ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK073388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 731 0.0
2dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
4dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
5dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
6ref|NM_120574.3| Arabidopsis thaliana transporter AT5G04920 mRNA... 92 3e-15
7gb|AY096570.1| Arabidopsis thaliana unknown protein (At5g04920) ... 92 3e-15
8gb|AY072089.1| Arabidopsis thaliana unknown protein (At5g04920) ... 92 3e-15
9dbj|AB005245.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
10gb|AC104826.5| Homo sapiens BAC clone RP11-775M3 from 4, complet... 44 0.54
11gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complet... 44 0.54
12gb|AC006458.2| Homo sapiens BAC clone GS1-228E12 from 7, complet... 42 2.1
13dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 42 2.1
14gb|AC011742.3| Homo sapiens BAC clone RP11-214J9 from 2, complet... 42 2.1
15emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chro... 42 2.1
16ref|XM_631064.1| Dictyostelium discoideum hypothetical protein (... 40 8.4
17gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
18gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, com... 40 8.4
19gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC... 40 8.4
20gb|AC135197.1| Rattus norvegicus BAC CH230-348O5 (Children's Hos... 40 8.4
21dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 8.4
22gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.4
23gb|AC134864.5| Mus musculus BAC clone RP24-132O18 from chromosom... 40 8.4
24dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
25gb|AC090806.12| Homo sapiens chromosome 8, clone RP11-94A24, com... 40 8.4
26gb|AC108136.14| Homo sapiens chromosome 8, clone RP11-96B2, comp... 40 8.4
27ref|NM_209662.1| Eremothecium gossypii ADR213Cp (ADR213C), mRNA 40 8.4
28gb|AC152983.2| Mus musculus 10 BAC RP23-17L11 (Roswell Park Canc... 40 8.4
29gb|AC107856.7| Mus musculus chromosome 14, clone RP23-10E23, com... 40 8.4
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
31emb|CT030682.10| Mouse DNA sequence from clone RP23-263O11 on ch... 40 8.4
32gb|AC004057.1|AC004057 Homo sapiens chromosome 4 clone B240N9 ma... 40 8.4
33dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.4

>dbj|AK073388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043F13, full
            insert sequence
          Length = 1744

 Score =  731 bits (369), Expect = 0.0
 Identities = 546/605 (90%)
 Strand = Plus / Plus

                                                                        
Query: 10   ggagagcgcggggcagaacttgcaggatgccttccaggatctcaacgccctcatgagcaa 69
            ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 617  ggagagcgcggggcagaatctgcaggatgccttccaggatctcaacgccctcatgagcaa 676

                                                                        
Query: 70   agccaaggaaatgatggaattggcagagaaaatgaggcaaaagctattgacgaactcatc 129
            ||| |||||||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct: 677  agctaaggaaatgatggagttagcggagaaaatgaggcaaaagctattgacgaactcatc 736

                                                                        
Query: 130  ttctcaatcgaattccaatgacgaagagatgggttctaagcaagacatgcaggatttgct 189
              | ||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||
Sbjct: 737  agcccaatccaattccaatgatgaagagatgggatctaagcaagacatgcaggattggct 796

                                                                        
Query: 190  attgagcgtaggcatcgtgtctcccgtgacaaaggaaactgctggtgctttgtaccatca 249
            |||||| || || |||||||| || ||||| || ||||| ||||||||| ||||||| ||
Sbjct: 797  attgagtgttggaatcgtgtcccctgtgacgaaagaaaccgctggtgctctgtaccacca 856

                                                                        
Query: 250  gcagctttcacgacagctggctgactttgtgagaataccagttgagagagcaggtggtat 309
            |||||| ||||| ||| ||||||||| | | |||| |||| | |||| ||||||||||||
Sbjct: 857  gcagctgtcacgccagttggctgactatattagaacaccactagagaaagcaggtggtat 916

                                                                        
Query: 310  gatggcactagtcgatgtctactgtctcttcaaccgcgctaggggaacagagttgatctc 369
            |||||||||||| |||||||| ||||||| |||||| || || || ||||||||||||||
Sbjct: 917  gatggcactagttgatgtctattgtctctacaaccgtgcaagagggacagagttgatctc 976

