ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags7j04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009444.1| Triticum aestivum clone wlmk8.pk0004.f6:fis, full insert mRNA sequence Length = 1858 Score = 327 bits (165), Expect = 2e-86 Identities = 225/245 (91%) Strand = Plus / Plus Query: 9 gtgaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtg 68 ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||| Sbjct: 1298 gtgaagcaggtgagcgtggtgtgggacgcgtacgaggccgccaagggcgcccacggcgtg 1357 Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||||| ||||||||| ||||||||||| |||| |||||||||||||||||| ||||| Sbjct: 1358 tgcatcctcaccgagtgggacgagttcaagaagctcgactaccagaagatcttcgacaac 1417 Query: 129 atgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagg 188 ||||||||||| |||||||| || ||||| |||||||||||| ||||||| ||||||||| Sbjct: 1418 atgcagaagcccgccttcgtgtttgacggccgcaacgtcgtcgacgccgagaagctcagg 1477 Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 1478 gagatcggcttcatcgtctactccatcggcaagccgctcgacggctggctcaaggacatg 1537 Query: 249 cccgc 253 ||||| Sbjct: 1538 cccgc 1542
>gb|BT016824.1| Zea mays clone Contig657 mRNA sequence Length = 1951 Score = 305 bits (154), Expect = 8e-80 Identities = 229/254 (90%) Strand = Plus / Plus Query: 9 gtgaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtg 68 ||||||||||||||| ||||||||||||||||||||||||||||| ||||| | || Sbjct: 1358 gtgaagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacgggctg 1417 Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1418 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 1477 Query: 129 atgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagg 188 ||||||||||| ||||||||||||||||| |||||| ||||| || |||| ||||| ||| Sbjct: 1478 atgcagaagcccgccttcgtcttcgacggccgcaacatcgtcgactccgagaagctgagg 1537 Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| |||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1538 gagatcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatg 1597 Query: 249 cccgcgatcgccta 262 |||||| ||||||| Sbjct: 1598 cccgcggtcgccta 1611
>ref|XM_469834.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2058 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 |||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||| Sbjct: 1399 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgc 1458 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||| |||||||||||||||| | |||||||| Sbjct: 1459 atcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatg 1518 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||||||||| |||||||||||||| |||||||||||| || | || |||||||||||| Sbjct: 1519 cagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggag 1578 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1579 atcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgccc 1638 Query: 252 gc 253 || Sbjct: 1639 gc 1640
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 |||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||| Sbjct: 31013805 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgc 31013864 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||| |||||||||||||||| | |||||||| Sbjct: 31013865 atcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatg 31013924 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||||||||| |||||||||||||| |||||||||||| || | || |||||||||||| Sbjct: 31013925 cagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggag 31013984 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 31013985 atcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgccc 31014044 Query: 252 gc 253 || Sbjct: 31014045 gc 31014046 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 129 atgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagg 188 |||||||||||||| ||||| ||||||||||||||||| || |||| || ||||| ||| Sbjct: 17588361 atgcagaagccggcgttcgtgttcgacgggcgcaacgtggttgacgctgagaagctgagg 17588420 Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 |||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 17588421 gagattggattcatcgtctactccattggcaagcctctcgatgcctggctcaaggacatg 17588480 Query: 249 cc 250 || Sbjct: 17588481 cc 17588482 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 63 gccgtgtgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttc 122 ||||| |||||||| ||||||||| |||||||| ||| ||||||||| ||| | | Sbjct: 22449698 gccgtctgcatcctcaccgagtgggacgagttccgccggctcgactaccagcggatgtac 22449639 Query: 123 aacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaag 182 || |||||| |||||||||||| |||||||||| |||||||||||| || | |||||| Sbjct: 22449638 gacgccatgcacaagccggccttcctcttcgacggccgcaacgtcgtcgacccggacaag 22449579 Query: 183 ctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaag 242 ||| | || |||||| | |||||||||||||||||||||||||| ||||||| | Sbjct: 22449578 ctccgccgcatcggcttcgtcgtctactccatcggcaagccgctcgaccactggctcagg 22449519 Query: 243 gacatgcccgc 253 ||||||||||| Sbjct: 22449518 gacatgcccgc 22449508
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Minus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 |||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||| Sbjct: 82259 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgc 82200 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||| |||||||||||||||| | |||||||| Sbjct: 82199 atcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatg 82140 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||||||||| |||||||||||||| |||||||||||| || | || |||||||||||| Sbjct: 82139 cagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggag 82080 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 82079 atcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgccc 82020 Query: 252 gc 253 || Sbjct: 82019 gc 82018
