ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7j24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450590.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 416 bits (210), Expect = e-113 Identities = 405/470 (86%) Strand = Plus / Plus Query: 94 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgaggaatcgc 153 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 324 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgaggaatcgc 383 Query: 154 ccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcgatttacaagg 213 || ||||||||||| | ||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 384 ccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcgatttacaagg 443 Query: 214 gaagagttaacacctctgatgttttcggggtaaaaaactctgatttggttccaggaaaat 273 | |||| | || ||||||||||| || || |||||||||||||| || ||||| |||| Sbjct: 444 ggagagcaagtacttctgatgtttttggagtcaaaaactctgatttagtcccagggaaat 503 Query: 274 atgaaggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcag 333 ||||||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||| Sbjct: 504 atgaaggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcag 563 Query: 334 acatcaaagatgatcgactgcttatagaaggcaaacacatactagagttaggatgtggac 393 |||||||||| || ||| ||||| |||||||||||| || | ||| |||||||||||| Sbjct: 564 acatcaaagaagaccgattgcttttagaaggcaaacgtgtattggagctaggatgtggac 623 Query: 394 atggcctccctggtatctatgccgctctgaagggtgctggtctagttcactttcaggatt 453 |||||||||||||||||||||| ||| |||||||||| |||||| ||||| || |||| Sbjct: 624 atggcctccctggtatctatgctattcttaagggtgctgttctagtccacttccaagatt 683 Query: 454 tcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaagctaatctgttcaagg 513 ||||||||||||| ||||| ||||||||||| ||||||||||| |||||||| || |||| Sbjct: 684 tcaatgctgaggtccttagatgccttaccataccaaatgtaaaggctaatctattgaagg 743 Query: 514 aatcatctcaaggaacattcacatctaggagtgttggtttttatgctggt 563 |||||||| ||| || || |||||| | ||||||||||| | ||||||| Sbjct: 744 aatcatctgaagaaaagtttacatctggtagtgttggtttctttgctggt 793 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 40 tcttctccttctccaaccccagcggctccttcgggttcgg 79 ||||||||||||||||| ||| || |||||||| ||||| Sbjct: 264 tcttctccttctccaactccaacgcttccttcggcttcgg 303
>dbj|AK105521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F10, full insert sequence Length = 1368 Score = 416 bits (210), Expect = e-113 Identities = 405/470 (86%) Strand = Plus / Plus Query: 94 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgaggaatcgc 153 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 323 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgaggaatcgc 382 Query: 154 ccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcgatttacaagg 213 || ||||||||||| | ||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 383 ccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcgatttacaagg 442 Query: 214 gaagagttaacacctctgatgttttcggggtaaaaaactctgatttggttccaggaaaat 273 | |||| | || ||||||||||| || || |||||||||||||| || ||||| |||| Sbjct: 443 ggagagcaagtacttctgatgtttttggagtcaaaaactctgatttagtcccagggaaat 502 Query: 274 atgaaggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcag 333 ||||||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||| Sbjct: 503 atgaaggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcag 562 Query: 334 acatcaaagatgatcgactgcttatagaaggcaaacacatactagagttaggatgtggac 393 |||||||||| || ||| ||||| |||||||||||| || | ||| |||||||||||| Sbjct: 563 acatcaaagaagaccgattgcttttagaaggcaaacgtgtattggagctaggatgtggac 622 Query: 394 atggcctccctggtatctatgccgctctgaagggtgctggtctagttcactttcaggatt 453 |||||||||||||||||||||| ||| |||||||||| |||||| ||||| || |||| Sbjct: 623 atggcctccctggtatctatgctattcttaagggtgctgttctagtccacttccaagatt 682 Query: 454 tcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaagctaatctgttcaagg 513 ||||||||||||| ||||| ||||||||||| ||||||||||| |||||||| || |||| Sbjct: 683 tcaatgctgaggtccttagatgccttaccataccaaatgtaaaggctaatctattgaagg 742 Query: 514 aatcatctcaaggaacattcacatctaggagtgttggtttttatgctggt 563 |||||||| ||| || || |||||| | ||||||||||| | ||||||| Sbjct: 743 aatcatctgaagaaaagtttacatctggtagtgttggtttctttgctggt 792 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 40 tcttctccttctccaaccccagcggctccttcgggttcgg 79 ||||||||||||||||| ||| || |||||||| ||||| Sbjct: 263 tcttctccttctccaactccaacgcttccttcggcttcgg 302
>gb|AY108781.1| Zea mays PCO122043 mRNA sequence Length = 880 Score = 184 bits (93), Expect = 2e-43 Identities = 294/361 (81%) Strand = Plus / Plus Query: 171 ttggagcctgtggtggttgacgactccctatcgatttacaagggaagagttaacacctct 230 |||||||| || ||||| || |||||| | |||| |||||||| ||||| | || ||| Sbjct: 289 ttggagccagtcgtggtcgatgactccttgacgatctacaagggcagagtgagtacatct 348 Query: 231 gatgttttcggggtaaaaaactctgatttggttccaggaaaatatgaaggtgggttgaag 290 || || || || || ||| ||||||||||||| || |||||||||||||||||||||||| Sbjct: 349 gacgtgtttggtgtcaaagactctgatttggtccctggaaaatatgaaggtgggttgaag 408 Query: 291 ctgtgggaaggatcattggacttggtgaaaaccctaaattcagacatcaaagatgatcga 350 ||||||||||| ||||| |||||||||||| |||| ||||| || |||||||| ||| | Sbjct: 409 ctgtgggaaggttcattagacttggtgaaagccctgaattctgatatcaaagaagataaa 468 Query: 351 ctgcttatagaaggcaaacacatactagagttaggatgtggacatggcctccctggtatc 410 | | | | |||||||||| | || | ||| | ||||||||||||||||||||||| || Sbjct: 469 tttcatctggaaggcaaacgcgtattggagcttggatgtggacatggcctccctggcatt 528 Query: 411 tatgccgctctgaagggtgctggtctagttcactttcaggatttcaatgctgaggttctt 470 | ||| | ||| |||||||||| || |||| || || ||||||||||| ||||| ||| Sbjct: 529 tttgcgggtctcaagggtgctgacctgattcatttccaagatttcaatgccgaggtgctt 588 Query: 471 aggtgccttaccatcccaaatgtaaaagctaatctgttcaaggaatcatctcaaggaaca 530 |||||| | || || ||||||||||||| ||||| |||||||| ||| | |||||||| Sbjct: 589 aggtgcttgactataccaaatgtaaaagtcaatcttttcaaggattcaccagaaggaaca 648 Query: 531 t 531 | Sbjct: 649 t 649
