| Clone Name | bags7i01 |
|---|---|
| Clone Library Name | barley_pub |
>tpg|BK005644.1| TPA: TPA_inf: Triticum aestivum histidine-containing phosphotransfer protein 2 (HP) mRNA, complete cds Length = 1212 Score = 494 bits (249), Expect = e-136 Identities = 280/289 (96%), Gaps = 1/289 (0%) Strand = Plus / Minus Query: 208 accttgaggtgcccacctacagtttcttggaagataacaagatgctcataggctaagagc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 accttgaggtgcccacctacagtttcttggaagataacaagatgctcataggctaagagc 291 Query: 268 ctaaagaccagtacctaccaacatatattctccacaggagtgaattcctgttgcgctgtt 327 ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 290 ctaaa-accagtacctaccgacatatattctcgacaggagtgaattcctgttgcgctgtt 232 Query: 328 attttgttctcaatgtggctaggagtttttgtttcaggactatcacaatggtgatccact 387 |||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 231 attttgttttcaatgtggctaggagtttttgtttcaggactatcgcaacggtgatccact 172 Query: 388 gttacctactgaagttcatttgcagtgcgaaataattgtttctcctatgttgctactgga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gttacctactgaagttcatttgcagtgcgaaataattgtttctcctatgttgctactgga 112 Query: 448 ttgtaagttactttgtactgattttctgagaccctatcggaaggatatt 496 ||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 111 ttgtaagttgttttatactgattttctgagaccctatcggaaggatatt 63
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 254 bits (128), Expect = 2e-64 Identities = 221/252 (87%) Strand = Plus / Plus Query: 18 tccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggctggtggtt 77 ||||||||||| || |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 19696015 tccctgcgccatccccagcaggacgcagagcgtgtgaagaacccagagtggctagtggtc 19696074 Query: 78 attggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggt 137 ||||| |||||||| || ||||||||||| || || ||||| ||||||| || || ||| Sbjct: 19696075 attggcgtctgcacccaccttggttgcattcctctccccaatgctggagatttcggaggt 19696134 Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 19696135 tggttctgcccgtgccatggctcccactacgacatctctggcaggattcgcaagggcccc 19696194 Query: 198 gccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaagatgctcata 257 || || | |||||| ||||| || ||||||||||||||||| || |||||| | |||||| Sbjct: 19696195 gctccattcaacctggaggtccctacctacagtttcttggaggagaacaagctcctcata 19696254 Query: 258 ggctaagagcct 269 |||||||||||| Sbjct: 19696255 ggctaagagcct 19696266
>dbj|AK059519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C04, full insert sequence Length = 1242 Score = 254 bits (128), Expect = 2e-64 Identities = 221/252 (87%) Strand = Plus / Plus Query: 18 tccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggctggtggtt 77 ||||||||||| || |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 721 tccctgcgccatccccagcaggacgcagagcgtgtgaagaacccagagtggctagtggtc 780 Query: 78 attggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggt 137 ||||| |||||||| || ||||||||||| || || ||||| ||||||| || || ||| Sbjct: 781 attggcgtctgcacccaccttggttgcattcctctccccaatgctggagatttcggaggt 840 Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 841 tggttctgcccgtgccatggctcccactacgacatctctggcaggattcgcaagggcccc 900 Query: 198 gccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaagatgctcata 257 || || | |||||| ||||| || ||||||||||||||||| || |||||| | |||||| Sbjct: 901 gctccattcaacctggaggtccctacctacagtttcttggaggagaacaagctcctcata 960 Query: 258 ggctaagagcct 269 |||||||||||| Sbjct: 961 ggctaagagcct 972
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 254 bits (128), Expect = 2e-64 Identities = 221/252 (87%) Strand = Plus / Plus Query: 18 tccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggctggtggtt 77 ||||||||||| || |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 146741 tccctgcgccatccccagcaggacgcagagcgtgtgaagaacccagagtggctagtggtc 146800 Query: 78 attggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggt 137 ||||| |||||||| || ||||||||||| || || ||||| ||||||| || || ||| Sbjct: 146801 attggcgtctgcacccaccttggttgcattcctctccccaatgctggagatttcggaggt 146860 Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 146861 tggttctgcccgtgccatggctcccactacgacatctctggcaggattcgcaagggcccc 146920 Query: 198 gccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaagatgctcata 257 || || | |||||| ||||| || ||||||||||||||||| || |||||| | |||||| Sbjct: 146921 gctccattcaacctggaggtccctacctacagtttcttggaggagaacaagctcctcata 146980 Query: 258 ggctaagagcct 269 |||||||||||| Sbjct: 146981 ggctaagagcct 146992
>ref|XM_472343.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 837 Score = 242 bits (122), Expect = 9e-61 Identities = 215/246 (87%) Strand = Plus / Plus Query: 18 tccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggctggtggtt 77 ||||||||||| || |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 592 tccctgcgccatccccagcaggacgcagagcgtgtgaagaacccagagtggctagtggtc 651 Query: 78 attggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggt 137 ||||| |||||||| || ||||||||||| || || ||||| ||||||| || || ||| Sbjct: 652 attggcgtctgcacccaccttggttgcattcctctccccaatgctggagatttcggaggt 711 Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 712 tggttctgcccgtgccatggctcccactacgacatctctggcaggattcgcaagggcccc 771 Query: 198 gccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaagatgctcata 257 || || | |||||| ||||| || ||||||||||||||||| || |||||| | |||||| Sbjct: 772 gctccattcaacctggaggtccctacctacagtttcttggaggagaacaagctcctcata 831 Query: 258 ggctaa 263 |||||| Sbjct: 832 ggctaa 837
>gb|BT018238.1| Zea mays clone EL01N0563B05.c mRNA sequence Length = 971 Score = 234 bits (118), Expect = 2e-58 Identities = 223/258 (86%) Strand = Plus / Plus Query: 10 atgttgcatccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggc 69 |||| ||||||||||||||||||||||| || || |||||||||||||| || ||||||| Sbjct: 533 atgtggcatccctgcgccacccagagcaggatgcagagcgtgtgaagaatcccgagtggc 592 Query: 70 tggtggttattggtgtctgcactcatcttggttgcatcccccttcccaactctggagact 129 ||||||| ||||| || |||||||| || || |||||||| || || ||| | ||||||| Sbjct: 593 tggtggtcattggcgtgtgcactcacctcggctgcatcccactaccgaacgccggagact 652 Query: 130 ttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgca 189 |||| || ||||||||||| |||||||| |||||||||||||| || || || ||||||| Sbjct: 653 ttggcggctggttctgcccatgccatggttcccactacgacatatccgggaggatccgca 712 Query: 190 agggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaaga 249 |||||||||| |||| |||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 713 agggccctgcgccgttcaacctcgaggtcccgacctacagtttcttggaggagaacaaac 772 Query: 250 tgctcataggctaagagc 267 |||||||||| ||||||| Sbjct: 773 tgctcataggttaagagc 790
>gb|BT017520.1| Zea mays clone EL01N0421A02.c mRNA sequence Length = 1172 Score = 230 bits (116), Expect = 4e-57 Identities = 221/256 (86%) Strand = Plus / Plus Query: 10 atgttgcatccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggc 69 |||| ||||||||||||||||||||||| || || ||||||||||||| || ||||||| Sbjct: 645 atgtggcatccctgcgccacccagagcaggatgcatagcgtgtgaagaatcccgagtggc 704 Query: 70 tggtggttattggtgtctgcactcatcttggttgcatcccccttcccaactctggagact 129 ||||||| ||||| || |||||||| || ||||||||||| || || ||| | ||||||| Sbjct: 705 tggtggtcattggcgtgtgcactcacctcggttgcatcccactaccgaacgccggagact 764 Query: 130 ttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgca 189 |||| || ||||||||||| |||||||| ||||||||| |||| || || || ||||||| Sbjct: 765 ttggcggctggttctgcccatgccatggttcccactactacatatccgggaggatccgca 824 Query: 190 agggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaaga 249 ||||||||||||||| |||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 825 agggccctgccccgttcaacctcgaggtcccgacctacagtttcttggaggagaacaaac 884 Query: 250 tgctcataggctaaga 265 |||||||||| ||||| Sbjct: 885 tgctcataggttaaga 900
>gb|AY109584.1| Zea mays CL2436_1 mRNA sequence Length = 1746 Score = 220 bits (111), Expect = 3e-54 Identities = 219/255 (85%) Strand = Plus / Plus Query: 10 atgttgcatccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggc 69 |||| ||||||||||||||||||||||| || || ||||||||||||||||| ||||||| Sbjct: 1185 atgtggcatccctgcgccacccagagcaggatgcagagcgtgtgaagaaccctgagtggc 1244 Query: 70 tggtggttattggtgtctgcactcatcttggttgcatcccccttcccaactctggagact 129 ||||||| ||||| || ||||| || || || |||||||| || || || | ||||||| Sbjct: 1245 tggtggtcattggcgtgtgcacgcacctcggctgcatcccactacctaatgccggagact 1304 Query: 130 ttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgca 189 |||| || ||||||||||| |||||||| |||||||| ||||| || || || ||||||| Sbjct: 1305 ttggcggctggttctgcccatgccatggttcccactatgacatttccgggaggatccgca 1364 Query: 190 agggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaaga 249 |||||||||| |||| |||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 1365 agggccctgcgccgttcaacctcgaggtccctacctacagtttcttggaggagaacaaac 1424 Query: 250 tgctcataggctaag 264 ||||||||||||||| Sbjct: 1425 tgctcataggctaag 1439
