| Clone Name | bags7g23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M11, full insert sequence Length = 1427 Score = 670 bits (338), Expect = 0.0 Identities = 506/562 (90%) Strand = Plus / Plus Query: 7 tgcaccttccttgttgccgggggcgtgtcatcctttgcattgttgaaaacaagctcgaag 66 ||||||||||||||||| ||||| || ||||||||||| |||||||| |||||||| ||| Sbjct: 541 tgcaccttccttgttgctgggggtgtatcatcctttgcgttgttgaagacaagctccaag 600 Query: 67 actatcaagaagcttgctaaccctaatgctcctcttggctacggattgtgcttcctcaac 126 ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct: 601 actatcaagaagcttgctaaccctaatgcgcctctgggctacacattgtgcttcctcaac 660 Query: 127 ttagcttttgatggctacactaactcgacccaagatttaatcaagtcccggtaccccaag 186 |||||||||||||| ||||| || |||||||||||||| || ||||| |||| || ||| Sbjct: 661 ttagcttttgatggttacaccaattcgacccaagatttgataaagtctaggtatccaaag 720 Query: 187 actaacccttgggatataatgcttggcatgaacctctggggaaccatatacaatactgta 246 ||||| || ||||||||||||||||||||||| |||||||| |||| ||||||| |||| Sbjct: 721 actaatccatgggatataatgcttggcatgaatctctgggggaccacatacaatgctgtg 780 Query: 247 attatgtttgtggcgcctttactgtttagtaactggccatacgcaaacggttttgaggcg 306 ||||||||||| || || ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 781 attatgtttgttgctccattactattcagtaattggccttacgccaacggttttgaggca 840 Query: 307 gtgagtttttgccgggagaacccagaggtggcctgggacattctcatgttctgcctatgc 366 ||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 841 gtgagattttgccaggagaacccagaggtggcatgggacattctcctgttctgcctgtgt 900 Query: 367 ggtgccgtgggtcagaattttatcttcctaaccatcagccgattcggttctcttactaac 426 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 901 ggtgccgtgggtcagaatttcatcttcctaaccatcagccgatttggctctcttactaac 960 Query: 427 actaccatcaccaccacccgcaagttcatgagcatcgtcatctcatcagttatcagtggt 486 ||||||||||||||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 961 actaccatcaccaccacccgcaagttcatgagcattgtcatctcctccgtcatcagtggt 1020 Query: 487 aacccactgtccatggagcaatggggaagtgttgtgatggtcttttctggcctctctctc 546 |||||||| ||| || |||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1021 aacccactctccttgaagcaatggggaagtgttgtgatggtcttttctggtctctcttta 1080 Query: 547 caaatatatctcaaatggaaga 568 ||||| | |||||||||||||| Sbjct: 1081 caaatctttctcaaatggaaga 1102
>dbj|AK060274.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-G07, full insert sequence Length = 1433 Score = 670 bits (338), Expect = 0.0 Identities = 506/562 (90%) Strand = Plus / Plus Query: 7 tgcaccttccttgttgccgggggcgtgtcatcctttgcattgttgaaaacaagctcgaag 66 |||||||| |||||||| ||||| || ||||||||||| |||||||| |||||||| ||| Sbjct: 540 tgcacctttcttgttgctgggggtgtatcatcctttgcgttgttgaagacaagctccaag 599 Query: 67 actatcaagaagcttgctaaccctaatgctcctcttggctacggattgtgcttcctcaac 126 ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct: 600 actatcaagaagcttgctaaccctaatgcgcctctgggctacacattgtgcttcctcaac 659 Query: 127 ttagcttttgatggctacactaactcgacccaagatttaatcaagtcccggtaccccaag 186 |||||||||||||| ||||| || |||||||||||||| || ||||| |||| || ||| Sbjct: 660 ttagcttttgatggttacaccaattcgacccaagatttgataaagtctaggtatccaaag 719 Query: 187 actaacccttgggatataatgcttggcatgaacctctggggaaccatatacaatactgta 246 ||||| || ||||||||||||||||||||||| |||||||| |||||||||||| |||| Sbjct: 720 actaatccatgggatataatgcttggcatgaatctctgggggaccatatacaatgctgtg 779 Query: 247 attatgtttgtggcgcctttactgtttagtaactggccatacgcaaacggttttgaggcg 306 ||||||||||| || || ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 780 attatgtttgttgctccattactattcagtaattggccttacgccaacggttttgaggca 839 Query: 307 gtgagtttttgccgggagaacccagaggtggcctgggacattctcatgttctgcctatgc 366 ||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 840 gtgagattttgccaggagaacccagaggtggcatgggacattctcctgttctgcctgtgt 899 Query: 367 ggtgccgtgggtcagaattttatcttcctaaccatcagccgattcggttctcttactaac 426 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 900 ggtgccgtgggtcagaatttcatcttcctaaccatcagccgatttggctctcttactaac 959 Query: 427 actaccatcaccaccacccgcaagttcatgagcatcgtcatctcatcagttatcagtggt 486 ||||||||||||||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 960 actaccatcaccaccacccgcaagttcatgagcattgtcatctcctccgtcatcagtggt 1019 Query: 487 aacccactgtccatggagcaatggggaagtgttgtgatggtcttttctggcctctctctc 546 |||||||| ||| || |||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1020 aacccactctccttgaagcaatggggaagtgttgtgatggtcttttctggtctctcttta 1079 Query: 547 caaatatatctcaaatggaaga 568 ||||| | |||||||||||||| Sbjct: 1080 caaatctttctcaaatggaaga 1101
