGKTVLELGAAAGLPSLVAAILGAHKVVVTDYPDPDI 109 Query: 468 LRCL 479 +R + Sbjct: 110 IRIM 113
>NNT1_ASPFU (Q4WYS7) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 259 Score = 36.6 bits (83), Expect = 0.050 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = +3 Query: 354 LIEGKHILELGCGHGLPGIYAALKGAGLVHFQDF 455 L+EGK +LE+G G+P I +A+KGA V D+ Sbjct: 73 LVEGKDVLEVGAAAGVPSIVSAVKGARTVVMTDY 106
>NNT1_YEAST (Q05874) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 261 Score = 36.6 bits (83), Expect = 0.050 Identities = 25/75 (33%), Positives = 36/75 (48%) Frame = +3 Query: 282 GLKLWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNA 461 G LW + L+S + LI+GK +LELG LP + AL GA +V D+ Sbjct: 60 GHLLWNAGIYTANHLDSHPE----LIKGKTVLELGAAAALPSVICALNGAQMVVSTDYPD 115 Query: 462 EVLRCLTIPNVKANL 506 L N+K+N+ Sbjct: 116 PDLMQNIDYNIKSNV 130
>YLW9_CAEEL (P34412) Hypothetical protein F22B7.9| Length = 243 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = +3 Query: 294 WEGSLDLVKTLNS--DIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEV 467 WEG + T+++ +++ + +GK +LE+G GLP +YA GA + + Sbjct: 59 WEGVNTICHTIDNIVNVEMETDFFDGKSVLEIGFVTGLPSVYAFENGAEEIAMHTMDKTS 118 Query: 468 LRCLTIPNVKAN 503 L P +K N Sbjct: 119 LELYCRPTLKRN 130
>NNT1_SCHPO (Q9UT28) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 255 Score = 35.0 bits (79), Expect = 0.15 Identities = 26/91 (28%), Positives = 43/91 (47%) Frame = +3 Query: 291 LWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVL 470 LW ++L ++ + + K +LELG G GLP I +A GA V D+ L Sbjct: 57 LWNSGIELANYIDKNPDT----VRAKKVLELGAGAGLPSIVSAFDGAKFVVSTDYPDPAL 112 Query: 471 RCLTIPNVKANLFKESSQGTFTSRSVGFYAG 563 I N++ N+ K+ ++ +VG+ G Sbjct: 113 ----IDNLEHNV-KQYAEIASKISAVGYLWG 138
>NNT1_YARLI (Q6CHE9) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 273 Score = 33.5 bits (75), Expect = 0.43 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +3 Query: 291 LWEGSLDLVKTLNSDIKDD--RLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDF 455 LW L + SD D+ + L+EGK ++E G G GLP + GA V D+ Sbjct: 59 LWGHLLWNAGKVTSDYLDEHSKELVEGKKVIEFGAGAGLPSLLCHAVGAKQVVITDY 115
>PRMA_WOLSU (P60095) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 275 Score = 33.1 bits (74), Expect = 0.56 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +3 Query: 351 LLIEGKHILELGCGHGLPGIYAALKGA 431 L +EGK +L++GCG G+ I +A KGA Sbjct: 140 LELEGKRVLDVGCGSGILAIASAKKGA 166
>UBIG_PSEPK (Q88M10) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)| (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) Length = 232 Score = 32.0 bits (71), Expect = 1.2 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +3 Query: 342 DDRLLIEGKHILELGCGHGLPGIYAALKGA 431 D+R+ + GK +L++GCG G+ AL+GA Sbjct: 41 DERVSLAGKKVLDVGCGGGILSEAMALRGA 70
>UBIG_COXBU (Q820B5) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)| (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) Length = 234 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 306 LDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGA 431 L L+ + + ++ ++GKH+L++GCG GL A GA Sbjct: 33 LHLINPVRLKYIEQQITLKGKHVLDVGCGGGLLSEALAKHGA 74
>NNT1_EMENI (Q5BAD0) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 262 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 354 LIEGKHILELGCGHGLPGIYAALKGAGLVHFQDF 455 LI GK +LE+G G+P I +A+ GA D+ Sbjct: 73 LIAGKDVLEIGAAAGVPSIVSAIMGARTTVMTDY 106
>TEHB_HAEIN (P45134) Tellurite resistance protein tehB homolog| Length = 286 Score = 31.2 bits (69), Expect = 2.1 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 324 LNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLTIPNVKAN 503 ++ D+ D +I +L+LGCG G +Y +L G + + D N + L K N Sbjct: 108 IHGDVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSW-DHNENSIAFLNETKEKEN 166 Query: 504 L 506 L Sbjct: 167 L 167
