| Clone Name | bags7j05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK063398.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H11, full insert sequence Length = 1730 Score = 295 bits (149), Expect = 7e-77 Identities = 344/409 (84%) Strand = Plus / Plus Query: 17 ctttggagccccagcatcccagcatggcaggtcctttcatggcaggtcatttgggtcctc 76 ||||||||||||||||||| ||||| | | ||||| ||||||| ||| ||| |||| Sbjct: 990 ctttggagccccagcatccaagcataggtgctccttacatggcaactcacctggcacctc 1049 Query: 77 ggccattggctgttgctacaggtgctatcatggaatcgatttacccggatggccagatta 136 |||||| |||||||||||||||||| | |||| | |||||| | ||||||||||| | Sbjct: 1050 agccattagctgttgctacaggtgctgttttggatccaatttactccgatggccagatca 1109 Query: 137 cttcaccaatgctcgatgcacattctgatcctcagacacctgggcgcaagcgtggtgcct 196 |||| |||||||||| || | ||||||||||||||||||||||||||| || ||||| Sbjct: 1110 cttcgccaatgctcggggctctttctgatcctcagacacctgggcgcaaacgctgtgcca 1169 Query: 197 cagatggtatacctgataaggtcgtagaaagaaggcaaaaaagaatgataaaaaacaggg 256 ||| | || | |||||| | |||||||||||||| || || |||||||||||||||| Sbjct: 1170 caggggagattgcagataagctagtagaaagaaggcagaagaggatgataaaaaacaggg 1229 Query: 257 aatcagctgcaaggtccagagcgaggaagcaggcttacactaatgagctcgaaaacaagg 316 |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1230 aatcagctgccaggtcaagagcgaggaagcaggcttacactaatgagcttgaaaacaaag 1289 Query: 317 tgtctcgtctagaagaggagaacgagaggttgaagaagcagaaggagttggagatgatga 376 | |||||||||||||||||| |||||| | |||||||||||||||||||| ||| Sbjct: 1290 ttcttcgtctagaagaggagaatgagaggctaaagaagcagaaggagttggatgagatac 1349 Query: 377 taacctctgcgcctcccccagaacccaagtatcaactccggagaacaag 425 | | ||| ||||||||||| |||||||||||||||||| || ||||||| Sbjct: 1350 tgaactccgcgcctcccccggaacccaagtatcaactcaggcgaacaag 1398 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 atagtaaattttgtagatta 466 |||||||||||||||||||| Sbjct: 1429 atagtaaattttgtagatta 1448
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 176 bits (89), Expect = 4e-41 Identities = 227/273 (83%) Strand = Plus / Plus Query: 17 ctttggagccccagcatcccagcatggcaggtcctttcatggcaggtcatttgggtcctc 76 ||||||||||||||||||| ||||| | | ||||| ||||||| ||| ||| |||| Sbjct: 122471 ctttggagccccagcatccaagcataggtgctccttacatggcaactcacctggcacctc 122530 Query: 77 ggccattggctgttgctacaggtgctatcatggaatcgatttacccggatggccagatta 136 |||||| |||||||||||||||||| | |||| | |||||| | ||||||||||| | Sbjct: 122531 agccattagctgttgctacaggtgctgttttggatccaatttactccgatggccagatca 122590 Query: 137 cttcaccaatgctcgatgcacattctgatcctcagacacctgggcgcaagcgtggtgcct 196 |||| |||||||||| || | ||||||||||||||||||||||||||| || ||||| Sbjct: 122591 cttcgccaatgctcggggctctttctgatcctcagacacctgggcgcaaacgctgtgcca 122650 Query: 197 cagatggtatacctgataaggtcgtagaaagaaggcaaaaaagaatgataaaaaacaggg 256 ||| | || | |||||| | |||||||||||||| || || |||||||||||||||| Sbjct: 122651 caggggagattgcagataagctagtagaaagaaggcagaagaggatgataaaaaacaggg 122710 Query: 257 aatcagctgcaaggtccagagcgaggaagcagg 289 |||||||||| ||||| |||||||||||||||| Sbjct: 122711 aatcagctgccaggtcaagagcgaggaagcagg 122743 Score = 89.7 bits (45), Expect = 8e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 285 gcaggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagaggagaacgagag 344 ||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 123037 gcaggcttacactaatgagcttgaaaacaaagttcttcgtctagaagaggagaatgagag 123096 Query: 345 gttgaagaagcagaagg 361 | | ||||||||||||| Sbjct: 123097 gctaaagaagcagaagg 123113 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 385 gcgcctcccccagaacccaagtatcaactccggagaacaag 425 ||||||||||| |||||||||||||||||| || ||||||| Sbjct: 124211 gcgcctcccccggaacccaagtatcaactcaggcgaacaag 124251 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 atagtaaattttgtagatta 466 |||||||||||||||||||| Sbjct: 124282 atagtaaattttgtagatta 124301