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 424 agggtgctggtctagttcactttcaggatttcaatgctgaggttcttaggtgccttacca 483 ||||||||| |||||| ||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 11655443 agggtgctgttctagtccacttccaagatttcaatgctgaggtccttagatgccttacca 11655502 Query: 484 tcccaaatgtaaaagctaatctgttcaaggaatcatctcaaggaacattcacatctagga 543 | ||||||||||| |||||||| || |||||||||||| ||| || || |||||| | | Sbjct: 11655503 taccaaatgtaaaggctaatctattgaaggaatcatctgaagaaaagtttacatctggta 11655562 Query: 544 gtgttggtttttatgctggt 563 |||||||||| | ||||||| Sbjct: 11655563 gtgttggtttctttgctggt 11655582 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 145 aggaatcgcccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcga 204 ||||||||||| ||||||||||| | ||||||||||||||| |||| |||||||| |||| Sbjct: 11653983 aggaatcgcccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcga 11654042 Query: 205 tttacaagg 213 ||||||||| Sbjct: 11654043 tttacaagg 11654051 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 278 aggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcagacat 337 ||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||||||| Sbjct: 11654822 aggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcagacat 11654881 Query: 338 caaagatgatcgactgcttatagaaggcaaac 369 |||||| || ||| ||||| |||||||||||| Sbjct: 11654882 caaagaagaccgattgcttttagaaggcaaac 11654913 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 382 taggatgtggacatggcctccctggtatctatgc 415 |||||||||||||||||||||||||||||||||| Sbjct: 11655322 taggatgtggacatggcctccctggtatctatgc 11655355 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 228 tctgatgttttcggggtaaaaaactctgatttggttccaggaaaatatgaaggt 281 ||||||||||| || || |||||||||||||| || ||||| |||||||||||| Sbjct: 11654689 tctgatgtttttggagtcaaaaactctgatttagtcccagggaaatatgaaggt 11654742 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 94 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgagg 147 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 11653807 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgagg 11653860 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 40 tcttctccttctccaaccccagcggctccttcgggttcgg 79 ||||||||||||||||| ||| || |||||||| ||||| Sbjct: 11653747 tcttctccttctccaactccaacgcttccttcggcttcgg 11653786 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||| |||||||||||||| Sbjct: 5994845 ccctcccccgccgcctccgccgcc 5994868
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 424 agggtgctggtctagttcactttcaggatttcaatgctgaggttcttaggtgccttacca 483 ||||||||| |||||| ||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 90077 agggtgctgttctagtccacttccaagatttcaatgctgaggtccttagatgccttacca 90136 Query: 484 tcccaaatgtaaaagctaatctgttcaaggaatcatctcaaggaacattcacatctagga 543 | ||||||||||| |||||||| || |||||||||||| ||| || || |||||| | | Sbjct: 90137 taccaaatgtaaaggctaatctattgaaggaatcatctgaagaaaagtttacatctggta 90196 Query: 544 gtgttggtttttatgctggt 563 |||||||||| | ||||||| Sbjct: 90197 gtgttggtttctttgctggt 90216 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 145 aggaatcgcccatcgcggccggcaacttggagcctgtggtggttgacgactccctatcga 204 ||||||||||| ||||||||||| | ||||||||||||||| |||| |||||||| |||| Sbjct: 88617 aggaatcgcccgtcgcggccggcgaattggagcctgtggtgattgatgactccctgtcga 88676 Query: 205 tttacaagg 213 ||||||||| Sbjct: 88677 tttacaagg 88685 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 278 aggtgggttgaagctgtgggaaggatcattggacttggtgaaaaccctaaattcagacat 337 ||||||||||||||| |||||||| ||| | ||||||||||| || |||| |||||||| Sbjct: 89456 aggtgggttgaagctctgggaaggttcactagacttggtgaagactttaaactcagacat 89515 Query: 338 caaagatgatcgactgcttatagaaggcaaac 369 |||||| || ||| ||||| |||||||||||| Sbjct: 89516 caaagaagaccgattgcttttagaaggcaaac 89547 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 382 taggatgtggacatggcctccctggtatctatgc 415 |||||||||||||||||||||||||||||||||| Sbjct: 89956 taggatgtggacatggcctccctggtatctatgc 89989 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 228 tctgatgttttcggggtaaaaaactctgatttggttccaggaaaatatgaaggt 281 ||||||||||| || || |||||||||||||| || ||||| |||||||||||| Sbjct: 89323 tctgatgtttttggagtcaaaaactctgatttagtcccagggaaatatgaaggt 89376 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 94 ccggccctccccctccgcctccgccgccagctgtcgaggtcctcctctccgagg 147 |||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 88441 ccggacctcctccgccgccgccgccgccagccgtcgaggtgctcctctccgagg 88494 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 40 tcttctccttctccaaccccagcggctccttcgggttcgg 79 ||||||||||||||||| ||| || |||||||| ||||| Sbjct: 88381 tcttctccttctccaactccaacgcttccttcggcttcgg 88420
>ref|NM_196909.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0071K18.2), mRNA Length = 2196 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||||||||| Sbjct: 104 ccctccccctccgcctccgccgcc 81
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||||||||| Sbjct: 28690 ccctccccctccgcctccgccgcc 28667
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||||||||| Sbjct: 16631552 ccctccccctccgcctccgccgcc 16631575 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcca 122 ||||||||||||||| ||||||||| Sbjct: 17917800 ccctccccctccgccgccgccgcca 17917776
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||||||||| Sbjct: 16639793 ccctccccctccgcctccgccgcc 16639816 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcca 122 ||||||||||||||| ||||||||| Sbjct: 17927053 ccctccccctccgccgccgccgcca 17927029
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcc 121 ||||||||||||||||||||||| Sbjct: 9375187 cctccccctccgcctccgccgcc 9375209 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 tccccctccgcctccgccgcc 121 ||||||||||||||||||||| Sbjct: 27449770 tccccctccgcctccgccgcc 27449790 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccg 119 ||||||||||||||||||||| Sbjct: 8699985 cctccccctccgcctccgccg 8699965 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 16460104 ccctccccctccgccgccgccgcc 16460127 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 7182299 cctccccctccgcctccgcc 7182280 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgc 120 ||||||| |||||||||||||||| Sbjct: 3085749 gccctccgcctccgcctccgccgc 3085772
>emb|AL807799.5| Zebrafish DNA sequence from clone CH211-257P7 in linkage group 2, complete sequence Length = 175342 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 482 catcccaaatgtaaaagctaatc 504 ||||||||||||||||||||||| Sbjct: 70752 catcccaaatgtaaaagctaatc 70730