                                                                        
Query: 370  accagaggatcttttgcaagcttgctccctttgggagaaatttgatgtcccagtaatgct 429
            ||||||||||||| ||||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 977  accagaggatcttctgcaagcctgttccctttgggagaaatttgacgtcccagtcatgct 1036

                                                                        
Query: 430  ccggaaatttgatagtggagtgaaggtgatccagaccaagacgcatagtgatgatgaggt 489
            | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 caggaaatttgacagtggagtgaaggtgatccagaccaagacgcatagtgatgatgaggt 1096

                                                                        
Query: 490  atttgcaagaatctcatcactcgcgcaaaagccggatgctcttctgaaaggaataagccc 549
            |||||| |||||||||||||| || ||||||  |||||| |||| ||| |||||||||||
Sbjct: 1097 atttgcgagaatctcatcacttgcacaaaaggaggatgcccttcagaagggaataagccc 1156

                                                                        
Query: 550  cagcgacgctgcatttacactggggattgcaccagctttagcaaaggagcatcttctaaa 609
            |||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 1157 cagcgatgctgcatttacacttgggattgcacctgctttagcgaaggagcatcttctaaa 1216

                 
Query: 610  tgcag 614
            |||||
Sbjct: 1217 tgcag 1221



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>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432B10
          Length = 131918

 Score =  218 bits (110), Expect = 2e-53
 Identities = 176/198 (88%)
 Strand = Plus / Minus

                                                                         
Query: 64    gagcaaagccaaggaaatgatggaattggcagagaaaatgaggcaaaagctattgacgaa 123
             ||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 76759 gagcaaagctaaggaaatgatggagttagcggagaaaatgaggcaaaagctattgacgaa 76700

                                                                         
Query: 124   ctcatcttctcaatcgaattccaatgacgaagagatgggttctaagcaagacatgcagga 183
             ||||||  | ||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 76699 ctcatcagcccaatccaattccaatgatgaagagatgggatctaagcaagacatgcagga 76640

                                                                         
Query: 184   tttgctattgagcgtaggcatcgtgtctcccgtgacaaaggaaactgctggtgctttgta 243
             || ||||||||| || || |||||||| || ||||| || ||||| ||||||||| ||||
Sbjct: 76639 ttggctattgagtgttggaatcgtgtcccctgtgacgaaagaaaccgctggtgctctgta 76580

                               
Query: 244   ccatcagcagctttcacg 261
             ||| |||||||| |||||
Sbjct: 76579 ccaccagcagctgtcacg 76562



 Score =  161 bits (81), Expect = 3e-36
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                         
Query: 486   aggtatttgcaagaatctcatcactcgcgcaaaagccggatgctcttctgaaaggaataa 545
             |||||||||| |||||||||||||| || ||||||  |||||| |||| ||| |||||||
Sbjct: 75375 aggtatttgcgagaatctcatcacttgcacaaaaggaggatgcccttcagaagggaataa 75316

                                                                         
Query: 546   gccccagcgacgctgcatttacactggggattgcaccagctttagcaaaggagcatcttc 605
             |||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 75315 gccccagcgatgctgcatttacacttgggattgcacctgctttagcgaaggagcatcttc 75256

                      
Query: 606   taaatgcag 614
             |||||||||
Sbjct: 75255 taaatgcag 75247



 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                         
Query: 418   cccagtaatgctccggaaatttgatagtggagtgaaggtgatccagaccaagacgcatag 477
             |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 75700 cccagtcatgctcaggaaatttgacagtggagtgaaggtgatccagaccaagacgcatag 75641

                          
Query: 478   tgatgatgaggta 490
             |||||||||||||
Sbjct: 75640 tgatgatgaggta 75628



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                    
Query: 10    ggagagcgcggggcagaacttgcaggatgccttccaggatctcaacgccctcatg 64
             ||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 77048 ggagagcgcggggcagaatctgcaggatgccttccaggatctcaacgccctcatg 76994