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 176 bits (89), Expect = 4e-41 Identities = 227/273 (83%) Strand = Plus / Plus Query: 17 ctttggagccccagcatcccagcatggcaggtcctttcatggcaggtcatttgggtcctc 76 ||||||||||||||||||| ||||| | | ||||| ||||||| ||| ||| |||| Sbjct: 23918636 ctttggagccccagcatccaagcataggtgctccttacatggcaactcacctggcacctc 23918695 Query: 77 ggccattggctgttgctacaggtgctatcatggaatcgatttacccggatggccagatta 136 |||||| |||||||||||||||||| | |||| | |||||| | ||||||||||| | Sbjct: 23918696 agccattagctgttgctacaggtgctgttttggatccaatttactccgatggccagatca 23918755 Query: 137 cttcaccaatgctcgatgcacattctgatcctcagacacctgggcgcaagcgtggtgcct 196 |||| |||||||||| || | ||||||||||||||||||||||||||| || ||||| Sbjct: 23918756 cttcgccaatgctcggggctctttctgatcctcagacacctgggcgcaaacgctgtgcca 23918815 Query: 197 cagatggtatacctgataaggtcgtagaaagaaggcaaaaaagaatgataaaaaacaggg 256 ||| | || | |||||| | |||||||||||||| || || |||||||||||||||| Sbjct: 23918816 caggggagattgcagataagctagtagaaagaaggcagaagaggatgataaaaaacaggg 23918875 Query: 257 aatcagctgcaaggtccagagcgaggaagcagg 289 |||||||||| ||||| |||||||||||||||| Sbjct: 23918876 aatcagctgccaggtcaagagcgaggaagcagg 23918908 Score = 89.7 bits (45), Expect = 8e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 285 gcaggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagaggagaacgagag 344 ||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 23919202 gcaggcttacactaatgagcttgaaaacaaagttcttcgtctagaagaggagaatgagag 23919261 Query: 345 gttgaagaagcagaagg 361 | | ||||||||||||| Sbjct: 23919262 gctaaagaagcagaagg 23919278 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 385 gcgcctcccccagaacccaagtatcaactccggagaacaag 425 ||||||||||| |||||||||||||||||| || ||||||| Sbjct: 23920376 gcgcctcccccggaacccaagtatcaactcaggcgaacaag 23920416 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 atagtaaattttgtagatta 466 |||||||||||||||||||| Sbjct: 23920447 atagtaaattttgtagatta 23920466
>ref|NM_191061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 933 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcgaggaag 285 |||||||| || || ||||| || |||||||| |||||||| | || ||||| |||||| Sbjct: 793 agaaggcagaagaggatgatcaagaacagggagtcagctgcccgttcaagagccaggaag 852 Query: 286 caggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagaggagaacgagagg 345 ||||| ||||||||||| || ||||||||||| |||||| ||||||||||||| | |||| Sbjct: 853 caggcctacactaatgaacttgaaaacaaggtttctcgtttagaagaggagaatgtgagg 912 Query: 346 ttgaagaagcagaaggagt 364 | |||| ||| ||||||| Sbjct: 913 ctaaagaggcaaaaggagt 931
>ref|NM_179446.2| Arabidopsis thaliana ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2) AT1G45249 (ABF2) transcript variant AT1G45249.1 mRNA, complete cds Length = 1662 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| |||||||||| ||||||||||| ||| | |||||||||||||||||| | || Sbjct: 1125 gtagagagaaggcaaaggagaatgataaagaaccgagaatcagctgcaaggtcccgggcc 1184 Query: 280 aggaagcaggcttacac 296 ||||| ||||||||||| Sbjct: 1185 aggaaacaggcttacac 1201
>gb|AF093545.1|AF093545 Arabidopsis thaliana clone 2 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds Length = 1654 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| |||||||||| ||||||||||| ||| | |||||||||||||||||| | || Sbjct: 1111 gtagagagaaggcaaaggagaatgataaagaaccgagaatcagctgcaaggtcccgggcc 1170 Query: 280 aggaagcaggcttacac 296 ||||| ||||||||||| Sbjct: 1171 aggaaacaggcttacac 1187
>dbj|AB017160.1| Arabidopsis thaliana mRNA for ABA-responsive element binding protein 1 (AREB1), complete cds Length = 1541 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| |||||||||| ||||||||||| ||| | |||||||||||||||||| | || Sbjct: 1109 gtagagagaaggcaaaggagaatgataaagaaccgagaatcagctgcaaggtcccgggcc 1168 Query: 280 aggaagcaggcttacac 296 ||||| ||||||||||| Sbjct: 1169 aggaaacaggcttacac 1185
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 286 caggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagaggagaa 338 ||||| ||||||||||| || ||||||||||| |||||| ||||||||||||| Sbjct: 57819 caggcctacactaatgaacttgaaaacaaggtttctcgtttagaagaggagaa 57767 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 394 ccagaacccaagtatcaactccggagaacaag 425 ||||||||||||||||||||| |||||||||| Sbjct: 56326 ccagaacccaagtatcaactcaggagaacaag 56295
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 286 caggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagaggagaa 338 ||||| ||||||||||| || ||||||||||| |||||| ||||||||||||| Sbjct: 34560525 caggcctacactaatgaacttgaaaacaaggtttctcgtttagaagaggagaa 34560473 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 394 ccagaacccaagtatcaactccggagaacaag 425 ||||||||||||||||||||| |||||||||| Sbjct: 34559032 ccagaacccaagtatcaactcaggagaacaag 34559001
