| Clone Name | bags7f20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009598.1| Triticum aestivum clone wre1n.pk0075.b10:fis, full insert mRNA sequence Length = 1005 Score = 979 bits (494), Expect = 0.0 Identities = 603/638 (94%), Gaps = 1/638 (0%) Strand = Plus / Plus Query: 1 tatggtgcgttggcagcagcccacaagacgtaatggggtgccagcattgatcgctgaggt 60 |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106 tatggtgctttggcagcagcccacaag-cgtaatggggtgccagcattgatcgctgaggt 164 Query: 61 caagaaggcatcaccaagtcggggcgtactaagggagaacttcgatcctgttgaaattgc 120 ||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 165 caagaaggcgtcaccaagtaggggcgtactcagggagaactttgatcctgttgaaattgc 224 Query: 121 tcaggcttatgaaaagcatggagctgcgtgcttgagcatcttgactgatgagaaatactt 180 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 225 tcaagcttatgaaaagcatggagctgcatgcttgagcatcttgactgatgagaaatactt 284 Query: 181 ccagggaagtttcgagaatcttcagaaggtgcgcaaagcaggagtgaagtgcccccttct 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 285 ccagggaagtttcgagaatcttcagaaggtgcgcaaagcaggagttaagtgcccccttct 344 Query: 241 gtgcaaagagttcgtcgttgataaatggcagatctattatgcccgtgtgatgggtgctga 300 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 345 gtgcaaagagttcgtcgttgacaaatggcagatctattatgcccgtactatgggtgctga 404 Query: 301 tgcagttctgttaattgccgctgtgctaactgatcttgacataaaatactttctacggat 360 |||||||||| ||||||| ||||||||||||||||| |||||||||||||| || || || Sbjct: 405 tgcagttctgctaattgctgctgtgctaactgatctcgacataaaatacttccttcgaat 464 Query: 361 atgcaaggagttgggattgacagctcttattgaggttcatgatgaaagagagatggagcg 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 465 atgcaaggagttgggattgacggctcttattgaggttcatgatgaaagagagatggagcg 524 Query: 421 tgtcctcgcaataaatggtgttcagcttattggcatcaacaaccgtagccttgagacatt 480 | |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 525 tatccttgcgataaatggtgttcagcttattggcatcaacaaccgtagtcttgagacatt 584 Query: 481 tatagtggatacttcgaacacgaagacgttgctggagaagcatggcgatgccatcaggga 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 585 tatagtggatacttcgaacacgaagacgttgctggagaagcatggcaatgccatcaggga 644 Query: 541 gaaaggaatattggttgtcggtgaatctgggctattcaacccagatgatgttgcttatgt 600 ||| |||||||||||||| || ||||| |||||||||| ||||||||||||||||||||| Sbjct: 645 gaagggaatattggttgttggagaatcagggctattcaccccagatgatgttgcttatgt 704 Query: 601 gcagaatgccggagtttctgctgtcttggtaggagaat 638 ||||||||| ||||| || ||||| |||||||| |||| Sbjct: 705 gcagaatgctggagtctccgctgttttggtaggcgaat 742
>gb|BT009207.1| Triticum aestivum clone wle1n.pk0039.d2:fis, full insert mRNA sequence Length = 926 Score = 611 bits (308), Expect = e-171 Identities = 386/412 (93%) Strand = Plus / Plus Query: 227 aagtgcccccttctgtgcaaagagttcgtcgttgataaatggcagatctattatgcccgt 286 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 11 aagtgcccccttctgtgcaaagagttcgtcgttgacaaatggcagatctattatgcccgt 70 Query: 287 gtgatgggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaa 346 ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 71 