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 358   agagttgatctcaccagaggatcttttgcaagcttgctccctttgggagaaatttga 414
             ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||
Sbjct: 75869 agagttgatctcaccagaggatcttctgcaagcctgttccctttgggagaaatttga 75813



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 267   tggctgactttgtgagaataccagttgagagagcaggtggtatgatggcactagtcgatg 326
             ||||||||| | | |||| |||| | |||| |||||||||||||||||||||||| ||||
Sbjct: 76044 tggctgactatattagaacaccactagagaaagcaggtggtatgatggcactagttgatg 75985

                                
Query: 327   tctactgtctcttcaaccg 345
             |||| ||||||| ||||||
Sbjct: 75984 tctattgtctctacaaccg 75966



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  218 bits (110), Expect = 2e-53
 Identities = 176/198 (88%)
 Strand = Plus / Minus

                                                                            
Query: 64       gagcaaagccaaggaaatgatggaattggcagagaaaatgaggcaaaagctattgacgaa 123
                ||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 34579465 gagcaaagctaaggaaatgatggagttagcggagaaaatgaggcaaaagctattgacgaa 34579406

                                                                            
Query: 124      ctcatcttctcaatcgaattccaatgacgaagagatgggttctaagcaagacatgcagga 183
                ||||||  | ||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 34579405 ctcatcagcccaatccaattccaatgatgaagagatgggatctaagcaagacatgcagga 34579346

                                                                            
Query: 184      tttgctattgagcgtaggcatcgtgtctcccgtgacaaaggaaactgctggtgctttgta 243
                || ||||||||| || || |||||||| || ||||| || ||||| ||||||||| ||||
Sbjct: 34579345 ttggctattgagtgttggaatcgtgtcccctgtgacgaaagaaaccgctggtgctctgta 34579286

                                  
Query: 244      ccatcagcagctttcacg 261
                ||| |||||||| |||||
Sbjct: 34579285 ccaccagcagctgtcacg 34579268



 Score =  161 bits (81), Expect = 3e-36
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                            
Query: 486      aggtatttgcaagaatctcatcactcgcgcaaaagccggatgctcttctgaaaggaataa 545
                |||||||||| |||||||||||||| || ||||||  |||||| |||| ||| |||||||
Sbjct: 34578081 aggtatttgcgagaatctcatcacttgcacaaaaggaggatgcccttcagaagggaataa 34578022

                                                                            
Query: 546      gccccagcgacgctgcatttacactggggattgcaccagctttagcaaaggagcatcttc 605
                |||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 34578021 gccccagcgatgctgcatttacacttgggattgcacctgctttagcgaaggagcatcttc 34577962

                         
Query: 606      taaatgcag 614
                |||||||||
Sbjct: 34577961 taaatgcag 34577953



 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                            
Query: 418      cccagtaatgctccggaaatttgatagtggagtgaaggtgatccagaccaagacgcatag 477
                |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 34578406 cccagtcatgctcaggaaatttgacagtggagtgaaggtgatccagaccaagacgcatag 34578347

                             
Query: 478      tgatgatgaggta 490
                |||||||||||||
Sbjct: 34578346 tgatgatgaggta 34578334



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                       
Query: 10       ggagagcgcggggcagaacttgcaggatgccttccaggatctcaacgccctcatg 64
                ||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 34579754 ggagagcgcggggcagaatctgcaggatgccttccaggatctcaacgccctcatg 34579700



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                         
Query: 358      agagttgatctcaccagaggatcttttgcaagcttgctccctttgggagaaatttga 414
                ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||
Sbjct: 34578575 agagttgatctcaccagaggatcttctgcaagcctgttccctttgggagaaatttga 34578519



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 267      tggctgactttgtgagaataccagttgagagagcaggtggtatgatggcactagtcgatg 326
                ||||||||| | | |||| |||| | |||| |||||||||||||||||||||||| ||||
Sbjct: 34578750 tggctgactatattagaacaccactagagaaagcaggtggtatgatggcactagttgatg 34578691

