| Clone Name | bags7i16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A22, full insert sequence Length = 622 Score = 341 bits (172), Expect = 2e-90 Identities = 307/352 (87%) Strand = Plus / Plus Query: 88 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 147 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 32 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 91 Query: 148 gcaagatgctcagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaa 207 |||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||||||| | Sbjct: 92 gcaagaggctcagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggca 151 Query: 208 agcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgattt 267 ||||||||| ||||| ||||| || |||||||| |||||||| |||||||||||||| || Sbjct: 152 agcaaaagaggaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatt 211 Query: 268 ccagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagca 327 ||||| ||| | | |||| |||||||||||||||||||||||||| || |||||||| Sbjct: 212 tcagaggaaggttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagca 271 Query: 328 agagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggt 387 |||||| | |||||| | ||| |||||||||||||| |||| |||||||| || || Sbjct: 272 ggagacagcggaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagt 331 Query: 388 gattcagatgcttctgaggcacgtcaccactgtgaagaactaaaggttgatg 439 ||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 332 gattcagatgcttctgaggcatgtcaccactgtgaagaactaagggttgatg 383
>dbj|AK059032.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C05, full insert sequence Length = 652 Score = 333 bits (168), Expect = 4e-88 Identities = 306/352 (86%) Strand = Plus / Plus Query: 88 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 147 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 65 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 124 Query: 148 gcaagatgctcagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaa 207 ||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||||||| | Sbjct: 125 gcaaggggctcagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggca 184 Query: 208 agcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgattt 267 ||||||||| ||||| ||||| || |||||||| |||||||| |||||||||||||| || Sbjct: 185 agcaaaagaggaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatt 244 Query: 268 ccagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagca 327 ||||| ||| | | |||| |||||||||||||||||||||||||| || |||||||| Sbjct: 245 tcagaggaaggttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagca 304 Query: 328 agagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggt 387 |||||| | |||||| | ||| |||||||||||||| |||| |||||||| || || Sbjct: 305 ggagacagcggaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagt 364 Query: 388 gattcagatgcttctgaggcacgtcaccactgtgaagaactaaaggttgatg 439 ||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 365 gattcagatgcttctgaggcatgtcaccactgtgaagaactaagggttgatg 416
>ref|XM_473769.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 333 Score = 327 bits (165), Expect = 2e-86 Identities = 291/333 (87%) Strand = Plus / Plus Query: 98 atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 157 |||||||||| ||| |||| ||||||||||||||||||| | |||||||||||||| ||| Sbjct: 1 atggacgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggct 60 Query: 158 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 217 |||||||| ||||||||||| |||||||| ||| |||||||||||||| |||||||||| Sbjct: 61 cagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggcaagcaaaagag 120 Query: 218 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 277 ||||| ||||| || |||||||| |||||||| |||||||||||||| || ||||| ||| Sbjct: 121 gaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatttcagaggaag 180 Query: 278 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 337 | | |||| |||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 181 gttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcg 240 Query: 338 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 397 | |||||| | ||| |||||||||||||| |||| |||||||| || |||||||||||| Sbjct: 241 gaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagtgattcagatg 300 Query: 398 cttctgaggcacgtcaccactgtgaagaactaa 430 ||||||||||| ||||||||||||||||||||| Sbjct: 301 cttctgaggcatgtcaccactgtgaagaactaa 333
>gb|AY108236.1| Zea mays PCO086968 mRNA sequence Length = 750 Score = 244 bits (123), Expect = 3e-61 Identities = 279/331 (84%) Strand = Plus / Plus Query: 98 atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 157 |||||||| | |||||||| | |||| || ||||| ||||| ||||| ||||| || ||| Sbjct: 147 atggacgccaacaggcgccaaggtgggattcagcagttgctggctgcggagcaggaggct 206 Query: 158 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 217 ||||||||||| ||||| || || |||||||| | |||||||||||| |||| ||||| Sbjct: 207 cagcaaattgtgaatgcggctagagctgctaagtcagcaaggcttaggcaagcgaaagag 266 Query: 218 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 277 ||||| ||||| || ||||| || |||||||| |||||||||||||| |||||||| ||| Sbjct: 267 gaggcagagagggaaatagccgaataccgtgcccagatggaggctgagttccagaggaag 326 Query: 278 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 337 || | |||| ||| |||||||||||||| || ||||| || || ||| ||||||||| Sbjct: 327 gtcgcagagagcagtggtgactctggtgcgaacgtcaagcgtctcgaggaagagacaacg 386 Query: 338 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 397 | ||||| ||||||||||| |||||||| |||| |||||||||||| || ||||||||| Sbjct: 387 gcgaaaatcgaacagctcaaccagcaggctgcaagcatctccccagatgtcattcagatg 446 Query: 398 cttctgaggcacgtcaccactgtgaagaact 428 ||||||||||| |||||||| |||||||||| Sbjct: 447 cttctgaggcatgtcaccaccgtgaagaact 477
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 163 bits (82), Expect = 8e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 349 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 42480 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 42421 Query: 350 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 409 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 42420 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 42361 Query: 410 gtcaccactgtgaagaactaaaggttgatg 439 ||||||||||||||||||||| |||||||| Sbjct: 42360 gtcaccactgtgaagaactaagggttgatg 42331 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 88 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 147 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 43208 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 43149 Query: 148 gcaagatgctcagcaaattgtaaatgctgccagggctg 185 |||||| ||||||||||| ||||||||||| ||||||| Sbjct: 43148 gcaagaggctcagcaaatagtaaatgctgctagggctg 43111 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 192 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 251 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 42676 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 42617 Query: 252 agatggaggctgatttccagag 273 ||||||||||||| || ||||| Sbjct: 42616 agatggaggctgaatttcagag 42595