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 |||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||| Sbjct: 31104328 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgc 31104387 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||| |||||||||||||||| | |||||||| Sbjct: 31104388 atcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatg 31104447 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||||||||| |||||||||||||| |||||||||||| || | || |||||||||||| Sbjct: 31104448 cagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggag 31104507 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 31104508 atcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgccc 31104567 Query: 252 gc 253 || Sbjct: 31104568 gc 31104569 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 129 atgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagg 188 |||||||||||||| ||||| ||||||||||||||||| || |||| || ||||| ||| Sbjct: 17581902 atgcagaagccggcgttcgtgttcgacgggcgcaacgtggttgacgctgagaagctgagg 17581961 Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 |||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 17581962 gagattggattcatcgtctactccattggcaagcctctcgatgcctggctcaaggacatg 17582021 Query: 249 cc 250 || Sbjct: 17582022 cc 17582023 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 63 gccgtgtgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttc 122 ||||| |||||||| ||||||||| |||||||| ||| ||||||||| ||| | | Sbjct: 22442727 gccgtctgcatcctcaccgagtgggacgagttccgccggctcgactaccagcggatgtac 22442668 Query: 123 aacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaag 182 || |||||| |||||||||||| |||||||||| |||||||||||| || | |||||| Sbjct: 22442667 gacgccatgcacaagccggccttcctcttcgacggccgcaacgtcgtcgacccggacaag 22442608 Query: 183 ctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaag 242 ||| | || |||||| | |||||||||||||||||||||||||| ||||||| | Sbjct: 22442607 ctccgccgcatcggcttcgtcgtctactccatcggcaagccgctcgaccactggctcagg 22442548 Query: 243 gacatgcccgc 253 ||||||||||| Sbjct: 22442547 gacatgcccgc 22442537
>dbj|AK098880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F12, full insert sequence Length = 1946 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 |||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||| Sbjct: 1304 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagaacgcccatggcctctgc 1363 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||| |||||||||||||||| | |||||||| Sbjct: 1364 atcctcaccgagtgggacgagttcaagacgctcgactaccagaagatctacgacaacatg 1423 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||||||||| |||||||||||||| |||||||||||| || | || |||||||||||| Sbjct: 1424 cagaagccggcgttcgtcttcgacggccgcaacgtcgtcgacccggagaagctcagggag 1483 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1484 atcggcttcatcgtctactccatcggcaagccgctcgacgcctggctcaaggacatgccc 1543 Query: 252 gc 253 || Sbjct: 1544 gc 1545
>gb|BT017136.1| Zea mays clone EL01N0365H08.c mRNA sequence Length = 1682 Score = 285 bits (144), Expect = 7e-74 Identities = 222/248 (89%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 |||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 1105 aagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacggggtgtgc 1164 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 1165 atcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatg 1224 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 |||||||| ||||||||||||||||| |||||| ||||| || | || ||||| |||||| Sbjct: 1225 cagaagcccgccttcgtcttcgacggccgcaacatcgtcgacccggagaagctgagggag 1284 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 || |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 1285 atcggcttcatcgtctactccatcggcaagccgctcgacgcctggcttaaggacatgccc 1344 Query: 252 gcgatcgc 259 ||| |||| Sbjct: 1345 gcggtcgc 1352
>gb|AY103689.1| Zea mays PCO113568 mRNA sequence Length = 1967 Score = 285 bits (144), Expect = 7e-74 Identities = 222/248 (89%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 |||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 1364 aagcaggtgagctgcgtgtgggacgcgtacgaggccaccaagggcgcccacggggtgtgc 1423 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 1424 atcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatg 1483 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 |||||||| ||||||||||||||||| |||||| ||||| || | || ||||| |||||| Sbjct: 1484 cagaagcccgccttcgtcttcgacggccgcaacatcgtcgacccggagaagctgagggag 1543 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 || |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 1544 atcggcttcatcgtctactccatcggcaagccgctcgacgcctggcttaaggacatgccc 1603 Query: 252 gcgatcgc 259 ||| |||| Sbjct: 1604 gcggtcgc 1611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||||||||||||||| || || |||||||||||||||||||||| || ||| Sbjct: 14934187 aagcaggtgagcgtggtgtgggatgcatatgaggccaccaagggggcccatggtgtctgc 14934246 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 14934247 atcctcaccgagtgggacgagttcaagaccttggactaccagaagatctttgacaacatg 14934306 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 |||||||| || |||||||| || |||||||| || ||| | ||||| |||||||||||| Sbjct: 14934307 cagaagcctgcattcgtctttgatgggcgcaatgtggtcgatgccgagaagctcagggag 14934366 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 14934367 attgggttcatcgtctactccatcggcaagccgcttgatgcctggctcaaggacatgccc 14934426 Query: 252 gcg 254 ||| Sbjct: 14934427 gcg 14934429 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||| ||||| Sbjct: 14940063 aagcaggtgagtgtggtctgggatgcgtatgaggccaccaagggagcccatggactgtgc 14940122 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| || |||||| ||||||||||| |||||||||||| |||||| |||||||| Sbjct: 14940123 atcctcactgagtgggacgagttcaagaccttggactaccagaggatctttgacaacatg 14940182 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||| || || || |||||||| |||||||| || ||| | | || |||||||||||| Sbjct: 14940183 cagaaacctgcatttgtcttcgatgggcgcaatgtggtcgatcctgagaagctcagggag 14940242 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 |||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 14940243 attggcttcattgtctactctatcggcaagccgcttgatgcatggctcaaagacatgccc 14940302 Query: 252 gcg 254 ||| Sbjct: 14940303 gcg 14940305
>dbj|AK104003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H11, full insert sequence Length = 1852 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||||||||||||||| || || |||||||||||||||||||||| || ||| Sbjct: 1312 aagcaggtgagcgtggtgtgggatgcatatgaggccaccaagggggcccatggtgtctgc 1371 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1372 atcctcaccgagtgggacgagttcaagaccttggactaccagaagatctttgacaacatg 1431 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 |||||||| || |||||||| || |||||||| || ||| | ||||| |||||||||||| Sbjct: 1432 cagaagcctgcattcgtctttgatgggcgcaatgtggtcgatgccgagaagctcagggag 1491 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1492 attgggttcatcgtctactccatcggcaagccgcttgatgcctggctcaaggacatgccc 1551 Query: 252 gcg 254 ||| Sbjct: 1552 gcg 1554