                                   
Query: 327      tctactgtctcttcaaccg 345
                |||| ||||||| ||||||
Sbjct: 34578690 tctattgtctctacaaccg 34578672



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>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0085D07
          Length = 172483

 Score =  218 bits (110), Expect = 2e-53
 Identities = 176/198 (88%)
 Strand = Plus / Minus

                                                                         
Query: 64    gagcaaagccaaggaaatgatggaattggcagagaaaatgaggcaaaagctattgacgaa 123
             ||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 31482 gagcaaagctaaggaaatgatggagttagcggagaaaatgaggcaaaagctattgacgaa 31423

                                                                         
Query: 124   ctcatcttctcaatcgaattccaatgacgaagagatgggttctaagcaagacatgcagga 183
             ||||||  | ||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 31422 ctcatcagcccaatccaattccaatgatgaagagatgggatctaagcaagacatgcagga 31363

                                                                         
Query: 184   tttgctattgagcgtaggcatcgtgtctcccgtgacaaaggaaactgctggtgctttgta 243
             || ||||||||| || || |||||||| || ||||| || ||||| ||||||||| ||||
Sbjct: 31362 ttggctattgagtgttggaatcgtgtcccctgtgacgaaagaaaccgctggtgctctgta 31303

                               
Query: 244   ccatcagcagctttcacg 261
             ||| |||||||| |||||
Sbjct: 31302 ccaccagcagctgtcacg 31285



 Score =  161 bits (81), Expect = 3e-36
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                         
Query: 486   aggtatttgcaagaatctcatcactcgcgcaaaagccggatgctcttctgaaaggaataa 545
             |||||||||| |||||||||||||| || ||||||  |||||| |||| ||| |||||||
Sbjct: 30098 aggtatttgcgagaatctcatcacttgcacaaaaggaggatgcccttcagaagggaataa 30039

                                                                         
Query: 546   gccccagcgacgctgcatttacactggggattgcaccagctttagcaaaggagcatcttc 605
             |||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 30038 gccccagcgatgctgcatttacacttgggattgcacctgctttagcgaaggagcatcttc 29979

                      
Query: 606   taaatgcag 614
             |||||||||
Sbjct: 29978 taaatgcag 29970



 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                         
Query: 418   cccagtaatgctccggaaatttgatagtggagtgaaggtgatccagaccaagacgcatag 477
             |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 30423 cccagtcatgctcaggaaatttgacagtggagtgaaggtgatccagaccaagacgcatag 30364

                          
Query: 478   tgatgatgaggta 490
             |||||||||||||
Sbjct: 30363 tgatgatgaggta 30351



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                    
Query: 10    ggagagcgcggggcagaacttgcaggatgccttccaggatctcaacgccctcatg 64
             ||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 31771 ggagagcgcggggcagaatctgcaggatgccttccaggatctcaacgccctcatg 31717



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 358   agagttgatctcaccagaggatcttttgcaagcttgctccctttgggagaaatttga 414
             ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||
Sbjct: 30592 agagttgatctcaccagaggatcttctgcaagcctgttccctttgggagaaatttga 30536



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 267   tggctgactttgtgagaataccagttgagagagcaggtggtatgatggcactagtcgatg 326
             ||||||||| | | |||| |||| | |||| |||||||||||||||||||||||| ||||
Sbjct: 30767 tggctgactatattagaacaccactagagaaagcaggtggtatgatggcactagttgatg 30708

                                
Query: 327   tctactgtctcttcaaccg 345
             |||| ||||||| ||||||
Sbjct: 30707 tctattgtctctacaaccg 30689



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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0425G02
          Length = 155432

 Score =  218 bits (110), Expect = 2e-53
 Identities = 176/198 (88%)
 Strand = Plus / Minus

                                                                          
Query: 64     gagcaaagccaaggaaatgatggaattggcagagaaaatgaggcaaaagctattgacgaa 123
              ||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 155184 gagcaaagctaaggaaatgatggagttagcggagaaaatgaggcaaaagctattgacgaa 155125