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 163 bits (82), Expect = 8e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 349 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 30409102 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 30409043 Query: 350 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 409 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 30409042 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 30408983 Query: 410 gtcaccactgtgaagaactaaaggttgatg 439 ||||||||||||||||||||| |||||||| Sbjct: 30408982 gtcaccactgtgaagaactaagggttgatg 30408953 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 88 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 147 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 30409830 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 30409771 Query: 148 gcaagatgctcagcaaattgtaaatgctgccagggctg 185 |||||| ||||||||||| ||||||||||| ||||||| Sbjct: 30409770 gcaagaggctcagcaaatagtaaatgctgctagggctg 30409733 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 192 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 251 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 30409298 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 30409239 Query: 252 agatggaggctgatttccagag 273 ||||||||||||| || ||||| Sbjct: 30409238 agatggaggctgaatttcagag 30409217
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 163 bits (82), Expect = 8e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 349 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 158998 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 158939 Query: 350 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 409 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 158938 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 158879 Query: 410 gtcaccactgtgaagaactaaaggttgatg 439 ||||||||||||||||||||| |||||||| Sbjct: 158878 gtcaccactgtgaagaactaagggttgatg 158849 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 88 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 147 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 159726 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 159667 Query: 148 gcaagatgctcagcaaattgtaaatgctgccagggctg 185 |||||| ||||||||||| ||||||||||| ||||||| Sbjct: 159666 gcaagaggctcagcaaatagtaaatgctgctagggctg 159629 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 192 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 251 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 159194 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 159135 Query: 252 agatggaggctgatttccagag 273 ||||||||||||| || ||||| Sbjct: 159134 agatggaggctgaatttcagag 159113
>ref|XM_467332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 135 bits (68), Expect = 2e-28 Identities = 182/220 (82%) Strand = Plus / Plus Query: 209 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 268 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 304 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 363 Query: 269 cagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaa 328 ||||| ||| | | |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 364 cagaggaaggttgcggagagtagcggtgattctggtgcaaacgtaaaacggcttgagcaa 423 Query: 329 gagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtg 388 || || || ||||||| || || ||| ||||||| ||||| ||||||| || ||| Sbjct: 424 gaaactgacacgaaaattgcgcaactgaaggagcaggctgcaaatgtctcccctgaagtg 483 Query: 389 attcagatgcttctgaggcacgtcaccactgtgaagaact 428 || ||||||||||| ||||| || ||||| |||||||||| Sbjct: 484 atccagatgcttcttaggcatgtaaccaccgtgaagaact 523 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 120 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 177 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 238 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 295
>gb|AY103882.1| Zea mays PCO130190 mRNA sequence Length = 760 Score = 125 bits (63), Expect = 2e-25 Identities = 264/331 (79%) Strand = Plus / Plus Query: 98 atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 157 |||||||| | |||||||| ||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 142 atggacgcgaacaggcgccagagtgggatccagcagttgctggctgcggagcaggaggct 201 Query: 158 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 217 ||||||||||| ||||| || || ||||| || | || ||||| ||| |||||||||| Sbjct: 202 cagcaaattgtgaatgccgctagagctgccaagtcagcgaggctcaggcaagcaaaagag 261 Query: 218 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 277 ||||| ||| | || ||||| || |||||||| |||||||||||||| || ||||| ||| Sbjct: 262 gaggctgagcgggaaatagccgaataccgtgcccagatggaggctgagtttcagaggaag 321 Query: 278 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 337 | | |||| |||||| ||||| |||||||| ||||| || || ||| |||| || Sbjct: 322 gttgcagagagcagcggcgactccggtgcaaacgtcaagcgtctcgaggaagaaacggcg 381 Query: 338 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 397 | || || || || |||| |||||||| ||| ||||||||| || || ||||||||| Sbjct: 382 gcgaagatcgagcaactcacccagcaggccacaagcatctccccggatgtcattcagatg 441 Query: 398 cttctgaggcacgtcaccactgtgaagaact 428 |||||| |||| |||||||| || ||||||| Sbjct: 442 cttctgcggcatgtcaccaccgtcaagaact 472
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 209 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 268 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 28917561 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 28917502 Query: 269 cagag 273 ||||| Sbjct: 28917501 cagag 28917497 Score = 77.8 bits (39), Expect = 4e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 349 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 28917405 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 28917346 Query: 350 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 409 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 28917345 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 28917286 Query: 410 gtcaccactgtgaagaact 428 || ||||| |||||||||| Sbjct: 28917285 gtaaccaccgtgaagaact 28917267 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 120 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 177 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 28918325 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 28918268
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 209 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 268 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 110253 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 110194 Query: 269 cagag 273 ||||| Sbjct: 110193 cagag 110189 Score = 77.8 bits (39), Expect = 4e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 349 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 110097 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 110038 Query: 350 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 409 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 110037 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 109978 Query: 410 gtcaccactgtgaagaact 428 || ||||| |||||||||| Sbjct: 109977 gtaaccaccgtgaagaact 109959 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 120 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 177 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 111017 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 110960
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 209 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 268 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 619 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 560 Query: 269 cagag 273 ||||| Sbjct: 559 cagag 555 Score = 77.8 bits (39), Expect = 4e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 349 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 463 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 404 Query: 350 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 409 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 403 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 344 Query: 410 gtcaccactgtgaagaact 428 || ||||| |||||||||| Sbjct: 343 gtaaccaccgtgaagaact 325 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 120 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 177 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 1383 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1326