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||||||||||||||| || || |||||||||||||||||||||| || ||| Sbjct: 14888470 aagcaggtgagcgtggtgtgggatgcatatgaggccaccaagggggcccatggtgtctgc 14888529 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 14888530 atcctcaccgagtgggacgagttcaagaccttggactaccagaagatctttgacaacatg 14888589 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 |||||||| || |||||||| || |||||||| || ||| | ||||| |||||||||||| Sbjct: 14888590 cagaagcctgcattcgtctttgatgggcgcaatgtggtcgatgccgagaagctcagggag 14888649 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 14888650 attgggttcatcgtctactccatcggcaagccgcttgatgcctggctcaaggacatgccc 14888709 Query: 252 gcg 254 ||| Sbjct: 14888710 gcg 14888712 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||| ||||| Sbjct: 14894346 aagcaggtgagtgtggtctgggatgcgtatgaggccaccaagggagcccatggactgtgc 14894405 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| || |||||| ||||||||||| |||||||||||| |||||| |||||||| Sbjct: 14894406 atcctcactgagtgggacgagttcaagaccttggactaccagaggatctttgacaacatg 14894465 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||| || || || |||||||| |||||||| || ||| | | || |||||||||||| Sbjct: 14894466 cagaaacctgcatttgtcttcgatgggcgcaatgtggtcgatcctgagaagctcagggag 14894525 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 |||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 14894526 attggcttcattgtctactctatcggcaagccgcttgatgcatggctcaaagacatgccc 14894585 Query: 252 gcg 254 ||| Sbjct: 14894586 gcg 14894588
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Minus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||||||||||||||| || || |||||||||||||||||||||| || ||| Sbjct: 147660 aagcaggtgagcgtggtgtgggatgcatatgaggccaccaagggggcccatggtgtctgc 147601 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 147600 atcctcaccgagtgggacgagttcaagaccttggactaccagaagatctttgacaacatg 147541 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 |||||||| || |||||||| || |||||||| || ||| | ||||| |||||||||||| Sbjct: 147540 cagaagcctgcattcgtctttgatgggcgcaatgtggtcgatgccgagaagctcagggag 147481 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 147480 attgggttcatcgtctactccatcggcaagccgcttgatgcctggctcaaggacatgccc 147421 Query: 252 gcg 254 ||| Sbjct: 147420 gcg 147418 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||| ||||| Sbjct: 141784 aagcaggtgagtgtggtctgggatgcgtatgaggccaccaagggagcccatggactgtgc 141725 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| || |||||| ||||||||||| |||||||||||| |||||| |||||||| Sbjct: 141724 atcctcactgagtgggacgagttcaagaccttggactaccagaggatctttgacaacatg 141665 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||| || || || |||||||| |||||||| || ||| | | || |||||||||||| Sbjct: 141664 cagaaacctgcatttgtcttcgatgggcgcaatgtggtcgatcctgagaagctcagggag 141605 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 |||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 141604 attggcttcattgtctactctatcggcaagccgcttgatgcatggctcaaagacatgccc 141545 Query: 252 gcg 254 ||| Sbjct: 141544 gcg 141542
>dbj|AK105768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E05, full insert sequence Length = 1865 Score = 260 bits (131), Expect = 4e-66 Identities = 215/243 (88%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||||||||||||||| || || |||||||||||||||||||||| || ||| Sbjct: 1312 aagcaggtgagcgtggtgtgggatgcatatgaggccaccaagggggcccatggtgtctgc 1371 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1372 atcctcaccgagtgggacgagttcaagaccttggactaccagaagatctttgacaacatg 1431 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 |||||||| || |||||||| || |||||||| || ||| | ||||| | |||||||||| Sbjct: 1432 cagaagcctgcattcgtctttgatgggcgcaatgtggtcgatgccgagaggctcagggag 1491 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1492 attgggttcatcgtctactccatcggcaagccgcttgatgcctggctcaaggacatgccc 1551 Query: 252 gcg 254 ||| Sbjct: 1552 gcg 1554
>dbj|AK103919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A09, full insert sequence Length = 1774 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||| ||||| Sbjct: 1298 aagcaggtgagtgtggtctgggatgcgtatgaggccaccaagggagcccatggactgtgc 1357 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| || |||||| ||||||||||| |||||||||||| |||||| |||||||| Sbjct: 1358 atcctcactgagtgggacgagttcaagaccttggactaccagaggatctttgacaacatg 1417 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||| || || || |||||||| |||||||| || ||| | | || |||||||||||| Sbjct: 1418 cagaaacctgcatttgtcttcgatgggcgcaatgtggtcgatcctgagaagctcagggag 1477 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 |||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1478 attggcttcattgtctactctatcggcaagccgcttgatgcatggctcaaagacatgccc 1537 Query: 252 gcg 254 ||| Sbjct: 1538 gcg 1540
>dbj|AK099096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023C02, full insert sequence Length = 1824 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Plus Query: 12 aagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtgtgc 71 ||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||| ||||| Sbjct: 1427 aagcaggtgagtgtggtctgggatgcgtatgaggccaccaagggagcccatggactgtgc 1486 Query: 72 atcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatg 131 ||||| || |||||| ||||||||||| |||||||||||| |||||| |||||||| Sbjct: 1487 atcctcactgagtgggacgagttcaagaccttggactaccagaggatctttgacaacatg 1546 Query: 132 cagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggag 191 ||||| || || || |||||||| |||||||| || ||| | | || |||||||||||| Sbjct: 1547 cagaaacctgcatttgtcttcgatgggcgcaatgtggtcgatcctgagaagctcagggag 1606 Query: 192 attggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgccc 251 |||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1607 attggcttcattgtctactctatcggcaagccgcttgatgcatggctcaaagacatgccc 1666 Query: 252 gcg 254 ||| Sbjct: 1667 gcg 1669
>gb|AY222335.1| Colocasia esculenta UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 163 bits (82), Expect = 7e-37 Identities = 202/242 (83%) Strand = Plus / Plus Query: 9 gtgaagcaggtgagcgtggtgtgggacgcgtacgaggccaccaagggggcccatgccgtg 68 |||||||||||||| ||| |||||||| || |||||||| |||||||| |||| || Sbjct: 1189 gtgaagcaggtgagggtgacatgggacgcctatgaggccacaaagggggctcatggtgtc 1248 Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||| |||| |||||| | ||||||||| || |||||||||| ||||| ||||| Sbjct: 1249 tgcatcttgacagagtgggatgagttcaagactctcgactaccagaggatctatgacaac 1308 Query: 129 atgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagg 188 |||||||||||||||||||| || || ||||||||| |||| || | || ||||| ||| Sbjct: 1309 atgcagaagccggccttcgtgtttgatgggcgcaacatcgtgaatgtagataagctgagg 1368 Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||||||||||||||| || ||||| || ||||| ||||||||||||||| Sbjct: 1369 gagatcggtttcattgtctactccattgggaagccactggatgcctggctcaaggacatg 1428 Query: 249 cc 250 || Sbjct: 1429 cc 1430
>ref|XM_468764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1446 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 129 atgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagg 188 |||||||||||||| ||||| ||||||||||||||||| || |||| || ||||| ||| Sbjct: 1312 atgcagaagccggcgttcgtgttcgacgggcgcaacgtggttgacgctgagaagctgagg 1371 Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 |||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1372 gagattggattcatcgtctactccattggcaagcctctcgatgcctggctcaaggacatg 1431 Query: 249 cc 250 || Sbjct: 1432 cc 1433
