| Clone Name | bags7j11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1570 Score = 531 bits (268), Expect = e-148 Identities = 470/536 (87%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 3 atggttattgacc-cattaattatgcctccactgagtctgaaggggatcacaccttgatt 61 ||||||||||| | |||||||||||| ||||||| ||||||| ||||| || |||||| Sbjct: 472 atggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttgatt 531 Query: 62 gctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcct 121 ||||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||| Sbjct: 532 gctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccct 591 Query: 122 gtattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggtt 181 ||||| ||||| || ||||||||||||| |||||||| ||||||||||| |||| || Sbjct: 592 gtattatttcggggaattggacatgcggttaatccatctaacagcttggtcctgaaagtc 651 Query: 182 ctatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttcca 241 |||| ||||| ||||| || || |||||||||||| | |||||||||| ||| |||| Sbjct: 652 ttatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctcca 711 Query: 242 tctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgt 301 ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 712 tctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgg 771 Query: 302 gtgttgatatctggatcactggatttgtttagcaacaggttcctcaagtctggtgtgcag 361 || ||||||||||||||||| ||| ||||||||||||||||||| || |||||||| ||| Sbjct: 772 gtcttgatatctggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcag 831 Query: 362 aaggcaggcagcaaaatgagccatgacaaagctggaaatgaacaatttgtgacagagaca 421 ||||| || ||||| || || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 832 aaggccggtagcaagataaggcatgagaaagctggaaatgaacaatttgtgacagaaaca 891 Query: 422 agcaaatgggtcttccatgagaggggtcatctgaaggcagtgaatgtcaggcaccataag 481 |||||||||||||||||||||||||| ||||| |||||||||||||||| ||| | ||| Sbjct: 892 agcaaatgggtcttccatgagaggggccatctaaaggcagtgaatgtcaagcataacaag 951 Query: 482 gttggggagacagatgaacctagcatgtaccgcatcaatgatgacttggaatactc 537 |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 952 gttggggagacaaatgagcctggcatgtaccgcatcaatgatgacttggaatactc 1007
>ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_A05.4 mRNA Length = 1648 Score = 531 bits (268), Expect = e-148 Identities = 470/536 (87%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 3 atggttattgacc-cattaattatgcctccactgagtctgaaggggatcacaccttgatt 61 ||||||||||| | |||||||||||| ||||||| ||||||| ||||| || |||||| Sbjct: 479 atggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttgatt 538 Query: 62 gctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcct 121 ||||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||| Sbjct: 539 gctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccct 598 Query: 122 gtattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggtt 181 ||||| ||||| || ||||||||||||| |||||||| ||||||||||| |||| || Sbjct: 599 gtattatttcggggaattggacatgcggttaatccatctaacagcttggtcctgaaagtc 658 Query: 182 ctatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttcca 241 |||| ||||| ||||| || || |||||||||||| | |||||||||| ||| |||| Sbjct: 659 ttatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctcca 718 Query: 242 tctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgt 301 ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 719 tctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgg 778 Query: 302 gtgttgatatctggatcactggatttgtttagcaacaggttcctcaagtctggtgtgcag 361 || ||||||||||||||||| ||| ||||||||||||||||||| || |||||||| ||| Sbjct: 779 gtcttgatatctggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcag 838 Query: 362 aaggcaggcagcaaaatgagccatgacaaagctggaaatgaacaatttgtgacagagaca 421 ||||| || ||||| || || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 839 aaggccggtagcaagataaggcatgagaaagctggaaatgaacaatttgtgacagaaaca 898 Query: 422 agcaaatgggtcttccatgagaggggtcatctgaaggcagtgaatgtcaggcaccataag 481 |||||||||||||||||||||||||| ||||| |||||||||||||||| ||| | ||| Sbjct: 899 agcaaatgggtcttccatgagaggggccatctaaaggcagtgaatgtcaagcataacaag 958 Query: 482 gttggggagacagatgaacctagcatgtaccgcatcaatgatgacttggaatactc 537 |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 959 gttggggagacaaatgagcctggcatgtaccgcatcaatgatgacttggaatactc 1014
>dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E02, full insert sequence Length = 1648 Score = 531 bits (268), Expect = e-148 Identities = 470/536 (87%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 3 atggttattgacc-cattaattatgcctccactgagtctgaaggggatcacaccttgatt 61 ||||||||||| | |||||||||||| ||||||| ||||||| ||||| || |||||| Sbjct: 479 atggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttgatt 538 Query: 62 gctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcct 121 ||||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||| Sbjct: 539 gctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccct 598 Query: 122 gtattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggtt 181 ||||| ||||| || ||||||||||||| |||||||| ||||||||||| |||| || Sbjct: 599 gtattatttcggggtattggacatgcggttaatccatctaacagcttggtcctgaaagtc 658 Query: 182 ctatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttcca 241 |||| ||||| ||||| || || |||||||||||| | |||||||||| ||| |||| Sbjct: 659 ttatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctcca 718 Query: 242 tctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgt 301 ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 719 tctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgg 778 Query: 302 gtgttgatatctggatcactggatttgtttagcaacaggttcctcaagtctggtgtgcag 361 || ||||||||||||||||| ||| ||||||||||||||||||| || |||||||| ||| Sbjct: 779 gtcttgatatctggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcag 838 Query: 362 aaggcaggcagcaaaatgagccatgacaaagctggaaatgaacaatttgtgacagagaca 421 ||||| || ||||| || || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 839 aaggccggtagcaagataaggcatgagaaagctggaaatgaacaatttgtgacagaaaca 898 Query: 422 agcaaatgggtcttccatgagaggggtcatctgaaggcagtgaatgtcaggcaccataag 481 |||||||||||||||||||||||||| ||||| |||||||||||||||| ||| | ||| Sbjct: 899 agcaaatgggtcttccatgagaggggccatctaaaggcagtgaatgtcaagcataacaag 958 Query: 482 gttggggagacagatgaacctagcatgtaccgcatcaatgatgacttggaatactc 537 |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 959 gttggggagacaaatgagcctggcatgtaccgcatcaatgatgacttggaatactc 1014
>dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003F07, full insert sequence Length = 1570 Score = 523 bits (264), Expect = e-145 Identities = 469/536 (87%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 3 atggttattgacc-cattaattatgcctccactgagtctgaaggggatcacaccttgatt 61 ||||||||||| | |||||||||||| ||||||| ||||||| ||||| || |||||| Sbjct: 472 atggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttgatt 531 Query: 62 gctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgaggctcct 121 ||||| ||||| || || ||||||||||||||| ||||||| || || |||||||| ||| Sbjct: 532 gctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccct 591 Query: 122 gtattgtttcgagggattggacatgcggccaatccatccaacagcttggttttgaaggtt 181 ||||| ||||| || ||||||||||||| |||||||| ||||||||||| |||| || Sbjct: 592 gtattatttcggggaattggacatgcggttaatccatctaacagcttggtcctgaaagtc 651 Query: 182 ctatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttcca 241 |||| ||||| ||||| || || |||||||||||| | |||||||||| ||| |||| Sbjct: 652 ttatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctcca 711 Query: 242 tctctcacagggtcggccatatcactggtttctgttatgcaggctaggaacaatgctcgt 301 ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 712 tctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgg 771 Query: 302 gtgttgatatctggatcactggatttgtttagcaacaggttcctcaagtctggtgtgcag 361 || ||||||||||||||||| ||| ||||||||||||||||||| || |||||||| ||| Sbjct: 772 gtcttgatatctggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcag 831 Query: 362 aaggcaggcagcaaaatgagccatgacaaagctggaaatgaacaatttgtgacagagaca 421 ||||| || ||||| || || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 832 aaggccggtagcaagataaggcatgagaaagctggaaatgaacaatttgtgacagaaaca 891 Query: 422 agcaaatgggtcttccatgagaggggtcatctgaaggcagtgaatgtcaggcaccataag 481 |||||||||||||||||||||||||| ||||| |||||||||||||||| ||| | ||| Sbjct: 892 agcaaatgggtcttccatgagaggggccatctaaaggcagtgaatgtcaagcataacaag 951 Query: 482 gttggggagacagatgaacctagcatgtaccgcatcaatgatgacttggaatactc 537 |||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||| Sbjct: 952 gttggggagacaaatgagcctggcatgcaccgcatcaatgatgacttggaatactc 1007