                                                                          
Query: 124    ctcatcttctcaatcgaattccaatgacgaagagatgggttctaagcaagacatgcagga 183
              ||||||  | ||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 155124 ctcatcagcccaatccaattccaatgatgaagagatgggatctaagcaagacatgcagga 155065

                                                                          
Query: 184    tttgctattgagcgtaggcatcgtgtctcccgtgacaaaggaaactgctggtgctttgta 243
              || ||||||||| || || |||||||| || ||||| || ||||| ||||||||| ||||
Sbjct: 155064 ttggctattgagtgttggaatcgtgtcccctgtgacgaaagaaaccgctggtgctctgta 155005

                                
Query: 244    ccatcagcagctttcacg 261
              ||| |||||||| |||||
Sbjct: 155004 ccaccagcagctgtcacg 154987



 Score =  161 bits (81), Expect = 3e-36
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                          
Query: 486    aggtatttgcaagaatctcatcactcgcgcaaaagccggatgctcttctgaaaggaataa 545
              |||||||||| |||||||||||||| || ||||||  |||||| |||| ||| |||||||
Sbjct: 153800 aggtatttgcgagaatctcatcacttgcacaaaaggaggatgcccttcagaagggaataa 153741

                                                                          
Query: 546    gccccagcgacgctgcatttacactggggattgcaccagctttagcaaaggagcatcttc 605
              |||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 153740 gccccagcgatgctgcatttacacttgggattgcacctgctttagcgaaggagcatcttc 153681

                       
Query: 606    taaatgcag 614
              |||||||||
Sbjct: 153680 taaatgcag 153672



 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                          
Query: 418    cccagtaatgctccggaaatttgatagtggagtgaaggtgatccagaccaagacgcatag 477
              |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 154125 cccagtcatgctcaggaaatttgacagtggagtgaaggtgatccagaccaagacgcatag 154066

                           
Query: 478    tgatgatgaggta 490
              |||||||||||||
Sbjct: 154065 tgatgatgaggta 154053



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                       
Query: 358    agagttgatctcaccagaggatcttttgcaagcttgctccctttgggagaaatttga 414
              ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||
Sbjct: 154294 agagttgatctcaccagaggatcttctgcaagcctgttccctttgggagaaatttga 154238



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                          
Query: 267    tggctgactttgtgagaataccagttgagagagcaggtggtatgatggcactagtcgatg 326
              ||||||||| | | |||| |||| | |||| |||||||||||||||||||||||| ||||
Sbjct: 154469 tggctgactatattagaacaccactagagaaagcaggtggtatgatggcactagttgatg 154410

                                 
Query: 327    tctactgtctcttcaaccg 345
              |||| ||||||| ||||||
Sbjct: 154409 tctattgtctctacaaccg 154391



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>ref|NM_120574.3| Arabidopsis thaliana transporter AT5G04920 mRNA, complete cds
          Length = 1818

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 106/126 (84%)
 Strand = Plus / Plus

                                                                        
Query: 337  cttcaaccgcgctaggggaacagagttgatctcaccagaggatcttttgcaagcttgctc 396
            ||||||||| ||| | || ||||||||||| || ||||| ||| | | |||||||||  |
Sbjct: 1223 cttcaaccgagctcgtgggacagagttgatttccccagacgatttgtggcaagcttgtac 1282

                                                                        
Query: 397  cctttgggagaaatttgatgtcccagtaatgctccggaaatttgatagtggagtgaaggt 456
            ||| ||||||||||||||||| ||||||||||| ||||| |||||||| || |||| |||
Sbjct: 1283 cctctgggagaaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgatggt 1342

                  
Query: 457  gatcca 462
             |||||
Sbjct: 1343 catcca 1348



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>gb|AY096570.1| Arabidopsis thaliana unknown protein (At5g04920) mRNA, complete cds
          Length = 1353

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 106/126 (84%)
 Strand = Plus / Plus

                                                                        
Query: 337  cttcaaccgcgctaggggaacagagttgatctcaccagaggatcttttgcaagcttgctc 396
            ||||||||| ||| | || ||||||||||| || ||||| ||| | | |||||||||  |
Sbjct: 891  cttcaaccgagctcgtgggacagagttgatttccccagacgatttgtggcaagcttgtac 950