>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence Length = 1331 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaatcggcacgaggcttt 36 ||||||||||||||||||||||||||||||||||| Sbjct: 2 gcacgaggcctcgtgccgaatcggcacgaggcttt 36 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 gcctcgtgccgaatcggcacgaggc 33 |||||||||||| |||||||||||| Sbjct: 33 gcctcgtgccgattcggcacgaggc 9
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaatcggcacgaggc 33 ||||||||||||||||||||||||||||||||| Sbjct: 465 ggcacgaggcctcgtgccgaatcggcacgaggc 497 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 482 ggcacgaggcctcgtgccgaattcggcacgagg 450 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 gcctcgtgccgaatcggcacgaggc 33 |||||||||||| |||||||||||| Sbjct: 497 gcctcgtgccgattcggcacgaggc 473
>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds Length = 568 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaatcggcacgagg 32 |||||||||||||||||||||||||||||||| Sbjct: 75 ggcacgaggcctcgtgccgaatcggcacgagg 106 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgaggc 33 ||||||||||| |||||||||||| Sbjct: 106 cctcgtgccgattcggcacgaggc 83
>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP synthase gamma chain, mitochondrial precursor Length = 1225 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaatcggcacgagg 32 |||||||||||||||||||||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaatcggcacgagg 32 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgaggc 33 ||||||||||| |||||||||||| Sbjct: 32 cctcgtgccgattcggcacgaggc 9
>gb|AY157614.1| Ficus carica chitinase mRNA, complete cds Length = 1309 Score = 63.9 bits (32), Expect = 6e-07 Identities = 39/40 (97%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggcttttcc 39 ||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggcttttcc 40
>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform mRNA, partial cds Length = 911 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaatcggcacgagg 32 |||||||||||||||||||||||||||||||| Sbjct: 2 ggcacgaggcctcgtgccgaatcggcacgagg 33 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgaggc 33 ||||||||||| |||||||||||| Sbjct: 33 cctcgtgccgattcggcacgaggc 10
>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence Length = 780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaatcggcacgagg 31 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgaggc 33 ||||||||||| |||||||||||| Sbjct: 31 cctcgtgccgattcggcacgaggc 8
>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone oxidoreductase 10 kDa subunit precursor mRNA, complete cds; nuclear gene for mitochondrial product Length = 868 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 3 cacgaggcctcgtgccgaatcggcacgaggc 33 ||||||||||||||||||||||||||||||| Sbjct: 1 cacgaggcctcgtgccgaatcggcacgaggc 31 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 gcctcgtgccgaatcggcacgaggc 33 |||||||||||| |||||||||||| Sbjct: 31 gcctcgtgccgattcggcacgaggc 7
>emb|AJ005900.1|NTA005900 Nicotiana tabacum mRNA for V-ATPase subunit G (vag2 gene) Length = 552 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 285 agaccagcggtgactctggtgcaaatgtcaaacgccttgagcaaga 330 |||| |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 266 agactagcggtgattcgggtgctaatgtcaaacgccttgagcaaga 311 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 tgcagagcaagatgctcagcaaattgtaaatgctgccagg 181 |||||||||||| ||||| || || || |||||||||||| Sbjct: 123 tgcagagcaagaagctcaacatatagtcaatgctgccagg 162
>gb|DQ284486.1| Solanum tuberosum clone 020G11 ATPase-like mRNA, complete cds Length = 716 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 395 atgcttctgaggcacgtcaccactgtgaagaactaaa 431 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 341 atgcttctgaggcacgtaaccacagtgaagaactaaa 377 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 230 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 289 ||||||||||| | |||||| | ||||||||||| || ||||||||||| |||| Sbjct: 176 gagatagctgaattccgtgcttacatggaggctgaatttcagagaaagcttgaacagact 235 Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgag 325 || |||||||| ||||| ||||||||||| |||||| Sbjct: 236 agtggtgactcaggtgctaatgtcaaacgtcttgag 271
>dbj|AB230292.1| Aspergillus oryzae cDNA, contig sequence: AoEST7181 Length = 287 Score = 54.0 bits (27), Expect = 5e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggct 34 ||||||||||||||||||||| ||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggct 35
>dbj|AB180671.1| Plutella xylostella mRNA for ribosomal protein S9, complete cds Length = 709 Score = 54.0 bits (27), Expect = 5e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggct 34 ||||||||||||||||||||| ||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggct 35
>dbj|AB178055.1| Rana japonica GTH alpha mRNA for gonadotropin alpha-subunit, complete cds Length = 689 Score = 54.0 bits (27), Expect = 5e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggct 34 ||||||||||||||||||||| ||||||||||||| Sbjct: 6 ggcacgaggcctcgtgccgaattcggcacgaggct 40 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 23 ggcacgaggcctcgtgccgaat 2
>emb|AJ005899.1|NTA005899 Nicotiana tabacum mRNA for V-ATPase subunit G (vag1 gene) Length = 807 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 392 cagatgcttctgaggcacgtcaccactgtgaagaactaa 430 |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 346 cagatgctcctgaggcacgtaaccacagtgaagaactaa 384 Score = 50.1 bits (25), Expect = 0.008 Identities = 82/101 (81%) Strand = Plus / Plus Query: 230 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 289 ||||||||||| | ||||| | ||||||||||| || ||||||||||| |||| Sbjct: 184 gagatagctgaatttcgtgcttacatggaggctgagtttcagagaaagcttgaacagact 243 Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagcaaga 330 || |||||||| || || ||||||||||| ||||||||||| Sbjct: 244 agtggtgactcgggcgctaatgtcaaacgtcttgagcaaga 284
>gb|AF332963.1| Polytomella sp. Pringsheim 198.80 ferrochelatase mRNA, complete cds Length = 2227 Score = 54.0 bits (27), Expect = 5e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggct 34 ||||||||||||||||||||| ||||||||||||| Sbjct: 131 ggcacgaggcctcgtgccgaattcggcacgaggct 97 Score = 52.0 bits (26), Expect = 0.002 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggctttt 37 ||||||||||||||||||||| ||||||||||| |||| Sbjct: 114 ggcacgaggcctcgtgccgaattcggcacgaggatttt 151
>gb|AY639596.1| Salicornia herbacea tonoplast intrinsic protein gamma mRNA, complete cds Length = 1108 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggc 34
>gb|AF499715.1| Thellungiella halophila lipid transfer protein 4-like protein mRNA, complete cds Length = 667 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 6 ggcacgaggcctcgtgccgaattcggcacgaggc 39 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 23 ggcacgaggcctcgtgccgaat 2
>gb|AY135220.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc2) mRNA, complete cds Length = 840 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgaggct 34 |||||||||||||||||||| ||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgaggct 34
>gb|DQ118594.1| Karlodinium micrum chloroplast psaE mRNA, complete cds; nuclear gene for chloroplast product Length = 1328 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 714 ggcacgaggcctcgtgccgaattcggcacgaggc 681 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 697 ggcacgaggcctcgtgccgaattcggcacgagg 729
>dbj|AB226176.1| Aspergillus oryzae cDNA, contig sequence: AoEST3034 Length = 651 Score = 52.0 bits (26), Expect = 0.002 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggctttt 37 ||||||||||||||||||||| ||||||||||| |||| Sbjct: 81 ggcacgaggcctcgtgccgaattcggcacgagggtttt 118 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 98 ggcacgaggcctcgtgccgaat 77