>gb|BT017639.1| Zea mays clone EL01N0438G02.c mRNA sequence Length = 1151 Score = 389 bits (196), Expect = e-105 Identities = 415/488 (85%) Strand = Plus / Plus Query: 50 cacaccttgattgctggcgatgatctgattcagtcagatgtgatattggggtccaaaaag 109 ||||||||||||||||| |||||||| || || || ||||||||| ||||||| ||||| Sbjct: 1 cacaccttgattgctggtgatgatcttatccattcggatgtgatactggggtctgaaaag 60 Query: 110 attgaggctcctgtattgtttcgagggattggacatgcggccaatccatccaacagcttg 169 |||||||||||||||||||||||||| |||||||| ||| |||||||| ||||| ||| Sbjct: 61 attgaggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttg 120 Query: 170 gttttgaaggttctatctgcctcgccgtcggcgtattcagcaaacccagggactaagttg 229 ||| ||||||||||||| ||||| || || || |||||||| || ||| ||||||||| Sbjct: 121 gttctgaaggttctatcagcctctccatcagcatattcagctaatccaaagactaagtta 180 Query: 230 gcatccgttccatctctcacagggtcggccatatcactggtttctgttatgcaggctagg 289 || || |||||| ||||| ||||| || |||||| ||||||| ||||||||||| || Sbjct: 181 gcgtctcctccatcgctcactgggtcagctatatcattggtttcggttatgcaggcaaga 240 Query: 290 aacaatgctcgtgtgttgatatctggatcactggatttgtttagcaacaggttcctcaag 349 || |||||||| ||| || ||||||||||||| ||| ||||||||||| ||||||| ||| Sbjct: 241 aataatgctcgggtgctgctatctggatcactcgatctgtttagcaaccggttcctgaag 300 Query: 350 tctggtgtgcagaaggcaggcagcaaaatgagccatgacaaagctggaaatgaacaattt 409 |||||||| || ||||| | ||||||| || |||| | ||||||||| || |||||| Sbjct: 301 tctggtgttcaaaaggctgatagcaaaacaagatatgagagagctggaaacgagcaattt 360 Query: 410 gtgacagagacaagcaaatgggtcttccatgagaggggtcatctgaaggcagtgaatgtc 469 ||| ||||||||||||||||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 361 gtggcagagacaagcaaatgggttttccatgagaggggacatctaaaggctgttaatgtt 420 Query: 470 aggcaccataaggttggggagacagatgaacctagcatgtaccgcatcaatgatgacttg 529 ||||| || ||||||||||||||| ||||||| ||||||||||||| ||||||||| || Sbjct: 421 aggcatcacaaggttggggagacaaatgaaccaggcatgtaccgcattaatgatgacctg 480 Query: 530 gaatactc 537 |||||||| Sbjct: 481 gaatactc 488
>gb|AY103792.1| Zea mays PCO149739 mRNA sequence Length = 2093 Score = 377 bits (190), Expect = e-101 Identities = 421/498 (84%) Strand = Plus / Plus Query: 40 tgaaggggatcacaccttgattgctggcgatgatctgattcagtcagatgtgatattggg 99 |||||| |||||||||||||||||||| |||||||| || || || ||||||||| | || Sbjct: 832 tgaaggtgatcacaccttgattgctggtgatgatcttatccattcggatgtgatactagg 891 Query: 100 gtccaaaaagattgaggctcctgtattgtttcgagggattggacatgcggccaatccatc 159 ||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 892 gtctgaaaagattgaggctcctgtattgtttcgaggaattggacacatggctaatccatc 951 Query: 160 caacagcttggttttgaaggttctatctgcctcgccgtcggcgtattcagcaaacccagg 219 ||||| |||||| ||||||||||||| ||||| || || || |||||||| || ||| Sbjct: 952 aaacagtttggttctgaaggttctatcagcctctccatcagcatattcagctaatccaaa 1011 Query: 220 gactaagttggcatccgttccatctctcacagggtcggccatatcactggtttctgttat 279 ||||||||| || || |||||| ||||| ||||| || |||||| ||||||| ||||| Sbjct: 1012 gactaagttagcgtctcctccatcgctcactgggtcagctatatcattggtttcggttat 1071 Query: 280 gcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaacag 339 |||||| || || |||||||| ||| || ||||||||||||| ||| ||||||||||| | Sbjct: 1072 gcaggcaagaaataatgctcgggtgctgctatctggatcactcgatctgtttagcaaccg 1131 Query: 340 gttcctcaagtctggtgtgcagaaggcaggcagcaaaatgagccatgacaaagctggaaa 399 |||||| ||||||||||| || ||||| | ||||||| || |||| | ||||||||| Sbjct: 1132 gttcctgaagtctggtgttcaaaaggctgatagcaaaacaagatatgagagagctggaaa 1191 Query: 400 tgaacaatttgtgacagagacaagcaaatgggtcttccatgagaggggtcatctgaaggc 459 || ||||||||| |||||| |||||||||||| |||||||||||||| ||||| ||||| Sbjct: 1192 cgagcaatttgtggcagagataagcaaatgggttttccatgagaggggacatctaaaggc 1251 Query: 460 agtgaatgtcaggcaccataaggttggggagacagatgaacctagcatgtaccgcatcaa 519 || ||||| ||||| || |||||||||||||| ||||||| ||||||||||||| || Sbjct: 1252 tgttaatgttaggcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaa 1311 Query: 520 tgatgacttggaatactc 537 ||||||| |||||||||| Sbjct: 1312 tgatgacctggaatactc 1329