>gb|M77224.1|MZERFESPA Zea mays mitochondrial Rieske Fe-S protein mRNA, complete cds Length = 1197 Score = 218 bits (110), Expect = 1e-53 Identities = 221/258 (85%) Strand = Plus / Plus Query: 10 atgttgcatccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggc 69 |||| ||||||||||||||||||||||| || || ||||||||||||||||| ||||||| Sbjct: 676 atgtggcatccctgcgccacccagagcaggatgcagagcgtgtgaagaaccctgagtggc 735 Query: 70 tggtggttattggtgtctgcactcatcttggttgcatcccccttcccaactctggagact 129 ||||||| ||||| || ||||| || || || |||||||| || || || | ||||||| Sbjct: 736 tggtggtcattggcgtgtgcacgcacctcggctgcatcccactacctaatgccggagact 795 Query: 130 ttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgca 189 |||| || ||||||||||| |||||||| |||||||| ||||| || || || ||||||| Sbjct: 796 ttggcggctggttctgcccatgccatggttcccactatgacatttccgggaggatccgca 855 Query: 190 agggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaaga 249 |||||||||| |||| |||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 856 agggccctgcgccgttcaacctcgaggtccctacctacagtttcttggaggagaacaaac 915 Query: 250 tgctcataggctaagagc 267 ||||| |||||||||||| Sbjct: 916 tgctcgtaggctaagagc 933
>gb|AY105531.1| Zea mays PCO113958 mRNA sequence Length = 1217 Score = 188 bits (95), Expect = 1e-44 Identities = 209/247 (84%) Strand = Plus / Plus Query: 15 gcatccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggctggtg 74 |||||||| ||||||||||||||||| || ||||| || |||||||| || |||||||| Sbjct: 714 gcatccctccgccacccagagcaagatgcagagcgcgtcaagaaccccgaatggctggtc 773 Query: 75 gttattggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggt 134 || ||||| ||||||||||| || || |||||||| || || || | |||||||||||| Sbjct: 774 gtcattggggtctgcactcacctgggctgcatcccgctccctaatgcaggagactttggt 833 Query: 135 ggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggc 194 || ||||||||||||||||| ||||| ||||||||||| ||||| || |||||||||||| Sbjct: 834 ggctggttctgcccgtgccacggctcgcactacgacatttctggtaggatccgcaagggc 893 Query: 195 cctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaagatgctc 254 || || || | |||||| || ||||| || ||||| ||||||||||| |||||| | ||| Sbjct: 894 ccggcacccttcaacctggaagtgccgacatacagcttcttggaagagaacaagcttctc 953 Query: 255 ataggct 261 || |||| Sbjct: 954 atcggct 960
>gb|DQ207870.1| Solanum tuberosum clone 087E11 rieske iron-sulfur protein-like mRNA, complete cds Length = 1098 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgc 188 |||||||||||||| ||||| |||||||||||||| |||||||||||||| || || ||| Sbjct: 722 tttggtggttggttttgcccatgccatggctcccattacgacatctctggtaggattcgc 781 Query: 189 aagggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaag 248 || || || || ||||| || || |||||||| |||||||||||||||||||| |||||| Sbjct: 782 aaaggacccgcaccgtataatctggaggtgcctacctacagtttcttggaagagaacaag 841
>gb|BT014059.1| Lycopersicon esculentum clone 133157F, mRNA sequence Length = 1087 Score = 113 bits (57), Expect = 6e-22 Identities = 156/189 (82%) Strand = Plus / Plus Query: 60 ccagagtggctggtggttattggtgtctgcactcatcttggttgcatcccccttcccaac 119 ||||| ||||| |||||| |||| || || |||||||| || ||||| || | || || Sbjct: 665 ccagaatggcttgtggttgttggggtatgtactcatctagggtgcattcctttaccaaat 724 Query: 120 tctggagactttggtggttggttctgcccgtgccatggctcccactacgacatctctggc 179 |||| || |||||||||||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 725 gctggtgattttggtggttggttttgcccatgccatggctctcattacgacatctctggt 784 Query: 180 agaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaa 239 || || ||||| || || || ||||| || || |||||||| |||||||||||||||||| Sbjct: 785 aggattcgcaaaggacccgcaccgtataatctggaggtgcctacctacagtttcttggaa 844 Query: 240 gataacaag 248 || |||||| Sbjct: 845 gagaacaag 853
>emb|X79332.1|STFES1G S.tuberosum (Desiree) FeS1 mRNA for Rieske iron-sulfur protein Length = 993 Score = 111 bits (56), Expect = 2e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgc 188 |||||||||||||| ||||| |||||||||||||| |||||||||||||| || || ||| Sbjct: 685 tttggtggttggttttgcccatgccatggctcccattacgacatctctggtaggattcgc 744 Query: 189 aagggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaag 248 || || || || ||||| || || |||||||| ||||| |||||||||||||| |||||| Sbjct: 745 aaaggacccgcaccgtataatctggaggtgcctacctatagtttcttggaagagaacaag 804
>gb|M77225.1|TOBRFESP Nicotiana tabacum mitochondrial Rieske Fe-S protein mRNA, complete cds Length = 956 Score = 109 bits (55), Expect = 9e-21 Identities = 160/195 (82%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||||| ||||||||||| || ||||| |||||||| ||||| || | Sbjct: 568 aagaatccagaatggcttgtggttattggggtatgcacccatcttgggtgcattcctttg 627 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || |||||||||||||| ||||| ||||| |||||||| || |||||| Sbjct: 628 ccaaatgctggtgattttggtggttggttttgcccttgccacggctcccattatgacatc 687 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| || ||||||||||| ||||| || || || || |||||||| || || |||||| Sbjct: 688 tctggtaggatccgcaagggacctgcaccatataatctggaggtgcctacttatagtttc 747 Query: 234 ttggaagataacaag 248 |||| || |||||| Sbjct: 748 ctggaggagaacaag 762
>ref|XM_466001.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 |||||||| ||||||||||| || ||||| || || |||||||| || ||||| || ||| Sbjct: 700 aagaaccctgagtggctggttgtgattggggtgtgtactcatctgggctgcattccactt 759 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 |||||| |||| ||||||||||| |||||||| || |||||||| || || || || || Sbjct: 760 cccaacgctggtgactttggtggctggttctgtccatgccatggatcacattatgatata 819 Query: 174 tctggcagaatccgcaagggccctgccccgtacaacct 211 || || |||||||| ||||||||||| || |||||||| Sbjct: 820 tcaggtagaatccgtaagggccctgcaccatacaacct 857
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 |||||||| ||||||||||| || ||||| || || |||||||| || ||||| || ||| Sbjct: 19000800 aagaaccctgagtggctggttgtgattggggtgtgtactcatctgggctgcattccactt 19000741 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 |||||| |||| ||||||||||| |||||||| || |||||||| || || || || || Sbjct: 19000740 cccaacgctggtgactttggtggctggttctgtccatgccatggatcacattatgatata 19000681 Query: 174 tctggcagaatccgcaagggccctgccccgtacaacct 211 || || |||||||| ||||||||||| || |||||||| Sbjct: 19000680 tcaggtagaatccgtaagggccctgcaccatacaacct 19000643 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 attgtaagttactttgtactgatt 470 |||||||||||||||||| ||||| Sbjct: 18847892 attgtaagttactttgtattgatt 18847869
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 |||||||| ||||||||||| || ||||| || || |||||||| || ||||| || ||| Sbjct: 56121 aagaaccctgagtggctggttgtgattggggtgtgtactcatctgggctgcattccactt 56062 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 |||||| |||| ||||||||||| |||||||| || |||||||| || || || || || Sbjct: 56061 cccaacgctggtgactttggtggctggttctgtccatgccatggatcacattatgatata 56002 Query: 174 tctggcagaatccgcaagggccctgccccgtacaacct 211 || || |||||||| ||||||||||| || |||||||| Sbjct: 56001 tcaggtagaatccgtaagggccctgcaccatacaacct 55964
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 |||||||| ||||||||||| || ||||| || || |||||||| || ||||| || ||| Sbjct: 6321 aagaaccctgagtggctggttgtgattggggtgtgtactcatctgggctgcattccactt 6262 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 |||||| |||| ||||||||||| |||||||| || |||||||| || || || || || Sbjct: 6261 cccaacgctggtgactttggtggctggttctgtccatgccatggatcacattatgatata 6202 Query: 174 tctggcagaatccgcaagggccctgccccgtacaacct 211 || || |||||||| ||||||||||| || |||||||| Sbjct: 6201 tcaggtagaatccgtaagggccctgcaccatacaacct 6164
>dbj|AK102815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108M09, full insert sequence Length = 1157 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 |||||||| ||||||||||| || ||||| || || |||||||| || ||||| || ||| Sbjct: 700 aagaaccctgagtggctggttgtgattggggtgtgtactcatctgggctgcattccactt 759 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 |||||| |||| ||||||||||| |||||||| || |||||||| || || || || || Sbjct: 760 cccaacgctggtgactttggtggctggttctgtccatgccatggatcacattatgatata 819 Query: 174 tctggcagaatccgcaagggccctgccccgtacaacct 211 || || |||||||| ||||||||||| || |||||||| Sbjct: 820 tcaggtagaatccgtaagggccctgcaccatacaacct 857
>gb|L16813.1|TOBFESD Nicotiana tabacum clone 32.10 Rieske iron-sulfur protein mRNA, complete cds; mitochondrial Length = 1121 Score = 105 bits (53), Expect = 1e-19 Identities = 155/189 (82%) Strand = Plus / Plus Query: 60 ccagagtggctggtggttattggtgtctgcactcatcttggttgcatcccccttcccaac 119 ||||| ||||| |||||||| || || ||||||||||| || ||||| || | || || Sbjct: 703 ccagaatggcttgtggttatcggggtatgcactcatctagggtgcatacctttaccaaat 762 Query: 120 tctggagactttggtggttggttctgcccgtgccatggctcccactacgacatctctggc 179 |||| || |||||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 763 gctggtgattttggtggttggttttgcccatgccatggttcccactatgacatctctggt 822 Query: 180 agaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaa 239 || || ||||| || ||||| || || || || |||||||| |||||||||||| |||| Sbjct: 823 aggattcgcaaaggacctgcgccatataatctggaggtgcctacctacagtttcatggag 882 Query: 240 gataacaag 248 || |||||| Sbjct: 883 gagaacaag 891