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcc 121 ||||||||||||||||||||||| Sbjct: 72587 cctccccctccgcctccgccgcc 72609
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcc 121 ||||||||||||||||||||||| Sbjct: 9373308 cctccccctccgcctccgccgcc 9373330 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 tccccctccgcctccgccgcc 121 ||||||||||||||||||||| Sbjct: 27541093 tccccctccgcctccgccgcc 27541113 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccg 119 ||||||||||||||||||||| Sbjct: 8697820 cctccccctccgcctccgccg 8697800 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 16453737 ccctccccctccgccgccgccgcc 16453760 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 7180194 cctccccctccgcctccgcc 7180175 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgc 120 ||||||| |||||||||||||||| Sbjct: 3085860 gccctccgcctccgcctccgccgc 3085883
>emb|AL840636.10| Zebrafish DNA sequence from clone CH211-262K7 in linkage group 20, complete sequence Length = 174999 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 482 catcccaaatgtaaaagctaatc 504 ||||||||||||||||||||||| Sbjct: 70760 catcccaaatgtaaaagctaatc 70738
>ref|NM_117475.2| Arabidopsis thaliana unknown protein AT4G14000 mRNA, complete cds Length = 1227 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 452 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 511 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 512 gctaatctgt 521
>gb|AC130827.3| Mus musculus BAC clone RP23-405I7 from chromosome 13, complete sequence Length = 212140 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 480 accatcccaaatgtaaaagctaatctgttc 509 ||||||||||||| |||||||| ||||||| Sbjct: 76553 accatcccaaatgaaaaagctattctgttc 76582
>gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, complete genome Length = 131526 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 4785 cctccgcctccgcctccgccgccagc 4760
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 49594 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 49653 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 49654 gctaatctgt 49663
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 183809 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 183868 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 183869 gctaatctgt 183878
>emb|Z11662.1|BANPA61KD Autographa californica nuclear polyhedrosis virus gene for 61 kD viral protein Length = 2362 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 1431 cctccgcctccgcctccgccgccagc 1456
>emb|CR352245.9| Zebrafish DNA sequence from clone DKEY-153L11 in linkage group 16, complete sequence Length = 136903 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 ttcaaggaatcatctcaaggaa 528 |||||||||||||||||||||| Sbjct: 34565 ttcaaggaatcatctcaaggaa 34544
>emb|BX511161.6| Zebrafish DNA sequence from clone DKEY-248G17 in linkage group 16, complete sequence Length = 101801 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 507 ttcaaggaatcatctcaaggaa 528 |||||||||||||||||||||| Sbjct: 93642 ttcaaggaatcatctcaaggaa 93663
>gb|AY114714.1| Arabidopsis thaliana unknown protein (At4g14000) mRNA, complete cds Length = 1067 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 418 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 477 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 478 gctaatctgt 487
>emb|CR604092.1| full-length cDNA clone CS0DF001YJ20 of Fetal brain of Homo sapiens (human) Length = 1763 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccg 119 |||||||||||||||||||||| Sbjct: 98 ccctccccctccgcctccgccg 119
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 359 agaaggcaaacacatactagagttaggatgtgga 392 ||||||||||| |||| |||||||||| |||||| Sbjct: 3602244 agaaggcaaacgcatattagagttaggctgtgga 3602277
>gb|AY072417.1| Arabidopsis thaliana unknown protein (At4g14000) mRNA, complete cds Length = 1100 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 440 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 499 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 500 gctaatctgt 509
>gb|U64896.1|AFU64896 Anagrapha falcifera nuclear polyhedrosis virus protein-typrosine phosphatase, lef-2, polyhedrin, vp78 and protein kinase genes, complete cds Length = 6289 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 4478 cctccgcctccgcctccgccgccagc 4453
>gb|L22858.1|L22858 Autographa californica nucleopolyhedrovirus clone C6, complete genome Length = 133894 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 6078 cctccgcctccgcctccgccgccagc 6053
>emb|BX827894.1|CNS0A30D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1194 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 414 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 473 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 474 gctaatctgt 483
>emb|BX829113.1|CNS0A2AY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1138 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 432 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 491 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 492 gctaatctgt 501
>gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, complete sequence Length = 149481 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccg 119 |||||||||||||||||||||| Sbjct: 58945 ccctccccctccgcctccgccg 58966
>gb|AY086588.1| Arabidopsis thaliana clone 25991 mRNA, complete sequence Length = 1227 Score = 44.1 bits (22), Expect = 0.49 Identities = 58/70 (82%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttcttaggtgccttaccatcccaaatgtaaaa 497 ||||| || ||||| |||||||||||||||||| | || || ||||| || ||| | || Sbjct: 452 gttcatttccaggacttcaatgctgaggttcttcgatgtctcaccattccgaatctgaat 511 Query: 498 gctaatctgt 507 |||||||||| Sbjct: 512 gctaatctgt 521
>emb|AJ332895.1|HSA332895 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KA9C Length = 610 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccg 119 |||||||||||||||||||||| Sbjct: 149 ccctccccctccgcctccgccg 170
