ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7h19 |
|---|---|
| Clone Library Name | barley_pub |
>NOP56_MOUSE (Q9D6Z1) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 580 Score = 184 bits (468), Expect = 1e-46 Identities = 89/109 (81%), Positives = 101/109 (92%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK PAST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+ KNKGR++RYLANKC Sbjct: 317 NLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKC 376 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAI 367 SIASRIDC+S++ +S+FGEKLREQVEERL FY+ G PRKNLDVMK A+ Sbjct: 377 SIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAV 425
>NOP56_PONPY (Q5RA29) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 594 Score = 184 bits (466), Expect = 2e-46 Identities = 89/109 (81%), Positives = 101/109 (92%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK PAST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+ KNKGR++RYLANKC Sbjct: 317 NLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKC 376 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAI 367 SIASRIDC+S++ +S+FGEKLREQVEERL FY+ G PRKNLDVMK A+ Sbjct: 377 SIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAM 425
>NOP56_MACFA (Q95K50) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 594 Score = 184 bits (466), Expect = 2e-46 Identities = 89/109 (81%), Positives = 101/109 (92%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK PAST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+ KNKGR++RYLANKC Sbjct: 317 NLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKC 376 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAI 367 SIASRIDC+S++ +S+FGEKLREQVEERL FY+ G PRKNLDVMK A+ Sbjct: 377 SIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAM 425
>NOP56_HUMAN (O00567) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 594 Score = 184 bits (466), Expect = 2e-46 Identities = 89/109 (81%), Positives = 101/109 (92%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK PAST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+ KNKGR++RYLANKC Sbjct: 317 NLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKC 376 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAI 367 SIASRIDC+S++ +S+FGEKLREQVEERL FY+ G PRKNLDVMK A+ Sbjct: 377 SIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAM 425
>YZVL_CAEEL (Q21276) Hypothetical protein K07C5.4 in chromosome V| Length = 486 Score = 167 bits (424), Expect = 2e-41 Identities = 82/144 (56%), Positives = 105/144 (72%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK PAST+QILGAEKALFRALKTR NTPKYGL+FHSSFIG+A TKNKGR++RYLANKC Sbjct: 323 NLAKYPASTVQILGAEKALFRALKTRSNTPKYGLLFHSSFIGKAGTKNKGRVSRYLANKC 382 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDGLTNTEDDDG 400 SIA+R+DC+S+ S +GE LR+QVE+RL+++ G P+KN+DVMK A + ++ Sbjct: 383 SIAARVDCFSETPVSTYGEFLRQQVEDRLEYFTSGTVPKKNIDVMKEAEEAAVEVKEKVI 442 Query: 401 KENGDASVXXXXXXXXXAEANGDA 472 K+ A+ A +A Sbjct: 443 KKKKKAAKKAKRLAEESVTATAEA 466
>SIK1_YEAST (Q12460) Protein SIK1 (Nucleolar protein NOP56)| Length = 504 Score = 144 bits (364), Expect = 2e-34 Identities = 71/110 (64%), Positives = 91/110 (82%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NL+K AST+QILGAEKALFRALKT+GNTPKYGLI+HS FI +AS KNKGR++RYLANKC Sbjct: 324 NLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFISKASAKNKGRISRYLANKC 383 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAID 370 S+ASRID YS+ S++FG L++QVE+RL+FY+ G KN ++ A++ Sbjct: 384 SMASRIDNYSEEPSNVFGSVLKKQVEQRLEFYNTGKPTLKNELAIQEAME 433
