ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7i03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476078.1| Oryza sativa (japonica cultivar-group), predic... 228 7e-57
2dbj|D10860.1|RICORFB Oryza sativa (japonica cultivar-group) mRNA... 172 4e-40
3gb|AY574280.1| Cynodon dactylon putative Der1-like family protei... 123 3e-25
4emb|AJ251622.1|ZMA251622 Zea mays mRNA for putative NADH oxidore... 123 3e-25
5gb|AY854013.1| Zea mays derlin1-1 mRNA, complete cds 123 3e-25
6gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 115 7e-23
7gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome... 115 7e-23
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 115 7e-23
9gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 115 7e-23
10gb|AY854014.1| Zea mays derlin1-2 mRNA, complete cds 109 5e-21
11gb|AY109493.1| Zea mays CL1200_1 mRNA sequence 98 2e-17
12gb|AY854017.1| Zea mays derlin1-1 gene, complete cds 94 3e-16
13gb|AY854018.1| Zea mays derlin1-2 gene, complete cds 72 1e-09
14ref|NM_119078.3| Arabidopsis thaliana unknown protein AT4G29330 ... 66 6e-08
15gb|AY096457.1| Arabidopsis thaliana unknown protein (At4g29330) ... 66 6e-08
16gb|AY063817.1| Arabidopsis thaliana unknown protein (At4g29330) ... 66 6e-08
17emb|BX826348.1|CNS0A38I Arabidopsis thaliana Full-length cDNA Co... 66 6e-08
18emb|BX841558.1|CNS09YFE Arabidopsis thaliana Full-length cDNA Co... 66 6e-08
19emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 44 0.22
20emb|AJ421478.1| Mus musculus X-inactivation center region; segme... 42 0.88
21emb|AL671187.9| Mouse DNA sequence from clone RP23-273N4 on chro... 42 0.88
22ref|XM_868621.1| PREDICTED: Bos taurus similar to acetyl-Coenzym... 40 3.5
23gb|AY237919.1| Homo sapiens acetyl-CoA carboxylase alpha (ACACA)... 40 3.5
24ref|XM_862501.1| PREDICTED: Canis familiaris similar to acetyl-c... 40 3.5
25ref|XM_548250.2| PREDICTED: Canis familiaris similar to acetyl-c... 40 3.5
26ref|XM_862483.1| PREDICTED: Canis familiaris similar to acetyl-c... 40 3.5
27ref|XM_862473.1| PREDICTED: Canis familiaris similar to acetyl-c... 40 3.5
28ref|XM_862461.1| PREDICTED: Canis familiaris similar to acetyl-c... 40 3.5
29ref|XM_862451.1| PREDICTED: Canis familiaris similar to acetyl-c... 40 3.5
30ref|XM_862443.1| PREDICTED: Canis familiaris similar to acetyl-c... 40 3.5
31ref|NM_198839.1| Homo sapiens acetyl-Coenzyme A carboxylase alph... 40 3.5
32ref|NM_198836.1| Homo sapiens acetyl-Coenzyme A carboxylase alph... 40 3.5
33ref|NM_198834.1| Homo sapiens acetyl-Coenzyme A carboxylase alph... 40 3.5
34gb|AY315627.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA... 40 3.5
35gb|AY315626.1| Homo sapiens acetyl-CoA carboxylase 1 truncated i... 40 3.5
36gb|AY315625.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA... 40 3.5
37gb|AY315623.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA... 40 3.5
38gb|AY315622.1| Homo sapiens acetyl-CoA carboxylase 1 truncated i... 40 3.5
39gb|AY315621.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA... 40 3.5
40emb|X80045.1|OAACOAC O.aries mRNA for acetyl-CoA carboxylase 40 3.5
41emb|AJ132890.1|BTA132890 Bos taurus mRNA for acetyl-CoA-carboxylase 40 3.5
42emb|AJ564445.1|OAR564445 Ovis aries partial mRNA for acetyl-CoA ... 40 3.5
43emb|AJ564444.1|HSA564444 Homo sapiens partial mRNA for acetyl-Co... 40 3.5
44gb|AC068447.16| Homo sapiens chromosome 17, clone RP11-451O3, co... 40 3.5
45gb|AC068400.10| Homo sapiens chromosome 17, clone RP11-378E13, c... 40 3.5
46ref|NM_174224.2| Bos taurus acetyl-coenzyme A carboxylase alpha ... 40 3.5
47ref|NM_001009256.1| Ovis aries acetyl-CoA carboxylase (ACC), mRNA 40 3.5
48gb|U19822.1|HSU19822 Human acetyl-CoA carboxylase mRNA, complete... 40 3.5
49emb|X68968.1|HSACOAC H.sapiens mRNA for acetyl-CoA carboxylase 40 3.5 
>ref|XM_476078.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 933