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 478 bits (241), Expect = e-131 Identities = 349/385 (90%) Strand = Plus / Plus Query: 184 aagactaacccttgggatataatgcttggcatgaacctctggggaaccatatacaatact 243 |||||||| || ||||||||||||||||||||||| |||||||| |||||||||||| || Sbjct: 22922658 aagactaatccatgggatataatgcttggcatgaatctctgggggaccatatacaatgct 22922717 Query: 244 gtaattatgtttgtggcgcctttactgtttagtaactggccatacgcaaacggttttgag 303 || ||||||||||| || || ||||| || ||||| ||||| ||||| |||||||||||| Sbjct: 22922718 gtgattatgtttgttgctccattactattcagtaattggccttacgccaacggttttgag 22922777 Query: 304 gcggtgagtttttgccgggagaacccagaggtggcctgggacattctcatgttctgccta 363 || ||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| Sbjct: 22922778 gcagtgagattttgccaggagaacccagaggtggcatgggacattctcctgttctgcctg 22922837 Query: 364 tgcggtgccgtgggtcagaattttatcttcctaaccatcagccgattcggttctcttact 423 || |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 22922838 tgtggtgccgtgggtcagaatttcatcttcctaaccatcagccgatttggctctcttact 22922897 Query: 424 aacactaccatcaccaccacccgcaagttcatgagcatcgtcatctcatcagttatcagt 483 |||||||||||||||||||||||||||||||||||||| |||||||| || || |||||| Sbjct: 22922898 aacactaccatcaccaccacccgcaagttcatgagcattgtcatctcctccgtcatcagt 22922957 Query: 484 ggtaacccactgtccatggagcaatggggaagtgttgtgatggtcttttctggcctctct 543 ||||||||||| ||| || |||||||||||||||||||||||||||||||||| |||||| Sbjct: 22922958 ggtaacccactctccttgaagcaatggggaagtgttgtgatggtcttttctggtctctct 22923017 Query: 544 ctccaaatatatctcaaatggaaga 568 | ||||| | |||||||||||||| Sbjct: 22923018 ttacaaatctttctcaaatggaaga 22923042 Score = 157 bits (79), Expect = 5e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 55 acaagctcgaagactatcaagaagcttgctaaccctaatgctcctcttggctacggattg 114 |||||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 22922439 acaagctccaagactatcaagaagcttgctaaccctaatgcgcctctgggctacacattg 22922498 Query: 115 tgcttcctcaacttagcttttgatggctacactaactcgacccaagatttaatcaagtc 173 |||||||||||||||||||||||||| ||||| || |||||||||||||| || ||||| Sbjct: 22922499 tgcttcctcaacttagcttttgatggttacaccaattcgacccaagatttgataaagtc 22922557 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 7 tgcaccttccttgttgccgggggcgtgtcatcctttgcattgttgaa 53 |||||||| |||||||| ||||| || ||||||||||| |||||||| Sbjct: 22922081 tgcacctttcttgttgctgggggtgtatcatcctttgcgttgttgaa 22922127
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 478 bits (241), Expect = e-131 Identities = 349/385 (90%) Strand = Plus / Plus Query: 184 aagactaacccttgggatataatgcttggcatgaacctctggggaaccatatacaatact 243 |||||||| || ||||||||||||||||||||||| |||||||| |||||||||||| || Sbjct: 97480 aagactaatccatgggatataatgcttggcatgaatctctgggggaccatatacaatgct 97539 Query: 244 gtaattatgtttgtggcgcctttactgtttagtaactggccatacgcaaacggttttgag 303 || ||||||||||| || || ||||| || ||||| ||||| ||||| |||||||||||| Sbjct: 97540 gtgattatgtttgttgctccattactattcagtaattggccttacgccaacggttttgag 97599 Query: 304 gcggtgagtttttgccgggagaacccagaggtggcctgggacattctcatgttctgccta 363 || ||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| Sbjct: 97600 gcagtgagattttgccaggagaacccagaggtggcatgggacattctcctgttctgcctg 97659 Query: 364 tgcggtgccgtgggtcagaattttatcttcctaaccatcagccgattcggttctcttact 423 || |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 97660 tgtggtgccgtgggtcagaatttcatcttcctaaccatcagccgatttggctctcttact 97719 Query: 424 aacactaccatcaccaccacccgcaagttcatgagcatcgtcatctcatcagttatcagt 483 |||||||||||||||||||||||||||||||||||||| |||||||| || || |||||| Sbjct: 97720 aacactaccatcaccaccacccgcaagttcatgagcattgtcatctcctccgtcatcagt 97779 Query: 484 ggtaacccactgtccatggagcaatggggaagtgttgtgatggtcttttctggcctctct 543 ||||||||||| ||| || |||||||||||||||||||||||||||||||||| |||||| Sbjct: 97780 ggtaacccactctccttgaagcaatggggaagtgttgtgatggtcttttctggtctctct 97839 Query: 544 ctccaaatatatctcaaatggaaga 568 | ||||| | |||||||||||||| Sbjct: 97840 ttacaaatctttctcaaatggaaga 97864 Score = 157 bits (79), Expect = 5e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 55 acaagctcgaagactatcaagaagcttgctaaccctaatgctcctcttggctacggattg 114 |||||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 97261 acaagctccaagactatcaagaagcttgctaaccctaatgcgcctctgggctacacattg 97320 Query: 115 tgcttcctcaacttagcttttgatggctacactaactcgacccaagatttaatcaagtc 173 |||||||||||||||||||||||||| ||||| || |||||||||||||| || ||||| Sbjct: 97321 tgcttcctcaacttagcttttgatggttacaccaattcgacccaagatttgataaagtc 97379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 7 tgcaccttccttgttgccgggggcgtgtcatcctttgcattgttgaa 53 |||||||| |||||||| ||||| || ||||||||||| |||||||| Sbjct: 96903 tgcacctttcttgttgctgggggtgtatcatcctttgcgttgttgaa 96949