>gb|BT017987.1| Zea mays clone EL01N0525H08.c mRNA sequence Length = 1602 Score = 317 bits (160), Expect = 2e-83 Identities = 419/500 (83%), Gaps = 4/500 (0%) Strand = Plus / Plus Query: 40 tgaaggggatcacaccttgattgctggcgatgatctgattcagtcagatgtgatattggg 99 |||||| |||||||||||||||||||| |||||||| || || || ||||||||| |||| Sbjct: 477 tgaaggtgatcacaccttgattgctggtgatgatcttatccattcggatgtgatactggg 536 Query: 100 gtccaaaaagattgaggctcctgtattgtttcgagggattggacatgcggccaatccatc 159 ||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 537 gtctgaaaagattgaggctcctgtattgtttcgaggaattggacacatggctaatccatc 596 Query: 160 caacagcttggttttgaaggttctatctgcctcgccgtcggcgtattcagcaaacccagg 219 ||||| |||||| ||||||||||||| ||||| || || || |||||||| || ||| Sbjct: 597 aaacagtttggttctgaaggttctatcagcctctccatcagcatattcagctaatccaaa 656 Query: 220 gactaagttggcatccgttccatctctcacagggtcggccatatcactggtttctgttat 279 ||||||||| || || |||||| ||||| ||||| || |||||| ||||||| ||||| Sbjct: 657 gactaagttagcgtctcctccatcgctcactgggtcagctatatcattggtttcggttat 716 Query: 280 gcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgt-ttagcaaca 338 |||||| || || |||||||| ||| || ||||||||||||| ||| ||| |||||| | Sbjct: 717 gcaggcaagaaataatgctcgggtgctgctatctggatcactcgatctgttttagcacc- 775 Query: 339 ggttcctcaagtctggtgtgcagaagg-caggcagcaaaatgagccatgacaaagctgga 397 |||||| |||||||||| || |||| | | ||||||| || |||| | ||||||| Sbjct: 776 ggttccctgagtctggtgttcaaaagggctgatagcaaaac-agatatgagagagctgga 834 Query: 398 aatgaacaatttgtgacagagacaagcaaatgggtcttccatgagaggggtcatctgaag 457 || || ||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| Sbjct: 835 aacgagcaatttgtggcagagataagcaaatggggtttccatgagaggggacatctaaag 894 Query: 458 gcagtgaatgtcaggcaccataaggttggggagacagatgaacctagcatgtaccgcatc 517 || || ||||| ||||| || ||||||||||||||| ||||||| ||||||||||||| Sbjct: 895 gctgttaatgttaggcatcacaaggttggggagacaaatgaaccaggcatgtaccgcatt 954 Query: 518 aatgatgacttggaatactc 537 ||||||||| |||||||||| Sbjct: 955 aatgatgacctggaatactc 974
>gb|BT016706.1| Zea mays clone Contig539 mRNA sequence Length = 936 Score = 218 bits (110), Expect = 1e-53 Identities = 266/318 (83%) Strand = Plus / Plus Query: 40 tgaaggggatcacaccttgattgctggcgatgatctgattcagtcagatgtgatattggg 99 |||||| |||||||||||||||| ||| |||||||| |||||||||||||| ||| |||| Sbjct: 615 tgaaggcgatcacaccttgattgttggtgatgatcttattcagtcagatgtcatactggg 674 Query: 100 gtccaaaaagattgaggctcctgtattgtttcgagggattggacatgcggccaatccatc 159 ||| |||||||| |||||||||||||| ||||| || |||||||| |||| |||||||| Sbjct: 675 gtctaaaaagatcgaggctcctgtattatttcgtggaattggacacacggctaatccatc 734 Query: 160 caacagcttggttttgaaggttctatctgcctcgccgtcggcgtattcagcaaacccagg 219 ||||| |||||| |||| || ||||||||||| || || || || ||||| |||||| Sbjct: 735 aaacagtttggttatgaaagtcctatctgcctctccatcagcatactcagctaacccaaa 794 Query: 220 gactaagttggcatccgttccatctctcacagggtcggccatatcactggtttctgttat 279 ||||||||| | | |||||| || || ||||| || |||||| ||||||| ||||| Sbjct: 795 gactaagttatcgttgcctccatcgcttactgggtcagctatatcattggtttcggttat 854 Query: 280 gcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaacag 339 |||||| || || |||||||| ||| || ||||||||||||| ||| | ||||||||| | Sbjct: 855 gcaggcaagaaataatgctcgggtgctgctatctggatcacttgatctttttagcaaccg 914 Query: 340 gttcctcaagtctggtgt 357 |||||| ||||||||||| Sbjct: 915 gttcctgaagtctggtgt 932