>NOP5_RAT (Q9QZ86) Nucleolar protein NOP5 (Nucleolar protein 5)| (Nopp140-associated protein) Length = 534 Score = 100 bits (250), Expect = 3e-21 Identities = 53/97 (54%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK AST+QILGAEKALFRALK+R +TPKYGLI+H+S +G+ S K+KG+++R LA K Sbjct: 307 NLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKT 366 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFY-DKGV 328 +A R D + + SSS G + R ++E RL D+G+ Sbjct: 367 VLAIRYDAFGEDSSSAMGAENRAKLEARLRILEDRGI 403
>NOP5_HUMAN (Q9Y2X3) Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58)| Length = 529 Score = 100 bits (249), Expect = 4e-21 Identities = 53/97 (54%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK AST+QILGAEKALFRALK+R +TPKYGLI+H+S +G+ S K+KG+++R LA K Sbjct: 307 NLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKT 366 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERL-DFYDKGV 328 +A R D + + SSS G + R ++E RL D+G+ Sbjct: 367 VLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGI 403
>Y5712_ARATH (O04658) Hypothetical protein At5g27120| Length = 439 Score = 99.0 bits (245), Expect = 1e-20 Identities = 51/89 (57%), Positives = 65/89 (73%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NLAK P ST+QILGAEKALFRALKT+ TPKYGLIFH+S +G+A+ KNKG+++R LA K Sbjct: 305 NLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSLAAKS 364 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERL 307 +A R D D + G + R ++E RL Sbjct: 365 VLAIRCDALGDSQDNTMGVENRLKLEARL 393
>NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein NOP5)| Length = 511 Score = 97.1 bits (240), Expect = 4e-20 Identities = 50/91 (54%), Positives = 69/91 (75%), Gaps = 2/91 (2%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 +LAK PAST+QILGAEKALFRALKT+ +TPKYGL++H+S +G+A+ KNKG++AR LA K Sbjct: 308 SLAKSPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQATGKNKGKIARVLAAKA 367 Query: 221 SIASRIDCYSD--MSSSIFGEKLREQVEERL 307 +++ R D ++ S G + R +VE RL Sbjct: 368 AVSLRYDALAEDRDDSGDIGLESRAKVENRL 398
>Y5714_ARATH (O04656) Hypothetical protein At5g27140| Length = 435 Score = 90.5 bits (223), Expect = 4e-18 Identities = 44/94 (46%), Positives = 66/94 (70%) Frame = +2 Query: 26 CWQSFNLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARY 205 C +NL+K P ST+QILGAEK L++ALKT+ TPKYGLI+H+ + +A+ +NKG++AR Sbjct: 257 CGSLWNLSKLPWSTIQILGAEKTLYKALKTKQATPKYGLIYHAPLVRQAAPENKGKIARS 316 Query: 206 LANKCSIASRIDCYSDMSSSIFGEKLREQVEERL 307 LA K ++A R D + + + G + R ++E RL Sbjct: 317 LAAKSALAIRCDAFGNGQDNTMGVESRLKLEARL 350
>Y694_METJA (Q58105) Hypothetical protein MJ0694| Length = 414 Score = 70.9 bits (172), Expect = 3e-12 Identities = 42/99 (42%), Positives = 59/99 (59%) Frame = +2 Query: 44 LAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKCS 223 LAK PAST+Q+LGAEKALF L+ PK+G+I++ I + +G++AR LA K + Sbjct: 272 LAKMPASTIQVLGAEKALFAHLRMGVEPPKHGIIYNHPLIQGSPHWQRGKIARALACKLA 331 Query: 224 IASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRK 340 IA+R D D + EKL ++VEE Y K +K Sbjct: 332 IAARADYVGDYIADELLEKLNKRVEEIRRKYPKPPKKKK 370
>PRP31_MOUSE (Q8CCF0) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) (U4/U6 snRNP 61 kDa protein) (Protein 61K) Length = 499 Score = 62.0 bits (149), Expect = 1e-09 Identities = 30/111 (27%), Positives = 59/111 (53%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NL+K PA + +LGA++ + P G I+HS + + + AR +A KC Sbjct: 240 NLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKC 299 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDG 373 ++A+R+D + + + G +L++++E + D + + P K + + A +DG Sbjct: 300 TLAARVDSFHESTEGKVGYELKDEIERKFDKWQE-PPPVKQVKPLPAPLDG 349