>gb|AY110443.1| Zea mays CL17797_1 mRNA sequence Length = 800 Score = 472 bits (238), Expect = e-130 Identities = 474/553 (85%), Gaps = 1/553 (0%) Strand = Plus / Minus Query: 16 cttgttgccgggggcgtgtcatcctttgcattgttgaaaacaagctcgaagactatcaag 75 |||||||| || || ||||| |||||||| |||||||| |||||||| ||||| | ||| Sbjct: 797 cttgttgctggcggtgtgtcctcctttgcgttgttgaagacaagctccaagacagttaag 738 Query: 76 aagcttgctaaccctaatgctcctcttggctacggattgtgcttcctcaacttagctttt 135 ||||||| ||||||||||| ||| ||||||| ||||||||||||||||||||||||| Sbjct: 737 aagcttgtcaaccctaatgcaccttttggctatacattgtgcttcctcaacttagctttt 678 Query: 136 gatggctacactaactcgacccaagatttaatcaagtcccggtaccccaagactaaccct 195 ||||| || | ||||||||||||||||||||| ||||| ||||||| |||||||| || Sbjct: 677 gatgggtata-taactcgacccaagatttaataaagtcaaggtacccaaagactaatcca 619 Query: 196 tgggatataatgcttggcatgaacctctggggaaccatatacaatactgtaattatgttt 255 |||||||||||||||||||||||||||| |||||||| ||| ||||| |||||||| Sbjct: 618 tgggatataatgcttggcatgaacctctnnnnnaccatatataatgctgtagttatgttt 559 Query: 256 gtggcgcctttactgtttagtaactggccatacgcaaacggttttgaggcggtgagtttt 315 || ||||| ||||| || |||||||||||||| ||||| ||||| ||||| |||| ||| Sbjct: 558 gttgcgccattactattcagtaactggccatatgcaaatggtttcgaggcattgagattt 499 Query: 316 tgccgggagaacccagaggtggcctgggacattctcatgttctgcctatgcggtgccgtg 375 |||| |||||||||||||||||||||||||||| || ||||||||||||| || |||||| Sbjct: 498 tgccaggagaacccagaggtggcctgggacattttcctgttctgcctatgtggcgccgtg 439 Query: 376 ggtcagaattttatcttcctaaccatcagccgattcggttctcttactaacactaccatc 435 || |||||||| |||||| ||||||||||| | ||||| ||||||||||||| || ||| Sbjct: 438 gggcagaatttcatcttcttaaccatcagcaggttcggcgctcttactaacacaacgatc 379 Query: 436 accaccacccgcaagttcatgagcatcgtcatctcatcagttatcagtggtaacccactg 495 || |||||||| || ||||||||||| || | ||||| || |||||||| || ||| | Sbjct: 378 actaccacccgtaaattcatgagcattgtggtttcatccgtcatcagtggcaatccatta 319 Query: 496 tccatggagcaatggggaagtgttgtgatggtcttttctggcctctctctccaaatatat 555 || || |||||||||| ||||||||||||||||| | ||||||||| ||||||||||| Sbjct: 318 tctttgaagcaatggggtagtgttgtgatggtcttcttaggcctctctatccaaatatat 259 Query: 556 ctcaaatggaaga 568 ||||||||||||| Sbjct: 258 ctcaaatggaaga 246
>gb|AC149601.3| Medicago truncatula chromosome 7 BAC clone mth2-28b24, complete sequence Length = 112486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 367 ggtgccgtgggtcagaattttatcttcctaaccatcagccgattcggttctcttactaac 426 ||||||||||| ||||| ||||||||| | ||||| ||||| || || ||| | ||||| Sbjct: 97425 ggtgccgtgggacagaactttatcttcttgaccataagccggtttggctctttagctaac 97484 Query: 427 actaccatcaccaccacccgcaa 449 ||||||||||| ||||| ||||| Sbjct: 97485 actaccatcacgaccactcgcaa 97507 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 194 cttgggatataatgcttggcatgaacctctggggaaccatatacaata 241 |||||| ||| ||| | |||||||| | ||||||||||||||||||| Sbjct: 97273 cttggggtattatgttgggcatgaatttatggggaaccatatacaata 97320
>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE Length = 136545 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 367 ggtgccgtgggtcagaattttatcttcctaaccatcagccgattcggttctcttactaac 426 ||||||||||| ||||| ||||||||| | ||||| ||||| || || ||| | ||||| Sbjct: 104847 ggtgccgtgggacagaactttatcttcttgaccataagccggtttggctctttagctaac 104788 Query: 427 actaccatcaccaccacccgcaa 449 ||||||||||| ||||| ||||| Sbjct: 104787 actaccatcacgaccactcgcaa 104765 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 194 cttgggatataatgcttggcatgaacctctggggaaccatatacaata 241 |||||| ||| ||| | |||||||| | ||||||||||||||||||| Sbjct: 104999 cttggggtattatgttgggcatgaatttatggggaaccatatacaata 104952
>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete sequence Length = 124895 Score = 60.0 bits (30), Expect = 8e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| | | ||| || ||||| || ||||| ||||| || || ||||||||| Sbjct: 25177 tgggacattcttctttactgtctgtgcggcgctgtgggacagaacttcattttcctaacc 25236 Query: 400 atcagccgattcggttctcttactaacactaccatcaccaccacccgcaagttcatgagc 459 || || ||||| |||||||| || ||||| |||||||| || || |||||||| ||||| Sbjct: 25237 attagtcgatttggttctctgaccaacacaaccatcactacaactcgcaagtttgtgagc 25296 Query: 460 at 461 || Sbjct: 25297 at 25298