actatgggtgctgatgcagttctgctaattgctgctgtgctaactgatctcgacataaaa 130 Query: 347 tactttctacggatatgcaaggagttgggattgacagctcttattgaggttcatgatgaa 406 ||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131 tacttccttcgaatatgcaaggagttgggattgacggctcttattgaggttcatgatgaa 190 Query: 407 agagagatggagcgtgtcctcgcaataaatggtgttcagcttattggcatcaacaaccgt 466 ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||| Sbjct: 191 agagagatggagcgtatccttgcgataaatggtgttcagcttattggcatcaacaaccgt 250 Query: 467 agccttgagacatttatagtggatacttcgaacacgaagacgttgctggagaagcatggc 526 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 agtcttgagacatttatagtggatacttcgaacacgaagacgttgctggagaagcatggc 310 Query: 527 gatgccatcagggagaaaggaatattggttgtcggtgaatctgggctattcaacccagat 586 |||||||||||||||| |||||||||||||| || ||||| |||||||||| ||||||| Sbjct: 311 aatgccatcagggagaagggaatattggttgttggagaatcagggctattcaccccagat 370 Query: 587 gatgttgcttatgtgcagaatgccggagtttctgctgtcttggtaggagaat 638 ||||||||||||||||||||||| ||||| || ||||| |||||||| |||| Sbjct: 371 gatgttgcttatgtgcagaatgctggagtctccgctgttttggtaggcgaat 422
>gb|BT017525.1| Zea mays clone EL01N0421D11.c mRNA sequence Length = 1390 Score = 456 bits (230), Expect = e-125 Identities = 509/602 (84%) Strand = Plus / Plus Query: 29 cgtaatggggtgccagcattgatcgctgaggtcaagaaggcatcaccaagtcggggcgta 88 |||||||||||||| |||||||| |||||||||||||| ||||| || ||| |||| || Sbjct: 540 cgtaatggggtgcctgcattgattgctgaggtcaagaaagcatccccgagtaggggtgtg 599 Query: 89 ctaagggagaacttcgatcctgttgaaattgctcaggcttatgaaaagcatggagctgcg 148 || ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 600 ctcagggagaactttaatcctgttgaaattgctcaagcttatgaaaagaatggagctgca 659 Query: 149 tgcttgagcatcttgactgatgagaaatacttccagggaagtttcgagaatcttcagaag 208 || |||||||| ||||| |||||||| ||||| |||||||| || || |||||| | ||| Sbjct: 660 tgtttgagcattttgacagatgagaagtactttcagggaagctttgataatcttgaaaag 719 Query: 209 gtgcgcaaagcaggagtgaagtgcccccttctgtgcaaagagttcgtcgttgataaatgg 268 ||||||| |||||||||||||||| ||||| ||||| ||||| ||| |||| || ||| Sbjct: 720 gtgcgcagctcaggagtgaagtgccctcttctctgcaaggagtttgtcattgacaagtgg 779 Query: 269 cagatctattatgcccgtgtgatgggtgctgatgcagttctgttaattgccgctgtgcta 328 || |||||| |||| || | ||||||||||||| |||| ||||||| ||||||||| Sbjct: 780 caaatctataatgctcgctctaagggtgctgatgcaattctactaattgctgctgtgcta 839 Query: 329 actgatcttgacataaaatactttctacggatatgcaaggagttgggattgacagctctt 388 | ||||||||||||| | ||||| | ||| ||| | ||||||||| ||||||||||| Sbjct: 840 ccagatcttgacataaggaaatttcttcagatttgcgaagagttgggaatgacagctctt 899 Query: 389 attgaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagctt 448 ||||||||||||||||||||||||||||| ||||| || |||||||| ||| ||||| Sbjct: 900 attgaggttcatgatgaaagagagatggaacgtgtgctgaagataaatggagttaagctt 959 Query: 449 attggcatcaacaaccgtagccttgagacatttatagtggatacttcgaacacgaagacg 508 ||||| ||||| ||||| ||||||||||||||| | || |||||||||||||| |||| | Sbjct: 960 attggtatcaataaccgaagccttgagacatttgttgttgatacttcgaacaccaagatg 1019 Query: 509 ttgctggagaagcatggcgatgccatcagggagaaaggaatattggttgtcggtgaatct 568 ||||| ||||| ||||| ||| |||||||||||| ||||| |||||||| |||||||| Sbjct: 1020 ttgctcgagaaacatggggatatcatcagggagaagggaattttggttgttggtgaatca 1079 Query: 569 gggctattcaacccagatgatgttgcttatgtgcagaatgccggagtttctgctgtcttg 628 || || || | || ||||||||||||||||| |||||||| || ||||||||||| ||| Sbjct: 1080 ggtctgtttactccggatgatgttgcttatgttcagaatgctggcgtttctgctgttttg 1139 Query: 629 gt 630 || Sbjct: 1140 gt 1141