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 129 atgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagg 188 |||||||||||||| ||||| ||||||||||||||||| || |||| || ||||| ||| Sbjct: 66716 atgcagaagccggcgttcgtgttcgacgggcgcaacgtggttgacgctgagaagctgagg 66657 Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 |||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 66656 gagattggattcatcgtctactccattggcaagcctctcgatgcctggctcaaggacatg 66597 Query: 249 cc 250 || Sbjct: 66596 cc 66595
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 63 gccgtgtgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttc 122 ||||| |||||||| ||||||||| |||||||| ||| ||||||||| ||| | | Sbjct: 44945 gccgtctgcatcctcaccgagtgggacgagttccgccggctcgactaccagcggatgtac 44886 Query: 123 aacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaag 182 || |||||| |||||||||||| |||||||||| |||||||||||| || | |||||| Sbjct: 44885 gacgccatgcacaagccggccttcctcttcgacggccgcaacgtcgtcgacccggacaag 44826 Query: 183 ctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaag 242 ||| | || |||||| | |||||||||||||||||||||||||| ||||||| | Sbjct: 44825 ctccgccgcatcggcttcgtcgtctactccatcggcaagccgctcgaccactggctcagg 44766 Query: 243 gacatgcccgc 253 ||||||||||| Sbjct: 44765 gacatgcccgc 44755
>gb|AF053973.1| Populus tremula x Populus tremuloides UDP-glucose dehydrogenase gene (ugdh), complete cds Length = 1824 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||||||||||||||| |||||||| |||||||| || ||||| || ||||| |||||| Sbjct: 1440 aagctcagggagattggtttcattgtgtactccattggtaagccactggatgcatggctc 1499 Query: 240 aaggacatgcccgcgatcgc 259 ||||||||||| || ||||| Sbjct: 1500 aaggacatgcctgccatcgc 1519
>gb|AY466400.1| Populus tomentosa UDP-glucose dehydrogenase (ugdh) mRNA, complete cds Length = 1819 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| |||||||| |||||||| || ||||| || ||||| |||||| Sbjct: 1440 aagctgagggagattggtttcattgtgtactccattggtaagccactggatgcatggctc 1499 Query: 240 aaggacatgcccgcgatcgc 259 ||||||||||| || ||||| Sbjct: 1500 aaggacatgcctgccatcgc 1519
>ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.2 mRNA, complete cds Length = 1790 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| |||||||| |||||||| || ||||| ||||| | |||||| Sbjct: 1423 aagctaagggagattggtttcattgtttactccattggtaagcctctcgacgactggctc 1482 Query: 240 aaggacatgcc 250 ||||||||||| Sbjct: 1483 aaggacatgcc 1493 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||| ||||||||||| | ||||||||| | || || | |||||||||||| ||||| Sbjct: 1312 tgcatcatgaccgagtgggatgagttcaagaaccttgatttccagaagatctttgacaac 1371 Query: 129 atgcagaagccggccttcgtcttcga 154 |||||||| || || ||||| ||||| Sbjct: 1372 atgcagaaaccagctttcgtgttcga 1397
>ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.1 mRNA, complete cds Length = 1793 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| |||||||| |||||||| || ||||| ||||| | |||||| Sbjct: 1426 aagctaagggagattggtttcattgtttactccattggtaagcctctcgacgactggctc 1485 Query: 240 aaggacatgcc 250 ||||||||||| Sbjct: 1486 aaggacatgcc 1496 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||| ||||||||||| | ||||||||| | || || | |||||||||||| ||||| Sbjct: 1315 tgcatcatgaccgagtgggatgagttcaagaaccttgatttccagaagatctttgacaac 1374 Query: 129 atgcagaagccggccttcgtcttcga 154 |||||||| || || ||||| ||||| Sbjct: 1375 atgcagaaaccagctttcgtgttcga 1400
>gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10_6 mRNA, complete cds Length = 1793 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| |||||||| |||||||| || ||||| ||||| | |||||| Sbjct: 1426 aagctaagggagattggtttcattgtttactccattggtaagcctctcgacgactggctc 1485 Query: 240 aaggacatgcc 250 ||||||||||| Sbjct: 1486 aaggacatgcc 1496 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||| ||||||||||| | ||||||||| | || || | |||||||||||| ||||| Sbjct: 1315 tgcatcatgaccgagtgggatgagttcaagaaccttgatttccagaagatctttgacaac 1374 Query: 129 atgcagaagccggccttcgtcttcga 154 |||||||| || || ||||| ||||| Sbjct: 1375 atgcagaaaccagctttcgtgttcga 1400
>gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, complete sequence Length = 1746 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| |||||||| |||||||| || ||||| ||||| | |||||| Sbjct: 1426 aagctaagggagattggtttcattgtttactccattggtaagcctctcgacgactggctc 1485 Query: 240 aaggacatgcc 250 ||||||||||| Sbjct: 1486 aaggacatgcc 1496 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||| ||||||||||| | ||||||||| | || || | |||||||||||| ||||| Sbjct: 1315 tgcatcatgaccgagtgggatgagttcaagaatcttgatttccagaagatctttgacaac 1374 Query: 129 atgcagaagccggccttcgtcttcga 154 |||||||| || || ||||| ||||| Sbjct: 1375 atgcagaaaccagctttcgtgttcga 1400
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| |||||||| |||||||| || ||||| ||||| | |||||| Sbjct: 17099 aagctaagggagattggtttcattgtttactccattggtaagcctctcgacgactggctc 17040 Query: 240 aaggacatgcc 250 ||||||||||| Sbjct: 17039 aaggacatgcc 17029 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||| ||||||||||| | ||||||||| | || || | |||||||||||| ||||| Sbjct: 17210 tgcatcatgaccgagtgggatgagttcaagaaccttgatttccagaagatctttgacaac 17151 Query: 129 atgcagaagccggccttcgtcttcga 154 |||||||| || || ||||| ||||| Sbjct: 17150 atgcagaaaccagctttcgtgttcga 17125
>gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complete cds Length = 1486 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| |||||||| |||||||| || ||||| ||||| | |||||| Sbjct: 1373 aagctaagggagattggtttcattgtttactccattggtaagcctctcgacgactggctc 1432 Query: 240 aaggacatgcc 250 ||||||||||| Sbjct: 1433 aaggacatgcc 1443 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 69 tgcatcctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaac 128 |||||| ||||||||||| | ||||||||| | || || | |||||||||||| ||||| Sbjct: 1262 tgcatcatgaccgagtgggatgagttcaagaaccttgatttccagaagatctttgacaac 1321 Query: 129 atgcagaagccggccttcgtcttcga 154 |||||||| || || ||||| ||||| Sbjct: 1322 atgcagaaaccagctttcgtgttcga 1347
>ref|NM_123294.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G39320 mRNA, complete cds Length = 1763 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 108 taccagaagatcttcaacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtc 167 ||||||||||||||| ||||||||||||| ||||| || |||||||||| | ||| | Sbjct: 1361 taccagaagatcttcgacaacatgcagaaaccggcttttatcttcgacggaagaaacatt 1420 Query: 168 gtcaacgccgacaagctcagggagattggcttcattgtctactccatcggcaagccgctc 227 | || | ||||| | || |||||||| |||||||| |||||||| || ||||| || Sbjct: 1421 atgaatgttaacaagttaagagagattggtttcattgtttactccattggtaagccactt 1480 Query: 228 gatgcgtggctcaaggacatgcc 250 || | ||||||||||||||||| Sbjct: 1481 gacccatggctcaaggacatgcc 1503