>gb|AC145120.1| Solanum demissum chromosome 5 BAC PGEC446O19 genomic sequence, complete sequence Length = 122450 Score = 60.0 bits (30), Expect = 8e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 364 tgcggtgccgtgggtcagaattttatcttcctaaccatcagccgattcggttctcttact 423 ||||| || ||||| ||||| || || ||||||||||| || ||||| |||||||| || Sbjct: 62345 tgcggcgctgtgggacagaacttcattttcctaaccattagtcgatttggttctctgacc 62286 Query: 424 aacactaccatcaccaccacccgcaagttcatgagcat 461 ||||| |||||||| || || |||||||| ||||||| Sbjct: 62285 aacacaaccatcactacaactcgcaagtttgtgagcat 62248
>ref|NM_101303.2| Arabidopsis thaliana pyrimidine nucleotide sugar transporter AT1G14360 mRNA, complete cds Length = 1852 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| |||||| | ||||| |||||||| || ||||| | ||||||||||||| Sbjct: 713 ggtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatat 772 Query: 236 acaa 239 |||| Sbjct: 773 acaa 776 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 856 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 915 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 916 ataagcagattcgggtctctagctaacacgaccataaccac 956
>gb|AY114599.1| Arabidopsis thaliana unknown protein (At1g14360) mRNA, complete cds Length = 1053 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| |||||| | ||||| |||||||| || ||||| | ||||||||||||| Sbjct: 590 ggtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatat 649 Query: 236 acaa 239 |||| Sbjct: 650 acaa 653 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 733 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 792 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 793 ataagcagattcgggtctctagctaacacgaccataaccac 833
>gb|AY059942.1| Arabidopsis thaliana Unknown protein (At1g14360; F14L17.13) mRNA, complete cds Length = 1304 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| |||||| | ||||| |||||||| || ||||| | ||||||||||||| Sbjct: 713 ggtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatat 772 Query: 236 acaa 239 |||| Sbjct: 773 acaa 776 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 856 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 915 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 916 ataagcagattcgggtctctagctaacacgaccataaccac 956
>gb|AF332450.1| Arabidopsis thaliana clone C00151 (e) unknown protein (At1g14360) mRNA, complete cds Length = 996 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| |||||| | ||||| |||||||| || ||||| | ||||||||||||| Sbjct: 590 ggtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatat 649 Query: 236 acaa 239 |||| Sbjct: 650 acaa 653 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 733 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 792 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 793 ataagcagattcgggtctctagctaacacgaccataaccac 833
>gb|AY088469.1| Arabidopsis thaliana clone 6937 mRNA, complete sequence Length = 1288 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| |||||| | ||||| |||||||| || ||||| | ||||||||||||| Sbjct: 684 ggtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatat 743 Query: 236 acaa 239 |||| Sbjct: 744 acaa 747 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 827 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 886 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 887 ataagcagattcgggtctctagctaacacgaccataaccac 927
>gb|AF250341.1|AF250341 Arabidopsis thaliana putative UDP-galactose transporter MSS4 (F14L17.13) mRNA, partial cds Length = 691 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| |||||| | ||||| |||||||| || ||||| | ||||||||||||| Sbjct: 170 ggtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatat 229 Query: 236 acaa 239 |||| Sbjct: 230 acaa 233 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 313 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 372 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 373 ataagcagattcgggtctctagctaacacgaccataaccac 413
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| |||||| | ||||| |||||||| || ||||| | ||||||||||||| Sbjct: 42847 ggtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatat 42788 Query: 236 acaa 239 |||| Sbjct: 42787 acaa 42784 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 42704 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 42645 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 42644 ataagcagattcgggtctctagctaacacgaccataaccac 42604
>emb|BX818693.1|CNS0ACLM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1200 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 177 gtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatata 236 ||||||||| |||||| | ||||| |||||||| || ||||| | |||||||||||||| Sbjct: 654 gtaccccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatata 713 Query: 237 caa 239 ||| Sbjct: 714 caa 716