>dbj|AB077106.1| Prunus persica mRNA, microsatellite marker M1a Length = 605 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggc 34
>gb|AF466768.1| Mus musculus monoclonal antibody BBK-1 light chain mRNA, complete cds Length = 993 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggc 34
>dbj|AB180672.1| Plutella xylostella mRNA for ribosomal protein S23, complete cds Length = 615 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggc 34
>dbj|AB180450.1| Plutella xylostella mRNA for cellular retinoic acid binding protein, complete cds Length = 806 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggc 34
>dbj|AB180430.1| Plutella xylostella mRNA for Ribosomal protein L37A, complete cds Length = 353 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggc 34
>dbj|AB180425.1| Plutella xylostella mRNA for Ribosomal protein S28, complete cds Length = 437 Score = 52.0 bits (26), Expect = 0.002 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggctttt 37 ||||||||||||||||||||| ||||||||||| |||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggatttt 38
>dbj|AB094480.1| Mus musculus LE51 mRNA for hypothetical protein, complete cds Length = 1048 Score = 52.0 bits (26), Expect = 0.002 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggctttt 37 ||||||||||||||||||||| ||||||||||| |||| Sbjct: 454 ggcacgaggcctcgtgccgaattcggcacgaggttttt 417 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 437 ggcacgaggcctcgtgccgaattcggcacgagg 469
>dbj|AK068212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D16, full insert sequence Length = 1366 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 120 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 177 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 1069 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1126
>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence Length = 1502 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 8 ggcctcgtgccgaatcggcacgaggctttt 37 ||||||||||||||||||||||||| |||| Sbjct: 1422 ggcctcgtgccgaatcggcacgaggttttt 1393 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgaggc 33 ||||||||||| |||||||||||| Sbjct: 1398 cctcgtgccgattcggcacgaggc 1421
>ref|NM_026928.1| Mus musculus RIKEN cDNA 1810014F10 gene (1810014F10Rik), mRNA Length = 1048 Score = 52.0 bits (26), Expect = 0.002 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggctttt 37 ||||||||||||||||||||| ||||||||||| |||| Sbjct: 454 ggcacgaggcctcgtgccgaattcggcacgaggttttt 417 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 437 ggcacgaggcctcgtgccgaattcggcacgagg 469
>gb|AY684302.1| Sparus aurata slow troponin T 2 (sTnT2) mRNA, complete cds Length = 1020 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>gb|BT016336.1| Zea mays clone Contig169 mRNA sequence Length = 576 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 573 ggcacgaggcctcgtgccgaattcggcacgagg 541 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa 21 ||||||||||||||||||||| Sbjct: 556 ggcacgaggcctcgtgccgaa 576
>gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate dehydrogenase (GPD1) mRNA, partial cds Length = 630 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgaggct 34 ||||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggct 25 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 gcctcgtgccgaatcggcacgagg 32 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|DQ187323.1| Capsaspora owczarzaki Shwachman-Bodian-Diamond protein-like protein mRNA, partial cds Length = 694 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>emb|AJ416378.1|PSP416378 Polytomella sp. 'Pringsheim 198.80' mRNA for mitochondrial cytochrome c (cyc gene) Length = 643 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>emb|AJ879064.1| Capsicum chinense mRNA for ATPase Length = 617 Score = 50.1 bits (25), Expect = 0.008 Identities = 79/97 (81%) Strand = Plus / Plus Query: 230 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 289 ||||||||||| | |||||| | |||||||| || || ||||||||||| |||| Sbjct: 198 gagatagctgaattccgtgcttacatggaggccgagtttcagagaaagcttgaacagact 257 Query: 290 agcggtgactctggtgcaaatgtcaaacgccttgagc 326 || |||||||| ||||| ||||||||||| ||||||| Sbjct: 258 agtggtgactcaggtgctaatgtcaaacggcttgagc 294 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 393 agatgcttctgaggcacgtcaccactgtgaagaactaa 430 |||||||||||||||| || || || |||||||||||| Sbjct: 361 agatgcttctgaggcatgtaacgacagtgaagaactaa 398
>emb|AJ421017.1|GHI421017 Gossypium hirsutum mRNA for ADP-ribosylation factor (ARF1 gene) Length = 828 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>emb|AJ558193.2|PSP558193 Polytomella sp. Pringsheim 198.80 mitochondrial partial mRNA for ATP synthase associated protein MAAP67 (atpR gene) Length = 2203 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>gb|DQ118596.1| Karlodinium micrum isolate 3817 chloroplast glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds; nuclear gene for chloroplast product Length = 1358 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 2 ggcacgaggcctcgtgccgaattcggcacgagg 34
>gb|AY093683.1| Suaeda maritima subsp. salsa mitogen-activated protein kinase kinase mRNA, complete cds Length = 1952 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>dbj|AB229209.1| Aspergillus oryzae cDNA, contig sequence: AoEST6088 Length = 688 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 7 ggcacgaggcctcgtgccgaattcggcacgagg 39 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 24 ggcacgaggcctcgtgccgaat 3
>gb|AY963297.1| Trichomonas vaginalis putative TBP-associated protein mRNA, complete cds Length = 1410 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>dbj|AB189027.1| Plutella xylostella mRNA for receptor for activated protein kinase C homolog, complete cds Length = 1132 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>dbj|AB180424.1| Plutella xylostella mRNA for Ribosomal protein L21, complete cds Length = 549 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>dbj|AB180417.1| Plutella xylostella mRNA for Ribosomal protein S29, complete cds Length = 472 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33
>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone IMAGE:3940750), complete cds Length = 847 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 8 ggcctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||||| Sbjct: 25 ggcctcgtgccgaatcggcacgagg 1 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgaggc 33 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgattcggcacgaggc 24
>gb|AY112040.1| Zea mays CL19964_1 mRNA sequence Length = 634 Score = 50.1 bits (25), Expect = 0.008 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 3 cacgaggcctcgtgccgaa-tcggcacgaggct 34 ||||||||||||||||||| ||||||||||||| Sbjct: 634 cacgaggcctcgtgccgaattcggcacgaggct 602
>ref|NM_001010842.1| Gallus gallus heat shock protein 25 (HSP25), mRNA Length = 918 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA Length = 1541 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgaggc 33 |||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggc 24 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 gcctcgtgccgaatcggcacgagg 32 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence Length = 711 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgaggc 33 |||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggc 24 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 gcctcgtgccgaatcggcacgagg 32 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA, complete cds Length = 654 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA sequence Length = 1348 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaatcggcacgaggc 33 |||||||||||||||||||||| ||||||||| Sbjct: 1 gcacgaggcctcgtgccgaatc-gcacgaggc 31
>gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA Length = 1224 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 gcctcgtgccgaatcggcacgagg 32 |||||||||||||||||||||||| Sbjct: 24 gcctcgtgccgaatcggcacgagg 1 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgaggc 33 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgattcggcacgaggc 24
>gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompatibility class I receptor mRNA, complete cds Length = 1293 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 9 gcctcgtgccgaatcggcacgagg 32 |||||||||||||||||||||||| Sbjct: 1088 gcctcgtgccgaatcggcacgagg 1111 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgaggct 34 ||||||||||| ||||||||||||| Sbjct: 1111 cctcgtgccgattcggcacgaggct 1087
>gb|AY149472.1| Acinetobacter baumannii strain 8399 siderophore and iron transport locus, complete sequence Length = 21931 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 340 aaaaattgaacagctcaagcagca 363 |||||||||||||||||||||||| Sbjct: 3128 aaaaattgaacagctcaagcagca 3151
>gb|AY850179.1| Amborella trichopoda AGL2 mRNA, complete cds Length = 1107 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>dbj|AB154518.1| Gallus gallus Hsp25 mRNA for heat shock protein 25, complete cds Length = 918 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32
>gb|BC030047.1| Mus musculus cDNA clone IMAGE:1179272, with apparent retained intron Length = 994 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||||| ||||||||||| Sbjct: 840 gcacgaggcctcgtgccgaattcggcacgagg 809
>gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA (cDNA clone MGC:10300 IMAGE:3941377), complete cds Length = 707 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgaggc 33 |||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggc 24 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ggcctcgtgccgaatcggcacgagg 32 ||||||||||||| ||||||||||| Sbjct: 25 ggcctcgtgccgattcggcacgagg 1
>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds Length = 1770 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgaggc 33 |||||||||||||||||||||||| Sbjct: 24 cctcgtgccgaatcggcacgaggc 1 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 gcctcgtgccgaatcggcacgagg 32 |||||||||||| ||||||||||| Sbjct: 1 gcctcgtgccgattcggcacgagg 24
>gb|AY850324.1| Magnaporthe grisea histone H4-like protein mRNA, complete cds Length = 863 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||||| ||||||||||| Sbjct: 23 gcacgaggcctcgtgccgaattcggcacgagg 54
>emb|AJ421970.1|VVU421970 Vulpes vulpes mRNA for sperm protein 8 (SP8) Length = 879 Score = 48.1 bits (24), Expect = 0.033 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||||| ||||||||||| Sbjct: 6 gcacgaggcctcgtgccgaattcggcacgagg 37
>gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds Length = 778 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgaatcggcacgagg 1
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence Length = 1546 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||| Sbjct: 1116 cctcgtgccgaatcggcacgagg 1138
>gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence Length = 1276 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgaatcggcacgagg 1
>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence Length = 110895 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 299 tctggtgcaaatgtcaaacgccttgagcaagagac 333 |||||||| |||||||| || |||||||||||||| Sbjct: 39 tctggtgctaatgtcaagcgacttgagcaagagac 73
>emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC synthase 1.1 (acs1.1 gene) Length = 941 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgaggc 33 ||||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgaggc 23
>gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribosomal protein S20 mRNA, complete cds Length = 536 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||| Sbjct: 76 cctcgtgccgaatcggcacgagg 54
>gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA Length = 1395 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23
>dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393 Length = 731 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 10 cctcgtgccgaatcggcacgagg 32 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23
>gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-49l23, complete sequence Length = 128239 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 299 tctggtgcaaatgtcaaacgccttgagcaagagac 333 |||||||| |||||||| || |||||||||||||| Sbjct: 102402 tctggtgctaatgtcaagcgacttgagcaagagac 102436
>ref|NM_118502.2| Arabidopsis thaliana unknown protein AT4G23710 mRNA, complete cds Length = 697 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 174 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 122 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 171
>ref|NM_180158.2| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390 (VMA10) transcript variant AT3G01390.2 mRNA, complete cds Length = 834 Score = 44.1 bits (22), Expect = 0.52 Identities = 88/110 (80%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 184 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 268 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 327 Query: 185 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 234 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 328 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 377
>ref|NM_111005.3| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390 (VMA10) transcript variant AT3G01390.1 mRNA, complete cds Length = 665 Score = 44.1 bits (22), Expect = 0.52 Identities = 88/110 (80%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 184 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 99 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158 Query: 185 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 234 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
>gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA Length = 5154 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgag 31 |||||||||||||||||||||| Sbjct: 22 cctcgtgccgaatcggcacgag 1
>emb|AL627308.20| Human DNA sequence from clone RP11-211A18 on chromosome 1 Contains the 5' end of the CDC42BPA gene for CDC42 binding protein kinase alpha (DMPK-like), a cathepsin B (CTSB) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 124156 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 ttttgccacttccagctgtaat 535 |||||||||||||||||||||| Sbjct: 3878 ttttgccacttccagctgtaat 3899
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 174 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 9976 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 10025
>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone F9D16 (ESSAII project) Length = 119430 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 174 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 68385 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 68434
>emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processed transcript RNA for oestrogen receptor alpha (ERalpha gene) Length = 3812 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgagg 32 |||||||||||||||||||||| Sbjct: 31 ctcgtgccgaatcggcacgagg 10