>Y1172_PYRFU (Q8U1N4) Hypothetical RNA methyltransferase PF1172 (EC 2.1.1.-)| Length = 411 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +3 Query: 303 SLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLT 482 +++LVKT+ +EG+ ++++ G G G+Y A KG +V F D NA + Sbjct: 260 AVNLVKTVEK-------FVEGEKVVDMYSGVGTFGVYLAKKGMKVVGF-DSNAFAIEMAN 311 Query: 483 ----IPNVKANLFKESSQ 524 I NV+A F S + Sbjct: 312 KNAEINNVEAEFFVASDR 329
>UBIG_CHRVO (Q7NZ91) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)| (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) Length = 232 Score = 31.2 bits (69), Expect = 2.1 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +3 Query: 315 VKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGA 431 + L D D I GK +L++GCG G+ AL+GA Sbjct: 32 INPLRLDFIDRHASIAGKKVLDVGCGGGILAESMALRGA 70
>UBIG_PSESM (Q885T9) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)| (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) Length = 232 Score = 30.8 bits (68), Expect = 2.8 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +3 Query: 342 DDRLLIEGKHILELGCGHGLPGIYAALKGA 431 D+R + GK +L++GCG G+ AL+GA Sbjct: 41 DERANLAGKKVLDVGCGGGILSEAMALRGA 70
>GIDB_LEGPL (Q5WSS3) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 208 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 8/55 (14%) Frame = +3 Query: 357 IEGKHILELGCGHGLPGIYAALKGAGLVHFQ--------DFNAEVLRCLTIPNVK 497 I+G HI+++G G GLPGI A+ L F EV R L I N++ Sbjct: 67 IKGNHIIDVGTGPGLPGIPLAIAKPDLQFVLLDSNGKKISFLNEVKRQLNIKNIE 121
>GIDB_LEGPA (Q5X0Z7) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 208 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 8/55 (14%) Frame = +3 Query: 357 IEGKHILELGCGHGLPGIYAALKGAGLVHFQ--------DFNAEVLRCLTIPNVK 497 I+G HI+++G G GLPGI A+ L F EV R L I N++ Sbjct: 67 IKGNHIIDVGTGPGLPGIPLAIAKPDLQFVLLDSNGKKISFLNEVKRQLNIKNIE 121
>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1088 Score = 30.4 bits (67), Expect = 3.6 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +3 Query: 354 LIEGKHILELGCGHGLPGIYAALKGAGL-VHFQDFNAEVLRCLTIPNVKANLFKESSQGT 530 + + K + ELGCG+G I A K L V+ D N ++ I N+ N F E Q Sbjct: 121 IFKDKTVAELGCGNGWISIAIAEKWLPLKVYGLDINPRAVKISWI-NLYLNAFDEDGQPV 179 Query: 531 FTSRS 545 + S S Sbjct: 180 YDSES 184
>FLGH_HELPJ (Q9ZMB3) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 237 Score = 30.4 bits (67), Expect = 3.6 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 6/46 (13%) Frame = -2 Query: 310 SNDPSHSFNPPSYFPGTKSEFFTPKTSEVLTL------PL*IDRES 191 +N+P+ FNPP+Y T S+ F P+ +++ +L PL DR + Sbjct: 21 ANEPNIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRA 66
>NNT1_NEUCR (Q7S634) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 282 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/55 (29%), Positives = 29/55 (52%) Frame = +3 Query: 291 LWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDF 455 LW G++ + + ++ ++ + +LE+G GLP + AA+ GA V DF Sbjct: 66 LWNGAVIISQYFEEHPEE----VKDRTVLEIGAAAGLPSLVAAVLGAKKVVVTDF 116
>GIDB_LEGPH (Q5ZRJ1) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 208 Score = 30.0 bits (66), Expect = 4.7 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +3 Query: 357 IEGKHILELGCGHGLPGIYAAL 422 I+G HI+++G G GLPGI A+ Sbjct: 67 IKGNHIIDVGTGPGLPGIPLAI 88
>COQ3_SCHPO (O74421) Hexaprenyldihydroxybenzoate methyltransferase,| mitochondrial precursor (EC 2.1.1.114) (Dihydroxyhexaprenylbenzoate methyltransferase) (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) (DHHB-MT) (DHHB-MTas Length = 271 Score = 30.0 bits (66), Expect = 4.7 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Frame = +3 Query: 294 WEGSLDLVKTLNSDIKD-------DRLLIEGKHILELGCGHGLPGIYAALKGAGL 437 W+G L+ +NS D +R GK IL++GCG G+ A GA + Sbjct: 48 WDGGSRLLHLMNSTRLDFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASV 102