 Score =  228 bits (115), Expect = 7e-57
 Identities = 228/269 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
           |||||||||||||||||||| || |||||||| |||||| |||| || |||   ||||||
Sbjct: 34  ccaccaataagcaaggcatatggaacattgtgtttctttgccactgtactgtgccagctc 93

                                                                       
Query: 61  cagatactaaacccangccttcttattttatcttatncccatgngtncaagagntttcag 120
           |||||||| || |||    |||||   ||||  ||| ||  || || |||||  ||||||
Sbjct: 94  cagatactgaatccaccttttcttgccttatactatccctttgtgttcaagaaatttcag 153

                                                                       
Query: 121 atatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttggaatt 180
           |||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 154 atatggaggctatttacaagcttctttttcctgggcaagttttctatcaactttgggatt 213

                                                                       
Query: 181 cgccttctcatgatagcaagatatggngtgcagttggagaagggttcatttgagaagcgg 240
           |||||||| |||||||||||||| || |||||||| || |||||| ||||||| ||||| 
Sbjct: 214 cgccttctgatgatagcaagatacggcgtgcagttagaaaagggtgcatttgaaaagcgc 273

                                        
Query: 241 acagcagattncttgtggatgatgatatt 269
           ||||| |||| ||||||||||||||||||
Sbjct: 274 acagctgatttcttgtggatgatgatatt 302
to top
>dbj|D10860.1|RICORFB Oryza sativa (japonica cultivar-group) mRNA for chilling tolerance
           related protein, complete cds, clone:pBC442
          Length = 754

 Score =  172 bits (87), Expect = 4e-40
 Identities = 133/148 (89%), Gaps = 1/148 (0%)
 Strand = Plus / Plus

                                                                       
Query: 115 tttcagatatggaggctattnacaagcttctttttcctgggcaagttctccatcaacttt 174
           |||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 58  tttcagatatggaggctatttacaagcttctttttcctgggcaagttttctatcaacttt 117

                                                                       
Query: 175 ggaattcgccttctcatgatagcaagatatggngtgcagttggagaagggttcatttgag 234
           || ||||||||||| ||||||| |||||| || |||||||| || |||||| ||||||| 
Sbjct: 118 gggattcgccttctgatgatag-aagatacggcgtgcagttagaaaagggtgcatttgaa 176

                                       
Query: 235 aagcggacagcagattncttgtggatga 262
           ||||| ||||| |||| |||||||||||
Sbjct: 177 aagcgcacagctgatttcttgtggatga 204
to top
>gb|AY574280.1| Cynodon dactylon putative Der1-like family protein mRNA, complete
           cds
          Length = 1049

 Score =  123 bits (62), Expect = 3e-25
 Identities = 131/155 (84%)
 Strand = Plus / Plus

                                                                       
Query: 115 tttcagatatggaggctattnacaagcttctttttcctgggcaagttctccatcaacttt 174
           |||||||||||||||||||| ||||  ||| |||  |||||    || ||||| ||||||
Sbjct: 227 tttcagatatggaggctatttacaactttcatttgtctgggtggtttttccatgaacttt 286