>gb|BT013548.1| Lycopersicon esculentum clone 132272F, mRNA sequence Length = 1845 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 180 aagctcagggagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctc 239 ||||| ||||||||||| || || |||||||| || || ||||| || ||||| |||||| Sbjct: 1543 aagcttagggagattggatttatagtctactcaattggtaagcctctggatgcttggctc 1602 Query: 240 aaggacatgcc 250 ||||||||||| Sbjct: 1603 aaggacatgcc 1613
>gb|BT006380.1| Arabidopsis thaliana At5g39320 gene, complete cds Length = 1440 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 108 taccagaagatcttcaacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtc 167 ||||||||||||||| ||||||||||||| ||||| || |||||||||| | ||| | Sbjct: 1285 taccagaagatcttcgacaacatgcagaaaccggcttttatcttcgacggaagaaacatt 1344 Query: 168 gtcaacgccgacaagctcagggagattggcttcattgtctactccatcggcaagccgctc 227 | || | ||||| | || |||||||| |||||||| |||||||| || ||||| || Sbjct: 1345 atgaatgttaacaagttaagagagattggtttcattgtttactccattggtaagccactt 1404 Query: 228 gatgcgtggctcaaggacatgcc 250 || | ||||||||||||||||| Sbjct: 1405 gacccatggctcaaggacatgcc 1427
>dbj|AB009054.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL8 Length = 83450 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 108 taccagaagatcttcaacaacatgcagaagccggccttcgtcttcgacgggcgcaacgtc 167 ||||||||||||||| ||||||||||||| ||||| || |||||||||| | ||| | Sbjct: 166 taccagaagatcttcgacaacatgcagaaaccggcttttatcttcgacggaagaaacatt 225 Query: 168 gtcaacgccgacaagctcagggagattggcttcattgtctactccatcggcaagccgctc 227 | || | ||||| | || |||||||| |||||||| |||||||| || ||||| || Sbjct: 226 atgaatgttaacaagttaagagagattggtttcattgtttactccattggtaagccactt 285 Query: 228 gatgcgtggctcaaggacatgcc 250 || | ||||||||||||||||| Sbjct: 286 gacccatggctcaaggacatgcc 308
>ref|NM_121553.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G15490 mRNA, complete cds Length = 1778 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 78 accgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcagaag 137 ||||||||| ||||||||||| | || || | |||| |||||| | || |||||||| Sbjct: 1360 accgagtgggacgagttcaagaaacttgatttccagcggatctttgagaatatgcagaaa 1419 Query: 138 ccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggagattggc 197 ||||| || || || ||||| | ||||| ||| |||| || || |||||||||||||| Sbjct: 1420 ccggcttttgtttttgacggtagaaacgtggtcgacgctgataaactcagggagattggg 1479 Query: 198 ttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcc 250 || ||||| |||||||| || ||||| | || |||||||||||||||||| Sbjct: 1480 tttattgtttactccattggtaagccattggaccagtggctcaaggacatgcc 1532
>gb|BT015794.1| Arabidopsis thaliana At5g15490 mRNA, complete cds Length = 1443 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 78 accgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcagaag 137 ||||||||| ||||||||||| | || || | |||| |||||| | || |||||||| Sbjct: 1258 accgagtgggacgagttcaagaaacttgatttccagcggatctttgagaatatgcagaaa 1317 Query: 138 ccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggagattggc 197 ||||| || || || ||||| | ||||| ||| |||| || || |||||||||||||| Sbjct: 1318 ccggcttttgtttttgacggtagaaacgtggtcgacgctgataaactcagggagattggg 1377 Query: 198 ttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcc 250 || ||||| |||||||| || ||||| | || |||||||||||||||||| Sbjct: 1378 tttattgtttactccattggtaagccattggaccagtggctcaaggacatgcc 1430
>gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose dehydrogenase (At5g15490) mRNA, complete cds Length = 1793 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 78 accgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcagaag 137 ||||||||| ||||||||||| | || || | |||| |||||| | || |||||||| Sbjct: 1360 accgagtgggacgagttcaagaaacttgatttccagcggatctttgagaatatgcagaaa 1419 Query: 138 ccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggagattggc 197 ||||| || || || ||||| | ||||| ||| |||| || || |||||||||||||| Sbjct: 1420 ccggcttttgtttttgacggtagaaacgtggtcgacgctgataaactcagggagattggg 1479 Query: 198 ttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcc 250 || ||||| |||||||| || ||||| | || |||||||||||||||||| Sbjct: 1480 tttattgtttactccattggtaagccattggaccagtggctcaaggacatgcc 1532
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 78 accgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcagaag 137 ||||||||| ||||||||||| | || || | |||| |||||| | || |||||||| Sbjct: 33835 accgagtgggacgagttcaagaaacttgatttccagcggatctttgagaatatgcagaaa 33776 Query: 138 ccggccttcgtcttcgacgggcgcaacgtcgtcaacgccgacaagctcagggagattggc 197 ||||| || || || ||||| | ||||| ||| |||| || || |||||||||||||| Sbjct: 33775 ccggcttttgtttttgacggtagaaacgtggtcgacgctgataaactcagggagattggg 33716 Query: 198 ttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcc 250 || ||||| |||||||| || ||||| | || |||||||||||||||||| Sbjct: 33715 tttattgtttactccattggtaagccattggaccagtggctcaaggacatgcc 33663
>gb|AY619948.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 1 mRNA, complete cds Length = 1823 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 204 gtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcc 250 |||||||| || || |||||||| ||||| ||||||||||||||||| Sbjct: 1472 gtctactcaattggtaagccgctggatgcctggctcaaggacatgcc 1518
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 72 atcctgaccgagtggaacgagttc 95 |||||||||||||||||||||||| Sbjct: 2391320 atcctgaccgagtggaacgagttc 2391297
>gb|AY619949.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 2 mRNA, complete cds Length = 1768 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 204 gtctactccatcggcaagccgctcgatgcgtggctcaaggacatgcc 250 |||||||| || || || ||||| ||||| ||||||||||||||||| Sbjct: 1463 gtctactcaattggtaaaccgctggatgcctggctcaaggacatgcc 1509
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 atcctgaccgagtggaacgagttcaag 98 ||||||||||||||| ||||||||||| Sbjct: 11448 atcctgaccgagtgggacgagttcaag 11422
>ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT1G26570 mRNA, complete cds Length = 1712 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 1491 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 1550 Query: 249 cc 250 || Sbjct: 1551 cc 1552
>gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037P02 map E61794SA, complete sequence Length = 131645 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 tttatttgtatccaatgagctt 466 |||||||||||||||||||||| Sbjct: 44750 tttatttgtatccaatgagctt 44729