>gb|AF068270.1|AF068270 Rachiplusia ou nuclear polyhedrosis virus protein-tyrosine phosphatase (ptp), late expression factor-2 (lef-2), occlusion matrix protein (polh), capsid-associated protein, and protein kinase (pk1) genes, complete cds; and unknown genes Length = 7781 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 4627 cctccgcctccgcctccgccgccagc 4602
>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete sequence Length = 223059 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccg 119 |||||||||||||||||||||| Sbjct: 43521 ccctccccctccgcctccgccg 43542
>ref|NM_012326.2| Homo sapiens microtubule-associated protein, RP/EB family, member 3 (MAPRE3), mRNA Length = 1880 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccg 119 |||||||||||||||||||||| Sbjct: 108 ccctccccctccgcctccgccg 129
>gb|BC011557.1| Homo sapiens microtubule-associated protein, RP/EB family, member 3, mRNA (cDNA clone MGC:20025 IMAGE:4561018), complete cds Length = 1870 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccg 119 |||||||||||||||||||||| Sbjct: 93 ccctccccctccgcctccgccg 114
>gb|U02440.1|XXU02440 Cloning vector pBacPAK9, complete sequence Length = 5538 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 2144 cctccgcctccgcctccgccgccagc 2119
>gb|U55760.1|BTU55760 Baculovirus transfer vector pBacPAK-His3, complete sequence, beta-lactamase (bla) gene, complete cds Length = 5413 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 2079 cctccgcctccgcctccgccgccagc 2054
>gb|U55759.1|BTU55759 Baculovirus transfer vector pBacPAK-His2, complete sequence, beta-lactamase (bla) gene, complete cds Length = 5415 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 2081 cctccgcctccgcctccgccgccagc 2056
>gb|U55758.1|BTU55758 Baculovirus transfer vector pBacPAK-His1, complete sequence, beta-lactamase (bla) gene, complete cds Length = 5414 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 2080 cctccgcctccgcctccgccgccagc 2055
>gb|U02452.1|U02452 Cloning vector pAcUW31, complete sequence Length = 8532 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 3732 cctccgcctccgcctccgccgccagc 3707
>gb|U02450.1|U02450 Cloning vector pBacPAK1, complete sequence Length = 5461 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 2067 cctccgcctccgcctccgccgccagc 2042
>gb|U02446.1|U02446 Cloning vector pBacPAK8, complete sequence Length = 5538 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 2144 cctccgcctccgcctccgccgccagc 2119
>gb|M75679.1|NPHLACBD Autographa californica nuclear polyhedrosis virus beta-D-galactosidase gene, complete cds Length = 9430 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgccagc 124 ||||| |||||||||||||||||||| Sbjct: 6277 cctccgcctccgcctccgccgccagc 6252
>dbj|AB025186.1| Homo sapiens mRNA for EB3 protein, complete cds Length = 1880 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccg 119 |||||||||||||||||||||| Sbjct: 108 ccctccccctccgcctccgccg 129
>ref|XM_483212.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1799 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 328 ccctccccctccgcctccgcc 348
>ref|NM_187450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2922 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccg 119 ||||||||||||||||||||| Sbjct: 226 cctccccctccgcctccgccg 246
>ref|NM_197091.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0029C15.1), mRNA Length = 562 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcca 122 ||||||||||||||| ||||||||| Sbjct: 26 ccctccccctccgccgccgccgcca 2
>ref|XM_479640.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4982 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||| ||||||||||||||||| Sbjct: 127 gccctccgcctccgcctccgccgcc 151
>ref|XM_478415.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||||||||| ||||||||||| Sbjct: 387 gccctccccctccccctccgccgcc 363 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 380 ccctccccctccgccgccgccgcc 357
>gb|AC150860.4| Bos taurus BAC CH240-424I20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 165874 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 cgctcccggccctccccctcc 109 ||||||||||||||||||||| Sbjct: 26570 cgctcccggccctccccctcc 26550
>ref|XM_843872.1| PREDICTED: Canis familiaris similar to ankyrin repeat and BTB (POZ) domain containing 2, transcript variant 2 (LOC483430), mRNA Length = 3162 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 852 ccctccccctccgcctccgcc 832
>ref|XM_540548.2| PREDICTED: Canis familiaris similar to ankyrin repeat and BTB (POZ) domain containing 2, transcript variant 1 (LOC483430), mRNA Length = 2739 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 852 ccctccccctccgcctccgcc 832
>ref|XM_725828.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02963) partial mRNA Length = 2250 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 tgatttggttccaggaaaatatgaa 278 |||||| |||||||||||||||||| Sbjct: 1755 tgatttcgttccaggaaaatatgaa 1779
>ref|XM_740404.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105339.00.0) partial mRNA Length = 759 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 tgatttggttccaggaaaatatgaa 278 |||||| |||||||||||||||||| Sbjct: 297 tgattttgttccaggaaaatatgaa 321
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcca 122 ||||||||||||||| ||||||||| Sbjct: 14241 ccctccccctccgccgccgccgcca 14265
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccg 119 ||||||||||||||||||||| Sbjct: 43636 cctccccctccgcctccgccg 43616
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 10477282 ccctccccctccgcctccgcc 10477262 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||| ||||||||||| Sbjct: 22490984 ccctccccctcctcctccgccgcc 22491007 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 3946323 cctccgcctccgcctccgccgcca 3946300
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 24830775 ccctccccctccgcctccgcc 24830795 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||| ||||||||||||||||| Sbjct: 29921 gccctccgcctccgcctccgccgcc 29945
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||||||||| ||||||||||| Sbjct: 19834317 gccctccccctccccctccgccgcc 19834341 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 19834324 ccctccccctccgccgccgccgcc 19834347