                                                                       
Query: 175 ggaattcgccttctcatgatagcaagatatggngtgcagttggagaagggttcatttgag 234
           || ||||||||||| ||||||||||| ||||| ||||||||||| ||||||  |||||| 
Sbjct: 287 ggcattcgccttctgatgatagcaaggtatggtgtgcagttggaaaagggtgtatttgaa 346

                                              
Query: 235 aagcggacagcagattncttgtggatgatgatatt 269
           | |||||| ||||| | ||||||||||||||||||
Sbjct: 347 aggcggactgcagacttcttgtggatgatgatatt 381



 Score = 42.1 bits (21), Expect = 0.88
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 1   ccaccaataagcaaggcatangggacattgtg 32
           ||||| |||||||||||||  |||||||||||
Sbjct: 113 ccacctataagcaaggcatttgggacattgtg 144
to top
>emb|AJ251622.1|ZMA251622 Zea mays mRNA for putative NADH oxidoreductase (sor gene)
          Length = 1044

 Score =  123 bits (62), Expect = 3e-25
 Identities = 128/151 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 agatatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttggaa 178
           |||||||||||||||| ||||| |||||||||||||     || ||||| || ||||| |
Sbjct: 227 agatatggaggctattgacaagtttctttttcctggcaccattttccatgaaatttggta 286

                                                                       
Query: 179 ttcgccttctcatgatagcaagatatggngtgcagttggagaagggttcatttgagaagc 238
           |||||||||| ||||||||||| ||||| ||   |||||| |||||| ||||||| ||||
Sbjct: 287 ttcgccttctgatgatagcaaggtatggtgtcatgttggaaaagggtgcatttgataagc 346

                                          
Query: 239 ggacagcagattncttgtggatgatgatatt 269
           |||| ||||||| ||| ||||||||||||||
Sbjct: 347 ggactgcagatttcttatggatgatgatatt 377



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
           ||||| |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 109 ccacctataagcaaggcatatgggacattgtgtttctttaccaccgtgctagttcagctc 168

                
Query: 61  cagat 65
           |||||
Sbjct: 169 cagat 173
to top
>gb|AY854013.1| Zea mays derlin1-1 mRNA, complete cds
          Length = 1074

 Score =  123 bits (62), Expect = 3e-25
 Identities = 128/151 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 agatatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttggaa 178
           |||||||||||||||| ||||| |||||||||||||     || ||||| || ||||| |
Sbjct: 231 agatatggaggctattgacaagtttctttttcctggcaccattttccatgaaatttggta 290

                                                                       
Query: 179 ttcgccttctcatgatagcaagatatggngtgcagttggagaagggttcatttgagaagc 238
           |||||||||| ||||||||||| ||||| ||   |||||| |||||| ||||||| ||||
Sbjct: 291 ttcgccttctgatgatagcaaggtatggtgtcatgttggaaaagggtgcatttgataagc 350

                                          
Query: 239 ggacagcagattncttgtggatgatgatatt 269
           |||| ||||||| ||| ||||||||||||||
Sbjct: 351 ggactgcagatttcttatggatgatgatatt 381



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
           ||||| |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 113 ccacctataagcaaggcatatgggacattgtgtttctttaccaccgtgctagttcagctc 172

                
Query: 61  cagat 65
           |||||
Sbjct: 173 cagat 177
to top
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score =  115 bits (58), Expect = 7e-23
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                         
Query: 118   cagatatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttgga 177
             ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 26043 cagatatggaggctatttacaagcttctttttcctgggcaagttttctatcaactttggg 25984

                              
Query: 178   attcgccttctcatgat 194
             ||||||||||| |||||
Sbjct: 25983 attcgccttctgatgat 25967