>gb|AY104276.1| Zea mays PCO062681 mRNA sequence Length = 1465 Score = 456 bits (230), Expect = e-125 Identities = 509/602 (84%) Strand = Plus / Plus Query: 29 cgtaatggggtgccagcattgatcgctgaggtcaagaaggcatcaccaagtcggggcgta 88 |||||||||||||| |||||||| |||||||||||||| ||||| || ||| |||| || Sbjct: 566 cgtaatggggtgcctgcattgattgctgaggtcaagaaagcatccccgagtaggggtgtg 625 Query: 89 ctaagggagaacttcgatcctgttgaaattgctcaggcttatgaaaagcatggagctgcg 148 || ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 626 ctcagggagaactttaatcctgttgaaattgctcaagcttatgaaaagaatggagctgca 685 Query: 149 tgcttgagcatcttgactgatgagaaatacttccagggaagtttcgagaatcttcagaag 208 || |||||||| ||||| |||||||| ||||| |||||||| || || |||||| | ||| Sbjct: 686 tgtttgagcattttgacagatgagaagtactttcagggaagctttgataatcttgaaaag 745 Query: 209 gtgcgcaaagcaggagtgaagtgcccccttctgtgcaaagagttcgtcgttgataaatgg 268 ||||||| |||||||||||||||| ||||| ||||| ||||| ||| |||| || ||| Sbjct: 746 gtgcgcagctcaggagtgaagtgccctcttctctgcaaggagtttgtcattgacaagtgg 805 Query: 269 cagatctattatgcccgtgtgatgggtgctgatgcagttctgttaattgccgctgtgcta 328 || |||||| |||| || | ||||||||||||| |||| ||||||| ||||||||| Sbjct: 806 caaatctataatgctcgctctaagggtgctgatgcaattctactaattgctgctgtgcta 865 Query: 329 actgatcttgacataaaatactttctacggatatgcaaggagttgggattgacagctctt 388 | ||||||||||||| | ||||| | ||| ||| | ||||||||| ||||||||||| Sbjct: 866 ccagatcttgacataaggaaatttcttcagatttgcgaagagttgggaatgacagctctt 925 Query: 389 attgaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagctt 448 ||||||||||||||||||||||||||||| ||||| || |||||||| ||| ||||| Sbjct: 926 attgaggttcatgatgaaagagagatggaacgtgtgctgaagataaatggagttaagctt 985 Query: 449 attggcatcaacaaccgtagccttgagacatttatagtggatacttcgaacacgaagacg 508 ||||| ||||| ||||| ||||||||||||||| | || |||||||||||||| |||| | Sbjct: 986 attggtatcaataaccgaagccttgagacatttgttgttgatacttcgaacaccaagatg 1045 Query: 509 ttgctggagaagcatggcgatgccatcagggagaaaggaatattggttgtcggtgaatct 568 ||||| ||||| ||||| ||| |||||||||||| ||||| |||||||| |||||||| Sbjct: 1046 ttgctcgagaaacatggggatatcatcagggagaagggaattttggttgttggtgaatca 1105 Query: 569 gggctattcaacccagatgatgttgcttatgtgcagaatgccggagtttctgctgtcttg 628 || || || | || ||||||||||||||||| |||||||| || ||||||||||| ||| Sbjct: 1106 ggtctgtttactccggatgatgttgcttatgttcagaatgctggcgtttctgctgttttg 1165 Query: 629 gt 630 || Sbjct: 1166 gt 1167