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcca 122 |||||||||||| |||||||||||| Sbjct: 28303310 ccctccccctccccctccgccgcca 28303286 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 23269302 cctccgcctccgcctccgccgcca 23269325 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 8308665 cctccccctccgcctccgcc 8308684 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 |||||||| ||||||||||||||| Sbjct: 2040114 cctcccccgccgcctccgccgcca 2040091
>emb|BX829267.1|CNS0A4DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 438 gttcactttcaggatttcaatgctgaggttctt 470 ||||| || ||||| |||||||||||||||||| Sbjct: 438 gttcatttccaggacttcaatgctgaggttctt 470
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tccccctccgcctccgccgcc 121 ||||||||||||||||||||| Sbjct: 100744 tccccctccgcctccgccgcc 100724
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 131576 ccctccccctccgcctccgcc 131596
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcca 122 |||||||||||| |||||||||||| Sbjct: 15888 ccctccccctccccctccgccgcca 15864
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcca 122 |||||||||||| |||||||||||| Sbjct: 101339 ccctccccctccccctccgccgcca 101315
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||||||||| ||||||||||| Sbjct: 74476 gccctccccctccccctccgccgcc 74500 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 74483 ccctccccctccgccgccgccgcc 74506
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 35221 ccctccccctccgcctccgcc 35241
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||| ||||||||||||||||| Sbjct: 29921 gccctccgcctccgcctccgccgcc 29945
>dbj|AK120880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K12, full insert sequence Length = 4982 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||| ||||||||||||||||| Sbjct: 127 gccctccgcctccgcctccgccgcc 151
>dbj|AK105444.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-A11, full insert sequence Length = 1799 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 328 ccctccccctccgcctccgcc 348
>dbj|AK102726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105M03, full insert sequence Length = 938 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||||||||| ||||||||||| Sbjct: 391 gccctccccctcctcctccgccgcc 367
>dbj|AK069570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025A03, full insert sequence Length = 889 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 gccctccccctccgcctccgccgcc 121 ||||||||||||| ||||||||||| Sbjct: 388 gccctccccctccccctccgccgcc 364 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 381 ccctccccctccgccgccgccgcc 358
>dbj|AK065251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J08, full insert sequence Length = 4503 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 138 ccctccccctccgcctccgcc 158
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 10477164 ccctccccctccgcctccgcc 10477144 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||| ||||||||||| Sbjct: 22419329 ccctccccctcctcctccgccgcc 22419352 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 3946297 cctccgcctccgcctccgccgcca 3946274
>emb|AL772421.5|CNS08C9Z Oryza sativa chromosome 12, . BAC OJ1007_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130672 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 3088 ccctccccctccgcctccgcc 3068
>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130454 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgcc 118 ||||||||||||||||||||| Sbjct: 129783 ccctccccctccgcctccgcc 129763
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||||||||| |||||||||||| Sbjct: 1882177 cctccccctcctcctccgccgcca 1882200
>ref|XM_476260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 855 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 209 cctccgcctccgcctccgccgcca 232
>ref|XM_470931.1| Oryza sativa (japonica cultivar-group), mRNA Length = 744 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 511 ccctccccctccgccgccgccgcc 534
>ref|XM_507533.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1175_B01.8-1 mRNA Length = 2581 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 263 ccctccccctccgcctcctccgcc 240
>ref|XM_506986.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1175_B01.8-1 mRNA Length = 2610 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 263 ccctccccctccgcctcctccgcc 240
>ref|XM_467901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2124 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 265 ccctccccctccgcctcctccgcc 242
>ref|XM_466426.1| Oryza sativa (japonica cultivar-group), mRNA Length = 282 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 119 cctccgcctccgcctccgccgcca 96
>ref|XM_518475.1| PREDICTED: Pan troglodytes similar to transcriptional regulating factor 1 isoform 1; transcriptional regulating protein 132; rapa-2; rapa-1 (LOC462695), mRNA Length = 4734 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 2311 cctccgcctccgcctccgccgcca 2334
>ref|NM_193890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 504 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 272 cctccccctccgcctccgcc 253
>ref|XM_463512.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1803 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||||||||| |||||||||||| Sbjct: 161 cctccccctcctcctccgccgcca 138
>ref|NM_190796.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1356 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||| ||||||||||||||||| Sbjct: 39 ccctccgcctccgcctccgccgcc 16
>ref|NM_033502.1| Homo sapiens transcriptional regulating factor 1 (TRERF1), transcript variant 1, mRNA Length = 4395 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 2247 cctccgcctccgcctccgccgcca 2270
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctctgatgttttcggggta 245 |||||||||||||||||||| Sbjct: 160116 cctctgatgttttcggggta 160097
>gb|AY022938.1| Oryza sativa microsatellite MRG5263 containing (CTC)X9, closest to marker C1084, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 |||||||| ||||||||||||||| Sbjct: 124 cctcccccgccgcctccgccgcca 147
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 124229 ccctccccctccgccgccgccgcc 124206