>emb|BX816440.1|CNS0AD7D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 179 accccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatataca 238 ||||||| |||||| | ||||| |||||||| || ||||| | |||||||||||||||| Sbjct: 674 accccaaaactaacgcatgggacataatgctgggaatgaatttatggggaaccatataca 733 Query: 239 a 239 | Sbjct: 734 a 734 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 814 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 873 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 874 ataagcagattcgggtctctagctaacacgaccataaccac 914
>gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome 5, complete sequence Length = 193583 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 422 ctaacactaccatcaccaccaccc 445 |||||||||||||||||||||||| Sbjct: 20232 ctaacactaccatcaccaccaccc 20255
>gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, complete sequence Length = 167334 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 422 ctaacactaccatcaccaccaccc 445 |||||||||||||||||||||||| Sbjct: 79499 ctaacactaccatcaccaccaccc 79522
>gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, complete sequence Length = 195576 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 419 ttactaacactaccatcaccaccaccc 445 |||||| |||||||||||||||||||| Sbjct: 46549 ttactaccactaccatcaccaccaccc 46575 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 ttactaacactaccatcaccacca 442 |||||| ||||||||||||||||| Sbjct: 46486 ttactaccactaccatcaccacca 46509 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 46403 actaccactaccatcaccaccacc 46426 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 45913 actaccactaccatcaccaccacc 45936
>gb|DQ214606.1| Taeniopygia guttata clone 0058P0014F07 UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter-like mRNA, complete sequence Length = 1356 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 432 catcaccaccacccgcaagttc 453 |||||||||||||||||||||| Sbjct: 877 catcaccaccacccgcaagttc 898
>gb|DQ214605.1| Taeniopygia guttata clone 0058P0062H10 UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter-like mRNA, complete sequence Length = 1345 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 432 catcaccaccacccgcaagttc 453 |||||||||||||||||||||| Sbjct: 866 catcaccaccacccgcaagttc 887
>emb|CT010587.5| Mouse DNA sequence from clone RP23-307A6 on chromosome 17, complete sequence Length = 173949 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 gaacccagaggtggcctgggac 345 |||||||||||||||||||||| Sbjct: 40011 gaacccagaggtggcctgggac 40032
>emb|Z82217.1|HS78B3 Human DNA sequence from clone RP1-78B3 on chromosome 22, complete sequence Length = 73031 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 ccagaggtggcctgggacattctcat 353 |||||| ||||||||||||||||||| Sbjct: 56507 ccagagctggcctgggacattctcat 56482
>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence Length = 191684 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 ccagaggtggcctgggacattctcat 353 |||||| ||||||||||||||||||| Sbjct: 184112 ccagagctggcctgggacattctcat 184137
>emb|BX817240.1|CNS0AD4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1263 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Plus Query: 176 ggtaccccaagactaacccttgggatataatgcttggcatgaacctctggggaaccatat 235 |||||||||| ||| || | ||| | |||||||| || |||||| | ||||||||||||| Sbjct: 665 ggtaccccaacactcacgcatggaacataatgctgggaatgaacttatggggaaccatat 724 Query: 236 ac 237 || Sbjct: 725 ac 726
>gb|AC154790.2| Mus musculus BAC clone RP24-481A4 from 17, complete sequence Length = 194675 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 gaacccagaggtggcctgggac 345 |||||||||||||||||||||| Sbjct: 11060 gaacccagaggtggcctgggac 11081
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 ttgaaaacaagctcgaagactatca 73 ||||||||||||| ||||||||||| Sbjct: 109622 ttgaaaacaagctggaagactatca 109598
>gb|DQ214604.1| Taeniopygia guttata clone 0058P0013E09 UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter-like mRNA, complete sequence Length = 1330 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 catcaccaccacccgcaagtt 452 ||||||||||||||||||||| Sbjct: 852 catcaccaccacccgcaagtt 872
>gb|BT015974.1| Drosophila melanogaster RE74713 full insert cDNA Length = 3887 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 608 aacactaccatcaccaccacc 628
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 498993 aacactaccatcaccaccacc 498973