>ref|XM_481579.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 377 bits (190), Expect = e-101 Identities = 375/434 (86%), Gaps = 2/434 (0%) Strand = Plus / Plus Query: 206 aaggtgcgcaaagcaggagtgaagtgcccccttctgtgcaaagagttcgtcgttgataaa 265 |||||||| || |||||||||||||||| || || ||||||||||| ||| | |||||| Sbjct: 700 aaggtgcggaagtcaggagtgaagtgccctctcctatgcaaagagtttgtcatcgataaa 759 Query: 266 tggcagatctattatgcccg-tgtgatgggtgctgatgcagttctgttaattgccgctgt 324 |||||||||||||||||||| | | | ||| || |||||| ||||| | ||||||||||| Sbjct: 760 tggcagatctattatgcccgctctca-gggcgcagatgcaattctgcttattgccgctgt 818 Query: 325 gctaactgatcttgacataaaatactttctacggatatgcaaggagttgggattgacagc 384 |||| ||||||| |||||||| ||||| || || ||||| |||||||||||| ||||||| Sbjct: 819 gctacctgatctcgacataaagtacttccttcgcatatgtaaggagttgggaatgacagc 878 Query: 385 tcttattgaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttca 444 |||||||||||||||||||||||| |||||||||||||| || |||| ||| ||||| Sbjct: 879 tcttattgaggttcatgatgaaagggagatggagcgtgtgctgaatataagtggagttca 938 Query: 445 gcttattggcatcaacaaccgtagccttgagacatttatagtggatacttcgaacacgaa 504 ||||||||||||||| ||||| |||||||| |||||| | || |||||||| ||||| || Sbjct: 939 gcttattggcatcaataaccgcagccttgaaacatttgttgtcgatacttcaaacacaaa 998 Query: 505 gacgttgctggagaagcatggcgatgccatcagggagaaaggaatattggttgtcggtga 564 || |||||| || | |||||| ||| ||||||||||||| |||||||||||||| || || Sbjct: 999 gatgttgctagatatgcatggtgataccatcagggagaagggaatattggttgttggcga 1058 Query: 565 atctgggctattcaacccagatgatgttgcttatgtgcagaatgccggagtttctgctgt 624 ||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 1059 atcagggctgttcaacccagatgacgttgcttatgtgcaaaatgctggagtttccgctgt 1118 Query: 625 cttggtaggagaat 638 ||||| ||||||| Sbjct: 1119 tttggtgggagaat 1132 Score = 182 bits (92), Expect = 9e-43 Identities = 125/136 (91%) Strand = Plus / Plus Query: 39 tgccagcattgatcgctgaggtcaagaaggcatcaccaagtcggggcgtactaagggaga 98 ||||||| |||||||||||||||||||||||||| |||||| |||| || || ||||||| Sbjct: 488 tgccagcgttgatcgctgaggtcaagaaggcatcgccaagtaggggtgtgctcagggaga 547 Query: 99 acttcgatcctgttgaaattgctcaggcttatgaaaagcatggagctgcgtgcttgagca 158 ||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 548 acttcaatcctgttgaaattgctcaggcttatgaaaagaatggtgctgcatgcttgagca 607 Query: 159 tcttgactgatgagaa 174 ||||||| |||||||| Sbjct: 608 tcttgaccgatgagaa 623
>gb|BT009177.1| Triticum aestivum clone wl1n.pk0112.b3:fis, full insert mRNA sequence Length = 475 Score = 349 bits (176), Expect = 7e-93 Identities = 395/468 (84%) Strand = Plus / Plus Query: 44 gcattgatcgctgaggtcaagaaggcatcaccaagtcggggcgtactaagggagaacttc 103 |||||||| |||||||||||||| ||||| || ||| |||| || || ||||||||||| Sbjct: 8 gcattgattgctgaggtcaagaaagcatccccgagtaggggtgtgctcagggagaacttt 67 Query: 104 gatcctgttgaaattgctcaggcttatgaaaagcatggagctgcgtgcttgagcatcttg 163 ||||||||||||||||||| |||||||||||| |||||||||| || |||||||| ||| Sbjct: 68 aatcctgttgaaattgctcaagcttatgaaaagaatggagctgcatgtttgagcattttg 127 Query: 164 actgatgagaaatacttccagggaagtttcgagaatcttcagaaggtgcgcaaagcagga 223 || |||||||| ||||| |||||||| || || |||||| | |||||||||| ||||| Sbjct: 128 acagatgagaagtactttcagggaagctttgataatcttgaaaaggtgcgcagctcagga 187 Query: 224 gtgaagtgcccccttctgtgcaaagagttcgtcgttgataaatggcagatctattatgcc 