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 383 catgacaaagctggaaatgaacaatttgtgacagagacaagcaaatgggtcttccatgag 442 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5920581 catgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgag 5920640 Query: 443 aggggtcatctgaagg 458 ||||| ||||| |||| Sbjct: 5920641 aggggccatctaaagg 5920656 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 183 tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 242 |||| ||||| ||||| || || |||||||||||| | |||||||||| ||| ||||| Sbjct: 5919357 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 5919416 Query: 243 ctctcacagggtcggccatatcactggtttctgttatgcagg 284 |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5919417 ctctcacagggtcggctatatcactggtttctgttatgcagg 5919458 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 456 aggcagtgaatgtcaggcaccataaggttggggagacagatgaacctagcatgtaccgca 515 ||||||||||||||| ||| | ||||||||||||||| |||| ||| |||||||||||| Sbjct: 5920763 aggcagtgaatgtcaagcataacaaggttggggagacaaatgagcctggcatgtaccgca 5920822 Query: 516 tcaatgatgacttgg 530 ||||||||||||||| Sbjct: 5920823 tcaatgatgacttgg 5920837 Score = 85.7 bits (43), Expect = 1e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 3 atggttattgacc-cattaattatgcctccactgagtctgaaggggatcacaccttgatt 61 ||||||||||| | |||||||||||| ||||||| ||||||| ||||| || |||||| Sbjct: 5918629 atggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttgatt 5918688 Query: 62 gctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgagg 116 ||||| ||||| || || ||||||||||||||| ||||||| || || ||||||| Sbjct: 5918689 gctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgagg 5918743 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 279 tgcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaaca 338 ||||||| || ||||||||||| || ||||||||||||||||| ||| |||||||||||| Sbjct: 5919890 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaaca 5919949 Query: 339 ggt 341 ||| Sbjct: 5919950 ggt 5919952 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 114 aggctcctgtattgtttcgagggattggacatgcggccaatccatccaacagcttggt 171 |||| |||||||| ||||| || ||||||||||||| |||||||| ||||||||||| Sbjct: 5919166 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 5919223
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 383 catgacaaagctggaaatgaacaatttgtgacagagacaagcaaatgggtcttccatgag 442 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 63029 catgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgag 63088 Query: 443 aggggtcatctgaagg 458 ||||| ||||| |||| Sbjct: 63089 aggggccatctaaagg 63104 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 183 tatctgcctcgccgtcggcgtattcagcaaacccagggactaagttggcatccgttccat 242 |||| ||||| ||||| || || |||||||||||| | |||||||||| ||| ||||| Sbjct: 61805 tatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccat 61864 Query: 243 ctctcacagggtcggccatatcactggtttctgttatgcagg 284 |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 61865 ctctcacagggtcggctatatcactggtttctgttatgcagg 61906 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 456 aggcagtgaatgtcaggcaccataaggttggggagacagatgaacctagcatgtaccgca 515 ||||||||||||||| ||| | ||||||||||||||| |||| ||| |||||||||||| Sbjct: 63211 aggcagtgaatgtcaagcataacaaggttggggagacaaatgagcctggcatgtaccgca 63270 Query: 516 tcaatgatgacttgg 530 ||||||||||||||| Sbjct: 63271 tcaatgatgacttgg 63285 Score = 85.7 bits (43), Expect = 1e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 3 atggttattgacc-cattaattatgcctccactgagtctgaaggggatcacaccttgatt 61 ||||||||||| | |||||||||||| ||||||| ||||||| ||||| || |||||| Sbjct: 61077 atggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttgatt 61136 Query: 62 gctggcgatgatctgattcagtcagatgtgatattggggtccaaaaagattgagg 116 ||||| ||||| || || ||||||||||||||| ||||||| || || ||||||| Sbjct: 61137 gctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgagg 61191 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 279 tgcaggctaggaacaatgctcgtgtgttgatatctggatcactggatttgtttagcaaca 338 ||||||| || ||||||||||| || ||||||||||||||||| ||| |||||||||||| Sbjct: 62338 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaaca 62397 Query: 339 ggt 341 ||| Sbjct: 62398 ggt 62400 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 114 aggctcctgtattgtttcgagggattggacatgcggccaatccatccaacagcttggt 171 |||| |||||||| ||||| || ||||||||||||| |||||||| ||||||||||| Sbjct: 61614 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 61671
>ref|NM_126066.3| Arabidopsis thaliana DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase AT5G66680 (DGL1) mRNA, complete cds Length = 1696 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 929 aagcaaatgggtcttccacgaaaggggccatctgaaggc 967