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 195   agcaagatatggngtgcagttggagaagggttcatttgagaagcggacagcagattnctt 254
             ||||||||| || |||||||| || |||||| ||||||| ||||| ||||| |||| |||
Sbjct: 25863 agcaagatacggcgtgcagttagaaaagggtgcatttgaaaagcgcacagctgatttctt 25804

                            
Query: 255   gtggatgatgatatt 269
             |||||||||||||||
Sbjct: 25803 gtggatgatgatatt 25789



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1     ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
             |||||||||||||||||||| || |||||||| |||||| |||| || |||   ||||||
Sbjct: 26509 ccaccaataagcaaggcatatggaacattgtgtttctttgccactgtactgtgccagctc 26450

                     
Query: 61    cagatact 68
             ||||||||
Sbjct: 26449 cagatact 26442
to top
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score =  115 bits (58), Expect = 7e-23
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                         
Query: 118   cagatatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttgga 177
             ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 24883 cagatatggaggctatttacaagcttctttttcctgggcaagttttctatcaactttggg 24824

                              
Query: 178   attcgccttctcatgat 194
             ||||||||||| |||||
Sbjct: 24823 attcgccttctgatgat 24807



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 195   agcaagatatggngtgcagttggagaagggttcatttgagaagcggacagcagattnctt 254
             ||||||||| || |||||||| || |||||| ||||||| ||||| ||||| |||| |||
Sbjct: 24703 agcaagatacggcgtgcagttagaaaagggtgcatttgaaaagcgcacagctgatttctt 24644

                            
Query: 255   gtggatgatgatatt 269
             |||||||||||||||
Sbjct: 24643 gtggatgatgatatt 24629



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1     ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
             |||||||||||||||||||| || |||||||| |||||| |||| || |||   ||||||
Sbjct: 25349 ccaccaataagcaaggcatatggaacattgtgtttctttgccactgtactgtgccagctc 25290

                     
Query: 61    cagatact 68
             ||||||||
Sbjct: 25289 cagatact 25282
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  115 bits (58), Expect = 7e-23
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                           
Query: 118     cagatatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttgga 177
               ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 5339369 cagatatggaggctatttacaagcttctttttcctgggcaagttttctatcaactttggg 5339310

                                
Query: 178     attcgccttctcatgat 194
               ||||||||||| |||||
Sbjct: 5339309 attcgccttctgatgat 5339293



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                           
Query: 195     agcaagatatggngtgcagttggagaagggttcatttgagaagcggacagcagattnctt 254
               ||||||||| || |||||||| || |||||| ||||||| ||||| ||||| |||| |||
Sbjct: 5339189 agcaagatacggcgtgcagttagaaaagggtgcatttgaaaagcgcacagctgatttctt 5339130

                              
Query: 255     gtggatgatgatatt 269
               |||||||||||||||
Sbjct: 5339129 gtggatgatgatatt 5339115



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                           
Query: 1       ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
               |||||||||||||||||||| || |||||||| |||||| |||| || |||   ||||||
Sbjct: 5339835 ccaccaataagcaaggcatatggaacattgtgtttctttgccactgtactgtgccagctc 5339776

                       
Query: 61      cagatact 68
               ||||||||
Sbjct: 5339775 cagatact 5339768
to top
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score =  115 bits (58), Expect = 7e-23
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                         
Query: 118   cagatatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttgga 177
             ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 76070 cagatatggaggctatttacaagcttctttttcctgggcaagttttctatcaactttggg 76011

                              
Query: 178   attcgccttctcatgat 194
             ||||||||||| |||||
Sbjct: 76010 attcgccttctgatgat 75994



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 195   agcaagatatggngtgcagttggagaagggttcatttgagaagcggacagcagattnctt 254
             ||||||||| || |||||||| || |||||| ||||||| ||||| ||||| |||| |||
Sbjct: 75890 agcaagatacggcgtgcagttagaaaagggtgcatttgaaaagcgcacagctgatttctt 75831

                            
Query: 255   gtggatgatgatatt 269
             |||||||||||||||
Sbjct: 75830 gtggatgatgatatt 75816