>ref|XM_369714.1| Magnaporthe grisea 70-15 hypothetical protein (MG06229.4) partial mRNA Length = 777 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 635 cctcctcctccgcctccgccgcca 612
>ref|XM_959307.1| Neurospora crassa OR74A hypothetical protein (NCU00747.1) partial mRNA Length = 708 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||| ||||||||||| Sbjct: 178 ccctccccctcctcctccgccgcc 201
>ref|XM_324926.1| Neurospora crassa OR74A hypothetical protein (NCU00747.1) partial mRNA Length = 708 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||| ||||||||||| Sbjct: 178 ccctccccctcctcctccgccgcc 201
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 59308 cctccgcctccgcctccgccgcca 59331
>ref|NM_003494.2| Homo sapiens dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) (DYSF), mRNA Length = 6907 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctcccggccctccccctccgcctccgcc 118 ||||| |||||| ||||||||||||||| Sbjct: 3579 ctcccagccctcgccctccgcctccgcc 3552
>ref|XM_544753.2| PREDICTED: Canis familiaris similar to CG6232-PA (LOC487628), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccaggaaaatatgaaggtgg 283 |||||||||||||||||||| Sbjct: 553 ccaggaaaatatgaaggtgg 572
>ref|XM_989786.1| PREDICTED: Mus musculus RIKEN cDNA 9630037P07 gene (9630037P07Rik), mRNA Length = 2273 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ggcgccgctcccggccctccccct 107 ||||||| |||||||||||||||| Sbjct: 1070 ggcgccggtcccggccctccccct 1093
>gb|AC113470.14| Mus musculus chromosome 9, clone RP23-262N17, complete sequence Length = 202838 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tgttcaaggaatcatctcaaggaa 528 ||||||||| |||||||||||||| Sbjct: 61944 tgttcaaggcatcatctcaaggaa 61967 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tgttcaaggaatcatctcaaggaa 528 ||||||||| |||||||||||||| Sbjct: 61816 tgttcaaggcatcatctcaaggaa 61839 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tgttcaaggaatcatctcaaggaa 528 ||||||||| |||||||||||||| Sbjct: 61751 tgttcaaggcatcatctcaaggaa 61774 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tgttcaaggaatcatctcaaggaa 528 ||||||||| |||||||||||||| Sbjct: 61686 tgttcaaggcatcatctcaaggaa 61709 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tgttcaaggaatcatctcaaggaa 528 ||||||||| |||||||||||||| Sbjct: 61621 tgttcaaggcatcatctcaaggaa 61644 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tgttcaaggaatcatctcaaggaa 528 ||||||||| |||||||||||||| Sbjct: 61556 tgttcaaggcatcatctcaaggaa 61579 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tgttcaaggaatcatctcaaggaa 528 ||||||||| |||||||||||||| Sbjct: 61493 tgttcaaggcatcatctcaaggaa 61516
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 103649 cctccccctccgcctccgcc 103668
>gb|AC145856.2| Pan troglodytes BAC clone RP43-5P12 from 7, complete sequence Length = 185183 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 tcactttcaggatttcaatg 459 |||||||||||||||||||| Sbjct: 79966 tcactttcaggatttcaatg 79985
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 cccctccgcctccgccgccagctg 126 ||||||||||||||||||| |||| Sbjct: 144268 cccctccgcctccgccgcctgctg 144291
>gb|AC004901.1| Homo sapiens PAC clone RP5-817I18 from 7, complete sequence Length = 80288 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 tcactttcaggatttcaatg 459 |||||||||||||||||||| Sbjct: 31890 tcactttcaggatttcaatg 31871
>gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete sequence Length = 109479 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcttatagaaggcaaacaca 372 |||||||||||||||||||| Sbjct: 70804 gcttatagaaggcaaacaca 70823
>emb|AJ007670.1|HSA7670 Homo sapiens mRNA for LGMD2B protein Length = 5646 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctcccggccctccccctccgcctccgcc 118 ||||| |||||| ||||||||||||||| Sbjct: 1522 ctcccagccctcgccctccgcctccgcc 1495
>emb|AL645819.1| Human DNA sequence from clone RP1-256K24 on chromosome X, complete sequence Length = 94973 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tgatttggttccaggaaaat 273 |||||||||||||||||||| Sbjct: 17790 tgatttggttccaggaaaat 17809
>emb|AL359263.13| Human DNA sequence from clone RP13-88F20 on chromosome X Contains an adaptor-related protein complex 2, beta 1 subunit (AP2B1) pseudogene, complete sequence Length = 69518 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 56401 cctccccctccgcctccgcc 56382
>emb|AL162291.14| Human DNA sequence from clone RP11-402F1 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 98399 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cttctccttctccaacccca 60 |||||||||||||||||||| Sbjct: 13986 cttctccttctccaacccca 13967
>emb|AL096814.26|HSDJ139D8 Human DNA sequence from clone RP1-139D8 on chromosome 6p12.1-21.1 Contains genes for GUCA1A (guanylate cyclase activator 1A) and GUCA1B (guanylate cyclase activator 1B) both from retina, the 3' end of the TReP-132 gene for zinc finger transcription regulating protein, the MRPS10 gene for mitochondrial ribosomal protein S10, the 5' end the gene for a novel protein, the gene for a novel protein and two CpG Islands, complete sequence Length = 167078 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 36695 cctccgcctccgcctccgccgcca 36718
>emb|AL008733.10|HS163G9 Human DNA sequence from clone RP1-163G9 on chromosome 1p36.2-36.3 Contains two novel genes, the 5' end of the PRDM16 gene for PR domain containing 16 and two CpG islands, complete sequence Length = 143291 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cccggccctccccctccgcc 112 |||||||||||||||||||| Sbjct: 100654 cccggccctccccctccgcc 100673
>gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genomic sequence, complete sequence Length = 146775 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 7106 ccctccccctccgccgccgccgcc 7083
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgc 120 ||||||| |||||||||||||||| Sbjct: 8762 gccctccgcctccgcctccgccgc 8785
>gb|AC106914.5| Rattus norvegicus BAC CH230-12M19 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 235005 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 aggaatcatctcaaggaaca 530 |||||||||||||||||||| Sbjct: 184491 aggaatcatctcaaggaaca 184510