>gb|AY114730.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G AVMA10 (At3g01390) mRNA, complete cds Length = 536 Score = 44.1 bits (22), Expect = 0.52 Identities = 88/110 (80%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 184 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 28 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 87 Query: 185 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 234 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 88 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 137
>dbj|AB229215.1| Aspergillus oryzae cDNA, contig sequence: AoEST6094 Length = 124 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 24 ggcacgaggcctcgtgccgaat 3
>dbj|AB229130.1| Aspergillus oryzae cDNA, contig sequence: AoEST6008 Length = 343 Score = 44.1 bits (22), Expect = 0.52 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 10 cctcgtgccgaat-cggcacgaggcttttc 38 ||||||||||||| |||||||||||||||| Sbjct: 1 cctcgtgccgaattcggcacgaggcttttc 30
>dbj|AB226552.1| Aspergillus oryzae cDNA, contig sequence: AoEST3414 Length = 751 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 23 ggcacgaggcctcgtgccgaat 2
>dbj|AB224727.1| Aspergillus oryzae cDNA, contig sequence: AoEST1576 Length = 1145 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 96 ggcacgaggcctcgtgccgaat 75
>gb|AY072365.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10) (At3g01390) mRNA, complete cds Length = 654 Score = 44.1 bits (22), Expect = 0.52 Identities = 88/110 (80%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 184 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 99 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158 Query: 185 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 234 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
>gb|AF397911.1|AF397911 Mus musculus clone IMAGE:583715 mRNA sequence Length = 1108 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 22 ggcacgaggcctcgtgccgaat 1 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccga 20 |||||||||||||||||||| Sbjct: 5 ggcacgaggcctcgtgccga 24
>gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA Length = 2338 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgag 31 |||||||||||||||||||||| Sbjct: 22 cctcgtgccgaatcggcacgag 1
>gb|BC028650.1| Mus musculus coronin 7, mRNA (cDNA clone IMAGE:1068082), with apparent retained intron Length = 1214 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 808 ggcacgaggcctcgtgccgaat 787
>gb|AY241394.1| Melopsittacus undulatus Mn superoxide dismutase (SOD2) mRNA, complete cds Length = 1101 Score = 44.1 bits (22), Expect = 0.52 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||||| ||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgcagaattcggcacgaggc 34
>emb|BX825355.1|CNS0A6BQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZE11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 613 Score = 44.1 bits (22), Expect = 0.52 Identities = 88/110 (80%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 184 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 48 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 107 Query: 185 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 234 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 108 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 157
>gb|AF134160.1|AF134160 Homo sapiens claudin-1 (CLDN1) mRNA, complete cds Length = 1237 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 24 ggcacgaggcctcgtgccgaat 3
>gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRNA, complete cds Length = 1337 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgagg 32 |||||||||||||||||||||| Sbjct: 1274 ctcgtgccgaatcggcacgagg 1253
>gb|U80078.1|MMU80078 Mus musculus transcription factor BFCOL1 mRNA, complete cds Length = 2426 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggcacgaggcctcgtgccgaat 22 |||||||||||||||||||||| Sbjct: 24 ggcacgaggcctcgtgccgaat 3
>gb|BT003107.1| Arabidopsis thaliana At4g23710 mRNA, complete cds Length = 321 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 174 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 16 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 65
>emb|AJ005901.1|ATA005901 Arabidopsis thaliana mRNA for V-ATPase subunit G (vag1 gene) Length = 528 Score = 44.1 bits (22), Expect = 0.52 Identities = 88/110 (80%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 184 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 66 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 125 Query: 185 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 234 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 126 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 175
>gb|AF184068.1|AF184068 Citrus limon vacuolar membrane ATPase subunit G (LVMA10) mRNA, complete cds Length = 500 Score = 44.1 bits (22), Expect = 0.52 Identities = 121/154 (78%) Strand = Plus / Plus Query: 120 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgcca 179 ||||||| ||||||||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 113 gtggaattcagcaattgctggctgctgaacaagaagctcaacacattgttgctgctgcca 172 Query: 180 gggctgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctg 239 | ||| |||| ||| || || | | |||| ||||||||||| || || ||||| |||| Sbjct: 173 gaaatgcaaaaatggctagactgaagcaagccaaagaagaggctgaaagggagattgctg 232 Query: 240 agtaccgtgcgcagatggaggctgatttccagag 273 | || || || ||| ||||| ||| |||||||| Sbjct: 233 aatatcgagctcaggtggagcgtgagttccagag 266
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 44.1 bits (22), Expect = 0.52 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 4 acgaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||||| ||||||||||| Sbjct: 790 acgaggcctcgtgccgaattcggcacgagg 819
>gb|AF181688.1|AF181688 Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10) mRNA, complete cds Length = 652 Score = 44.1 bits (22), Expect = 0.52 Identities = 88/110 (80%) Strand = Plus / Plus Query: 125 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 184 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 70 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 129 Query: 185 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 234 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 130 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 179
>gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda light chain (Igl@) mRNA, complete cds Length = 775 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 cctcgtgccgaatcggcacgag 31 |||||||||||||||||||||| Sbjct: 30 cctcgtgccgaatcggcacgag 9
>gb|AY609850.1| Sus scrofa clone Clu_3547.scr.msk.p1.Contig4, mRNA sequence Length = 2407 Score = 44.1 bits (22), Expect = 0.52 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 10 cctcgtgccgaat-cggcacgaggcttttc 38 ||||||||||||| |||||||||||||||| Sbjct: 653 cctcgtgccgaattcggcacgaggcttttc 682
>gb|BT016288.1| Zea mays clone Contig121 mRNA sequence Length = 1032 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 gcctcgtgccgaatcggcacgaggc 33 ||||||||||||||| ||||||||| Sbjct: 179 gcctcgtgccgaatcagcacgaggc 203
>gb|AY533301.1| Petroselinum crispum mitogen-activated protein kinase kinase 2 (MKK2) mRNA, complete cds Length = 1460 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 35 ctcgtgccgaatcggcacgag 15
>emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein (fd-4' gene) Length = 2385 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9C11 mRNA, complete cds Length = 774 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>emb|CR715651.2|CNS0GF5B Tetraodon nigroviridis full-length cDNA Length = 1034 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 ggaggctgatttccagagaaa 276 ||||||||||||||||||||| Sbjct: 852 ggaggctgatttccagagaaa 872
