| Clone Name | bags7g14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CT024_MOUSE (Q9CQT9) Protein C20orf24 homolog | 92 | 1e-18 | 2 | CT024_HUMAN (Q9BUV8) Protein C20orf24 (Rab5-interacting protein)... | 81 | 2e-15 |
|---|
>CT024_MOUSE (Q9CQT9) Protein C20orf24 homolog| Length = 129 Score = 92.0 bits (227), Expect = 1e-18 Identities = 38/92 (41%), Positives = 61/92 (66%) Frame = +2 Query: 35 DKDQLLDAVHWIRQAVGLACGLLWGAVPLVGAFWIALFFTISTVIVHLYYAHLLKIDEED 214 DKD+ LD ++W RQ + L G++WG +PL G IA F I+ +++LY+++ L+IDEE+ Sbjct: 37 DKDEFLDVIYWFRQIIALVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96 Query: 215 FGGHAALLQEGLFASFTLFLLSWTLVYSLAHF 310 +GG L +EG SF LF++ W + Y+ H+ Sbjct: 97 YGGTWELTKEGFMTSFALFMVIWIIFYTAIHY 128
>CT024_HUMAN (Q9BUV8) Protein C20orf24 (Rab5-interacting protein) (RIP5)| Length = 137 Score = 81.3 bits (199), Expect = 2e-15 Identities = 35/91 (38%), Positives = 58/91 (63%) Frame = +2 Query: 35 DKDQLLDAVHWIRQAVGLACGLLWGAVPLVGAFWIALFFTISTVIVHLYYAHLLKIDEED 214 DKD+ LD ++W RQ + + G++WG +PL G IA F I+ +++LY+++ L+IDEE+ Sbjct: 37 DKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96 Query: 215 FGGHAALLQEGLFASFTLFLLSWTLVYSLAH 307 +GG L +EG SF LF++ ++ H Sbjct: 97 YGGTWELTKEGFMTSFALFMVCVADSFTTGH 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,611,577 Number of Sequences: 219361 Number of extensions: 1336322 Number of successful extensions: 3171 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3099 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3169 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)