>PRP31_HUMAN (Q8WWY3) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) (U4/U6 snRNP 61 kDa protein) (hPrp31) (Protein 61K) (Serologically defined breast cancer antigen NY-BR-99) Length = 499 Score = 62.0 bits (149), Expect = 1e-09 Identities = 30/111 (27%), Positives = 59/111 (53%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NL+K PA + +LGA++ + P G I+HS + + + AR +A KC Sbjct: 240 NLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKC 299 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDG 373 ++A+R+D + + + G +L++++E + D + + P K + + A +DG Sbjct: 300 TLAARVDSFHESTEGKVGYELKDEIERKFDKWQE-PPPVKQVKPLPAPLDG 349
>PRP31_XENTR (Q6NVP6) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) Length = 498 Score = 60.8 bits (146), Expect = 3e-09 Identities = 31/111 (27%), Positives = 57/111 (51%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NL+K PA + +LGA++ + P G I+HS + + AR ++ KC Sbjct: 239 NLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVSAKC 298 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDG 373 ++A+R+D + + S G L+E++E + D + + P K + + A +DG Sbjct: 299 TLAARVDSFHESSEGKVGYDLKEEIERKFDKWQE-PPPVKQVKPLPAPLDG 348
>PRP31_XENLA (Q5U5C5) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) Length = 498 Score = 60.8 bits (146), Expect = 3e-09 Identities = 31/111 (27%), Positives = 57/111 (51%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NL+K PA + +LGA++ + P G I+HS + + + AR ++ KC Sbjct: 239 NLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIVQSLPSDLHRKAARLVSAKC 298 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDG 373 ++ASR+D + + G L+E++E + D + + P K + + A +DG Sbjct: 299 TLASRVDSFHENPEGKIGYDLKEEIERKFDKWQE-PPPVKQVKPLPAPLDG 348
>PRP31_BRARE (Q7SXM7) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) Length = 508 Score = 60.8 bits (146), Expect = 3e-09 Identities = 31/111 (27%), Positives = 57/111 (51%) Frame = +2 Query: 41 NLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKC 220 NL+K PA L +LGA++ + P G I+H + + + AR ++ KC Sbjct: 251 NLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQTLPPDLRRKAARLVSAKC 310 Query: 221 SIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDG 373 ++ASR+D + + + G L+E++E + D + + P K + + A +DG Sbjct: 311 TLASRVDSFHESADGKVGYDLKEEIERKFDKWQE-PPPVKQVKPLPAPLDG 360
>PRP31_SCHPO (O42904) Pre-mRNA-splicing factor 31| Length = 518 Score = 40.0 bits (92), Expect = 0.006 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +2 Query: 44 LAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKCS 223 L K PA L LG + + + YG ++ S + + + + R A K + Sbjct: 265 LGKFPACNLPALGKRRLTTIGINNPAVSGDYGFLYMSEIVQKTPPDVRKQAIRMTAAKVA 324 Query: 224 IASRIDCYSDMSSSIFGEKLREQVEERLD 310 +A+RID + FG R++VE +++ Sbjct: 325 LAARIDSIHEYPDGSFGISARKEVERKIE 353
>DDX25_MOUSE (Q9QY15) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 484 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +2 Query: 254 MSSSIFGEKLREQVEERLD-FYDKGVAPRKNLDVMKAA----IDGLTNTEDDDGKEN 409 M+S ++G ERL+ + V PRKNL +++ IDG NTEDDD E+ Sbjct: 1 MASLLWGGDAGAAESERLNSHFSNLVHPRKNLRGIRSTTVPNIDGSLNTEDDDDDED 57
>CP4F1_RAT (P33274) Cytochrome P450 4F1 (EC 1.14.14.1) (CYPIVF1) (P450-A3)| Length = 524 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +2 Query: 251 DMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDGLTNTEDDDGKENGDASV 424 + + ++ E+ R ++ LD + K A K LD ID L T+D+DGKE D + Sbjct: 265 EFTDAVIRERRRTLPDQGLDEFLKSKAKSKTLDF----IDVLLLTKDEDGKELSDEDI 318
>TOP2_BOMMO (O16140) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| (TOPOII) Length = 1547 Score = 30.8 bits (68), Expect = 3.4 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 2/83 (2%) Frame = +2 Query: 167 RASTKNKGRMARYLANKCSIASRIDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNL 346 +A AR++ KC D I +K + VEE + +G AP Sbjct: 1048 QAEADKLSNQARFILKKC----------DKGLVIENKKRKAMVEELIK---RGYAPDPIA 1094 Query: 347 DVMKAA--IDGLTNTEDDDGKEN 409 D K A I GLT EDDD +E+ Sbjct: 1095 DWKKRASKIQGLTALEDDDAQES 1117