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1     ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
             |||||||||||||||||||| || |||||||| |||||| |||| || |||   ||||||
Sbjct: 76536 ccaccaataagcaaggcatatggaacattgtgtttctttgccactgtactgtgccagctc 76477

                     
Query: 61    cagatact 68
             ||||||||
Sbjct: 76476 cagatact 76469
to top
>gb|AY854014.1| Zea mays derlin1-2 mRNA, complete cds
          Length = 1029

 Score =  109 bits (55), Expect = 5e-21
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                       
Query: 122 tatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttggaattc 181
           |||||||| |||| ||||| ||||| ||||||||    || ||||| |||||||| ||||
Sbjct: 252 tatggaggatatttacaagtttcttcttcctgggaccattttccataaactttggtattc 311

                                                                       
Query: 182 gccttctcatgatagcaagatatggngtgcagttggagaagggttcatttgagaagcgga 241
           ||||||| ||||||||||| ||||| ||   |||||| |||||  ||||||| || ||||
Sbjct: 312 gccttctgatgatagcaaggtatggtgtcatgttggaaaagggagcatttgataaacgga 371

                                       
Query: 242 cagcagattncttgtggatgatgatatt 269
           | ||||||| ||||||||||||||||||
Sbjct: 372 ctgcagatttcttgtggatgatgatatt 399



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
           ||||| |||||||||||||| ||||||||||| ||||| ||||| ||||| |||| ||||
Sbjct: 131 ccacctataagcaaggcatatgggacattgtgtttcttcaccactgtgctagttcggctc 190

             
Query: 61  ca 62
           ||
Sbjct: 191 ca 192
to top
>gb|AY109493.1| Zea mays CL1200_1 mRNA sequence
          Length = 1044

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                       
Query: 163 tccatcaactttggaattcgccttctcatgatagcaagatatggngtgcagttggagaag 222
           ||||| || ||||| ||||||||||| ||||||||||| ||||| ||   |||||| |||
Sbjct: 271 tccatgaaatttggtattcgccttctgatgatagcaaggtatggtgtcatgttggaaaag 330

                                                          
Query: 223 ggttcatttgagaagcggacagcagattncttgtggatgatgatatt 269
           ||| ||||||| |||||||| ||||||| ||| ||||||||||||||
Sbjct: 331 ggtgcatttgataagcggactgcagatttcttatggatgatgatatt 377



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
           ||||| |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 109 ccacctataagcaaggcatatgggacattgtgtttctttaccaccgtgctagttcagctc 168

                
Query: 61  cagat 65
           |||||
Sbjct: 169 cagat 173
to top
>gb|AY854017.1| Zea mays derlin1-1 gene, complete cds
          Length = 4987

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
            ||||| |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 2396 ccacctataagcaaggcatatgggacattgtgtttctttaccaccgtgctagttcagctc 2455

                 
Query: 61   cagat 65
            |||||
Sbjct: 2456 cagat 2460



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 213  gttggagaagggttcatttgagaagcggacagcagattncttgtggatgatgatatt 269
            |||||| |||||| ||||||| |||||||| ||||||| ||| ||||||||||||||
Sbjct: 3506 gttggaaaagggtgcatttgataagcggactgcagatttcttatggatgatgatatt 3562



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 118  cagatatggaggctattnacaagcttctttttcctgg 154
            ||||||||||||||||| ||||| |||||||||||||
Sbjct: 3297 cagatatggaggctattgacaagtttctttttcctgg 3333
to top
>gb|AY854018.1| Zea mays derlin1-2 gene, complete cds
          Length = 7166

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    ccaccaataagcaaggcatangggacattgtgnttctttaccacagtgctggttcagctc 60
            ||||| |||||||||||||| ||||||||||| ||||| ||||| ||||| |||| ||||
Sbjct: 2616 ccacctataagcaaggcatatgggacattgtgtttcttcaccactgtgctagttcggctc 2675