                                                                        
Query: 397  cctttgggagaaatttgatgtcccagtaatgctccggaaatttgatagtggagtgaaggt 456
            ||| ||||||||||||||||| ||||||||||| ||||| |||||||| || |||| |||
Sbjct: 951  cctctgggagaaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgatggt 1010

                  
Query: 457  gatcca 462
             |||||
Sbjct: 1011 catcca 1016



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>gb|AY072089.1| Arabidopsis thaliana unknown protein (At5g04920) mRNA, complete cds
          Length = 1833

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 106/126 (84%)
 Strand = Plus / Plus

                                                                        
Query: 337  cttcaaccgcgctaggggaacagagttgatctcaccagaggatcttttgcaagcttgctc 396
            ||||||||| ||| | || ||||||||||| || ||||| ||| | | |||||||||  |
Sbjct: 1223 cttcaaccgagctcgtgggacagagttgatttccccagacgatttgtggcaagcttgtac 1282

                                                                        
Query: 397  cctttgggagaaatttgatgtcccagtaatgctccggaaatttgatagtggagtgaaggt 456
            ||| ||||||||||||||||| ||||||||||| ||||| |||||||| || |||| |||
Sbjct: 1283 cctctgggagaaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgatggt 1342

                  
Query: 457  gatcca 462
             |||||
Sbjct: 1343 catcca 1348



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>dbj|AB005245.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUG13
          Length = 86630

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 356  acagagttgatctcaccagaggatcttttgcaagcttgctccctttgggagaaatttgat 415
            ||||||||||| || ||||| ||| | | |||||||||  |||| |||||||||||||||
Sbjct: 7198 acagagttgatttccccagacgatttgtggcaagcttgtaccctctgggagaaatttgat 7139

              
Query: 416  gt 417
            ||
Sbjct: 7138 gt 7137



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 419  ccagtaatgctccggaaatttgatagtggagtgaaggtgatcca 462
            ||||||||||| ||||| |||||||| || |||| ||| |||||
Sbjct: 7036 ccagtaatgctgcggaagtttgatagcggtgtgatggtcatcca 6993



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>gb|AC104826.5| Homo sapiens BAC clone RP11-775M3 from 4, complete sequence
          Length = 138604

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 277   tgtgagaataccagttgagagagcag 302
             ||||||||||||||| ||||||||||
Sbjct: 93905 tgtgagaataccagtggagagagcag 93930



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>gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complete sequence
          Length = 193973

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 293   gagagagcaggtggtatgatgg 314
             ||||||||||||||||||||||
Sbjct: 84881 gagagagcaggtggtatgatgg 84860



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>gb|AC006458.2| Homo sapiens BAC clone GS1-228E12 from 7, complete sequence
          Length = 121336

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 397   cctttgggagaaatttgatgt 417
             |||||||||||||||||||||
Sbjct: 48490 cctttgggagaaatttgatgt 48470



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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    agagatgggttctaagcaaga 174
              |||||||||||||||||||||
Sbjct: 559206 agagatgggttctaagcaaga 559226



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>gb|AC011742.3| Homo sapiens BAC clone RP11-214J9 from 2, complete sequence
          Length = 181210

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 594    aggagcatcttctaaatgcag 614
              |||||||||||||||||||||
Sbjct: 155166 aggagcatcttctaaatgcag 155186



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>emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chromosome 4, complete
              sequence
          Length = 153653

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    ccctttgggagaaatttgatg 416
              |||||||||||||||||||||
Sbjct: 117235 ccctttgggagaaatttgatg 117255



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>ref|XM_631064.1| Dictyostelium discoideum hypothetical protein (DDB0219461), partial
            mRNA
          Length = 2190

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   atgatggaattggcagagaa 99
            ||||||||||||||||||||
Sbjct: 1210 atgatggaattggcagagaa 1229



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>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09,
              complete sequence
          Length = 171861