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 286 caggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagaggagaa 338 ||||| ||||||||||| || ||||||||||| |||||| ||||||||||||| Sbjct: 12542 caggcctacactaatgaacttgaaaacaaggtttctcgtttagaagaggagaa 12490 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 394 ccagaacccaagtatcaactccggagaacaag 425 ||||||||||||||||||||| |||||||||| Sbjct: 11049 ccagaacccaagtatcaactcaggagaacaag 11018
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 286 caggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagaggagaa 338 ||||| ||||||||||| || ||||||||||| |||||| ||||||||||||| Sbjct: 136244 caggcctacactaatgaacttgaaaacaaggtttctcgtttagaagaggagaa 136192 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 394 ccagaacccaagtatcaactccggagaacaag 425 ||||||||||||||||||||| |||||||||| Sbjct: 134751 ccagaacccaagtatcaactcaggagaacaag 134720
>ref|NM_179159.2| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.1 mRNA, complete cds Length = 1425 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1195 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1238
>ref|NM_119562.3| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.2 mRNA, complete cds Length = 1724 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1195 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1238
>ref|NM_001036709.1| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.4 mRNA, complete cds Length = 2086 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1207 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1250
>ref|NM_001036708.1| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.3 mRNA, complete cds Length = 1700 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1207 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1250
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 130836 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 130879
>emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17I5 (ESSA project) Length = 86748 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 81812 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 81855
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project) Length = 94091 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 788 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 831
>gb|AY081467.1| Arabidopsis thaliana unknown protein (F17I5.190:F17I5.200) mRNA, complete cds Length = 1398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1120 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1163
>gb|AY054605.1| Arabidopsis thaliana Unknown protein (F17I5.190:F17I5.200) mRNA, complete cds Length = 1697 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1193 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1236
>gb|AF334210.1|AF334210 Arabidopsis thaliana bZIP protein DPBF5 mRNA, complete cds Length = 1350 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1120 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1163
>emb|BX842336.1|CNS0A37Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZG02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1606 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1168 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1211
>emb|BX842320.1|CNS0A2RO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 607 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 102 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 145
>dbj|AK175851.1| Arabidopsis thaliana mRNA for abscisic acid responsive elements-binding factor (ABRE/ABF3), complete cds, clone: RAFL22-47-B14 Length = 1724 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1208 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1251
>gb|AF093546.1|AF093546 Arabidopsis thaliana clone 11 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds Length = 1667 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 226 agaaggcaaaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1157 agaaggcaaaaaaggatgataaagaatagggaatcagctgcaag 1200