>gb|AC137679.11| Mus musculus chromosome 12, clone RP23-302N13, complete sequence Length = 186273 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 420 tactaacactaccatcaccaccacc 444 ||||||||| ||||||||||||||| Sbjct: 162468 tactaacaccaccatcaccaccacc 162492
>gb|AC092245.2| Drosophila melanogaster clone BACR32C03, complete sequence Length = 128623 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 295 ggttttgaggcggtgagtttttgcc 319 |||||||||||||||||||| |||| Sbjct: 122057 ggttttgaggcggtgagtttgtgcc 122033
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 134379 aacactaccatcaccaccacc 134399
>ref|NM_166164.2| Drosophila melanogaster Vacuolar H+ ATPase 44kD C subunit CG8048-RD, transcript variant D (Vha44), mRNA Length = 3055 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 608 aacactaccatcaccaccacc 628
>ref|NM_166163.1| Drosophila melanogaster Vacuolar H+ ATPase 44kD C subunit CG8048-RC, transcript variant C (Vha44), mRNA Length = 2239 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 608 aacactaccatcaccaccacc 628
>gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, complete sequence Length = 195510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 187464 aacactaccatcaccaccacc 187484
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 ggttttgaggcggtgagtttttgcc 319 |||||||||||||||||||| |||| Sbjct: 159178 ggttttgaggcggtgagtttgtgcc 159202
>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone BACR25I17, complete sequence Length = 157835 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 91627 aacactaccatcaccaccacc 91607
>emb|BX815894.1|CNS0AD6L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 340 tgggacattctcatgttctgcctatgcggtgccgtgggtcagaattttatcttcctaacc 399 ||||||||||| |||| ||| |||||||||| || || || || || |||||| | || Sbjct: 819 tgggacattcttatgtactgtttatgcggtgcagtaggccaaaacttcatcttcttgaca 878 Query: 400 atcagccgattcggttctcttactaacactaccatcaccac 440 || ||| ||||||| ||||| ||||||| ||||| ||||| Sbjct: 879 ataagcagattcgggtctctagctaacacgaccataaccac 919
>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone BACR17I17, complete sequence Length = 159640 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 68177 aacactaccatcaccaccacc 68157
>gb|AC135112.5| Mus musculus BAC clone RP23-477F17 from chromosome unknown, complete sequence Length = 178498 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 156377 aacactaccatcaccaccacc 156397
>gb|AC154008.1| Mus musculus 6 BAC RP24-470H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 139613 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 527 tcttttctggcctctctctccaaat 551 |||||||||||||||| |||||||| Sbjct: 56371 tcttttctggcctctccctccaaat 56395
>emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on chromosome X, complete sequence Length = 184943 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 125005 aacactaccatcaccaccacc 124985
>emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chromosome 2, complete sequence Length = 166963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 30817 aacactaccatcaccaccacc 30797
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 ggttttgaggcggtgagtttttgcc 319 |||||||||||||||||||| |||| Sbjct: 51018 ggttttgaggcggtgagtttgtgcc 51042
>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete sequence Length = 258223 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aacactaccatcaccaccacc 444 ||||||||||||||||||||| Sbjct: 127242 aacactaccatcaccaccacc 127222
>emb|CT030189.8| Mouse DNA sequence from clone RP24-402B23 on chromosome 12, complete sequence Length = 223910 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 tactaacactaccatcaccaccacc 444 ||||||||| ||||||||||||||| Sbjct: 198240 tactaacaccaccatcaccaccacc 198216
>gb|AC144767.4| Mus musculus BAC clone RP23-82F8 from chromosome 6, complete sequence Length = 229027 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 atggtcttttctggcctctc 542 |||||||||||||||||||| Sbjct: 28943 atggtcttttctggcctctc 28924
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 aatatatctcaaatggaaga 568 |||||||||||||||||||| Sbjct: 207876 aatatatctcaaatggaaga 207857
>gb|AC112938.11| Mus musculus chromosome 5, clone RP24-72E12, complete sequence Length = 235924 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tcagaattttatcttcctaa 397 |||||||||||||||||||| Sbjct: 170718 tcagaattttatcttcctaa 170699
>gb|AC156396.8| Mus musculus 6 BAC RP24-303J2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145666 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 tgatggtcttttctggcctc 540 |||||||||||||||||||| Sbjct: 3190 tgatggtcttttctggcctc 3209