>Y740_RICPR (O05961) Hypothetical UPF0053 protein RP740| Length = 303 Score = 30.8 bits (68), Expect = 3.4 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = +2 Query: 89 KALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLANKCSIASRIDCYSDMSSSI 268 K LF+AL T+ N+P LI I S K +A+ + IA +D Y + Sbjct: 129 KDLFKALATKQNSPLKRLI-RKHIIAAPSMKLLDLLAKMRRERTHIAIVVDEYGGTDGLV 187 Query: 269 FGEKLREQVEERLD 310 E L E++ R+D Sbjct: 188 TIEDLIEEIVGRID 201
>DDX25_RAT (Q9QY16) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 30.4 bits (67), Expect = 4.5 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Frame = +2 Query: 254 MSSSIFGEKLREQVEERLD-FYDKGVAPRKNLDVMKAA----IDGLTNTEDDDGKEN 409 M+S ++G ERL+ + V PRKNL +++ IDG NTE+DD +++ Sbjct: 1 MASLLWGGDAGAAESERLNSHFSNLVHPRKNLRGIRSTTVPNIDGSLNTEEDDDEDD 57
>WDR19_MOUSE (Q3UGF1) WD-repeat protein 19| Length = 1341 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Frame = -3 Query: 162 IKDEWNMRPYFGVFPRVLRALKSAFSAPSIC-----RVEAGHFARLKDCQHEPRAE 10 +KD+W M P+ G FP + K ++ S C R+ + ++ DC R E Sbjct: 1285 LKDDWTMCPHCG-FPALYSEFKILLNSESTCPMCSERLNSSQLKKITDCSQYLRTE 1339
>PNO_EUGGR (Q94IN5) Pyruvate dehydrogenase [NADP+], mitochondrial precursor| (EC 1.2.1.51) (EC 1.16.1.5) (Pyruvate:NADP+ oxidoreductase) (EgPNOmt) (Aquacobalamin reductase [NADPH]) Length = 1803 Score = 29.6 bits (65), Expect = 7.6 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 24 HAGSLSILQNALPLLCRYWVLKRHSLELLKHVETHRS 134 HA +++ Q +LC + V + H + L+ HV T +S Sbjct: 191 HADVMAVRQTGWAMLCSHTVQQSHDMALISHVATLKS 227
>CP4FE_MOUSE (Q9EP75) Cytochrome P450 4F14 (EC 1.14.13.30) (Leukotriene-B4| omega-hydroxylase) (Leukotriene-B4 20-monooxygenase) (Cytochrome P450-LTB-omega) (Cyp4f-14) Length = 524 Score = 29.6 bits (65), Expect = 7.6 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +2 Query: 251 DMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDGLTNTEDDDGKENGDASV 424 + + ++ E+ R ++ LD + K A K LD ID L ++D+DGKE D + Sbjct: 265 EFTDAVIRERHRTLPDQGLDDFLKSKAKSKTLDF----IDVLLLSKDEDGKELSDEDI 318
>CP4FB_HUMAN (Q9HBI6) Cytochrome P450 4F11 (EC 1.14.14.1) (CYPIVF11)| Length = 524 Score = 29.6 bits (65), Expect = 7.6 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = +2 Query: 251 DMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDGLTNTEDDDGKENGDASV 424 D + ++ E+ R + +D + K A K LD ID L ++D+DGKE D + Sbjct: 265 DFTDAVIQERRRTLPTQGIDDFLKNKAKSKTLDF----IDVLLLSKDEDGKELSDEDI 318
>STS1_SCHPO (P36209) Delta(24(24(1)))-sterol reductase (EC 1.3.1.71) (Sterol| delta(24(28))-reductase) (C-24(28) sterol reductase) Length = 453 Score = 29.3 bits (64), Expect = 10.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -1 Query: 266 WSCSYLNSSQYVKQWNICLPGIEPFF 189 W+CS N SQ++K + + G + FF Sbjct: 34 WACSKFNDSQFIKPESFTIAGFQNFF 59
>ZCHC6_MOUSE (Q5BLK4) Zinc finger CCHC domain-containing protein 6| Length = 1491 Score = 29.3 bits (64), Expect = 10.0 Identities = 13/53 (24%), Positives = 26/53 (49%) Frame = +2 Query: 236 IDCYSDMSSSIFGEKLREQVEERLDFYDKGVAPRKNLDVMKAAIDGLTNTEDD 394 + CY D S +I ++ RE + + L+ + K P L + ++ +G + D Sbjct: 1002 VQCYKDFSPTIVEDQAREHIRQNLESFIKQDFPGTKLSLFGSSKNGFGFKQSD 1054 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,660,802 Number of Sequences: 219361 Number of extensions: 1240494 Number of successful extensions: 3488 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3488 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