>ref|NM_202252.2| Arabidopsis thaliana ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2); transcription factor AT1G45249 (ABF2) transcript variant AT1G45249.2 mRNA, complete cds Length = 1400 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtcc 273 ||||| |||||||||| ||||||||||| ||| | |||||||||||||||||| Sbjct: 1125 gtagagagaaggcaaaggagaatgataaagaaccgagaatcagctgcaaggtcc 1178
>gb|AY786307.1| Malus x domestica bZIP transcription factor (ZIP1) mRNA, complete cds Length = 1164 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 227 gaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcgaggaagc 286 |||||||||| ||||||||||| ||| ||||||| |||||| | || |||| ||||||| Sbjct: 794 gaaggcaaaagagaatgataaagaaccgggaatctgctgcacgttcgcgagcaaggaagc 853 Query: 287 aggcttacactaatgagctcgaaaacaaggtgtctcgtctagaagagga 335 |||| || || ||||| || || ||||| || || ||||| || ||||| Sbjct: 854 aggcatatacaaatgaactggagaacaaagtttcacgtctggaggagga 902
>ref|NM_115544.2| Arabidopsis thaliana AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3); DNA binding / transcription factor/ transcriptional activator AT3G56850 (AREB3) mRNA, complete cds Length = 1729 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| || ||||| || ||||||||||| ||||| || || ||||| | ||| |||| Sbjct: 1295 gtagagaggaggcagaagagaatgataaagaacagagagtctgctgctcgttcccgagct 1354 Query: 280 aggaagcaggcttacactaatgagct 305 ||||| |||||||||||| ||||||| Sbjct: 1355 aggaaacaggcttacactcatgagct 1380
>ref|XM_370021.1| Magnaporthe grisea 70-15 hypothetical protein (MG06536.4) partial mRNA Length = 2145 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 330 agaggagaacgagaggttgaagaagcagaaggag 363 ||||||||| ||||||||||||||| |||||||| Sbjct: 1041 agaggagaaggagaggttgaagaaggagaaggag 1074
>gb|AY081670.1| Arabidopsis thaliana promoter-binding factor-like protein (At3g56850) mRNA, complete cds Length = 943 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| || ||||| || ||||||||||| ||||| || || ||||| | ||| |||| Sbjct: 673 gtagagaggaggcagaagagaatgataaagaacagagagtctgctgctcgttcccgagct 732 Query: 280 aggaagcaggcttacactaatgagct 305 ||||| |||||||||||| ||||||| Sbjct: 733 aggaaacaggcttacactcatgagct 758
>gb|AY062448.1| Arabidopsis thaliana promoter-binding factor-like protein (At3g56850; T8M16_180) mRNA, complete cds Length = 1672 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| || ||||| || ||||||||||| ||||| || || ||||| | ||| |||| Sbjct: 1238 gtagagaggaggcagaagagaatgataaagaacagagagtctgctgctcgttcccgagct 1297 Query: 280 aggaagcaggcttacactaatgagct 305 ||||| |||||||||||| ||||||| Sbjct: 1298 aggaaacaggcttacactcatgagct 1323
>gb|AF334208.1|AF334208 Arabidopsis thaliana bZIP protein DPBF3 mRNA, complete cds Length = 894 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| || ||||| || ||||||||||| ||||| || || ||||| | ||| |||| Sbjct: 673 gtagagaggaggcagaagagaatgataaagaacagagagtctgctgctcgttcccgagct 732 Query: 280 aggaagcaggcttacactaatgagct 305 ||||| |||||||||||| ||||||| Sbjct: 733 aggaaacaggcttacactcatgagct 758
>emb|BX823913.1|CNS0A6N1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1715 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| || ||||| || ||||||||||| ||||| || || ||||| | ||| |||| Sbjct: 1280 gtagagaggaggcagaagagaatgataaagaacagagagtctgctgctcgttcccgagct 1339 Query: 280 aggaagcaggcttacactaatgagct 305 ||||| |||||||||||| ||||||| Sbjct: 1340 aggaaacaggcttacactcatgagct 1365
>emb|BX823715.1|CNS0A6KH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZB06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1603 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| || ||||| || ||||||||||| ||||| || || ||||| | ||| |||| Sbjct: 1187 gtagagaggaggcagaagagaatgataaagaacagagagtctgctgctcgttcccgagct 1246 Query: 280 aggaagcaggcttacactaatgagct 305 ||||| |||||||||||| ||||||| Sbjct: 1247 aggaaacaggcttacactcatgagct 1272
>dbj|AB017162.1| Arabidopsis thaliana mRNA for ABA-responsive element binding protein 3 (AREB3), complete cds Length = 1635 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 220 gtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgcaaggtccagagcg 279 ||||| || ||||| || ||||||||||| ||||| || || ||||| | ||| |||| Sbjct: 1232 gtagagaggaggcagaagagaatgataaagaacagagagtctgctgctcgttcccgagct 1291 Query: 280 aggaagcaggcttacactaatgagct 305 ||||| |||||||||||| ||||||| Sbjct: 1292 aggaaacaggcttacactcatgagct 1317