>gb|AY150381.1| Arabidopsis thaliana putative dolichyl-di-phosphooligosaccharide glycotransferase (oligosaccharyltransferase) (At5g66680) mRNA, complete cds Length = 1345 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 843 aagcaaatgggtcttccacgaaaggggccatctgaaggc 881
>gb|AY034944.1| Arabidopsis thaliana putative dolichyl-di-phosphooligosaccharide-protein glycotransferase (At5g66680) mRNA, complete cds Length = 1608 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 929 aagcaaatgggtcttccacgaaaggggccatctgaaggc 967
>gb|AF428338.1|AF428338 Arabidopsis thaliana AT5g66680/MSN2_7 mRNA, complete cds Length = 1544 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 884 aagcaaatgggtcttccacgaaaggggccatctgaaggc 922
>emb|BX831000.1|CNS0A0SR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1640 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 871 aagcaaatgggtcttccacgaaaggggccatctgaaggc 909
>emb|BX832898.1|CNS0A0F3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1468 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 863 aagcaaatgggtcttccacgaaaggggccatctgaaggc 901
>emb|BX831189.1|CNS09YSI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS67ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1510 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 883 aagcaaatgggtcttccacgaaaggggccatctgaaggc 921
>gb|AY085807.1| Arabidopsis thaliana clone 18419 mRNA, complete sequence Length = 1540 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaaggc 459 |||||||||||||||||| || ||||| ||||||||||| Sbjct: 882 aagcaaatgggtcttccacgaaaggggccatctgaaggc 920
>dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN2 Length = 62927 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 421 aagcaaatgggtcttccatgagaggggtcatctgaagg 458 |||||||||||||||||| || ||||| |||||||||| Sbjct: 24286 aagcaaatgggtcttccacgaaaggggccatctgaagg 24249
>gb|AF238380.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 158698 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 473 caccataaggttggggagacagatg 497 ||||||||||||||||||||||||| Sbjct: 148896 caccataaggttggggagacagatg 148920
>gb|AF222686.1|AF222686 Homo sapiens chromosome X PAC K6166 map Xp11.23, complete sequence Length = 122181 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 473 caccataaggttggggagacagatg 497 ||||||||||||||||||||||||| Sbjct: 28658 caccataaggttggggagacagatg 28682
>gb|BT016870.1| Zea mays clone Contig703 mRNA sequence Length = 911 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gggagacagatgaacctagcatgtaccgcatcaatgatgacttggaatactc 537 ||||||| ||||||| ||||||||||||| || |||||| |||||||||| Sbjct: 1 gggagaccaatgaaccaggcatgtaccgcattaacgatgacctggaatactc 52
>gb|AY175374.1| Branchiostoma belcheri tsingtaunese dolichyl-diphosphooligosaccharide--protein glycotransferase mRNA, complete cds Length = 1987 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 caggctaggaacaatgctcgtgtg 304 |||||||||||||||||||||||| Sbjct: 682 caggctaggaacaatgctcgtgtg 705
>ref|XM_508695.1| PREDICTED: Pan troglodytes similar to KIAA1731 protein (LOC451482), mRNA Length = 5397 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 4111 aaagctggaaatgaacaattt 4091
>gb|AC087379.4| Homo sapiens chromosome 11, clone RP11-396O20, complete sequence Length = 167699 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 aaggcagtgaatgtcaggcac 475 ||||||||||||||||||||| Sbjct: 106179 aaggcagtgaatgtcaggcac 106199
>dbj|AK126805.1| Homo sapiens cDNA FLJ44855 fis, clone BRACE3052486 Length = 3016 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 2501 aaagctggaaatgaacaattt 2521
>dbj|AK098232.1| Homo sapiens cDNA FLJ40913 fis, clone UTERU2005446 Length = 2294 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 1283 aaagctggaaatgaacaattt 1263
>dbj|AK095859.1| Homo sapiens cDNA FLJ38540 fis, clone HCHON2001497 Length = 2230 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 1028 aaagctggaaatgaacaattt 1008
>dbj|AK095218.1| Homo sapiens cDNA FLJ37899 fis, clone CD34C3000314 Length = 2890 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 1688 aaagctggaaatgaacaattt 1668