>gb|AY496079.1| Cinnamomum osmophloeum UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 44.1 bits (22), Expect = 0.44 Identities = 70/86 (81%) Strand = Plus / Plus Query: 75 ctgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcag 134 ||||| |||||| | |||||||||| || || ||||||||||| | | | || |||||| Sbjct: 1255 ctgactgagtgggatgagttcaaggctcttgattaccagaagatatacgataatatgcag 1314 Query: 135 aagccggccttcgtcttcgacgggcg 160 |||||||| || || || |||||||| Sbjct: 1315 aagccggcgtttgtgtttgacgggcg 1340
>gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1446 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 1372 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 1431 Query: 249 cc 250 || Sbjct: 1432 cc 1433
>emb|AL606464.11| Mouse DNA sequence from clone RP23-462P2 on chromosome 13 Contains the 3' end of the Slc17a1 gene for solute carrier family 17 vesicular glutamate transporter) member 1, the gene for a novel solute carrier family 17 (Slc17a) member, a U1 small nuclear ribonucleoprotein 1C (Snrp1c) pseudogene, a H2B histone family (H2b) pseudogene, the gene for a novel H2A histone family (H2a) member, a novel gene, the gene for the ortholog of human secretagogin, EF-hand calcium binding protein SCGN and the 3' end of a novel gene, complete sequence Length = 183698 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 agaatgtttatttgtatccaat 460 |||||||||||||||||||||| Sbjct: 94203 agaatgtttatttgtatccaat 94182
>gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 1490 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 1549 Query: 249 cc 250 || Sbjct: 1550 cc 1551
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 tttatttgtatccaatgagctt 466 |||||||||||||||||||||| Sbjct: 9491567 tttatttgtatccaatgagctt 9491546
>emb|BX816266.1|CNS0ABUF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 353 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 132 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 191 Query: 249 cc 250 || Sbjct: 192 cc 193
>emb|BX817654.1|CNS0AAWE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 647 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 426 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 485 Query: 249 cc 250 || Sbjct: 486 cc 487
>emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1649 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 1477 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 1536 Query: 249 cc 250 || Sbjct: 1537 cc 1538
>gb|AY084436.1| Arabidopsis thaliana clone 108221 mRNA, complete sequence Length = 1706 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 1489 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 1548 Query: 249 cc 250 || Sbjct: 1549 cc 1550
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89473 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 189 gagattggcttcattgtctactccatcggcaagccgctcgatgcgtggctcaaggacatg 248 ||||| || ||||| ||||||||||| || || ||||| ||| | ||||||||||| ||| Sbjct: 16271 gagatcggtttcatcgtctactccattggtaaaccgcttgattcatggctcaaggatatg 16212 Query: 249 cc 250 || Sbjct: 16211 cc 16210
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 tttatttgtatccaatgagctt 466 |||||||||||||||||||||| Sbjct: 9563264 tttatttgtatccaatgagctt 9563243
>ref|NM_000232.3| Homo sapiens sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA Length = 4229 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 ttgtaaaagaatgtttatttg 452 ||||||||||||||||||||| Sbjct: 1538 ttgtaaaagaatgtttatttg 1558
>gb|AC114459.6| Rattus norvegicus 4 BAC CH230-388N23 (Children's Hospital Oakland Research Institute) complete sequence Length = 190345 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 gctgttttgaggattgtaaaagaat 443 ||||||||||||||| ||||||||| Sbjct: 65445 gctgttttgaggattataaaagaat 65421
>gb|AC069208.24| Homo sapiens 12 BAC RP11-778H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167182 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 ttgttcccactttttccctct 499 ||||||||||||||||||||| Sbjct: 128774 ttgttcccactttttccctct 128794
>gb|AC156244.2| Xenopus tropicalis clone CH216-92I18, complete sequence Length = 140675 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 tgttttgaggattgtaaaaga 441 ||||||||||||||||||||| Sbjct: 124774 tgttttgaggattgtaaaaga 124794
>gb|AC117413.2| Homo sapiens 3 BAC RP11-51I4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 21688 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 atttgattgttcccacttttt 493 ||||||||||||||||||||| Sbjct: 20682 atttgattgttcccacttttt 20702
>emb|CR594277.1| full-length cDNA clone CS0DB008YL14 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 2615 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 ttgtaaaagaatgtttatttg 452 ||||||||||||||||||||| Sbjct: 1277 ttgtaaaagaatgtttatttg 1297
>gb|AC016817.6| Homo sapiens chromosome 10 clone RP11-13G8, complete sequence Length = 159981 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 gaatgtttatttgtatccaat 460 ||||||||||||||||||||| Sbjct: 76579 gaatgtttatttgtatccaat 76559
>gb|AC016920.14| Homo sapiens 3 BAC RP11-203L15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142127 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 atttgattgttcccacttttt 493 ||||||||||||||||||||| Sbjct: 995 atttgattgttcccacttttt 1015
>gb|AC093858.2| Homo sapiens BAC clone RP11-535C7 from 4, complete sequence Length = 151113 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 ttgtaaaagaatgtttatttg 452 ||||||||||||||||||||| Sbjct: 13399 ttgtaaaagaatgtttatttg 13379
>emb|BX248396.10| Zebrafish DNA sequence from clone CH211-219M13, complete sequence Length = 196673 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 caagctcagggagattggctt 199 ||||||||||||||||||||| Sbjct: 25809 caagctcagggagattggctt 25789
>dbj|AK026238.1| Homo sapiens cDNA: FLJ22585 fis, clone HSI02678 Length = 2037 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 ttgttcccactttttccctct 499 ||||||||||||||||||||| Sbjct: 472 ttgttcccactttttccctct 492
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 gattgtaaaagaatgtttatt 450 ||||||||||||||||||||| Sbjct: 168144 gattgtaaaagaatgtttatt 168124
>gb|U31116.1|HSU31116 Human beta-sarcoglycan A3b mRNA, complete cds Length = 2037 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 ttgtaaaagaatgtttatttg 452 ||||||||||||||||||||| Sbjct: 1559 ttgtaaaagaatgtttatttg 1579
>emb|Y09781.1|HSY09781 H.sapiens beta-sarcoglycan gene Length = 36159 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 ttgtaaaagaatgtttatttg 452 ||||||||||||||||||||| Sbjct: 21816 ttgtaaaagaatgtttatttg 21836
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 gccgctcgatgcgtggctcaagga 244 ||||||||| |||||||||||||| Sbjct: 197608 gccgctcgaggcgtggctcaagga 197631