>NNT1_CANAL (Q5A013) Putative nicotinamide N-methyltransferase (EC 2.1.1.1)| Length = 262 Score = 30.0 bits (66), Expect = 4.7 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +3 Query: 282 GLKLWEGSLDLVKTLNSDIKDDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDF 455 G LW + L+ K L++GK ILELG LP + +L A V D+ Sbjct: 55 GHLLWNAGIYTADYLD---KHSDTLVQGKKILELGAASALPSLVCSLNHAKEVIVTDY 109
>FLGH_HELPY (O25092) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 237 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Frame = -2 Query: 310 SNDPSHSFNPPSYFPGTKSEFFTPKTSEVLTL------PL*IDRES 191 +N+P FNPP+Y T S+ F P+ +++ +L PL DR + Sbjct: 21 ANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRA 66
>PRMA_PHOLL (P60092) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 296 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 345 DRLLIEGKHILELGCGHGLPGIYAALKGA 431 D L +EGK +++ GCG G+ I A GA Sbjct: 153 DSLNLEGKTVIDFGCGSGILAIAALKLGA 181
>Y928_METJA (Q58338) Hypothetical protein MJ0928 (M.MjaHemkP)| Length = 197 Score = 29.3 bits (64), Expect = 8.0 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +3 Query: 357 IEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLRCLTIPNVKAN 503 ++ K +LE+G G GL I A KGA + D N ++ L N K N Sbjct: 33 VKNKDVLEIGVGTGLISIACAKKGAKKIVGVDINPYAVK-LAKENAKLN 80
>GIDB_PASMU (P57946) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 210 Score = 29.3 bits (64), Expect = 8.0 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +3 Query: 357 IEGKHILELGCGHGLPGIYAAL 422 ++GKH +++G G GLPG+ A+ Sbjct: 71 LQGKHFIDVGTGPGLPGLPLAI 92
>PRMA_SYNY3 (P73820) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 300 Score = 29.3 bits (64), Expect = 8.0 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%) Frame = +3 Query: 174 EPVVVDDSLSIYKGRVNTSDVFGVKNSDLVPGKYEGGLKLWEGSLDL----VKTLNSDIK 341 +P V D IY ++ + NSD + + + G+ G+ +++L ++ Sbjct: 99 QPTPVGDRFIIYPAWIDPPE-----NSDRLILRLDPGVAFGTGTHATTQLCLESLEMRVE 153 Query: 342 DDRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQD 452 D+ + + +LGCG G+ GI A L GA V+ D Sbjct: 154 PDKHQV----LADLGCGSGILGIGAVLLGAAKVYGVD 186
>PRMA_NEIMB (Q9JXW2) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 295 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 345 DRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLR 473 D L G+ +L+ GCG G+ I A GAG D + + +R Sbjct: 158 DTQLKNGESVLDYGCGSGILTIAALKLGAGFAVGVDIDEQAVR 200
>PRMA_NEIMA (Q9JW08) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 295 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 345 DRLLIEGKHILELGCGHGLPGIYAALKGAGLVHFQDFNAEVLR 473 D L G+ +L+ GCG G+ I A GAG D + + +R Sbjct: 158 DTQLKNGESVLDYGCGSGILTIAALKLGAGFAVGVDIDEQAVR 200
>PRMA_ERWCT (Q6DAJ5) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 295 Score = 29.3 bits (64), Expect = 8.0 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 345 DRLLIEGKHILELGCGHGLPGIYAALKGA 431 D L +EGK I++ GCG G+ I A GA Sbjct: 153 DGLDLEGKTIIDFGCGSGILAIAALKLGA 181
>CUBN_MOUSE (Q9JLB4) Cubilin precursor (Intrinsic factor-cobalamin receptor)| Length = 3623 Score = 29.3 bits (64), Expect = 8.0 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%) Frame = +3 Query: 222 NTSDVFGVKNSDLVPGKYEGGLKLWEGSLDLVKTLNSDIKDDRLLIEGK---HILELGCG 392 NT V+ + +S PG + L+L S L +LN + KD + EG H++ CG Sbjct: 1761 NTECVWNIASS---PGNH---LQLSFLSFQLENSLNCN-KDFVEIREGNATGHLMGRYCG 1813 Query: 393 HGLPGIYAALKGAGL 437 + LPG Y++++G L Sbjct: 1814 NSLPGNYSSIEGHNL 1828 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,636,713 Number of Sequences: 219361 Number of extensions: 1399084 Number of successful extensions: 3653 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3649 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)