>gb|AC020654.23| Homo sapiens 12 BAC RP11-496H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160019 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gcaacttggagcctgtggtg 185 |||||||||||||||||||| Sbjct: 38309 gcaacttggagcctgtggtg 38328
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 gccctccccctccgcctccgccgc 120 ||||||| |||||||||||||||| Sbjct: 10512 gccctccgcctccgcctccgccgc 10489
>dbj|AK127493.1| Homo sapiens cDNA FLJ45586 fis, clone BRTHA3014000, highly similar to Rapa-1 Length = 3864 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 1667 cctccgcctccgcctccgccgcca 1690
>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185918 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gatcgactgcttatagaagg 364 |||||||||||||||||||| Sbjct: 155480 gatcgactgcttatagaagg 155461
>gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromosome 1, complete sequence Length = 192460 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cccggccctccccctccgcc 112 |||||||||||||||||||| Sbjct: 129749 cccggccctccccctccgcc 129730
>gb|AF297872.1|AF297872 Homo sapiens zinc finger transcription factor TReP-132 mRNA, complete cds Length = 4395 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 2247 cctccgcctccgcctccgccgcca 2270
>gb|AC090054.2|AC090054 Oryza sativa chromosome 9 clone PAC0645D04, complete sequence Length = 139050 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||| |||||||||||||| Sbjct: 102006 ccctcccccgccgcctccgccgcc 102029
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ggccctccccctccgcctcc 115 |||||||||||||||||||| Sbjct: 14725205 ggccctccccctccgcctcc 14725224
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 cccctccgcctccgccgccagctg 126 ||||||||||||||||||| |||| Sbjct: 24667366 cccctccgcctccgccgcctgctg 24667389
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 11334031 cctccgcctccgcctccgccgcca 11334054
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 32004883 ccctccccctccgcctcctccgcc 32004860 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 22605626 cctccgcctccgcctccgccgcca 22605649
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||||||||| |||||||||||| Sbjct: 37956291 cctccccctcctcctccgccgcca 37956268 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||| ||||||||||||||||| Sbjct: 37756910 ccctccgcctccgcctccgccgcc 37756887 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 26122477 cctccgcctccgcctccgccgcca 26122500 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||| ||||||||||||||||| Sbjct: 24424444 ccctccgcctccgcctccgccgcc 24424421 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 15669022 cctccccctccgcctccgcc 15669003 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 ctcccggccctccccctccgcctccgcc 118 ||||| ||||||| |||||||||||||| Sbjct: 1019334 ctccccgccctccacctccgcctccgcc 1019361
>gb|BC093551.1| Xenopus laevis Sox-D protein, mRNA (cDNA clone MGC:115030 IMAGE:6946836), complete cds Length = 1160 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||| ||||||||||| Sbjct: 58 ccctccccctcctcctccgccgcc 35
>gb|AC137630.9| Homo sapiens 3 BAC RP13-131K19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 120173 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 gctcccggccctccccctccgcctccgc 117 |||||||| ||||| ||||||||||||| Sbjct: 56315 gctcccgggcctccgcctccgcctccgc 56288
>gb|AC010147.11| Homo sapiens BAC clone RP11-356H17 from 2, complete sequence Length = 219086 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctcccggccctccccctccgcctccgcc 118 ||||| |||||| ||||||||||||||| Sbjct: 32273 ctcccagccctcgccctccgcctccgcc 32246
>gb|AF268970.1|AF268970S1 Mus musculus mitochondrial DNA polymerase gamma (Polg) gene, exons 1 and 2 and 5'UTR; nuclear gene for mitochondrial product Length = 2915 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 gccgctcccggccctccccctccg 110 ||||| |||||||||||||||||| Sbjct: 1197 gccgcgcccggccctccccctccg 1174
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 27894 cctccgcctccgcctccgccgcca 27917
>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0038D11 Length = 156465 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 126052 cctccgcctccgcctccgccgcca 126075
>gb|AC068195.6| Homo sapiens BAC clone RP11-114B24 from 2, complete sequence Length = 178147 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tttcaggatttcaatgctga 463 |||||||||||||||||||| Sbjct: 148653 tttcaggatttcaatgctga 148672
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 85 gcgccgctcccggccctccccctccgcctccgccgccagc 124 |||| ||||||||||||| | |||||||||| | |||||| Sbjct: 1390454 gcgcagctcccggccctcgcgctccgcctcctcggccagc 1390415
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 12039 cctccccctccgcctccgcc 12058
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 9052 cctccccctccgcctccgcc 9033
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||||||||| |||||||||||| Sbjct: 37235 cctccccctcctcctccgccgcca 37212
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||| ||||||||||||||||| Sbjct: 85211 ccctccgcctccgcctccgccgcc 85188
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 |||||||| ||||||||||||||| Sbjct: 60976 cctcccccgccgcctccgccgcca 60953
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 106919 cctccccctccgcctccgcc 106900
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||| ||||||||||||||||| Sbjct: 4828 ccctccgcctccgcctccgccgcc 4805
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 ctcccggccctccccctccgcctccgcc 118 ||||| ||||||| |||||||||||||| Sbjct: 57002 ctccccgccctccacctccgcctccgcc 57029
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgcc 118 |||||||||||||||||||| Sbjct: 102170 cctccccctccgcctccgcc 102189
>dbj|AP006727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0645D04 Length = 142890 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||| |||||||||||||| Sbjct: 105776 ccctcccccgccgcctccgccgcc 105799
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 104064 cctccgcctccgcctccgccgcca 104087