>gb|AY223234.1| Schistosoma japonicum clone ZZD348 mRNA sequence Length = 1004 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 7 aggcctcgtgccgaa-tcggcacgaggct 34 ||||||||||||||| ||||||||||||| Sbjct: 348 aggcctcgtgccgaattcggcacgaggct 320
>gb|AY223027.1| Schistosoma japonicum clone ZZD1140 mRNA sequence Length = 907 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 10 cctcgtgccgaat-cggcacgaggctttt 37 ||||||||||||| ||||||||||||||| Sbjct: 111 cctcgtgccgaattcggcacgaggctttt 83
>gb|AC099558.2| Homo sapiens chromosome 3 clone RP11-680P23, complete sequence Length = 180049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 gtaaatgctgccagggctgct 187 ||||||||||||||||||||| Sbjct: 56512 gtaaatgctgccagggctgct 56532
>gb|BT008918.1| Triticum aestivum clone wpa1c.pk011.o13:fis, full insert mRNA sequence Length = 1151 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gcacgaggcctcgtgccgaat 22 ||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaat 21
>emb|AJ821837.1| Guillardia theta partial mRNA for putative regulatory subunit of protein phosphatase 2A (supase2A gene) Length = 476 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tgccgaatcggcacgaggctt 35 ||||||||||||||||||||| Sbjct: 77 tgccgaatcggcacgaggctt 57
>emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for putative transcription factor (ceh-43 gene) Length = 1039 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>dbj|AB229047.1| Aspergillus oryzae cDNA, contig sequence: AoEST5924 Length = 363 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 5 cgaggcctcgtgccgaa-tcggcacgagg 32 ||||||||||||||||| ||||||||||| Sbjct: 29 cgaggcctcgtgccgaattcggcacgagg 1
>dbj|AB226784.1| Aspergillus oryzae cDNA, contig sequence: AoEST3646 Length = 742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gcacgaggcctcgtgccgaat 22 ||||||||||||||||||||| Sbjct: 22 gcacgaggcctcgtgccgaat 2
>dbj|AB224198.1| Aspergillus oryzae cDNA, contig sequence: AoEST1040 Length = 925 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gcacgaggcctcgtgccgaat 22 ||||||||||||||||||||| Sbjct: 22 gcacgaggcctcgtgccgaat 2
>dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, complete cds Length = 2427 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 11 ctcgtgccgaatcggcacgag 31
>gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA, complete cds Length = 1601 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin domain-containing protein F02G3.1 mRNA, complete cds Length = 3261 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 9 ctcgtgccgaatcggcacgag 29
>gb|DQ208703.1| Litopenaeus vannamei clone gi240 anti-lipopolysaccharide AA-K isoform mRNA, complete cds Length = 727 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 8 ggcctcgtgccgaa-tcggcacgaggctt 35 |||||||||||||| |||||||||||||| Sbjct: 5 ggcctcgtgccgaattcggcacgaggctt 33
>gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen mRNA, partial cds Length = 826 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence Length = 199721 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 tggaggctgatttccagagaa 275 ||||||||||||||||||||| Sbjct: 149858 tggaggctgatttccagagaa 149878
>gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacting protein 17 mRNA, complete cds Length = 903 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 28 ctcgtgccgaatcggcacgag 8
>gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, complete sequence Length = 196773 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 gtaaatgctgccagggctgct 187 ||||||||||||||||||||| Sbjct: 134646 gtaaatgctgccagggctgct 134666
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein, complete cds Length = 946 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Rah1p (rah1) mRNA, complete cds Length = 503 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgag 21
>gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protein 6511 mRNA, complete cds Length = 1907 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 15 ctcgtgccgaatcggcacgag 35
>gb|AY109271.1| Zea mays PCO074636 mRNA sequence Length = 503 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 46 ctcgtgccgaatcggcacgag 26
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 28 ctcgtgccgaatcggcacgag 8
>gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgag 21
>gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, complete cds Length = 777 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 4 ctcgtgccgaatcggcacgag 24
>dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalectin-VIa, complete cds Length = 1427 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 10 ctcgtgccgaatcggcacgag 30
>gb|AY609807.1| Sus scrofa clone Clu_32102.scr.msk.p1.Contig3, mRNA sequence Length = 1935 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 6 gaggcctcgtgccgaa-tcggcacgaggc 33 |||||||||||||||| |||||||||||| Sbjct: 346 gaggcctcgtgccgaattcggcacgaggc 374
>gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog (CycH) mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 27 ctcgtgccgaatcggcacgag 7
>emb|AJ420446.1|HSA420446 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1646617 Length = 778 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggcacgaggcctcgtgccgaa 21 ||||||||||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaa 21
>dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohormone, complete cds Length = 620 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctcgtgccgaatcggcacgag 31 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>dbj|AB015609.1| Nicotiana sylvestris mRNA for S-adenosylmethionine decarboxylase, complete cds Length = 1537 Score = 42.1 bits (21), Expect = 2.1 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 9 gcctcgtgccgaat-cggcacgaggcttttccc 40 |||||||||||||| ||||||||||||| |||| Sbjct: 1340 gcctcgtgccgaattcggcacgaggcttgtccc 1372
>gb|BT016486.1| Zea mays clone Contig319 mRNA sequence Length = 1743 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 7 aggcctcgtgccgaa-tcggcacgaggc 33 ||||||||||||||| |||||||||||| Sbjct: 1043 aggcctcgtgccgaattcggcacgaggc 1016
>gb|BT017516.1| Zea mays clone EL01N0419F10.c mRNA sequence Length = 1107 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 8 ggcctcgtgccgaa-tcggcacgaggct 34 |||||||||||||| ||||||||||||| Sbjct: 405 ggcctcgtgccgaattcggcacgaggct 378
>gb|AC140658.2| Homo sapiens chromosome 16 clone RP11-812E19, complete sequence Length = 188406 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 170354 gcagatggaggctgatttcc 170335
>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence Length = 215406 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 aaattgtaaatgctgccagg 181 |||||||||||||||||||| Sbjct: 1962 aaattgtaaatgctgccagg 1943
>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence Length = 165179 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 aaattgtaaatgctgccagg 181 |||||||||||||||||||| Sbjct: 21739 aaattgtaaatgctgccagg 21758
>gb|AY223380.1| Schistosoma japonicum clone ZZZ251 mRNA sequence Length = 1361 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 9 gcctcgtgccgaa-tcggcacgaggctt 35 ||||||||||||| |||||||||||||| Sbjct: 213 gcctcgtgccgaattcggcacgaggctt 186
>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence Length = 195918 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 acatctccccagaggtgattcaga 395 |||||||||||||||||| ||||| Sbjct: 170750 acatctccccagaggtgactcaga 170727