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aaaatgaggcaaaagctatt 117
              ||||||||||||||||||||
Sbjct: 132568 aaaatgaggcaaaagctatt 132549



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>gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, complete sequence
          Length = 199655

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aagccaaggaaatgatggaa 88
             ||||||||||||||||||||
Sbjct: 54460 aagccaaggaaatgatggaa 54479



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>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence,
             complete sequence
          Length = 100887

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    acttgcaggatgccttccag 46
             ||||||||||||||||||||
Sbjct: 39207 acttgcaggatgccttccag 39188



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>gb|AC135197.1| Rattus norvegicus BAC CH230-348O5 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 176608

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ctcatgagcaaagccaagga 78
             ||||||||||||||||||||
Sbjct: 62086 ctcatgagcaaagccaagga 62067



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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     aggaaatgatggaattggca 94
              ||||||||||||||||||||
Sbjct: 297681 aggaaatgatggaattggca 297700



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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
               complete sequence
          Length = 1466886

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 373     agaggatcttttgcaagctt 392
               ||||||||||||||||||||
Sbjct: 1077744 agaggatcttttgcaagctt 1077763



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>gb|AC134864.5| Mus musculus BAC clone RP24-132O18 from chromosome 15, complete
             sequence
          Length = 149797

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   agagttgatctcaccagagg 377
             ||||||||||||||||||||
Sbjct: 72741 agagttgatctcaccagagg 72760



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 98       aaaatgaggcaaaagctatt 117
                ||||||||||||||||||||
Sbjct: 15722887 aaaatgaggcaaaagctatt 15722868



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>gb|AC090806.12| Homo sapiens chromosome 8, clone RP11-94A24, complete sequence
          Length = 131196

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 394  ctccctttgggagaaatttg 413
            ||||||||||||||||||||
Sbjct: 8626 ctccctttgggagaaatttg 8645



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>gb|AC108136.14| Homo sapiens chromosome 8, clone RP11-96B2, complete sequence
          Length = 172124

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    ctccctttgggagaaatttg 413
              ||||||||||||||||||||
Sbjct: 167961 ctccctttgggagaaatttg 167980



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>ref|NM_209662.1| Eremothecium gossypii ADR213Cp (ADR213C), mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 373 agaggatcttttgcaagctt 392
           ||||||||||||||||||||
Sbjct: 946 agaggatcttttgcaagctt 927



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>gb|AC152983.2| Mus musculus 10 BAC RP23-17L11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 224120

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 465    ccaagacgcatagtgatgatgaggtatt 492
              ||||||| ||||||||||||||| ||||
Sbjct: 101261 ccaagacccatagtgatgatgagatatt 101288



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>gb|AC107856.7| Mus musculus chromosome 14, clone RP23-10E23, complete sequence
          Length = 203953

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    gacagctggctgactttgtg 280
              ||||||||||||||||||||
Sbjct: 109833 gacagctggctgactttgtg 109852



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 98       aaaatgaggcaaaagctatt 117
                ||||||||||||||||||||
Sbjct: 15810264 aaaatgaggcaaaagctatt 15810245



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>emb|CT030682.10| Mouse DNA sequence from clone RP23-263O11 on chromosome 14, complete
              sequence
          Length = 144072

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    gacagctggctgactttgtg 280
              ||||||||||||||||||||
Sbjct: 121548 gacagctggctgactttgtg 121567



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>gb|AC004057.1|AC004057 Homo sapiens chromosome 4 clone B240N9 map 4q25, complete sequence
          Length = 152798

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     agagaaaatgaggcaaaagc 113
              ||||||||||||||||||||
Sbjct: 139134 agagaaaatgaggcaaaagc 139153



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>dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1018C4, complete
              sequence
          Length = 174667

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    ctccctttgggagaaatttg 413
              ||||||||||||||||||||
Sbjct: 164618 ctccctttgggagaaatttg 164599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,197,148
Number of Sequences: 3902068
Number of extensions: 5197148
Number of successful extensions: 94205
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94039
Number of HSP's gapped (non-prelim): 166
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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