>gb|L16812.1|TOBFESC Nicotiana tabacum clone 36.14 Rieske iron-sulfur protein mRNA, complete cds; mitochondrial Length = 1286 Score = 105 bits (53), Expect = 1e-19 Identities = 155/189 (82%) Strand = Plus / Plus Query: 60 ccagagtggctggtggttattggtgtctgcactcatcttggttgcatcccccttcccaac 119 ||||| ||||| ||||||||||| || ||||| |||||||| ||||| || | || || Sbjct: 826 ccagaatggcttgtggttattggggtatgcacccatcttgggtgcattcctttgccaaat 885 Query: 120 tctggagactttggtggttggttctgcccgtgccatggctcccactacgacatctctggc 179 | || || |||||||||||||| ||||| ||||| |||||||| || ||||||||||| Sbjct: 886 gccggtgattttggtggttggttttgcccttgccacggctcccattatgacatctctggt 945 Query: 180 agaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaa 239 || ||||||||||| ||||| || || || || |||||||| || || |||||| ||||| Sbjct: 946 aggatccgcaagggacctgcaccatataatctggaggtgcctacttatagtttcctggaa 1005 Query: 240 gataacaag 248 || |||||| Sbjct: 1006 gagaacaag 1014
>gb|L16810.1|TOBFESA Nicotiana tabacum clone 17.12 Rieske iron-sulfur protein mRNA, complete cds; mitochondrial Length = 1210 Score = 105 bits (53), Expect = 1e-19 Identities = 155/189 (82%) Strand = Plus / Plus Query: 60 ccagagtggctggtggttattggtgtctgcactcatcttggttgcatcccccttcccaac 119 ||||| ||||| ||||||||||| || ||||| |||||||| ||||| || | || || Sbjct: 766 ccagaatggcttgtggttattggggtatgcacccatcttgggtgcattcctttgccaaat 825 Query: 120 tctggagactttggtggttggttctgcccgtgccatggctcccactacgacatctctggc 179 | || || |||||||||||||| ||||| ||||| |||||||| || ||||||||||| Sbjct: 826 gccggtgattttggtggttggttttgcccttgccacggctcccattatgacatctctggt 885 Query: 180 agaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaa 239 || ||||||||||| ||||| || || || || |||||||| || || |||||| ||||| Sbjct: 886 aggatccgcaagggacctgcaccatataatctggaggtgcctacttatagtttcctggaa 945 Query: 240 gataacaag 248 || |||||| Sbjct: 946 gagaacaag 954
>gb|L16811.1|TOBFESB Nicotiana tabacum clone 8.8 Rieske iron-sulfur protein mRNA, complete cds; mitochondrial Length = 1202 Score = 103 bits (52), Expect = 6e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgc 188 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || || ||| Sbjct: 788 tttggtggttggttttgcccatgccatggctcccactatgacatctctggtaggattcgc 847 Query: 189 aagggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaagataacaag 248 || || ||||| || || || || |||||||| |||||||||||| |||| || |||||| Sbjct: 848 aaaggacctgcaccatataatctggaggtgcctacctacagtttcatggaggagaacaag 907
>dbj|D21116.1|RICSS126 Oryza sativa mRNA for Rieske Fe-S protein, partial sequence Length = 299 Score = 79.8 bits (40), Expect = 8e-12 Identities = 92/110 (83%) Strand = Plus / Plus Query: 18 tccctgcgccacccagagcaagacgctgagcgtgtgaagaacccagagtggctggtggtt 77 ||||||||||| | |||| ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 187 tccctgcgccattcccagcaggacgcagagcgtgtnaagaacccagagtggctagtggtc 246 Query: 78 attggtgtctgcactcatcttggttgcatcccccttcccaactctggaga 127 ||| | |||||||| || ||||||||||| || || ||||| ||||||| Sbjct: 247 attngcgtctgcacccaccttggttgcattcctctccccaatgctggaga 296
>emb|AJ719669.1| Gallus gallus mRNA for hypothetical protein, clone 5b19 Length = 1070 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 84 gtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttggttc 143 |||||||||||||||||||| | || || | ||||||||||| |||||||||| | | Sbjct: 702 gtctgcactcatcttggttgtgtaccaattgctaactctggagattttggtggttattac 761 Query: 144 tgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgccccg 203 ||||||||||| || ||||| || || ||||||||||||| | || || |||||||| Sbjct: 762 tgcccgtgccacgggtcccattatgatgcctctggcagaatcaggaaaggtcctgccccc 821 Query: 204 tacaaccttgaggtgcccacctac 227 || ||||| ||||| || |||||| Sbjct: 822 tataacctggaggttccaacctac 845
>ref|NM_001005843.1| Gallus gallus ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (UQCRFS1), mRNA Length = 1070 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 84 gtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttggttc 143 |||||||||||||||||||| | || || | ||||||||||| |||||||||| | | Sbjct: 702 gtctgcactcatcttggttgtgtaccaattgctaactctggagattttggtggttattac 761 Query: 144 tgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgccccg 203 ||||||||||| || ||||| || || ||||||||||||| | || || |||||||| Sbjct: 762 tgcccgtgccacgggtcccattatgatgcctctggcagaatcaggaaaggtcctgccccc 821 Query: 204 tacaaccttgaggtgcccacctac 227 || ||||| ||||| || |||||| Sbjct: 822 tataacctggaggttccaacctac 845
>emb|AJ250370.1|CPA250370 Cyanophora paradoxa partial mRNA for ubiquinol-cytochrome C reductase iron-sulfur subunit precursor (risp gene) Length = 836 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 ||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||||||||| Sbjct: 553 tggttctgcccgtgccacggcagccactacgacatctccggccgcatccggaagggccct 612 Query: 198 gccccgtacaaccttgaggtgcc 220 || ||| ||||| |||||||| Sbjct: 613 gcgccgcttaacctggaggtgcc 635
>ref|XM_359684.1| Magnaporthe grisea 70-15 hypothetical protein (MG05093.4) partial mRNA Length = 711 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 ||||||||||| ||||||||||| ||||| || | | |||| |||||||| |||||| Sbjct: 529 ggtgtctgcacacatcttggttgtgtccccattggcgaggctggcgactttggcggttgg 588 Query: 141 ttctgcccgtgccatggctcccactacgacat 172 |||||||| ||||| || || ||||||||||| Sbjct: 589 ttctgcccctgccacggatctcactacgacat 620
>ref|XM_499709.1| Yarrowia lipolytica CLIB122, YALI0A02915g predicted mRNA Length = 678 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 121 ctggagactttggtggttggttctgcccgtgccatggctcccactacgacatctctggca 180 ||||||||||||| || ||||||||||| ||||| || ||||| |||||||| || ||| Sbjct: 536 ctggagactttggcggctggttctgcccctgccacggatcccattacgacatttccggcc 595 Query: 181 gaatccg 187 ||||||| Sbjct: 596 gaatccg 602
>emb|X91795.1|CRUCCOR C.reinhardtii mRNa for ubiquinol-cytochrome c oxidoreductase Length = 1447 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 ||||||||||||||||| ||| ||||||||||||||| ||| | || | ||||||| Sbjct: 787 tggttctgcccgtgccacggcagccactacgacatctcgggccgcattagggagggcccc 846 Query: 198 gccccgtacaaccttgaggtgcc 220 ||||| |||||||| |||||||| Sbjct: 847 gccccatacaacctggaggtgcc 869
>emb|AJ320239.1|CRE320239 Chlamydomonas reinhardtii risp gene for ubiquinol-cytochrome c reductase, exons 1-5 Length = 2847 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 ||||||||||||||||| ||| ||||||||||||||| ||| | || | ||||||| Sbjct: 2126 tggttctgcccgtgccacggcagccactacgacatctcgggccgcattagggagggcccc 2185 Query: 198 gccccgtacaaccttgaggtgcc 220 ||||| |||||||| |||||||| Sbjct: 2186 gccccatacaacctggaggtgcc 2208
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 121 ctggagactttggtggttggttctgcccgtgccatggctcccactacgacatctctggca 180 ||||||||||||| || ||||||||||| ||||| || ||||| |||||||| || ||| Sbjct: 346229 ctggagactttggcggctggttctgcccctgccacggatcccattacgacatttccggcc 346288 Query: 181 gaatccg 187 ||||||| Sbjct: 346289 gaatccg 346295
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 135 ggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccg 187 ||||||||||| || ||||| || |||||||||||||| |||||| ||||||| Sbjct: 627862 ggttggttctgtccttgccacggttcccactacgacatttctggccgaatccg 627810 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ttggtgtctgcactcatcttggttg 103 ||||||||||||| ||||||||||| Sbjct: 627977 ttggtgtctgcacacatcttggttg 627953
>ref|XM_570926.1| Cryptococcus neoformans var. neoformans JEC21 ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (CNE02310) partial mRNA Length = 840 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 135 ggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccg 187 ||||||||||| || ||||| || |||||||||||||| |||||| ||||||| Sbjct: 709 ggttggttctgtccttgccacggttcccactacgacatttctggccgaatccg 761 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ttggtgtctgcactcatcttggttg 103 ||||||||||||| ||||||||||| Sbjct: 653 ttggtgtctgcacacatcttggttg 677
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 126 gactttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatc 185 |||||||| || ||||||||||| ||||| || || |||||||||||||| ||| | ||| Sbjct: 1276754 gactttggcggctggttctgcccctgccacggttctcactacgacatctccggccgtatc 1276813 Query: 186 cgcaagggccctgcccc 202 | ||||| |||||||| Sbjct: 1276814 aggaagggtcctgcccc 1276830
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgcc 200 |||||||||||||| ||| |||||||||| ||| ||| | |||||| | ||||||||| Sbjct: 667018 ttctgcccgtgccacggcagccactacgacccctccggccgtatccgccaaggccctgcc 666959 Query: 201 ccgtacaaccttgaggtgcc 220 ||| |||||||||||||| Sbjct: 666958 ccgctgaaccttgaggtgcc 666939