>gb|L78833.1| Homo sapiens BRCA1 (BRCA1) gene, complete cds; ribosomal protein L21-like protein (rpL21) pseudogene, complete sequence; Rho7 (Rho7) and VatI (VatI) genes, complete cds; and unknown (ifp35) gene, exons 1 through 3 and partial cds Length = 117143 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 55514 caatgagcttatagcaattt 55495
>gb|AF357009.1|AF357008S2 Drosophila melanogaster 5.9 kb tandem repeat sequence, proximal region Length = 3547 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 tcgacgggcgcaacgtcgtcaacg 174 ||||| |||||||||||||||||| Sbjct: 1620 tcgacaggcgcaacgtcgtcaacg 1597
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcggcaagccgctcgatgcg 233 |||||||||||||||||||| Sbjct: 2162195 tcggcaagccgctcgatgcg 2162214
>ref|XM_658107.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5595.2), mRNA Length = 2826 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tcaacaacatgcagaagccg 140 |||||||||||||||||||| Sbjct: 1458 tcaacaacatgcagaagccg 1477
>gb|DQ478408.1| Homo sapiens neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; neighbor of BRCA1 gene 2 (NBR2) gene, complete cds; and early onset breast cancer 1 (BRCA1) gene, partial cds Length = 150505 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 124339 caatgagcttatagcaattt 124320
>gb|DQ190457.1| Homo sapiens clone mck41_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; hypothetical protein LOC10230 (NBR2) gene, complete cds; and breast cancer 1 early onset (BRCA1) gene, partial cds Length = 147576 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 121403 caatgagcttatagcaattt 121384
>gb|DQ190456.1| Homo sapiens clone mck578_U neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 150669 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 121443 caatgagcttatagcaattt 121424
>gb|DQ190455.1| Homo sapiens clone mck554_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 155470 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 124008 caatgagcttatagcaattt 123989
>gb|DQ190454.1| Homo sapiens clone mck43_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 150582 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 116862 caatgagcttatagcaattt 116843
>gb|DQ190453.1| Homo sapiens clone mck55_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 156879 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 122708 caatgagcttatagcaattt 122689
>gb|DQ190452.1| Homo sapiens clone mck94_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 156121 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 120345 caatgagcttatagcaattt 120326
>gb|DQ190451.1| Homo sapiens clone mck47_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 161765 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 120414 caatgagcttatagcaattt 120395
>gb|DQ190450.1| Homo sapiens clone mck432_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 167910 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 121290 caatgagcttatagcaattt 121271
>ref|XM_747336.1| Aspergillus fumigatus Af293 S-adenosylmethionine synthetase (Afu1g10630) partial mRNA Length = 1164 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 agctggactaccagaagatc 119 |||||||||||||||||||| Sbjct: 203 agctggactaccagaagatc 222
>gb|AC121596.3| Mus musculus BAC clone RP23-299I20 from 14, complete sequence Length = 203897 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 atacatgttcctcaatcctt 416 |||||||||||||||||||| Sbjct: 151429 atacatgttcctcaatcctt 151448
>gb|AC074397.7| Homo sapiens BAC clone RP11-598O8 from 7, complete sequence Length = 114576 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 atagcaatttgattgttccc 486 |||||||||||||||||||| Sbjct: 80155 atagcaatttgattgttccc 80174
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 gccgctcgatgcgtggctcaagga 244 ||||||||| |||||||||||||| Sbjct: 939374 gccgctcgaagcgtggctcaagga 939397
>gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence Length = 157615 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ctctccacaggagctgcagg 286 |||||||||||||||||||| Sbjct: 35416 ctctccacaggagctgcagg 35397
>emb|AL109944.19|HSJ737A23 Human DNA sequence from clone RP4-737A23 on chromosome 1p31.2-32.1 Contains part of the DAB1 gene for disabled homolog 1 (Drosophila) and two novel genes, complete sequence Length = 140373 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ttcagtcaggcataaaattg 339 |||||||||||||||||||| Sbjct: 25725 ttcagtcaggcataaaattg 25744
>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11 Length = 307337 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ccagaagatcttcaacaaca 129 |||||||||||||||||||| Sbjct: 161420 ccagaagatcttcaacaaca 161401
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcggcaagccgctcgatgcg 233 |||||||||||||||||||| Sbjct: 323823 tcggcaagccgctcgatgcg 323842
>gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosome 14, complete sequence Length = 223037 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 atacatgttcctcaatcctt 416 |||||||||||||||||||| Sbjct: 124483 atacatgttcctcaatcctt 124464
>emb|BX294135.1| Pirellula sp. strain 1 complete genome; segment 3/24 Length = 340750 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 agaagccggccttcgtcttcgacgggcgcaac 164 ||||||| |||||||| || |||||||||||| Sbjct: 310006 agaagccagccttcgtatttgacgggcgcaac 310037
>gb|AC117377.9| Homo sapiens 12 BAC RP11-406H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107100 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 tgtaaaagaatgtttatttg 452 |||||||||||||||||||| Sbjct: 763 tgtaaaagaatgtttatttg 744
>gb|AC126616.4| Homo sapiens 12 BAC RP11-149L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 14790 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 tgtaaaagaatgtttatttg 452 |||||||||||||||||||| Sbjct: 13529 tgtaaaagaatgtttatttg 13510
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 76 tgaccgagtggaacgagttcaaggagctggactaccagaagatcttcaacaacatgcaga 135 ||||||||||| ||||||||||| | || || ||||| || | || |||||||||||| Sbjct: 70647 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 70706 Query: 136 agcc 139 |||| Sbjct: 70707 agcc 70710
>gb|AC090132.3| Homo sapiens chromosome 8, clone RP11-813B8, complete sequence Length = 205004 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcctagttcctctccacagg 277 |||||||||||||||||||| Sbjct: 34214 gcctagttcctctccacagg 34195
>gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, complete sequence Length = 171721 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcctagttcctctccacagg 277 |||||||||||||||||||| Sbjct: 162587 gcctagttcctctccacagg 162568