              
Query: 61   ca 62
            ||
Sbjct: 2676 ca 2677



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                     
Query: 213  gttggagaagggttcatttgagaagcggacagcagattncttgtggatgatgatatt 269
            |||||| |||||  ||||||| || ||||| ||||||| ||||||||||||||||||
Sbjct: 3386 gttggaaaagggagcatttgataaacggactgcagatttcttgtggatgatgatatt 3442



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                        
Query: 122  tatggaggctattnacaagcttctttttcctgggcaagttctccatcaactttggaattc 181
            |||||||| |||| ||||| ||||| ||||||||    || ||||| |||||||| ||||
Sbjct: 3194 tatggaggatatttacaagtttcttcttcctgggaccattttccataaactttggtattc 3253

                         
Query: 182  gccttctcatgat 194
            ||||||| |||||
Sbjct: 3254 gccttctgatgat 3266
to top
>ref|NM_119078.3| Arabidopsis thaliana unknown protein AT4G29330 mRNA, complete cds
          Length = 1079

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctccatcaactttggaattcgccttctcatgatagcaagatatggngtgcagttggag 219
           ||||| ||||| |||||||| || ||| | ||||||||||||||||| || ||  | |||
Sbjct: 308 ttctctatcaattttggaatacgtcttttgatgatagcaagatatggagttcaactcgag 367

                                                          
Query: 220 aagggttcatttgagaagcggacagcagattncttgtggatgatgat 266
           || ||  ||||||| | |||||||||||| |  ||||||||||||||
Sbjct: 368 aaagggccatttgaaaggcggacagcagactttttgtggatgatgat 414
to top
>gb|AY096457.1| Arabidopsis thaliana unknown protein (At4g29330) mRNA, complete cds
          Length = 832

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctccatcaactttggaattcgccttctcatgatagcaagatatggngtgcagttggag 219
           ||||| ||||| |||||||| || ||| | ||||||||||||||||| || ||  | |||
Sbjct: 193 ttctctatcaattttggaatacgtcttttgatgatagcaagatatggagttcaactcgag 252

                                                          
Query: 220 aagggttcatttgagaagcggacagcagattncttgtggatgatgat 266
           || ||  ||||||| | |||||||||||| |  ||||||||||||||
Sbjct: 253 aaagggccatttgaaaggcggacagcagactttttgtggatgatgat 299
to top
>gb|AY063817.1| Arabidopsis thaliana unknown protein (At4g29330) mRNA, complete cds
          Length = 1095

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctccatcaactttggaattcgccttctcatgatagcaagatatggngtgcagttggag 219
           ||||| ||||| |||||||| || ||| | ||||||||||||||||| || ||  | |||
Sbjct: 310 ttctctatcaattttggaatacgtcttttgatgatagcaagatatggagttcaactcgag 369

                                                          
Query: 220 aagggttcatttgagaagcggacagcagattncttgtggatgatgat 266
           || ||  ||||||| | |||||||||||| |  ||||||||||||||
Sbjct: 370 aaagggccatttgaaaggcggacagcagactttttgtggatgatgat 416
to top
>emb|BX826348.1|CNS0A38I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB18ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 962

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 ttctccatcaactttggaattcgccttctcatgatagcaagatatggngtgcagttggag 219
           ||||| ||||| |||||||| || ||| | ||||||||||||||||| || ||  | |||
Sbjct: 249 ttctctatcaattttggaatacgtcttttgatgatagcaagatatggagttcaactcgag 308

                                                          
Query: 220 aagggttcatttgagaagcggacagcagattncttgtggatgatgat 266
           || ||  ||||||| | |||||||||||| |  ||||||||||||||
Sbjct: 309 aaagggccatttgaaaggcggacagcagactttttgtggatgatgat 355
to top
>emb|BX841558.1|CNS09YFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH46ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1024