>ref|XM_460873.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F12771g) partial mRNA Length = 477 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaat 184 ||||||||||||||||| || || ||||| || |||||||| |||||||| ||||| Sbjct: 343 tttggtggttggttctgtccttgtcatggttctcactacgatatctctggtagaat 398
>ref|XM_838166.1| Leishmania major strain Friedlin reiske iron-sulfur protein precursor (LMJ_1083) partial mRNA Length = 894 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgcc 200 |||||||||||||| ||| |||||||||| ||| ||| | |||||| | ||||||||| Sbjct: 766 ttctgcccgtgccacggcagccactacgacccctccggccgtatccgccaaggccctgcc 825 Query: 201 ccgtacaaccttgaggtgcc 220 ||| |||||||||||||| Sbjct: 826 ccgctgaaccttgaggtgcc 845
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaat 184 ||||||||||||||||| || || ||||| || |||||||| |||||||| ||||| Sbjct: 1023267 tttggtggttggttctgtccttgtcatggttctcactacgatatctctggtagaat 1023322
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||||||||||||||||| || |||||||| | ||| ||| | ||||||||||| Sbjct: 4489625 tggttctgcccgtgccatggatcgcactacgatacctccggccgcatccgcaaggg 4489680
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 126 gactttggtggttggttctgcccgtgccatggctcccactacga 169 ||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 508675 gactttggtggctggttctgcccatgccacggttcccactacga 508718
>ref|NM_210148.1| Eremothecium gossypii AEL067Wp (AEL067W), mRNA Length = 639 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 126 gactttggtggttggttctgcccgtgccatggctcccactacga 169 ||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 505 gactttggtggctggttctgcccatgccacggttcccactacga 548
>ref|XM_447387.1| Candida glabrata CBS138 hypothetical protein (CAGL0I03190g) partial mRNA Length = 642 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 126 gactttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaat 184 ||||| ||||||||||||||||| || || || || |||||||| |||||||| ||||| Sbjct: 508 gacttcggtggttggttctgcccttgtcacggttctcactacgatatctctggtagaat 566
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 126 gactttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaat 184 ||||| ||||||||||||||||| || || || || |||||||| |||||||| ||||| Sbjct: 274115 gacttcggtggttggttctgcccttgtcacggttctcactacgatatctctggtagaat 274057
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccc 196 ||||||||||||||||||||||| || ||||||| | | ||| | |||||||| ||||| Sbjct: 2177391 tggttctgcccgtgccatggctcgcagtacgacaccgccggccgcatccgcaaaggccc 2177333
>gb|AE005720.1| Caulobacter crescentus CB15 section 46 of 359 of the complete genome Length = 11816 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 ||||||||||| ||||| ||||| |||||||||| ||| || | ||||| ||||||||| Sbjct: 5503 tggttctgcccctgccacggctcgcactacgacacctcgggtcgtatccgtaagggccct 5562 Query: 198 gc 199 || Sbjct: 5563 gc 5564
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 ||||||||||| ||||| ||||| |||||||| | ||||||| | |||||||| Sbjct: 288635 tggttctgcccctgccacggctcgcactacgatacctctggccggatccgcaa 288687
>ref|XM_748490.1| Aspergillus fumigatus Af293 ubiquinol-cytochrome c reductase iron-sulfur subunit precursor (Afu5g10610) partial mRNA Length = 897 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 ||||||||||| ||||| || |||||||| || ||||| ||| | ||||| ||||| ||| Sbjct: 772 tggttctgcccctgccacggttcccactatgatatctccggccgtatccggaagggtcct 831 Query: 198 gcccc 202 ||||| Sbjct: 832 gcccc 836
>ref|NM_121346.2| Arabidopsis thaliana oxidoreductase/ ubiquinol-cytochrome-c reductase AT5G13430 mRNA, complete cds Length = 1222 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || ||||||||| | || ||||||||| | Sbjct: 724 aagaatccagaatggttagtggttgttggagtgtgcactcatttggggtgcatccccttg 783 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 784 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 843 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 844 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 903 Query: 234 ttggaaga 241 ||||||| Sbjct: 904 ctggaaga 911
>ref|XM_957255.1| Neurospora crassa OR74A hypothetical protein (NCU06606.1) partial mRNA Length = 696 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 132 ggtggttggttctgcccgtgccatggctcccactacgacatctctggc 179 ||||| ||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 565 ggtggctggttctgcccttgccacggttctcactacgatatctctggc 612
>ref|XM_326460.1| Neurospora crassa OR74A hypothetical protein (NCU06606.1) partial mRNA Length = 696 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 132 ggtggttggttctgcccgtgccatggctcccactacgacatctctggc 179 ||||| ||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 565 ggtggctggttctgcccttgccacggttctcactacgatatctctggc 612
>gb|AC110374.3| Mus musculus BAC clone RP23-293P18 from 15, complete sequence Length = 199869 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 275 ccagtacctaccaacatatattct 298 |||||||||||||||||||||||| Sbjct: 143056 ccagtacctaccaacatatattct 143079
>emb|X02472.1|NCCYRFES Neurospora gene for mitochondrial ubiquinol-cytochrome c reductase iron-sulfur subunit Length = 1790 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 132 ggtggttggttctgcccgtgccatggctcccactacgacatctctggc 179 ||||| ||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 1354 ggtggctggttctgcccttgccacggttctcactacgatatctctggc 1401
>emb|AL163572.1|ATT22N19 Arabidopsis thaliana DNA chromosome 5, BAC clone T22N19 (ESSA project) Length = 68948 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Minus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || ||||||||| | || ||||||||| | Sbjct: 48787 aagaatccagaatggttagtggttgttggagtgtgcactcatttggggtgcatccccttg 48728 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 48727 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 48668 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 48667 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 48608 Query: 234 ttggaaga 241 ||||||| Sbjct: 48607 ctggaaga 48600 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Minus Query: 131 tggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 |||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 51727 tggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaa 51668 Query: 191 gggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||||||||||| Sbjct: 51667 aggtcctgcaccatacaacctggaagtaccgacctacagcttcttggaaga 51617
>gb|AF375413.1| Arabidopsis thaliana AT5g13430/T22N19_80 mRNA, complete cds Length = 1067 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || ||||||||| | || ||||||||| | Sbjct: 690 aagaatccagaatggttagtggttgttggagtgtgcactcatttggggtgcatccccttg 749 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 750 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 809 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 810 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 869 Query: 234 ttggaaga 241 ||||||| Sbjct: 870 ctggaaga 877
>gb|AY066055.1| Arabidopsis thaliana AT5g13430/T22N19_80 mRNA, complete cds Length = 819 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || ||||||||| | || ||||||||| | Sbjct: 610 aagaatccagaatggttagtggttgttggagtgtgcactcatttggggtgcatccccttg 669 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 670 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 729 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 730 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 789 Query: 234 ttggaaga 241 ||||||| Sbjct: 790 ctggaaga 797
>dbj|AK221169.1| Arabidopsis thaliana mRNA for ubiquinol--cytochrome-c reductase -like protein, partial cds, clone: RAFL22-96-P11 Length = 800 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||||||| || | || |||| || ||||||||| | || ||||||||| | Sbjct: 334 aagaatccagagtggttgatcgtggttggagtatgcactcatttggggtgcatccccttg 393 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 394 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 453 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 454 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccgacctacagcttc 513 Query: 234 ttggaaga 241 |||||||| Sbjct: 514 ttggaaga 521
>emb|BX830387.1|CNS0A1JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1011 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || ||||||||| | || ||||||||| | Sbjct: 642 aagaatccagaatggttagtggttgttggagtgtgcactcatttggggtgcatccccttg 701 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 702 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 761 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 762 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 821 Query: 234 ttggaaga 241 ||||||| Sbjct: 822 ctggaaga 829