>gb|AC148296.3| Pan troglodytes BAC clone CH251-545I16 from chromosome 7, complete sequence Length = 187553 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gcctagttcctctccacagg 277 |||||||||||||||||||| Sbjct: 115706 gcctagttcctctccacagg 115725
>emb|BX649643.10| Zebrafish DNA sequence from clone CH211-125M10 in linkage group 22, complete sequence Length = 177325 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tgattgttcccactttttcc 495 |||||||||||||||||||| Sbjct: 72078 tgattgttcccactttttcc 72059
>gb|AY273801.1| Homo sapiens breast cancer 1, early onset (BRCA1) gene, complete cds Length = 82899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 53133 caatgagcttatagcaattt 53114
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcggcaagccgctcgatgcg 233 |||||||||||||||||||| Sbjct: 2000824 tcggcaagccgctcgatgcg 2000805
>gb|AC009850.10|AC009850 Drosophila melanogaster, chromosome 2R, region 55E-55F, BAC clone BACR27L09, complete sequence Length = 173059 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 tgattgttcccactttttcc 495 |||||||||||||||||||| Sbjct: 158454 tgattgttcccactttttcc 158473
>gb|AC136785.1| Homo sapiens BAC clone RP11-124C9 from 4, complete sequence Length = 26713 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ttgtaaaagaatgtttattt 451 |||||||||||||||||||| Sbjct: 7184 ttgtaaaagaatgtttattt 7165
>gb|AC154686.2| Mus musculus BAC clone RP24-327C20 from chromosome 14, complete sequence Length = 181382 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aagatcttcaacaacatgca 133 |||||||||||||||||||| Sbjct: 129313 aagatcttcaacaacatgca 129294
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tgaccgagtggaacgagttc 95 |||||||||||||||||||| Sbjct: 4951117 tgaccgagtggaacgagttc 4951136
>gb|AY158943.1| Mus musculus histone protein Hist3h2bb gene, complete cds Length = 1378 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gaggccaccaagggggccca 61 |||||||||||||||||||| Sbjct: 1196 gaggccaccaagggggccca 1177
>gb|AC135721.4| Homo sapiens, clone CTD-3199J23, complete sequence Length = 150472 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 caatgagcttatagcaattt 476 |||||||||||||||||||| Sbjct: 86203 caatgagcttatagcaattt 86184
>gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51 of 73 of the complete sequence Length = 316981 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 tgattgttcccactttttcc 495 |||||||||||||||||||| Sbjct: 310808 tgattgttcccactttttcc 310827
>gb|AC005971.5|AC005971 Homo sapiens chromosome 17, clone hRPK.651_L_9, complete sequence Length = 192307 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgattgttcccactttttc 494 |||||||||||||||||||| Sbjct: 182209 ttgattgttcccactttttc 182190
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcggcaagccgctcgatgcg 233 |||||||||||||||||||| Sbjct: 2635445 tcggcaagccgctcgatgcg 2635426
>gb|AF100956.1|AF100956 Mus musculus major histocompatibility locus class II region; Fas-binding protein Daxx (DAXX) gene, partial cds; Bing1 (BING1), tapasin (tapasin), RalGDS-like factor (RLF), KE2 (KE2), BING4 (BING4), beta1, 3-galactosyl transferase (beta1,3-galactosyl transferase), ribosomal protein subunit S18 (RPS18), Sacm21 (Sacm21), H2K1(b) (H2-K1(b)), RING1 (RING1), KE6a (KE6a), KE4 (KE4), RXRbeta (RXRbeta), collagen alpha-2 (XI) (COLA11A2), H2-O alpha (H2-Oalpha), RING3 (RING3), H2-M alpha (H2-M alpha), H2-M beta 2 (H2-M beta2), and H2-M beta1 (H2-M beta1) genes, complete cds; and LMP 2 gene, partial cds Length = 273800 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcctagttcctctccacagg 277 |||||||||||||||||||| Sbjct: 260795 gcctagttcctctccacagg 260776
>emb|CR974422.14| Mouse DNA sequence from clone RP23-123G8 on chromosome 17, complete sequence Length = 189049 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcctagttcctctccacagg 277 |||||||||||||||||||| Sbjct: 41278 gcctagttcctctccacagg 41259
>emb|AJ009616.3|HSAJ9616 Homo sapiens chromosome 17 sequence from PAC RP1-188B3 region D17S842-D17S953 map 17p11.2, complete sequence Length = 81514 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgattgttcccactttttc 494 |||||||||||||||||||| Sbjct: 55938 ttgattgttcccactttttc 55919
>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence Length = 208059 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 agggagattggcttcattgt 205 |||||||||||||||||||| Sbjct: 45974 agggagattggcttcattgt 45955
>gb|CP000170.1| Drosophila melanogaster genomic scaffold 211000022279294 Length = 79135 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 tcgacgggcgcaacgtcgtcaacg 174 ||||| |||||||||||||||||| Sbjct: 5789 tcgacaggcgcaacgtcgtcaacg 5766
>gb|AF027865.1|MMMMH461 Mus musculus Major Histocompatibility Locus class II region Length = 138187 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcctagttcctctccacagg 277 |||||||||||||||||||| Sbjct: 9017 gcctagttcctctccacagg 8998
>emb|AL662809.14| Mouse DNA sequence from clone RP23-441I8 on chromosome 11, complete sequence Length = 103129 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gaggccaccaagggggccca 61 |||||||||||||||||||| Sbjct: 38205 gaggccaccaagggggccca 38224
>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete sequence Length = 202412 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 agctcagggagattggcttcattg 204 ||||||||||||||||||| |||| Sbjct: 88547 agctcagggagattggctttattg 88570
>gb|U35323.1|MMU35323 Mus musculus H2-M alpha chain (H2-Ma) gene, H2-M beta 2 chain (H2-Mb2) gene, H2-M beta 1 chain (H2-Mb1) gene, low molecular weight protein 2 Lmp2 (Lmp2) gene, complete cds Length = 53419 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcctagttcctctccacagg 277 |||||||||||||||||||| Sbjct: 39469 gcctagttcctctccacagg 39450
>emb|AL627105.13| Mouse DNA sequence from clone RP23-383D12 on chromosome 4, complete sequence Length = 190882 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gaggccaccaagggggccca 61 |||||||||||||||||||| Sbjct: 42503 gaggccaccaagggggccca 42522
>emb|AL645666.10| Mouse DNA sequence from clone RP23-356E21 on chromosome 4, complete sequence Length = 155103 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ttcagtcaggcataaaattg 339 |||||||||||||||||||| Sbjct: 52210 ttcagtcaggcataaaattg 52191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,367,204 Number of Sequences: 3902068 Number of extensions: 4367204 Number of successful extensions: 86064 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 85210 Number of HSP's gapped (non-prelim): 826 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