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cactaccatcaccaccaccc 445 |||||||||||||||||||| Sbjct: 169816 cactaccatcaccaccaccc 169797
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cactaccatcaccaccaccc 445 |||||||||||||||||||| Sbjct: 144778 cactaccatcaccaccaccc 144797
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 accatcaccaccacccgcaa 449 |||||||||||||||||||| Sbjct: 190304 accatcaccaccacccgcaa 190285
>gb|AC124588.4| Mus musculus BAC clone RP23-133F15 from chromosome 1, complete sequence Length = 141995 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 527 tcttttctggcctctctctccaaa 550 |||||||||||||||| ||||||| Sbjct: 74231 tcttttctggcctctccctccaaa 74254
>gb|AC123552.4| Mus musculus chromosome 7 clone RP24-396I18, complete sequence Length = 170951 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 ttactaacactaccatcaccacca 442 |||||| ||||||||||||||||| Sbjct: 20801 ttactatcactaccatcaccacca 20778
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 tctcatcagttatcagtggtaacc 490 |||||||||||||||| ||||||| Sbjct: 70468 tctcatcagttatcagaggtaacc 70445
>gb|AC121902.2| Mus musculus BAC clone RP24-168N14 from 8, complete sequence Length = 151290 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 acactaccatcaccaccacc 444 |||||||||||||||||||| Sbjct: 125629 acactaccatcaccaccacc 125610
>gb|AC096909.10| Rattus norvegicus 8 BAC CH230-88B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 241078 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 acactaccatcaccaccacc 444 |||||||||||||||||||| Sbjct: 136955 acactaccatcaccaccacc 136936
>gb|AC023235.24| Homo sapiens 3 BAC RP11-484D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169633 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 atatacaatactgtaattat 251 |||||||||||||||||||| Sbjct: 133748 atatacaatactgtaattat 133729
>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete Sequence, complete sequence Length = 192227 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 atggtcttttctggcctctc 542 |||||||||||||||||||| Sbjct: 117084 atggtcttttctggcctctc 117103
>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence Length = 191467 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 atggtcttttctggcctctc 542 |||||||||||||||||||| Sbjct: 35062 atggtcttttctggcctctc 35081
>gb|DQ057526.1| Antonospora locustae clone 2a09 mRNA sequence Length = 1922 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 ccatggagcaatggggaagtgttg 520 |||||||||||||||||| ||||| Sbjct: 838 ccatggagcaatggggaattgttg 815
>gb|DQ057515.1| Antonospora locustae clone 1k16 mRNA sequence Length = 808 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 ccatggagcaatggggaagtgttg 520 |||||||||||||||||| ||||| Sbjct: 495 ccatggagcaatggggaattgttg 472
>gb|DQ057501.1| Antonospora locustae clone 1f20 mRNA sequence Length = 1075 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 ccatggagcaatggggaagtgttg 520 |||||||||||||||||| ||||| Sbjct: 739 ccatggagcaatggggaattgttg 716
>gb|AC159506.8| Mus musculus 6 BAC RP23-337N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191797 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 acactaccatcaccaccacc 444 |||||||||||||||||||| Sbjct: 108519 acactaccatcaccaccacc 108500
>gb|AC112646.9| Homo sapiens 3 BAC RP11-687B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 38601 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 17652 actatcactaccatcaccaccacc 17675
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 ttttgccgggagaacccagaggtg 336 |||||||||||| ||||||||||| Sbjct: 998131 ttttgccgggagtacccagaggtg 998154
>emb|AL731773.20| Mouse DNA sequence from clone RP23-152G20 on chromosome X, complete sequence Length = 162215 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 tgatggtcttttctggcctc 540 |||||||||||||||||||| Sbjct: 50722 tgatggtcttttctggcctc 50703
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence Length = 191041 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 tactaacactaccatcaccaccac 443 ||||| |||||||||||||||||| Sbjct: 45531 tactatcactaccatcaccaccac 45508
>gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208135 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cactaccatcaccaccaccc 445 |||||||||||||||||||| Sbjct: 188585 cactaccatcaccaccaccc 188604