>emb|BX829878.1|CNS0A1B9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1031 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || ||||||||| | || ||||||||| | Sbjct: 679 aagaatccagaatggttagtggttgttggagtgtgcactcatttggggtgcatccccttg 738 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 739 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 798 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 799 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 858 Query: 234 ttggaaga 241 ||||||| Sbjct: 859 ctggaaga 866
>emb|BX831700.1|CNS0A14K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZF01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 542 Score = 48.1 bits (24), Expect = 0.028 Identities = 147/188 (78%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || ||||||||| | || ||||||||| | Sbjct: 135 aagaatccagaatggttagtggttgttggagtgtgcactcatttggggtgcatccccttg 194 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 195 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 254 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 255 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 314 Query: 234 ttggaaga 241 ||||||| Sbjct: 315 ctggaaga 322
>ref|NM_121347.3| Arabidopsis thaliana oxidoreductase/ ubiquinol-cytochrome-c reductase AT5G13440 mRNA, complete cds Length = 1286 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Plus Query: 131 tggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 |||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 852 tggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaa 911 Query: 191 gggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||||||||||| Sbjct: 912 aggtcctgcaccatacaacctggaagtaccgacctacagcttcttggaaga 962
>gb|BC019934.1| Mus musculus ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, mRNA (cDNA clone MGC:30985 IMAGE:5249225), complete cds Length = 1194 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 719 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 778 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 779 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 837
>gb|BT010222.1| Drosophila melanogaster RH01528 full insert cDNA Length = 931 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||| ||||| ||||||||||||||| ||| || || ||||||||||| Sbjct: 717 ctgcccctgccacggctcccactacgacgcctccggaaggatccgcaaggg 767
>gb|DQ445508.1| Graphocephala atropunctata isolate WHGA0169 Rieske iron-sulfur protein 1 mRNA, complete cds Length = 819 Score = 46.1 bits (23), Expect = 0.11 Identities = 65/79 (82%) Strand = Plus / Plus Query: 121 ctggagactttggtggttggttctgcccgtgccatggctcccactacgacatctctggca 180 |||| ||||||||||| | | ||| || |||||||||||||||||||| ||||| Sbjct: 677 ctggtgactttggtggatattactgtccttgccatggctcccactacgatgcttctggtc 736 Query: 181 gaatccgcaagggccctgc 199 ||||||||||||| ||||| Sbjct: 737 gaatccgcaagggacctgc 755
>emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on chromosome 13 Contains the gene for the ortholog of rat and human ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 UQCRFS1, a novel gene and a CpG island, complete sequence Length = 194065 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Minus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 77413 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 77354 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 77353 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 77295
>gb|DQ122922.1| Chlamydomonas incerta mitochondrial ubiquinol-cytochrome c oxidoreductase (RisP) mRNA, partial cds; nuclear gene for mitochondrial product Length = 921 Score = 46.1 bits (23), Expect = 0.11 Identities = 68/83 (81%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccct 197 ||||||||||| ||||| ||| |||||||||||| || ||| | || || ||||||| Sbjct: 511 tggttctgcccctgccacggcagccactacgacatttcgggccgcattcgggagggcccc 570 Query: 198 gccccgtacaaccttgaggtgcc 220 ||||| |||||||| || ||||| Sbjct: 571 gccccctacaacctggaagtgcc 593
>ref|NM_164426.1| Drosophila melanogaster Rieske iron-sulfur protein CG7361-RB, transcript variant B (RFeSP), mRNA Length = 883 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||| ||||| ||||||||||||||| ||| || || ||||||||||| Sbjct: 679 ctgcccctgccacggctcccactacgacgcctccggaaggatccgcaaggg 729
>gb|AY081510.1| Arabidopsis thaliana ubiquinol--cytochrome-c reductase-like protein (At5g13440) mRNA, complete cds Length = 932 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Plus Query: 131 tggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 |||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 693 tggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaa 752 Query: 191 gggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||||||||||| Sbjct: 753 aggtcctgcaccatacaacctggaagtaccgacctacagcttcttggaaga 803
>ref|NM_080009.2| Drosophila melanogaster Rieske iron-sulfur protein CG7361-RA, transcript variant A (RFeSP), mRNA Length = 938 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||| ||||| ||||||||||||||| ||| || || ||||||||||| Sbjct: 734 ctgcccctgccacggctcccactacgacgcctccggaaggatccgcaaggg 784
>dbj|AK152391.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830067N02 product:ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, full insert sequence Length = 1200 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 724 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 783 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 784 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 842
>gb|AC104630.1| Drosophila melanogaster, chromosome 2L, region 22B-22C, BAC clone BACR19B15, complete sequence Length = 180088 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||| ||||| ||||||||||||||| ||| || || ||||||||||| Sbjct: 142510 ctgcccctgccacggctcccactacgacgcctccggaaggatccgcaaggg 142560
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 121 ctggagactttggtggttggttctgcccgtgccatggctcccactacgaca 171 |||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||| Sbjct: 331041 ctggtgacttcggtggctggttctgcccctgccacggctctcactatgaca 331091
>dbj|AK153139.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830124H22 product:ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, full insert sequence Length = 1084 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 699 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 758 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 759 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 817
>gb|AC092188.1|AC092188 Drosophila melanogaster, chromosome 2L, region 22B-22C, BAC clone BACR28O09, complete sequence Length = 177326 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||| ||||| ||||||||||||||| ||| || || ||||||||||| Sbjct: 32563 ctgcccctgccacggctcccactacgacgcctccggaaggatccgcaaggg 32613
>dbj|AK012180.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610528M22 product:UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, MITOCHONDRIAL PRECURSOR (EC 1.10.2.2) (RIESKE IRON-SULFUR PROTEIN) (RISP) [CONTAINS: UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN (COMPLEX III SUBUNIT IX)] homolog [Bos taurus], full insert sequence Length = 1048 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 663 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 722 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 723 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 781
>dbj|AK014470.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4430402G14 product:UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, MITOCHONDRIAL PRECURSOR (EC 1.10.2.2) (RIESKE IRON-SULFUR PROTEIN) (RISP) [CONTAINS: UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN (COMPLEX III SUBUNIT IX)] homolog [Bos taurus], full insert sequence Length = 1316 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 715 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 774 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 775 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 833
>dbj|AK003966.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110030B05 product:ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, full insert sequence Length = 1060 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 675 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 734 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 735 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 793
>gb|AF370533.1|AF370533 Arabidopsis thaliana ubiquinol--cytochrome-c reductase-like protein (T22N19_90) mRNA, complete cds Length = 1080 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Plus Query: 131 tggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 |||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 749 tggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaa 808 Query: 191 gggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||||||||||| Sbjct: 809 aggtcctgcaccatacaacctggaagtaccgacctacagcttcttggaaga 859