283 ||||||||||| ||||| ||||| ||||| ||| |||| || ||||| |||||| |||| Sbjct: 188 gtgaagtgccctcttctctgcaaggagtttgtcattgacaagtggcaaatctataatgct 247 Query: 284 cgtgtgatgggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacata 343 || | ||||||||||||| |||| ||||||| ||||||||| | |||||||||||| Sbjct: 248 cgctctaagggtgctgatgcaattctactaattgctgctgtgctaccagatcttgacata 307 Query: 344 aaatactttctacggatatgcaaggagttgggattgacagctcttattgaggttcatgat 403 | | ||||| | ||| ||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 308 aggaaatttcttcagatttgcgaagagttgggaatgacagctcttattgaggttcatgat 367 Query: 404 gaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttattggcatcaacaac 463 |||||||||||||| ||||| || |||||||| ||| |||||||||| ||||| ||| Sbjct: 368 gaaagagagatggaacgtgtgctgaagataaatggagttaagcttattggtatcaataac 427 Query: 464 cgtagccttgagacatttatagtggatacttcgaacacgaagacgttg 511 || ||||||||||||||| | || |||||||||||||| |||| |||| Sbjct: 428 cgaagccttgagacatttgttgttgatacttcgaacaccaagatgttg 475
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 3e-30 Identities = 148/171 (86%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 228 agtgcccccttctgtgcaaagagttcgtcgttgataaatggcagatctattatgcccg-t 286 ||||||| || || ||||||||||| ||| | |||||||||||||||||||||||||| | Sbjct: 13948846 agtgccctctcctatgcaaagagtttgtcatcgataaatggcagatctattatgcccgct 13948905 Query: 287 gtgatgggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaa 346 | | ||| || |||||| ||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 13948906 ctca-gggcgcagatgcaattctgcttattgccgctgtgctacctgatctcgacataaag 13948964 Query: 347 tactttctacggatatgcaaggagttgggattgacagctcttattgaggtt 397 ||||| || || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 13948965 tacttccttcgcatatgtaaggagttgggaatgacagctcttattgaggtt 13949015 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 110 gttgaaattgctcaggcttatgaaaagcatggagctgcgtgcttgagcatcttgactgat 169 ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||| Sbjct: 13948546 gttgaaattgctcaggcttatgaaaagaatggtgctgcatgcttgagcatcttgaccgat 13948605 Query: 170 gagaa 174 ||||| Sbjct: 13948606 gagaa 13948610 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 39 tgccagcattgatcgctgaggtcaagaaggcatcaccaagtcggggcgtactaagggaga 98 ||||||| |||||||||||||||||||||||||| |||||| |||| || || ||||||| Sbjct: 13948395 tgccagcgttgatcgctgaggtcaagaaggcatcgccaagtaggggtgtgctcagggaga 13948454 Query: 99 acttcgatcctgt 111 ||||| ||||||| Sbjct: 13948455 acttcaatcctgt 13948467 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 393 aggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttattg 452 |||||||||||||||| |||||||||||||| || |||| ||| ||||||||||||| Sbjct: 13949322 aggttcatgatgaaagggagatggagcgtgtgctgaatataagtggagttcagcttattg 13949381 Query: 453 gcatcaacaaccgtagccttg 473 ||||||| ||||| ||||||| Sbjct: 13949382 gcatcaataaccgcagccttg 13949402 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 553 ggttgtcggtgaatctgggctattcaacccagatgatgttgcttatgtgcagaatgccgg 