>HM23_CAEEL (P34663) Homeobox protein ceh-23|
          Length = 305

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
 Frame = -3

Query: 329 LPGLAMPMVSPKTPISRMV-----FPGSSIPNACSLGASPIVTLVHKPSALLRNPSRMSR 165
           +P  +  M+SP  P S  +     FP S   N+  L   P    +  PS L  NPS +  
Sbjct: 41  IPSTSTGMLSPNLPFSATIPRVNLFPPSQPANSLILPTIPAQPFIPNPSLLQANPSAVEA 100

Query: 164 SSRG--ASTTAMSSRTEP 117
            +    A+T+  +S  EP
Sbjct: 101 LANALFATTSRRASCPEP 118

>EMBB_MYCSM (Q50395) Probable arabinosyltransferase B (EC 2.4.2.-)|
          Length = 1082

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = +1

Query: 175 LEGFRSNADGLCTRVTIGDAPKLQALGMLEPGNTILEIGVFGDTIGMASPGSMATNVKFL 354
           L+G  ++  GL T+++  DA KLQ  G  +P      +GVF D  G A  G   +     
Sbjct: 154 LDGTYADFVGL-TQISGEDAGKLQRTGYPDPNLRPAIVGVFTDLTGPAPQGLSVS----A 208

Query: 355 SLNVRFGNHTNA-KMVPSFLAYFPNLEAL 438
            ++ RF  H  A K+    LA    + AL
Sbjct: 209 EIDTRFTTHPTALKLAAMLLAIVSTVIAL 237

>ASPD_MOUSE (Q9DCQ2) Putative L-aspartate dehydrogenase (EC 1.4.1.21)|
          Length = 287

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 16/77 (20%)
 Frame = -2

Query: 246 LQLGSIADRDPGAQAVGVAPE-PLQD-------------EPLEPRSLHHSDVLQNRAANL 109
           L+L  + +RDPG  A  V P   LQD             E   P+ +H S     R ANL
Sbjct: 38  LELVFVWNRDPGRMAGSVPPALQLQDLTALEERHPDLVVEVAHPKIIHESGAQILRHANL 97

Query: 108 --DAPEALADEAKSQPL 64
              +P ALAD+   Q L
Sbjct: 98  LVGSPSALADQTTEQQL 114

>SMP1L_MOUSE (Q7TN29) Stromal membrane-associated protein 1-like (Stromal|
           membrane-associated protein 2)
          Length = 428

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -3

Query: 302 SPKTPISRMVFPGSSIPNACSLGASPIVTLVHKPSALLR---NPSRMSRSSRGASTTAMS 132
           SPK+    M   G   P ACS+  S     + K   LL    +PS +SR + G+  TA S
Sbjct: 177 SPKSAAPVMDLLGLDAPVACSIANSKTSNALEKDLDLLASVPSPSSVSRKAVGSMPTAGS 236

Query: 131 SRTEPQ 114
           + + P+
Sbjct: 237 AGSVPE 242

>ZN254_HUMAN (O75437) Zinc finger protein 254 (Bone marrow zinc finger 5)|
           (BMZF-5) (Hematopoietic cell-derived zinc finger protein
           1) (HD-ZNF1)
          Length = 353

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +3

Query: 375 KPHQCQDGSLLPRLLSQFGGTAHHV*KR*L*SWQCQAESQLLEAGQAYRKHQVVHQGV 548
           KP++C++ +  P+ LS    T H +       ++C+   +       + KH+V+H GV
Sbjct: 236 KPYKCEEYNKSPKQLSTL--TTHEIIHAGEKLYKCEECGKAFNRSSTFTKHKVIHTGV 291

>ASPD_RAT (Q5I0J9) Putative L-aspartate dehydrogenase (EC 1.4.1.21)|
          Length = 297

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 17/78 (21%)
 Frame = -2

Query: 246 LQLGSIADRDPGAQAVGVAPEPLQDEPL---------------EPRSLHHSDVLQNRAAN 112
           L+L  + +RDPG  A G  P  LQ E L                P+ +H S V   R AN
Sbjct: 38  LELVFVWNRDPGRMA-GSVPPALQLEDLTTLEERHPDLVVEVAHPKIIHESGVQILRHAN 96

Query: 111 L--DAPEALADEAKSQPL 64
           L   +P ALAD+   + L
Sbjct: 97  LLVGSPSALADQTTERQL 114

>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1305

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
 Frame = -3

Query: 377  FPKRTFRLRNLTLVAMLPGLAMPMVSPKTPISRMVFPGSSIPNACS-----LGASPIVTL 213
            F   TFR  + T     PG   P  SP  P S   FP  + P A S       ASP    
Sbjct: 762  FDPLTFRCSSPT-----PGDPAPPASPAPPASASAFPPRATPQALSPHGPTKPASPTALD 816

Query: 212  VHKPSALLRNPSRMSRSSRGASTTAMSSRTEPQIWTH 102
            + +P A+   P+ +     GA  T  S+   P +  H
Sbjct: 817  ISEPLAVSVPPAVL--ELLGAGGTPASATPTPALSPH 851

>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated transcript|
            3) (Protein G3)
          Length = 1132

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = -2

Query: 201  VGVAPEPLQDEPLEPRSLHHSDVLQNRAANLDAPEALADEAKSQPLAGXHGYSVSTWTGP 22
            VG  P+PL +EP+E +    +     R     AP   A+EA S+              GP
Sbjct: 943  VGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR--------------GP 988

Query: 21   PP 16
            PP
Sbjct: 989  PP 990

>EMSY_HUMAN (Q7Z589) Protein EMSY|
          Length = 1322

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = -3

Query: 305  VSPKTPISRMVFPGSSIPNACSLGASPIVT---LVHKPSALLRNPSRMSRSSRGASTTAM 135
            V P+TP S+M  P SS     S    PI+T    V K +   R P  +++ + G+S   +
Sbjct: 1069 VQPQTPQSQMSLPASSEKQTASQVEQPIITQGSSVTKITFEGRQPPTVTKITGGSSVPKL 1128

Query: 134  SS 129
            +S
Sbjct: 1129 TS 1130

>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 979

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
 Frame = -3

Query: 329 LPGLAMPMVSPKTPISRMVF--------PGSSIPNACSLGASPIVTLVHKPSALLRNPSR 174
           LP LA P      P S   F        PGS  P   S+ A       H+       P+R
Sbjct: 518 LPLLATPAAVSGRPGSSFNFRKAPPPIPPGSQAPPRISITAQSSTDSAHESFTAAEGPAR 577

Query: 173 MSRSSRGASTTAMSSRT 123
              S+ G    AM +RT
Sbjct: 578 RCSSADGLDGPAMGART 594


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,606,209
Number of Sequences: 219361
Number of extensions: 1538778
Number of successful extensions: 5602
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5601
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)