>gb|AC115115.4| Homo sapiens BAC clone RP11-812M14 from 2, complete sequence Length = 124457 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 actaacactaccatcaccaccacc 444 |||||||| ||||||||||||||| Sbjct: 93165 actaacaccaccatcaccaccacc 93188
>gb|AC103595.2| Homo sapiens chromosome 1 clone RP11-415P10, complete sequence Length = 122000 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 491 cactgtccatggagcaatggggaa 514 |||||||||||| ||||||||||| Sbjct: 99164 cactgtccatggggcaatggggaa 99141
>gb|AC084208.5| Homo sapiens BAC clone RP11-228P15 from 2, complete sequence Length = 141130 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 46745 actatcactaccatcaccaccacc 46722
>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete sequence Length = 228147 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 ttactaacactaccatcaccacca 442 |||||| ||||||||||||||||| Sbjct: 166561 ttactatcactaccatcaccacca 166584
>emb|AL954662.13| Mouse DNA sequence from clone RP23-348L16 on chromosome 2, complete sequence Length = 132427 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tccaaatatatctcaaatgg 564 |||||||||||||||||||| Sbjct: 30190 tccaaatatatctcaaatgg 30171
>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete sequence Length = 192328 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tggagcaatggggaagtgtt 519 |||||||||||||||||||| Sbjct: 119141 tggagcaatggggaagtgtt 119160
>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete sequences Length = 207747 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 98923 actatcactaccatcaccaccacc 98900
>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence Length = 188569 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 aacactaccatcaccaccac 443 |||||||||||||||||||| Sbjct: 125132 aacactaccatcaccaccac 125113
>gb|AC157824.1| Mus musculus BAC clone RP23-265E4 from 1, complete sequence Length = 153577 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 527 tcttttctggcctctctctccaaa 550 |||||||||||||||| ||||||| Sbjct: 13555 tcttttctggcctctccctccaaa 13532
>gb|AC153991.3| Mus musculus 6 BAC RP24-541D10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202289 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 acactaccatcaccaccacc 444 |||||||||||||||||||| Sbjct: 16484 acactaccatcaccaccacc 16465
>dbj|AP004147.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-785K22, complete sequence Length = 97120 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 83987 actaccactaccatcaccaccacc 84010
>gb|AC005243.1|AC005243 Homo sapiens chromosome 17, clone hRPK.1124_B_17, complete sequence Length = 175609 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 170200 actatcactaccatcaccaccacc 170223
>gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complete sequence Length = 153492 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cactaccatcaccaccaccc 445 |||||||||||||||||||| Sbjct: 79391 cactaccatcaccaccaccc 79410
>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete sequence Length = 111590 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cactaccatcaccaccaccc 445 |||||||||||||||||||| Sbjct: 33628 cactaccatcaccaccaccc 33647
>gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, complete sequence Length = 202869 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 tgatggtcttttctggcctc 540 |||||||||||||||||||| Sbjct: 20690 tgatggtcttttctggcctc 20671
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 actaacactaccatcaccaccacc 444 |||| ||||||||||||||||||| Sbjct: 60482 actaccactaccatcaccaccacc 60459
>gb|AC156500.2| Mus musculus BAC clone RP24-126J12 from chromosome 9, complete sequence Length = 152842 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 acactaccatcaccaccacc 444 |||||||||||||||||||| Sbjct: 92094 acactaccatcaccaccacc 92113
>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete sequence Length = 187006 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cactaccatcaccaccaccc 445 |||||||||||||||||||| Sbjct: 69193 cactaccatcaccaccaccc 69174
>dbj|AP000352.2| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1561E1 Length = 152244 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 ttactaacactaccatcaccacca 442 |||||||||| ||||||||||||| Sbjct: 47692 ttactaacacgaccatcaccacca 47669 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,775,738 Number of Sequences: 3902068 Number of extensions: 4775738 Number of successful extensions: 102500 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102109 Number of HSP's gapped (non-prelim): 389 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)