>gb|AC166997.1| Mus musculus BAC clone RP23-107H9 from chromosome 14, complete sequence Length = 201316 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 acagctcaagcagcaggcag 368 |||||||||||||||||||| Sbjct: 30267 acagctcaagcagcaggcag 30248
>gb|BC006261.1| Homo sapiens cDNA clone IMAGE:3947934, **** WARNING: chimeric clone **** Length = 3182 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 6 gaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||| ||||||||||| Sbjct: 1904 gaggcctcgtgccgaattcggcacgagg 1877
>emb|AL391825.15| Human DNA sequence from clone RP11-456P18 on chromosome 1 Contains the 3' end of the ATF6 gene for activating transcription factor 6, a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)(PSME1) pseudogene, the 3' end of a novel gene (DKFZP586L151) and a CpG island, complete sequence Length = 211662 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gatggaggctgatttccagagaaa 276 |||||||||||||| ||||||||| Sbjct: 30731 gatggaggctgattgccagagaaa 30708
>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence Length = 186890 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 140680 gcagatggaggctgatttcc 140699
>gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome 10, complete sequence Length = 196465 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 agaggcggagagagagatag 236 |||||||||||||||||||| Sbjct: 154900 agaggcggagagagagatag 154881
>gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosome 10, complete sequence Length = 182735 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 agaggcggagagagagatag 236 |||||||||||||||||||| Sbjct: 160522 agaggcggagagagagatag 160541
>gb|AC008802.7| Homo sapiens chromosome 5 clone CTD-2073O6, complete sequence Length = 92418 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 gctgtaattccttgttcttt 547 |||||||||||||||||||| Sbjct: 17864 gctgtaattccttgttcttt 17845
>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete sequence Length = 238589 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 taaaggttgatgagtcggcc 447 |||||||||||||||||||| Sbjct: 232829 taaaggttgatgagtcggcc 232848
>gb|AC106727.5| Homo sapiens 3q BAC RP11-534K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153692 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gagagagagatagctgagta 243 |||||||||||||||||||| Sbjct: 20110 gagagagagatagctgagta 20091
>gb|AC023538.7| Homo sapiens chromosome 8, clone RP11-510I21, complete sequence Length = 189543 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gagagagagatagctgagta 243 |||||||||||||||||||| Sbjct: 133588 gagagagagatagctgagta 133607
>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence Length = 148807 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 68419 gcagatggaggctgatttcc 68400
>gb|AC160052.2| Mus musculus BAC clone RP24-173L14 from chromosome 9, complete sequence Length = 154436 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 acatctccccagaggtgattcaga 395 |||||||||||||||||| ||||| Sbjct: 122971 acatctccccagaggtgactcaga 122994
>emb|AL117152.1|CNS01DQG Botrytis cinerea strain T4 cDNA library Length = 722 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 8 ggcctcgtgccgaa-tcggcacgaggct 34 |||||||||||||| ||||||||||||| Sbjct: 209 ggcctcgtgccgaattcggcacgaggct 182
>gb|AC141272.3| Homo sapiens chromosome 16 clone RP11-1415K9, complete sequence Length = 185187 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 54778 gcagatggaggctgatttcc 54797
>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence Length = 173206 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 80391 gcagatggaggctgatttcc 80410
>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187215 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 aggaaagcaaaagaagaggc 222 |||||||||||||||||||| Sbjct: 156263 aggaaagcaaaagaagaggc 156282
>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 151083 gcagatggaggctgatttcc 151102
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 cgtgcgcagatggaggctgatttc 268 ||||||||||| |||||||||||| Sbjct: 20700 cgtgcgcagatcgaggctgatttc 20723
>emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidial w-3 fatty acid desaturase (fad3 gene) Length = 2248 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcgtgccgaatcggcacgag 31 |||||||||||||||||||| Sbjct: 62 tcgtgccgaatcggcacgag 81
>emb|AJ438591.1|MCR438591 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit G (vha-G gene) Length = 587 Score = 40.1 bits (20), Expect = 8.1 Identities = 131/168 (77%) Strand = Plus / Plus Query: 184 tgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagta 243 |||||| ||||| || || ||| |||||||||||||||| || | ||||| ||||| | Sbjct: 130 tgctaagacggccagactaaggcaagcaaaagaagaggctgaaaaggagattgctgaatt 189 Query: 244 ccgtgcgcagatggaggctgatttccagagaaagctcaccgagaccagcggtgactctgg 303 |||||| || ||||| || ||| ||||||| ||| | |||| | ||| ||||| || Sbjct: 190 ccgtgcccaaatggaagccgatcatcagagaaggcttgcagagagtaccggagactcagg 249 Query: 304 tgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaaca 351 ||| ||||| || |||||||| ||||| || || | ||||||||||| Sbjct: 250 tgctaatgtgaagcgccttgaacaagaaaccaatgctaaaattgaaca 297
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 423254 gcagatggaggctgatttcc 423273 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 240991 gcagatggaggctgatttcc 241010
>gb|AY610374.1| Sus scrofa clone reje37b_g23.y1.abd, mRNA sequence Length = 668 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 6 gaggcctcgtgccgaa-tcggcacgagg 32 |||||||||||||||| ||||||||||| Sbjct: 559 gaggcctcgtgccgaattcggcacgagg 532
>gb|AC005337.1|AC005337 Homo sapiens chromosome 19, cosmid R25269, complete sequence Length = 43581 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 aggcttaggaaagcaaaaga 216 |||||||||||||||||||| Sbjct: 14524 aggcttaggaaagcaaaaga 14505
>gb|CP000165.1| Drosophila melanogaster genomic scaffold 211000022278591 Length = 119078 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aaggcttaggaaagcaaaag 215 |||||||||||||||||||| Sbjct: 6302 aaggcttaggaaagcaaaag 6321
>gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complete sequence Length = 192911 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 aaattgtaaatgctgccagg 181 |||||||||||||||||||| Sbjct: 189609 aaattgtaaatgctgccagg 189590
>emb|AL355432.7|HS56F10 Homo sapiens chromosome 9 BAC RP11-56F10, complete sequence Length = 188491 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atctgtttatttctttggga 495 |||||||||||||||||||| Sbjct: 52392 atctgtttatttctttggga 52373
>emb|AL355433.6|HS179D22 Homo sapiens chromosome 9 BAC RP11-179D22, complete sequence Length = 177219 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atctgtttatttctttggga 495 |||||||||||||||||||| Sbjct: 138176 atctgtttatttctttggga 138157
>gb|M99679.1|HUMIGH353X Human immunoglobulin heavy chain variable region V3-53 (IGHV@) gene, exons 1-2 Length = 724 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 608 gcagatggaggctgatttcc 627
>dbj|AB019439.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 3 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 23254 gcagatggaggctgatttcc 23273
>dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 2 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagatggaggctgatttcc 269 |||||||||||||||||||| Sbjct: 40991 gcagatggaggctgatttcc 41010 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,284,494 Number of Sequences: 3902068 Number of extensions: 6284494 Number of successful extensions: 146074 Number of sequences better than 10.0: 188 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 145568 Number of HSP's gapped (non-prelim): 508 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)