>gb|AY789625.1| Arundinella hirta voucher PI246756 USDA FL gene, partial cds Length = 827 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cctccgcctccgccgccagc 124 |||||||||||||||||||| Sbjct: 70 cctccgcctccgccgccagc 89
>gb|AY789600.1| Tripsacum andersonii FL2m gene, partial cds Length = 912 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 86 cgccgctcccggccctccccctccgcctccgccgcc 121 |||||| |||| ||||| ||||||||||||||||| Sbjct: 57 cgccgcgcccgcgcctccgcctccgcctccgccgcc 92
>gb|AY789591.1| Tripsacum zopilotense FL1 gene, partial cds Length = 941 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 70 cctccgcctccgcctccgccgcca 93
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 25258 ccctccccctccgcctcctccgcc 25235
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 53437 cctccgcctccgcctccgccgcca 53460
>dbj|AK121112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073I01, full insert sequence Length = 5984 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||| |||||||||||||| Sbjct: 245 ccctcccccgccgcctccgccgcc 222
>dbj|AK111900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038B16, full insert sequence Length = 2609 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 262 ccctccccctccgcctcctccgcc 239
>dbj|AK111627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115M15, full insert sequence Length = 2579 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 262 ccctccccctccgcctcctccgcc 239
>dbj|AK110612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-H05, full insert sequence Length = 1246 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 230 cctccgcctccgcctccgccgcca 253
>dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132G05, full insert sequence Length = 2348 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||||||||| |||||||||||| Sbjct: 470 cctccccctcctcctccgccgcca 447
>dbj|AK102248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088F07, full insert sequence Length = 3483 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccctccccctccgcctccgccgcc 121 ||||||||||||||| |||||||| Sbjct: 9 ccctccccctccgccgccgccgcc 32
>dbj|AK101834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069B21, full insert sequence Length = 1400 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tccccctccgcctccgccgccagc 124 ||||||||| |||||||||||||| Sbjct: 129 tccccctcctcctccgccgccagc 152
>dbj|AK100506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099L12, full insert sequence Length = 2123 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||||||||| ||||| Sbjct: 264 ccctccccctccgcctcctccgcc 241
>dbj|AK070248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O06, full insert sequence Length = 2761 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgc 120 ||||||| |||||||||||||||| Sbjct: 241 gccctccgcctccgcctccgccgc 264
>dbj|AK069536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022B22, full insert sequence Length = 1296 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 |||||||| ||||||||||||||| Sbjct: 214 cctcccccgccgcctccgccgcca 237
>dbj|AK067375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104L22, full insert sequence Length = 2584 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gccctccccctccgcctccgccgc 120 ||||||| |||||||||||||||| Sbjct: 180 gccctccgcctccgcctccgccgc 203
>dbj|AK066485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068J24, full insert sequence Length = 1693 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctccccctccgcctccgccgcca 122 |||||||| ||||||||||||||| Sbjct: 307 cctcccccgccgcctccgccgcca 330
>dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E01, full insert sequence Length = 2017 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||| ||||||||||||||||| Sbjct: 220 ccctccgcctccgcctccgccgcc 197
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ccccctccgcctccgccgcc 121 |||||||||||||||||||| Sbjct: 87631 ccccctccgcctccgccgcc 87650
>gb|AE003591.4| Drosophila melanogaster chromosome 3L, section 72 of 83 of the complete sequence Length = 301136 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gatcgactgcttatagaagg 364 |||||||||||||||||||| Sbjct: 37791 gatcgactgcttatagaagg 37772
>gb|AF075575.1|AF075575 Homo sapiens dysferlin mRNA, complete cds Length = 6911 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctcccggccctccccctccgcctccgcc 118 ||||| |||||| ||||||||||||||| Sbjct: 3583 ctcccagccctcgccctccgcctccgcc 3556
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 cccctccgcctccgccgccagctg 126 ||||||||||||||||||| |||| Sbjct: 24979036 cccctccgcctccgccgcctgctg 24979059
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||||||||| ||||||||||| Sbjct: 16550 ccctccccctcctcctccgccgcc 16527
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ggccctccccctccgcctcc 115 |||||||||||||||||||| Sbjct: 64859 ggccctccccctccgcctcc 64878
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||| |||||||||||||||||| Sbjct: 108299 cctccgcctccgcctccgccgcca 108276
>emb|Z72005.1|HSJ256K2B Human DNA sequence from cosmid J256K24, between markers DXS6791 and DXS8038 on chromosome X contains EST Length = 31252 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tgatttggttccaggaaaat 273 |||||||||||||||||||| Sbjct: 13463 tgatttggttccaggaaaat 13444
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctccccctccgcctccgccgcca 122 ||||||||||| |||||||||||| Sbjct: 52567 cctccccctcctcctccgccgcca 52544
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccctccccctccgcctccgccgcc 121 |||||| ||||||||||||||||| Sbjct: 16158 ccctccgcctccgcctccgccgcc 16135
>dbj|AK074104.1| Homo sapiens mRNA for FLJ00175 protein Length = 4645 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 ctcccggccctccccctccgcctccgcc 118 ||||| |||||| ||||||||||||||| Sbjct: 1856 ctcccagccctcgccctccgcctccgcc 1829 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,236,986 Number of Sequences: 3902068 Number of extensions: 5236986 Number of successful extensions: 130740 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 195 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127253 Number of HSP's gapped (non-prelim): 3336 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