612 |||||| || ||||| ||||| |||||||||||||| |||||||||||||| ||||| || Sbjct: 13950547 ggttgttggcgaatcagggctgttcaacccagatgacgttgcttatgtgcaaaatgctgg 13950606 Query: 613 agtttctgctgt 624 |||||| ||||| Sbjct: 13950607 agtttccgctgt 13950618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 488 gatacttcgaacacgaagacgttgctggagaagcatggcgatgccatcagggagaaagga 547 |||||||| ||||| |||| |||||| || | |||||| ||| ||||||||||||| ||| Sbjct: 13949566 gatacttcaaacacaaagatgttgctagatatgcatggtgataccatcagggagaaggga 13949625 Query: 548 atattggt 555 |||||||| Sbjct: 13949626 atattggt 13949633
>dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0005C02 Length = 62423 Score = 141 bits (71), Expect = 3e-30 Identities = 148/171 (86%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 228 agtgcccccttctgtgcaaagagttcgtcgttgataaatggcagatctattatgcccg-t 286 ||||||| || || ||||||||||| ||| | |||||||||||||||||||||||||| | Sbjct: 3169 agtgccctctcctatgcaaagagtttgtcatcgataaatggcagatctattatgcccgct 3228 Query: 287 gtgatgggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaa 346 | | ||| || |||||| ||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 3229 ctca-gggcgcagatgcaattctgcttattgccgctgtgctacctgatctcgacataaag 3287 Query: 347 tactttctacggatatgcaaggagttgggattgacagctcttattgaggtt 397 ||||| || || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 3288 tacttccttcgcatatgtaaggagttgggaatgacagctcttattgaggtt 3338 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 110 gttgaaattgctcaggcttatgaaaagcatggagctgcgtgcttgagcatcttgactgat 169 ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||| Sbjct: 2869 gttgaaattgctcaggcttatgaaaagaatggtgctgcatgcttgagcatcttgaccgat 2928 Query: 170 gagaa 174 ||||| Sbjct: 2929 gagaa 2933 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 39 tgccagcattgatcgctgaggtcaagaaggcatcaccaagtcggggcgtactaagggaga 98 ||||||| |||||||||||||||||||||||||| |||||| |||| || || ||||||| Sbjct: 2718 tgccagcgttgatcgctgaggtcaagaaggcatcgccaagtaggggtgtgctcagggaga 2777 Query: 99 acttcgatcctgt 111 ||||| ||||||| Sbjct: 2778 acttcaatcctgt 2790 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 393 aggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttattg 452 |||||||||||||||| |||||||||||||| || |||| ||| ||||||||||||| Sbjct: 3645 aggttcatgatgaaagggagatggagcgtgtgctgaatataagtggagttcagcttattg 3704 Query: 453 gcatcaacaaccgtagccttg 473 ||||||| ||||| ||||||| Sbjct: 3705 gcatcaataaccgcagccttg 3725 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 553 ggttgtcggtgaatctgggctattcaacccagatgatgttgcttatgtgcagaatgccgg 612 |||||| || ||||| ||||| |||||||||||||| |||||||||||||| ||||| || Sbjct: 4870 ggttgttggcgaatcagggctgttcaacccagatgacgttgcttatgtgcaaaatgctgg 4929 Query: 613 agtttctgctgt 624 |||||| ||||| Sbjct: 4930 agtttccgctgt 4941 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 488 gatacttcgaacacgaagacgttgctggagaagcatggcgatgccatcagggagaaagga 547 |||||||| ||||| |||| |||||| || | |||||| ||| ||||||||||||| ||| Sbjct: 3889 gatacttcaaacacaaagatgttgctagatatgcatggtgataccatcagggagaaggga 3948 Query: 548 atattggt 555 |||||||| Sbjct: 3949 atattggt 3956