>emb|BX829960.1|CNS0A1KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1003 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Plus Query: 131 tggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 |||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 708 tggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaa 767 Query: 191 gggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||||||||||| Sbjct: 768 aggtcctgcaccatacaacctggaagtaccgacctacagcttcttggaaga 818
>emb|BX830982.1|CNS0A0P7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1231 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Plus Query: 131 tggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 |||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 797 tggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaa 856 Query: 191 gggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||||||||||| Sbjct: 857 aggtcctgcaccatacaacctggaagtaccgacctacagcttcttggaaga 907
>ref|NM_025710.1| Mus musculus ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (Uqcrfs1), mRNA Length = 1316 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 715 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 774 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 775 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 833
>gb|AY086148.1| Arabidopsis thaliana clone 21819 mRNA, complete sequence Length = 1226 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Plus Query: 131 tggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaa 190 |||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 853 tggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaa 912 Query: 191 gggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||||||||||| Sbjct: 913 aggtcctgcaccatacaacctggaagtaccgacctacagcttcttggaaga 963
>dbj|AK217705.1| Mus musculus cDNA, clone:Y2G0142L01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000042834, based on BLAT search Length = 378 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 209 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 268 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 269 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 327
>dbj|AK212564.1| Mus musculus cDNA, clone:Y2G0125G04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000042834, based on BLAT search Length = 336 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 209 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 268 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 269 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 327
>dbj|AK210928.1| Mus musculus cDNA, clone:Y2G0120B13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000042834, based on BLAT search Length = 384 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 197 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 256 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 257 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 315
>dbj|AK180820.1| Mus musculus cDNA, clone:Y0G0116A06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000042834, based on BLAT search Length = 435 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 248 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 307 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 308 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 366
>gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 of 83 of the complete sequence Length = 343161 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||| ||||| ||||||||||||||| ||| || || ||||||||||| Sbjct: 71522 ctgcccctgccacggctcccactacgacgcctccggaaggatccgcaaggg 71472
>gb|AC004445.1|AC004445 Drosophila melanogaster DNA sequence (P1 DS00445 (D93)), complete sequence Length = 61852 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaaggg 193 |||||| ||||| ||||||||||||||| ||| || || ||||||||||| Sbjct: 27816 ctgcccctgccacggctcccactacgacgcctccggaaggatccgcaaggg 27766
>gb|BC047125.1| Mus musculus ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, mRNA (cDNA clone IMAGE:5009388) Length = 1194 Score = 46.1 bits (23), Expect = 0.11 Identities = 95/119 (79%) Strand = Plus / Plus Query: 81 ggtgtctgcactcatcttggttgcatcccccttcccaactctggagactttggtggttgg 140 |||||||| |||||||||||||| | ||| || | ||| | ||||| |||||||| | Sbjct: 719 ggtgtctgtactcatcttggttgtgtacccattgcaaacgcaggagattttggtggctat 778 Query: 141 ttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 | ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 779 tattgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 837
>ref|XM_654818.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2306.2), mRNA Length = 717 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctc 175 ||||||||||| |||||||| || |||||||| ||||| Sbjct: 592 tggttctgcccctgccatggttcgcactacgatatctc 629
>gb|AY558341.1| Saccharomyces cerevisiae clone FLH111526.01X YEL024W gene, complete cds Length = 648 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgc 188 ||||||||||||||||| || |||||||| || || || || || || || |||||| | Sbjct: 517 tttggtggttggttctgtccttgccatggttcacattatgatatttccggtagaatcaga 576 Query: 189 aagggccctgcccc 202 ||||| |||||||| Sbjct: 577 aagggacctgcccc 590
>ref|XM_754879.1| Ustilago maydis 521 hypothetical protein (UM03825.1) partial mRNA Length = 1236 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Plus Query: 126 gactttggtggttggttctgcccgtgccatggctcccactacgacatctc 175 |||||||| || |||| |||||| ||||| || || |||||||||||||| Sbjct: 1096 gactttggcggctggtactgcccttgccacggttcgcactacgacatctc 1145
>ref|XM_385427.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05251.1) partial mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Plus Query: 135 ggttggttctgcccgtgccatggctcccactacgacatctctggcagaat 184 |||||||||||||| ||||| || || |||||||| ||||| ||| |||| Sbjct: 580 ggttggttctgcccttgccacggttctcactacgatatctccggccgaat 629
>emb|AL022104.2|SPBC16H5 S.pombe chromosome II cosmid c16H5 Length = 35660 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 attggtgtctgcactcatcttggttg 103 ||||||||||| |||||||||||||| Sbjct: 20440 attggtgtctgtactcatcttggttg 20415
>dbj|AK221073.1| Arabidopsis thaliana mRNA for ubiquinol--cytochrome-c reductase -like protein, partial cds, clone: RAFL22-79-D17 Length = 414 Score = 44.1 bits (22), Expect = 0.44 Identities = 133/170 (78%) Strand = Plus / Plus Query: 72 gtggttattggtgtctgcactcatcttggttgcatcccccttcccaactctggagacttt 131 |||||| |||| || ||||||||| | || ||||||||| | || || |||| || | | Sbjct: 48 gtggttgttggagtgtgcactcatttggggtgcatccccttgcctaatgctggtgattat 107 Query: 132 ggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgcaag 191 ||||||||||| || ||||| || || || || ||||| || ||||| ||||| | || Sbjct: 108 ggtggttggttttgtccgtgtcacggatcacattacgatatatctggaagaattaggaaa 167 Query: 192 ggccctgccccgtacaaccttgaggtgcccacctacagtttcttggaaga 241 || ||||| || |||||||| || || || |||||||| ||| ||||||| Sbjct: 168 ggtcctgcaccatacaacctggaagtaccaacctacagcttcctggaaga 217
>ref|NM_001021849.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC16H5.06), partial mRNA Length = 687 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 attggtgtctgcactcatcttggttg 103 ||||||||||| |||||||||||||| Sbjct: 505 attggtgtctgtactcatcttggttg 530
>emb|AL116266.1|CNS01D1U Botrytis cinerea strain T4 cDNA library Length = 720 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 39 gacgctgagcgtgtgaagaacccagagtggctggtggttattggtgtctgcactcatctt 98 |||||||| ||||| ||||| ||||| ||| |||| | ||||||||||||| |||||| Sbjct: 199 gacgctgaccgtgttaagaagccagaatggttggtcatggttggtgtctgcacacatctt 258 Query: 99 gg 100 || Sbjct: 259 gg 260
>emb|AL114037.1|CNS01BBX Botrytis cinerea strain T4 cDNA library Length = 480 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 39 gacgctgagcgtgtgaagaacccagagtggctggtggttattggtgtctgcactcatctt 98 |||||||| ||||| ||||| ||||| ||| |||| | ||||||||||||| |||||| Sbjct: 103 gacgctgaccgtgttaagaagccagaatggttggtcatggttggtgtctgcacacatctt 162 Query: 99 gg 100 || Sbjct: 163 gg 164
>emb|AL113155.1|CNS01ANF Botrytis cinerea strain T4 cDNA library Length = 780 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 39 gacgctgagcgtgtgaagaacccagagtggctggtggttattggtgtctgcactcatctt 98 |||||||| ||||| ||||| ||||| ||| |||| | ||||||||||||| |||||| Sbjct: 212 gacgctgaccgtgttaagaagccagaatggttggtcatggttggtgtctgcacacatctt 271 Query: 99 gg 100 || Sbjct: 272 gg 273