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 160 ttctccatcaactttggaattcgccttctcatgatagcaagatatggngtgcagttggag 219
           ||||| ||||| |||||||| || ||| | ||||||||||||||||| || ||  | |||
Sbjct: 740 ttctctatcaattttggaatacgtcttttgatgatagcaagatatggagttcaactcgag 681

                                                          
Query: 220 aagggttcatttgagaagcggacagcagattncttgtggatgatgat 266
           || ||  ||||||| | |||||||||||| |  ||||||||||||||
Sbjct: 680 aaagggccatttgaaaggcggacagcagactttttgtggatgatgat 634
to top
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                          
Query: 195    agcaagatatggngtgcagttggagaagggttcatttgagaagcggacagcagattnctt 254
              |||||||||||| || ||  | ||||| ||  ||||||| | |||||||||||| |  ||
Sbjct: 174034 agcaagatatggagttcaactcgagaaagggccatttgaaaggcggacagcagacttttt 174093

                          
Query: 255    gtggatgatgat 266
              ||||||||||||
Sbjct: 174094 gtggatgatgat 174105
to top
>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3
          Length = 247850

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   acaagcttctttttcctgggc 156
             |||||||||||||||||||||
Sbjct: 26150 acaagcttctttttcctgggc 26130
to top
>emb|AL671187.9| Mouse DNA sequence from clone RP23-273N4 on chromosome X, complete
              sequence
          Length = 205749

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 136    acaagcttctttttcctgggc 156
              |||||||||||||||||||||
Sbjct: 144746 acaagcttctttttcctgggc 144766
to top
>ref|XM_868621.1| PREDICTED: Bos taurus similar to acetyl-Coenzyme A carboxylase
           alpha isoform 1 (LOC616571), mRNA
          Length = 765

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 583 agtgctggttcagctccaga 564
to top
>gb|AY237919.1| Homo sapiens acetyl-CoA carboxylase alpha (ACACA) mRNA, complete
          cds
          Length = 7041

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|XM_862501.1| PREDICTED: Canis familiaris similar to acetyl-coenzyme A
          carboxylase alpha, transcript variant 10 (LOC491130),
          mRNA
          Length = 8357

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|XM_548250.2| PREDICTED: Canis familiaris similar to acetyl-coenzyme A
          carboxylase alpha, transcript variant 1 (LOC491130),
          mRNA
          Length = 8357

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|XM_862483.1| PREDICTED: Canis familiaris similar to acetyl-coenzyme A
          carboxylase alpha, transcript variant 9 (LOC491130),
          mRNA
          Length = 8357

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|XM_862473.1| PREDICTED: Canis familiaris similar to acetyl-coenzyme A
          carboxylase alpha, transcript variant 8 (LOC491130),
          mRNA
          Length = 8387

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|XM_862461.1| PREDICTED: Canis familiaris similar to acetyl-coenzyme A
          carboxylase alpha, transcript variant 7 (LOC491130),
          mRNA
          Length = 8336

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|XM_862451.1| PREDICTED: Canis familiaris similar to acetyl-coenzyme A
          carboxylase alpha, transcript variant 6 (LOC491130),
          mRNA
          Length = 8342

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|XM_862443.1| PREDICTED: Canis familiaris similar to acetyl-coenzyme A
          carboxylase alpha, transcript variant 5 (LOC491130),
          mRNA
          Length = 8339

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>ref|NM_198839.1| Homo sapiens acetyl-Coenzyme A carboxylase alpha (ACACA), transcript
            variant 2, mRNA
          Length = 10692

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   agtgctggttcagctccaga 64
            ||||||||||||||||||||
Sbjct: 1347 agtgctggttcagctccaga 1328
to top
>ref|NM_198836.1| Homo sapiens acetyl-Coenzyme A carboxylase alpha (ACACA),
           transcript variant 3, mRNA
          Length = 9585

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 240 agtgctggttcagctccaga 221
to top
>ref|NM_198834.1| Homo sapiens acetyl-Coenzyme A carboxylase alpha (ACACA),
           transcript variant 1, mRNA
          Length = 10018