>gb|AF541963.1| Glycine max cv Williams 82 BAC clone Gm_ISb001_091_F11, complete sequence Length = 118773 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cagatgtgatattggggtcca 104 ||||||||||||||||||||| Sbjct: 37624 cagatgtgatattggggtcca 37604
>dbj|AK057804.1| Homo sapiens cDNA FLJ25075 fis, clone CBL06008 Length = 1443 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 238 aaagctggaaatgaacaattt 218
>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete sequence Length = 193227 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 190033 aaagctggaaatgaacaattt 190013
>emb|AL833615.1|HSM804928 Homo sapiens mRNA; cDNA DKFZp686D0673 (from clone DKFZp686D0673) Length = 3169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 2639 aaagctggaaatgaacaattt 2659
>gb|AC122301.4| Mus musculus BAC clone RP23-276C6 from 10, complete sequence Length = 179801 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 agaaggcaggcagcaaaatga 380 ||||||||||||||||||||| Sbjct: 44562 agaaggcaggcagcaaaatga 44542
>dbj|AB051518.2| Homo sapiens mRNA for KIAA1731 protein, partial cds Length = 7981 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aaagctggaaatgaacaattt 409 ||||||||||||||||||||| Sbjct: 6779 aaagctggaaatgaacaattt 6759
>gb|AC114666.31| Mus musculus chromosome 5, clone RP24-175N6, complete sequence Length = 193158 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 gcttggttttgaaggttctatctg 188 |||||||||| ||||||||||||| Sbjct: 167326 gcttggtttttaaggttctatctg 167303
>gb|BC104674.1| Rattus norvegicus hydrocephalus-inducing protein, mRNA (cDNA clone IMAGE:7304622), partial cds Length = 1840 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tctgaaggggatcacacctt 57 |||||||||||||||||||| Sbjct: 1588 tctgaaggggatcacacctt 1607
>gb|AC147206.2| Xenopus tropicalis clone CH216-39C21, complete sequence Length = 167795 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ctgattcagtcagatgtgat 93 |||||||||||||||||||| Sbjct: 25428 ctgattcagtcagatgtgat 25447
>gb|AC127546.4| Mus musculus BAC clone RP24-485N8 from chromosome 7, complete sequence Length = 151861 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 agcaaatgggtcttccatga 441 |||||||||||||||||||| Sbjct: 65738 agcaaatgggtcttccatga 65757
>gb|AC147170.3| Xenopus tropicalis clone CH216-154J22, complete sequence Length = 163973 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ctgattcagtcagatgtgat 93 |||||||||||||||||||| Sbjct: 25518 ctgattcagtcagatgtgat 25537
>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete sequence Length = 174216 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 41737 catgagaggggtcatctgaa 41718
>ref|XM_824275.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.4690) partial mRNA Length = 1794 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gttattgacccattaattat 25 |||||||||||||||||||| Sbjct: 98 gttattgacccattaattat 79
>gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete sequence Length = 122810 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gatattggggtccaaaaaga 110 |||||||||||||||||||| Sbjct: 74164 gatattggggtccaaaaaga 74145
>gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 241211 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcagcaaacccagggactaa 225 |||||||||||||||||||| Sbjct: 47658 tcagcaaacccagggactaa 47639
>gb|AY957386.1| Paracoccus haeundaensis astaxanthin biosynthesis gene cluster, complete sequence Length = 6227 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 tcctcaagtctggtgtgcagaagg 365 |||||||||||||| ||||||||| Sbjct: 5996 tcctcaagtctggtctgcagaagg 6019
>emb|AL954204.1| Pan troglodytes chromosome 22 clone PTB-051G08 map q21.1, complete sequence Length = 146898 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 74800 catgagaggggtcatctgaa 74781
>emb|AL954203.1| Pan troglodytes chromosome 22 clone RP43-019O24 map q21.1, complete sequence Length = 206110 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 141298 catgagaggggtcatctgaa 141279