>emb|AL111908.1|CNS019OS Botrytis cinerea strain T4 cDNA library Length = 480 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 39 gacgctgagcgtgtgaagaacccagagtggctggtggttattggtgtctgcactcatctt 98 |||||||| ||||| ||||| ||||| ||| |||| | ||||||||||||| |||||| Sbjct: 90 gacgctgaccgtgttaagaagccagaatggttggtcatggttggtgtctgcacacatctt 149 Query: 99 gg 100 || Sbjct: 150 gg 151
>gb|U18530.1|SCE9871 Saccharomyces cerevisiae chromosome V cosmids 9871, 8199, 9867, 9495 and lambda clones 6693 and 5898 Length = 62643 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgc 188 ||||||||||||||||| || |||||||| || || || || || || || |||||| | Sbjct: 18182 tttggtggttggttctgtccttgccatggttcacattatgatatttccggtagaatcaga 18241 Query: 189 aagggccctgcccc 202 ||||| |||||||| Sbjct: 18242 aagggacctgcccc 18255
>gb|AE004857.1| Pseudomonas aeruginosa PAO1, section 418 of 529 of the complete genome Length = 10948 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 141 ttctgcccgtgccatggctcccactacgac 170 |||||||| ||||| ||||||||||||||| Sbjct: 8058 ttctgcccttgccacggctcccactacgac 8029
>gb|U40480.1|SPU40480 Schizosaccharomyces pombe Rieske iron-sulfur protein (Rip1) mRNA, complete cds Length = 746 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 attggtgtctgcactcatcttggttg 103 ||||||||||| |||||||||||||| Sbjct: 559 attggtgtctgtactcatcttggttg 584
>gb|M24500.1|YSCRIP1A S.cerevisiae Rieske iron-sulfur protein (RIP1) gene, complete cds Length = 1238 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgc 188 ||||||||||||||||| || |||||||| || || || || || || || |||||| | Sbjct: 839 tttggtggttggttctgtccttgccatggttcacattatgatatttccggtagaatcaga 898 Query: 189 aagggccctgcccc 202 ||||| |||||||| Sbjct: 899 aagggacctgcccc 912
>gb|M23316.1|YSCRIP1 Yeast (S.cerevisiae; DC5) Rieske iron-sulfur protein gene, complete cds Length = 1238 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Plus Query: 129 tttggtggttggttctgcccgtgccatggctcccactacgacatctctggcagaatccgc 188 ||||||||||||||||| || |||||||| || || || || || || || |||||| | Sbjct: 839 tttggtggttggttctgtccttgccatggttcacattatgatatttccggtagaatcaga 898 Query: 189 aagggccctgcccc 202 ||||| |||||||| Sbjct: 899 aagggacctgcccc 912
>gb|DQ213880.1| Taeniopygia guttata clone 0058P0044G07 ubiquinol-cytochrome c reductase variant 2-like mRNA, complete sequence Length = 1028 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 |||||| ||||| ||||||||||| ||| ||||||||| ||| | || |||||||| Sbjct: 720 ctgcccctgccacggctcccactatgacgcctctggcaggatcaggaaaggccctgc 776
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 128 ctttggtggttggttctgcccgtgccatggctc 160 |||||| || ||||||||||| ||||||||||| Sbjct: 1492434 ctttggcggctggttctgcccttgccatggctc 1492402
>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the 5' end of the RSU1 gene for Ras suppressor protein 1, the 3' end of the CUBN gene for cubilin (intrinsic factor-cobalamin receptor) and a CpG island, complete sequence Length = 184703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 agtttttgtttcaggactatc 371 ||||||||||||||||||||| Sbjct: 8625 agtttttgtttcaggactatc 8605
>emb|AL162455.14| Human DNA sequence from clone RP11-62D23 on chromosome 13 Contains part of the GPC6 gene for glypican 6 and a novel gene, complete sequence Length = 173736 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ctacagtttcttggaagataa 244 ||||||||||||||||||||| Sbjct: 64401 ctacagtttcttggaagataa 64421
>emb|AL626770.9| Mouse DNA sequence from clone RP23-379J18 on chromosome 11 Contains a novel gene and a serine/arginine repetitive matrix 1 (Srrm1) pseudogene, complete sequence Length = 188854 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 tccacaggagtgaattcctgt 318 ||||||||||||||||||||| Sbjct: 42029 tccacaggagtgaattcctgt 42009
>gb|AC160031.8| Mus musculus 10 BAC RP24-395H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 191028 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 ctccacaggagtgaattcctg 317 ||||||||||||||||||||| Sbjct: 129325 ctccacaggagtgaattcctg 129345
>gb|AE009490.1| Brucella melitensis 16M chromosome I, section 47 of 195 of the complete sequence Length = 11036 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 128 ctttggtggttggttctgcccgtgccatggctc 160 |||||| || ||||||||||| ||||||||||| Sbjct: 594 ctttggcggctggttctgcccttgccatggctc 626
>gb|AF035964.1|AF035964 Brucella abortus tRNA/rRNA methyltransferase (yibK), ATP-binding protein A (bapA), ATP-binding protein B (bapB), and Rieske Fe-S protein genes, complete cds; and cytochrome b gene, partial cds Length = 5692 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 128 ctttggtggttggttctgcccgtgccatggctc 160 |||||| || ||||||||||| ||||||||||| Sbjct: 5192 ctttggcggctggttctgcccttgccatggctc 5224
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 128 ctttggtggttggttctgcccgtgccatggctc 160 |||||| || ||||||||||| ||||||||||| Sbjct: 1510497 ctttggcggctggttctgcccttgccatggctc 1510465
>emb|CT033644.1| Platynereis dumerilii EST IB0AAA16DC02EM1 Length = 957 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 174 tctggcagaatccgcaagggccctgcccc 202 |||||||||||||||||||| || ||||| Sbjct: 776 tctggcagaatccgcaagggacccgcccc 804
>emb|CT033533.1| Platynereis dumerilii EST IB0AAA18DC05EM1 Length = 864 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 174 tctggcagaatccgcaagggccctgcccc 202 |||||||||||||||||||| || ||||| Sbjct: 798 tctggcagaatccgcaagggacccgcccc 826
>emb|CT033153.1| Platynereis dumerilii EST IB0AAA25DC05EM1 Length = 915 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 174 tctggcagaatccgcaagggccctgcccc 202 |||||||||||||||||||| || ||||| Sbjct: 765 tctggcagaatccgcaagggacccgcccc 793
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 128 ctttggtggttggttctgcccgtgccatggctc 160 |||||| || ||||||||||| ||||||||||| Sbjct: 1507651 ctttggcggctggttctgcccttgccatggctc 1507619
>gb|AC005591.1| Homo sapiens chromosome 16, P1 clone 94-10H (LANL), complete sequence Length = 78941 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 11652 ctgcccgtgccatggctccc 11633
>gb|BC020241.1| Homo sapiens cDNA clone IMAGE:4661475, with apparent retained intron Length = 1928 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 751 ctgcccgtgccatggctccc 770
>emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in linkage group 1, complete sequence Length = 230420 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 taattgtttctcctatgttg 439 |||||||||||||||||||| Sbjct: 131547 taattgtttctcctatgttg 131528
>gb|AC092117.4| Homo sapiens chromosome 16 clone CTD-2270P14, complete sequence Length = 211606 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 33732 ctgcccgtgccatggctccc 33751
>gb|AC141586.2| Homo sapiens chromosome 16 clone CTD-3126B10, complete sequence Length = 127397 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 108184 ctgcccgtgccatggctccc 108203 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 23054 ctgcccgtgccatggctccc 23035
>emb|CR752649.9| Zebrafish DNA sequence from clone DKEY-238J13, complete sequence Length = 164233 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tacagtttcttggaagataa 244 |||||||||||||||||||| Sbjct: 25601 tacagtttcttggaagataa 25582
>emb|AL607026.11| Human DNA sequence from clone RP11-498G22 on chromosome 10, complete sequence Length = 172911 Score = 40.1 bits (20), Expect = 6.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 332 tgttctcaatgtggctaggagtttttgt 359 ||||||||||||| |||||||||||||| Sbjct: 165678 tgttctcaatgtg-ctaggagtttttgt 165704
>emb|CR388002.6| Zebrafish DNA sequence from clone DKEY-75M8 in linkage group 1, complete sequence Length = 228120 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 taattgtttctcctatgttg 439 |||||||||||||||||||| Sbjct: 162258 taattgtttctcctatgttg 162277
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatgg 157 |||||||||||||||||||| Sbjct: 913977 tggttctgcccgtgccatgg 913996
>emb|X05630.1|RCPETG Rhodopseudomonas capsulata petABC operon Length = 4007 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacga 169 ||||||||||| ||||| ||||| |||||||| Sbjct: 1182 tggttctgcccctgccacggctcgcactacga 1213
>emb|X05799.1|PDBC1 P. denitrificans bc1 gene for cytochrome bc1 complex (EC 1.10.2.2) Length = 3840 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgca 189 ||||||||||||||||| || || || ||||||| ||| ||| | ||||||| Sbjct: 695 tggttctgcccgtgccacgggtcgcattacgacacctcgggccgcatccgca 746
>emb|X03476.1|RCFBC Rhodopseudomonas sphaeroides fbc operon (fbcF, fbcB, fbcC genes) Length = 3874 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacga 169 ||||||||||| ||||| ||||| |||||||| Sbjct: 1293 tggttctgcccctgccacggctcgcactacga 1324
>emb|AL645564.6| Mouse DNA sequence from clone RP23-35N22 on chromosome 11 Contains part of a novel gene and two CpG islands, complete sequence Length = 205101 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ctttggtggttggttctgcc 147 |||||||||||||||||||| Sbjct: 157971 ctttggtggttggttctgcc 157990