>emb|BX842338.1|CNS0A3AL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1681 Score = 50.1 bits (25), Expect = 0.007 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 226 agaaggca-aaaaagaatgataaaaaacagggaatcagctgcaag 269 |||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 1158 agaaggcacaaaaaggatgataaagaatagggaatcagctgcaag 1202
>gb|AF329450.1| Catharanthus roseus transcription factor BZIP1 (bzip1) mRNA, complete cds Length = 1665 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 238 agaatgataaaaaacagggaatcagctgcaaggtccagagcgaggaagcaggcttacact 297 |||||||| |||||||| ||||| |||||| | || |||| ||||||||||| |||||| Sbjct: 1169 agaatgattaaaaacagagaatctgctgcacgatcacgagccaggaagcaggcctacact 1228
>gb|AY789639.1| Capsicum annuum bZIP protein mRNA, complete cds Length = 868 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 234 aaaaagaatgataaaaaacagggaatcagc 263 ||||||||||||| ||||||||||||||| Sbjct: 333 aaaaagaatgatatcaaacagggaatcagc 362
>gb|AE006650.1| Sulfolobus solfataricus P2 section 9 of 272 of the complete genome Length = 11720 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 aggcaaaaaagaatgataaaaa 250 |||||||||||||||||||||| Sbjct: 5310 aggcaaaaaagaatgataaaaa 5331
>gb|AC146910.16| Medicago truncatula clone mth2-59i21, complete sequence Length = 109724 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 229 aggcaaaaaagaatgataaaaaacagggaatcagctgc 266 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 72774 aggcaaaagaggatgataaaaaatagggaatctgctgc 72811
>emb|Y08257.1|SS56KBFR S.solfataricus 56 kbp DNA fragment Length = 56105 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 aggcaaaaaagaatgataaaaa 250 |||||||||||||||||||||| Sbjct: 11206 aggcaaaaaagaatgataaaaa 11185
>gb|AC157544.7| Mus musculus chromosome 8, clone RP23-271P20, complete sequence Length = 159843 Score = 44.1 bits (22), Expect = 0.42 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 328 gaagaggagaacga-gaggttgaagaagcagaag 360 ||||||||||| || ||||||||||||||||||| Sbjct: 66502 gaagaggagaaggaagaggttgaagaagcagaag 66535
>gb|AF430372.1| Capsicum chinense bZIP transcription factor (PPI1) mRNA, complete cds Length = 1216 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 234 aaaaagaatgataaaaaacagggaatcagc 263 ||||||||||||| ||||||||||||||| Sbjct: 663 aaaaagaatgatatcaaacagggaatcagc 692
>gb|AF127797.1|AF127797 Capsicum chinense putative bZIP DNA-binding protein mRNA, complete cds Length = 1211 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 234 aaaaagaatgataaaaaacagggaatcagc 263 ||||||||||||| ||||||||||||||| Sbjct: 682 aaaaagaatgatatcaaacagggaatcagc 711
>gb|BC106514.1| Xenopus laevis cDNA clone IMAGE:7393825, partial cds Length = 1142 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 agaaagaaggcaaaaaagaat 242 ||||||||||||||||||||| Sbjct: 458 agaaagaaggcaaaaaagaat 478
>gb|AY731647.1| Arachis hypogaea clone PM505 microsatellite sequence Length = 300 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 ggagaacgagaggttgaagaa 353 ||||||||||||||||||||| Sbjct: 299 ggagaacgagaggttgaagaa 279
>gb|AC115865.9| Mus musculus chromosome 3, clone RP24-314I8, complete sequence Length = 200362 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 161210 aagaagcagaaggagttcgagctgatgat 161182
>gb|AC145900.3| Pan troglodytes BAC clone RP43-40I9 from 7, complete sequence Length = 160229 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aaaaaagaatgataaaaaaca 253 ||||||||||||||||||||| Sbjct: 15545 aaaaaagaatgataaaaaaca 15565
>gb|AY530758.1| Lycopersicon esculentum AREB-like protein mRNA, complete cds Length = 1344 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 aaggtcgtagaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgc 266 |||||||| ||||| ||||| | |||||||||||||| || || |||||||| Sbjct: 1093 aaggtcgttgaaaggaggcagaggagaatgataaaaaatagagagtcagctgc 1145
>ref|XM_987479.1| PREDICTED: Mus musculus guanylate nucleotide binding protein 2 (Gbp2), mRNA Length = 2311 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1542 aagaagcagaaggagttcgagctgatgat 1570