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 673 agtgctggttcagctccaga 654
to top
>gb|AY315627.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA, complete cds;
          alternatively spliced
          Length = 7041

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>gb|AY315626.1| Homo sapiens acetyl-CoA carboxylase 1 truncated isoform (ACC1)
           mRNA, complete cds; alternatively spliced
          Length = 1064

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 642 agtgctggttcagctccaga 623
to top
>gb|AY315625.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA, partial cds;
           alternatively spliced
          Length = 953

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 642 agtgctggttcagctccaga 623
to top
>gb|AY315623.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA, partial cds;
            alternatively spliced
          Length = 1627

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   agtgctggttcagctccaga 64
            ||||||||||||||||||||
Sbjct: 1316 agtgctggttcagctccaga 1297
to top
>gb|AY315622.1| Homo sapiens acetyl-CoA carboxylase 1 truncated isoform (ACC1)
           mRNA, complete cds; alternatively spliced
          Length = 662

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 240 agtgctggttcagctccaga 221
to top
>gb|AY315621.1| Homo sapiens acetyl-CoA carboxylase 1 (ACC1) mRNA, partial cds;
           alternatively spliced
          Length = 551

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 240 agtgctggttcagctccaga 221
to top
>emb|X80045.1|OAACOAC O.aries mRNA for acetyl-CoA carboxylase
          Length = 9422

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 368 agtgctggttcagctccaga 349
to top
>emb|AJ132890.1|BTA132890 Bos taurus mRNA for acetyl-CoA-carboxylase
          Length = 7381

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 389 agtgctggttcagctccaga 370
to top
>emb|AJ564445.1|OAR564445 Ovis aries partial mRNA for acetyl-CoA carboxylase-alpha (ACACA
           gene), splice variant PIA
          Length = 328

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 207 agtgctggttcagctccaga 188
to top
>emb|AJ564444.1|HSA564444 Homo sapiens partial mRNA for acetyl-CoA carboxylase-alpha (ACACA
           gene), splice variant PI
          Length = 341

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 248 agtgctggttcagctccaga 229
to top
>gb|AC068447.16| Homo sapiens chromosome 17, clone RP11-451O3, complete sequence
          Length = 103056

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    agtgctggttcagctccaga 64
             ||||||||||||||||||||
Sbjct: 96856 agtgctggttcagctccaga 96837
to top
>gb|AC068400.10| Homo sapiens chromosome 17, clone RP11-378E13, complete sequence
          Length = 205588

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    agtgctggttcagctccaga 64
             ||||||||||||||||||||
Sbjct: 87027 agtgctggttcagctccaga 87008
to top
>ref|NM_174224.2| Bos taurus acetyl-coenzyme A carboxylase alpha [acetyl-coA
           carboxylase] (ACACA), mRNA
          Length = 7381

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 389 agtgctggttcagctccaga 370
to top
>ref|NM_001009256.1| Ovis aries acetyl-CoA carboxylase (ACC), mRNA
          Length = 9422

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  agtgctggttcagctccaga 64
           ||||||||||||||||||||
Sbjct: 368 agtgctggttcagctccaga 349
to top
>gb|U19822.1|HSU19822 Human acetyl-CoA carboxylase mRNA, complete cds
          Length = 7041

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30
to top
>emb|X68968.1|HSACOAC H.sapiens mRNA for acetyl-CoA carboxylase
          Length = 7020

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 agtgctggttcagctccaga 64
          ||||||||||||||||||||
Sbjct: 49 agtgctggttcagctccaga 30


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,975,938
Number of Sequences: 3902068
Number of extensions: 1975938
Number of successful extensions: 36653
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36566
Number of HSP's gapped (non-prelim): 86
length of query: 269
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 247
effective length of database: 17,147,199,772
effective search space: 4235358343684
effective search space used: 4235358343684
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top