>emb|BX511162.8| Zebrafish DNA sequence from clone DKEY-240B22 in linkage group 1, complete sequence Length = 119612 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 taattgtttctcctatgttg 439 |||||||||||||||||||| Sbjct: 16869 taattgtttctcctatgttg 16850
>emb|BX323017.6| Zebrafish DNA sequence from clone DKEYP-41F9, complete sequence Length = 141192 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 taattgtttctcctatgttg 439 |||||||||||||||||||| Sbjct: 33841 taattgtttctcctatgttg 33822
>emb|AJ785968.1| Homo sapiens mRNA for PDPK2 protein Length = 2387 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 636 ctgcccgtgccatggctccc 617
>gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154495 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 tatgttgctactggattgtaagtt 456 |||| ||||||||||||||||||| Sbjct: 38775 tatggtgctactggattgtaagtt 38798
>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence Length = 161178 Score = 40.1 bits (20), Expect = 6.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 332 tgttctcaatgtggctaggagtttttgt 359 ||||||||||||| |||||||||||||| Sbjct: 131633 tgttctcaatgtg-ctaggagtttttgt 131607
>ref|XM_496112.2| PREDICTED: Homo sapiens similar to 3-phosphoinositide dependent protein kinase 1 (hPDK1), transcript variant 1 (LOC653650), mRNA Length = 2396 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 651 ctgcccgtgccatggctccc 632
>ref|XM_935349.1| PREDICTED: Homo sapiens similar to 3-phosphoinositide dependent protein kinase 1 (hPDK1), transcript variant 5 (LOC653650), mRNA Length = 2595 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 651 ctgcccgtgccatggctccc 632
>ref|XM_935348.1| PREDICTED: Homo sapiens similar to 3-phosphoinositide dependent protein kinase 1 (hPDK1), transcript variant 4 (LOC653650), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 651 ctgcccgtgccatggctccc 632
>gb|BC002659.1|BC002659 Homo sapiens, clone IMAGE:3609437, mRNA Length = 1254 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 62 ctgcccgtgccatggctccc 81
>ref|XM_394267.2| PREDICTED: Apis mellifera similar to ENSANGP00000026211 (LOC410791), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ctgttgcgctgttattttgt 334 |||||||||||||||||||| Sbjct: 2069 ctgttgcgctgttattttgt 2088
>gb|AC092577.3| Homo sapiens BAC clone RP11-12E5 from 4, complete sequence Length = 73928 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 439 gctactggattgtaagttactttg 462 ||||||||||| |||||||||||| Sbjct: 11109 gctactggattataagttactttg 11132
>emb|BX829847.1|CNS0A1CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB40ZE04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1039 Score = 40.1 bits (20), Expect = 6.9 Identities = 146/188 (77%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || || |||||| | || ||||||||| | Sbjct: 680 aagaatccagaatggttagtggttgttggagtgtgaactcatttggggtgcatccccttg 739 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 740 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 799 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 800 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 859 Query: 234 ttggaaga 241 ||||||| Sbjct: 860 ctggaaga 867
>emb|BX833733.1|CNS0A0BW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 992 Score = 40.1 bits (20), Expect = 6.9 Identities = 146/188 (77%) Strand = Plus / Plus Query: 54 aagaacccagagtggctggtggttattggtgtctgcactcatcttggttgcatccccctt 113 ||||| ||||| ||| | |||||| |||| || || |||||| | || ||||||||| | Sbjct: 680 aagaatccagaatggttagtggttgttggagtgtgaactcatttggggtgcatccccttg 739 Query: 114 cccaactctggagactttggtggttggttctgcccgtgccatggctcccactacgacatc 173 || || |||| || | |||||||||||| || ||||| || || || || ||||| || Sbjct: 740 cctaatgctggtgattatggtggttggttttgtccgtgtcacggatcacattacgatata 799 Query: 174 tctggcagaatccgcaagggccctgccccgtacaaccttgaggtgcccacctacagtttc 233 ||||| ||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct: 800 tctggaagaattaggaaaggtcctgcaccatacaacctggaagtaccaacctacagcttc 859 Query: 234 ttggaaga 241 ||||||| Sbjct: 860 ctggaaga 867
>gb|AC093517.3| Homo sapiens chromosome 16 clone CTD-2593F12, complete sequence Length = 160606 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 27152 ctgcccgtgccatggctccc 27171
>gb|AC093525.3| Homo sapiens chromosome 16 clone RP11-20I23, complete sequence Length = 157518 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgcccgtgccatggctccc 162 |||||||||||||||||||| Sbjct: 35709 ctgcccgtgccatggctccc 35728
>dbj|AK197173.1| Mus musculus cDNA, clone:Y1G0124E03, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000042834, based on BLAT search Length = 382 Score = 40.1 bits (20), Expect = 6.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 144 tgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 258 tgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 313
>dbj|AK191429.1| Mus musculus cDNA, clone:Y1G0105N20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000042834, based on BLAT search Length = 408 Score = 40.1 bits (20), Expect = 6.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 144 tgcccgtgccatggctcccactacgacatctctggcagaatccgcaagggccctgc 199 ||||| |||||||| || ||||| ||| ||||||||| ||| | ||||||||||| Sbjct: 284 tgcccctgccatgggtcacactatgacgcctctggcaggatcaggaagggccctgc 339
>dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa257A21 Length = 34833 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 attgtaagttactttgtactgatt 470 |||||||||||||||||| ||||| Sbjct: 32134 attgtaagttactttgtattgatt 32111
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461D06 Length = 112895 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 attgtaagttactttgtactgatt 470 |||||||||||||||||| ||||| Sbjct: 11425 attgtaagttactttgtattgatt 11402
>gb|AC150478.3| Monodelphis domestica clone VMRC6-508P4, complete sequence Length = 81497 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctctggagactttggtggtt 138 |||||||||||||||||||| Sbjct: 13976 ctctggagactttggtggtt 13995
>gb|AC147872.3| Monodelphis domestica clone VMRC6-555H19, complete sequence Length = 139145 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctctggagactttggtggtt 138 |||||||||||||||||||| Sbjct: 129990 ctctggagactttggtggtt 130009
>emb|BX323453.7| Zebrafish DNA sequence from clone CH211-212G2 in linkage group 22, complete sequence Length = 212160 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 taattgtttctcctatgttg 439 |||||||||||||||||||| Sbjct: 153298 taattgtttctcctatgttg 153279
>emb|AL138478.3|CNS01DWR Human chromosome 14 DNA sequence BAC R-681H18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188717 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccccttcccaactctggaga 127 |||||||||||||||||||| Sbjct: 152320 ccccttcccaactctggaga 152301
>emb|CR812957.13| Zebrafish DNA sequence from clone DKEY-41L5 in linkage group 1, complete sequence Length = 220462 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 taattgtttctcctatgttg 439 |||||||||||||||||||| Sbjct: 170913 taattgtttctcctatgttg 170932
>emb|AL954329.7| Zebrafish DNA sequence from clone CH211-226C11 in linkage group 23, complete sequence Length = 194284 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 taattgtttctcctatgttg 439 |||||||||||||||||||| Sbjct: 11092 taattgtttctcctatgttg 11111
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctctggagactttggtggtt 138 |||||||||||||||||||| Sbjct: 1766323 ctctggagactttggtggtt 1766342
>emb|AL137785.6|CNS01DWN Human chromosome 14 DNA sequence BAC R-151G14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155729 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccccttcccaactctggaga 127 |||||||||||||||||||| Sbjct: 77109 ccccttcccaactctggaga 77128
>gb|M17522.1|PDEBC1 P.denitrificans bc1 operon genes encoding three subunits (FeS, b and c1) of the cytochrome bc1 complex, complete cds Length = 3840 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 138 tggttctgcccgtgccatggctcccactacgacatctctggcagaatccgca 189 ||||||||||||||||| || || || ||||||| ||| ||| | ||||||| Sbjct: 695 tggttctgcccgtgccacgggtcgcattacgacacctcgggccgcatccgca 746 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,537,809 Number of Sequences: 3902068 Number of extensions: 4537809 Number of successful extensions: 74931 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 74524 Number of HSP's gapped (non-prelim): 415 length of query: 510 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 488 effective length of database: 17,147,199,772 effective search space: 8367833488736 effective search space used: 8367833488736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)