>gb|BC049141.1| Mus musculus guanylate nucleotide binding protein 2, mRNA (cDNA clone IMAGE:3992217), containing frame-shift errors Length = 2493 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1663 aagaagcagaaggagttcgagctgatgat 1691
>emb|CT010249.1| Mus musculus full open reading frame cDNA clone RZPDo836D0851D for gene Gbp2, Guanylate nucleotide binding protein 2; complete cds, incl. stopcodon Length = 1770 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1516 aagaagcagaaggagttcgagctgatgat 1544
>gb|BC032882.1| Mus musculus guanylate nucleotide binding protein 2, mRNA (cDNA clone MGC:41173 IMAGE:1230883), complete cds Length = 2500 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1701 aagaagcagaaggagttcgagctgatgat 1729
>gb|BC011336.1| Mus musculus guanylate nucleotide binding protein 2, mRNA (cDNA clone MGC:18544 IMAGE:3494311), complete cds Length = 2490 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1675 aagaagcagaaggagttcgagctgatgat 1703
>emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on chromosome Xq25 Contains the 3' end of the HS6ST2 gene for heparan sulfate 6-O-sulfotransferase 2, a novel gene and the 3' end of a novel gene, complete sequence Length = 184975 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 452 aaattttgtagattacactgc 472 ||||||||||||||||||||| Sbjct: 44678 aaattttgtagattacactgc 44698
>emb|AJ007970.1|MMU7970 Mus musculus mRNA for mGBP-2 protein Length = 2464 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1679 aagaagcagaaggagttcgagctgatgat 1707
>gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119730 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 aaaaagaatgataaaaaacag 254 ||||||||||||||||||||| Sbjct: 61648 aaaaagaatgataaaaaacag 61668
>gb|AF109168.1| Mus musculus guanylate binding protein 2 (Gbp2) mRNA, complete cds Length = 2421 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1639 aagaagcagaaggagttcgagctgatgat 1667
>dbj|AK150146.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530137D16 product:guanylate nucleotide binding protein 2, full insert sequence Length = 1131 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 988 aagaagcagaaggagttcgagctgatgat 1016
>ref|XM_395889.2| PREDICTED: Apis mellifera similar to ENSANGP00000026313 (LOC412432), partial mRNA Length = 1504 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 236 aaagaatgataaaaaacagggaatcagct 264 |||||||||||||||| || ||||||||| Sbjct: 365 aaagaatgataaaaaatagagaatcagct 393
>gb|AC005046.3|AC005046 Homo sapiens BAC clone CTB-13F3 from 7q22, complete sequence Length = 219436 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aaaaaagaatgataaaaaaca 253 ||||||||||||||||||||| Sbjct: 120336 aaaaaagaatgataaaaaaca 120356
>gb|AF077007.1|AF077007 Mus musculus interferon-induced guanylate binding protein GBP-2 (Gbp2) mRNA, complete cds Length = 2471 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1686 aagaagcagaaggagttcgagctgatgat 1714
>ref|NM_010260.1| Mus musculus guanylate nucleotide binding protein 2 (Gbp2), mRNA Length = 2471 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 1686 aagaagcagaaggagttcgagctgatgat 1714
>gb|AC102108.12| Mus musculus chromosome 3, clone RP23-100J23, complete sequence Length = 216506 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 aagaagcagaaggagttggagatgatgat 377 ||||||||||||||||| ||| ||||||| Sbjct: 24013 aagaagcagaaggagttcgagctgatgat 23985
>ref|NM_118549.1| Arabidopsis thaliana ATP binding / microtubule motor AT4G24170 mRNA, complete cds Length = 3015 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 agaggttgaagaagcagaag 360 |||||||||||||||||||| Sbjct: 1104 agaggttgaagaagcagaag 1085
>ref|XM_658606.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6094.2), mRNA Length = 852 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ttctgcacccgtttgaggtcgata 449 ||||||||||||||||| |||||| Sbjct: 182 ttctgcacccgtttgagatcgata 205
>gb|AC102622.7| Mus musculus chromosome 3, clone RP23-434O10, complete sequence Length = 237899 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 agaaagaaggcaaaaaagaa 241 |||||||||||||||||||| Sbjct: 135857 agaaagaaggcaaaaaagaa 135838