>dbj|AB206672.1| Paracoccus sp. N81106 carotenoid biosynthesis gene cluster (idi, crtW, crtZ, crtY, crtI, crtB, crtE, crtX), complete cds Length = 10074 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 tcctcaagtctggtgtgcagaagg 365 |||||||||||||| ||||||||| Sbjct: 7350 tcctcaagtctggtctgcagaagg 7373
>gb|AC008660.5| Homo sapiens chromosome 5 clone CTB-27N1, complete sequence Length = 134942 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 aaggcaggcagcaaaatgagccat 385 |||||||||||||||||| ||||| Sbjct: 3304 aaggcaggcagcaaaatgggccat 3281
>gb|AC026695.5| Homo sapiens chromosome 5 clone CTC-284F6, complete sequence Length = 89107 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 aaggcaggcagcaaaatgagccat 385 |||||||||||||||||| ||||| Sbjct: 2051 aaggcaggcagcaaaatgggccat 2074
>gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, complete sequence Length = 178009 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 caaagctggaaatgaacaatttgt 411 ||||||||||||||||||| |||| Sbjct: 49480 caaagctggaaatgaacaaattgt 49457
>gb|AC108476.5| Homo sapiens BAC clone RP11-1413K20 from 2, complete sequence Length = 139342 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 caacagcttggttttgaagg 179 |||||||||||||||||||| Sbjct: 132595 caacagcttggttttgaagg 132576
>dbj|AP000035.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 6/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 3000 catgagaggggtcatctgaa 3019
>ref|XM_226468.3| PREDICTED: Rattus norvegicus hydrocephalus-inducing protein (LOC292017), mRNA Length = 17592 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tctgaaggggatcacacctt 57 |||||||||||||||||||| Sbjct: 17367 tctgaaggggatcacacctt 17386
>gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197401 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcagcaaacccagggactaa 225 |||||||||||||||||||| Sbjct: 48509 tcagcaaacccagggactaa 48528
>gb|BC091376.1| Rattus norvegicus hydrocephalus-inducing protein, mRNA (cDNA clone IMAGE:7320438), partial cds Length = 2252 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tctgaaggggatcacacctt 57 |||||||||||||||||||| Sbjct: 1998 tctgaaggggatcacacctt 2017
>emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in linkage group 18, complete sequence Length = 167352 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 acaaagctggaaatgaacaa 406 |||||||||||||||||||| Sbjct: 59301 acaaagctggaaatgaacaa 59282
>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 171060 catgagaggggtcatctgaa 171041
>gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, complete sequence Length = 220202 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 tatcactggtttctgttatgcagg 284 |||||||||||| ||||||||||| Sbjct: 180219 tatcactggtttgtgttatgcagg 180196
>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence Length = 215189 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 gcttggttttgaaggttctatctg 188 |||||||||| ||||||||||||| Sbjct: 34787 gcttggtttttaaggttctatctg 34764
>dbj|AP000264.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:T1844, complete sequence Length = 60455 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 42013 catgagaggggtcatctgaa 41994
>dbj|AP000177.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 4/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 33899 catgagaggggtcatctgaa 33880
>dbj|AP000101.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 4/20 Length = 100000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catgagaggggtcatctgaa 456 |||||||||||||||||||| Sbjct: 33899 catgagaggggtcatctgaa 33880 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,729,633 Number of Sequences: 3902068 Number of extensions: 4729633 Number of successful extensions: 82738 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82585 Number of HSP's gapped (non-prelim): 151 length of query: 541 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 518 effective length of database: 17,143,297,704 effective search space: 8880228210672 effective search space used: 8880228210672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)