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gaagcagaaggagttggaga 370 |||||||||||||||||||| Sbjct: 169985 gaagcagaaggagttggaga 170004
>ref|XM_720623.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05280) partial mRNA Length = 2358 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaaaagaatgataaaaaaca 253 |||||||||||||||||||| Sbjct: 958 aaaaagaatgataaaaaaca 977
>ref|XM_664041.1| Plasmodium berghei strain ANKA hypothetical protein (PB000948.01.0) partial mRNA Length = 378 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaaaagaatgataaaaaaca 253 |||||||||||||||||||| Sbjct: 88 aaaaagaatgataaaaaaca 107
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence Length = 139778 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaaaagaatgataaaaaaca 253 |||||||||||||||||||| Sbjct: 70091 aaaaagaatgataaaaaaca 70072
>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the SOX21 gene for SRY (sex determining region Y)-box 21, a bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and 2 CpG islands, complete sequence Length = 180538 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 caaaaaagaatgataaaaaa 251 |||||||||||||||||||| Sbjct: 48249 caaaaaagaatgataaaaaa 48230
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 agaggttgaagaagcagaag 360 |||||||||||||||||||| Sbjct: 69307 agaggttgaagaagcagaag 69288
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 agaggttgaagaagcagaag 360 |||||||||||||||||||| Sbjct: 12602 agaggttgaagaagcagaag 12583
>emb|CR848002.10| Zebrafish DNA sequence from clone CH211-133L14 in linkage group 17, complete sequence Length = 57807 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 attttgtagattacactgct 473 |||||||||||||||||||| Sbjct: 21053 attttgtagattacactgct 21072
>emb|BX572644.6| Mouse DNA sequence from clone RP24-33B9 on chromosome 11, complete sequence Length = 30606 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ggttgaagaagcagaaggag 363 |||||||||||||||||||| Sbjct: 20697 ggttgaagaagcagaaggag 20678
>emb|AL772227.5| Mouse DNA sequence from clone RP23-1O16 on chromosome 11 Contains two novel genes, the 5' end of the gene for a novel protein similar to human Class V ATPase type 10B (ATP10B) (9030605H24Rik) and the 3' end of a novel gene, complete sequence Length = 178001 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 350 agaagcagaaggagttggagatgatgat 377 |||||||| |||||||||||||| |||| Sbjct: 133399 agaagcaggaggagttggagatgctgat 133426
>emb|AL646042.14| Mouse DNA sequence from clone RP23-70A15 on chromosome 11 Contains the 5' end of the Ulk2 gene for Unc-51 like kinase 2 (C. elegans), two novel genes (A530017D24Rik, D630015H07), the Akap10 gene for A kinase (PRKA) anchor protein 10, the 5' end of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik) and three CpG islands, complete sequence Length = 159693 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 gttgaagaagcagaaggagttgga 368 |||||||||| ||||||||||||| Sbjct: 134424 gttgaagaaggagaaggagttgga 134447
>gb|AY119016.1| Drosophila melanogaster LP04564 full insert cDNA Length = 2477 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 aaattttgtagattacactg 471 |||||||||||||||||||| Sbjct: 2071 aaattttgtagattacactg 2052
>ref|NM_164511.1| Drosophila melanogaster CG31694-RA (CG31694), mRNA Length = 2668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 aaattttgtagattacactg 471 |||||||||||||||||||| Sbjct: 2310 aaattttgtagattacactg 2291
>gb|AC009392.6| Drosophila melanogaster, chromosome 2L, region 23A-23E, BAC clone BACR42J13, complete sequence Length = 179125 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 aaattttgtagattacactg 471 |||||||||||||||||||| Sbjct: 144826 aaattttgtagattacactg 144845
>gb|DQ073639.1| Nicotiana tabacum bZIP mRNA, complete cds Length = 1529 Score = 40.1 bits (20), Expect = 6.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 238 agaatgataaaaaacagggaatcagctgcaaggtccagagcgaggaagcaggcttacact 297 |||||||| || ||||| ||||| || ||||| || || || ||||||||||||||||| Sbjct: 1075 agaatgattaagaacagagaatccgcagcaagatcaagggctcggaagcaggcttacact 1134
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 agcagaaggagttggagatg 372 |||||||||||||||||||| Sbjct: 5529921 agcagaaggagttggagatg 5529940
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cagacacctgggcgcaagcg 188 |||||||||||||||||||| Sbjct: 16752811 cagacacctgggcgcaagcg 16752830
>gb|AC074030.17|AC074030 Homo sapiens 12 BAC RP11-425I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163700 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aaaaaagaatgataaaaaac 252 |||||||||||||||||||| Sbjct: 47104 aaaaaagaatgataaaaaac 47123
>gb|AC013471.7| Homo sapiens BAC clone RP11-489A14 from 2, complete sequence Length = 145040 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 gaggcagcagcaaactttgg 22 |||||||||||||||||||| Sbjct: 61867 gaggcagcagcaaactttgg 61848
>gb|AC016144.13|AC016144 Homo sapiens 12 BAC RP11-367O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178453 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aaaaaagaatgataaaaaac 252 |||||||||||||||||||| Sbjct: 15615 aaaaaagaatgataaaaaac 15596
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 agcagaaggagttggagatg 372 |||||||||||||||||||| Sbjct: 68218 agcagaaggagttggagatg 68199
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cagacacctgggcgcaagcg 188 |||||||||||||||||||| Sbjct: 129866 cagacacctgggcgcaagcg 129885
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cagacacctgggcgcaagcg 188 |||||||||||||||||||| Sbjct: 1053 cagacacctgggcgcaagcg 1072
>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones DS02190 and DS00906, complete sequence Length = 163403 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 aaattttgtagattacactg 471 |||||||||||||||||||| Sbjct: 161469 aaattttgtagattacactg 161450
>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete sequence Length = 314957 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 aaattttgtagattacactg 471 |||||||||||||||||||| Sbjct: 39229 aaattttgtagattacactg 39248
>gb|AF001454.1|AF001454 Helianthus annuus Dc3 promoter-binding factor-2 (DPBF-2) mRNA, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 223 gaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgc 266 |||||||||||||| |||||||||| || ||||| || ||||| Sbjct: 549 gaaagaaggcaaaagcgaatgataaagaatagggagtctgctgc 592
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 agcagaaggagttggagatg 372 |||||||||||||||||||| Sbjct: 5529910 agcagaaggagttggagatg 5529929
>gb|AC005255.1|AC005255 Homo sapiens chromosome 19, CIT-HSP-146e8, complete sequence Length = 94343 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 agaaagaaggcaaaaaagaa 241 |||||||||||||||||||| Sbjct: 57710 agaaagaaggcaaaaaagaa 57729
>gb|AF061870.1|AF061870 Helianthus annuus Dc3 promoter-binding factor-3 mRNA, partial cds Length = 913 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 223 gaaagaaggcaaaaaagaatgataaaaaacagggaatcagctgc 266 ||||| |||||||| ||||||||||| || || ||||| ||||| Sbjct: 523 gaaaggaggcaaaagagaatgataaagaatagagaatcggctgc 566
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 agcagaaggagttggagatg 372 |||||||||||||||||||| Sbjct: 82726 agcagaaggagttggagatg 82745
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 agcagaaggagttggagatg 372 |||||||||||||||||||| Sbjct: 122964 agcagaaggagttggagatg 122945
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 agaatgataaaaaacaggga 257 |||||||||||||||||||| Sbjct: 592300 agaatgataaaaaacaggga 592281
>emb|AL683824.8| Mouse DNA sequence from clone RP23-90O18 on chromosome 3, complete sequence Length = 233589 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 agaaagaaggcaaaaaagaa 241 |||||||||||||||||||| Sbjct: 143580 agaaagaaggcaaaaaagaa 143599
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 agaggttgaagaagcagaag 360 |||||||||||||||||||| Sbjct: 8261 agaggttgaagaagcagaag 8280 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,398,171 Number of Sequences: 3902068 Number of extensions: 4398171 Number of successful extensions: 94933 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94633 Number of HSP's gapped (non-prelim): 294 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)