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_D12 Length = 105521 Score = 141 bits (71), Expect = 3e-30 Identities = 148/171 (86%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 228 agtgcccccttctgtgcaaagagttcgtcgttgataaatggcagatctattatgcccg-t 286 ||||||| || || ||||||||||| ||| | |||||||||||||||||||||||||| | Sbjct: 93241 agtgccctctcctatgcaaagagtttgtcatcgataaatggcagatctattatgcccgct 93300 Query: 287 gtgatgggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaa 346 | | ||| || |||||| ||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 93301 ctca-gggcgcagatgcaattctgcttattgccgctgtgctacctgatctcgacataaag 93359 Query: 347 tactttctacggatatgcaaggagttgggattgacagctcttattgaggtt 397 ||||| || || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 93360 tacttccttcgcatatgtaaggagttgggaatgacagctcttattgaggtt 93410 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 110 gttgaaattgctcaggcttatgaaaagcatggagctgcgtgcttgagcatcttgactgat 169 ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||| Sbjct: 92941 gttgaaattgctcaggcttatgaaaagaatggtgctgcatgcttgagcatcttgaccgat 93000 Query: 170 gagaa 174 ||||| Sbjct: 93001 gagaa 93005 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 39 tgccagcattgatcgctgaggtcaagaaggcatcaccaagtcggggcgtactaagggaga 98 ||||||| |||||||||||||||||||||||||| |||||| |||| || || ||||||| Sbjct: 92790 tgccagcgttgatcgctgaggtcaagaaggcatcgccaagtaggggtgtgctcagggaga 92849 Query: 99 acttcgatcctgt 111 ||||| ||||||| Sbjct: 92850 acttcaatcctgt 92862 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 393 aggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttattg 452 |||||||||||||||| |||||||||||||| || |||| ||| ||||||||||||| Sbjct: 93717 aggttcatgatgaaagggagatggagcgtgtgctgaatataagtggagttcagcttattg 93776 Query: 453 gcatcaacaaccgtagccttg 473 ||||||| ||||| ||||||| Sbjct: 93777 gcatcaataaccgcagccttg 93797 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 553 ggttgtcggtgaatctgggctattcaacccagatgatgttgcttatgtgcagaatgccgg 612 |||||| || ||||| ||||| |||||||||||||| |||||||||||||| ||||| || Sbjct: 94942 ggttgttggcgaatcagggctgttcaacccagatgacgttgcttatgtgcaaaatgctgg 95001 Query: 613 agtttctgctgt 624 |||||| ||||| Sbjct: 95002 agtttccgctgt 95013 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 488 gatacttcgaacacgaagacgttgctggagaagcatggcgatgccatcagggagaaagga 547 |||||||| ||||| |||| |||||| || | |||||| ||| ||||||||||||| ||| Sbjct: 93961 gatacttcaaacacaaagatgttgctagatatgcatggtgataccatcagggagaaggga 94020 Query: 548 atattggt 555 |||||||| Sbjct: 94021 atattggt 94028
>ref|XM_450323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1419 Score = 129 bits (65), Expect = 1e-26 Identities = 275/345 (79%) Strand = Plus / Plus Query: 292 gggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaatactt 351 |||||| |||||| ||||||| ||||| || ||| || ||||||| ||||| || ||| | Sbjct: 785 gggtgcggatgcaattctgttgattgctgccgtgttacctgatctcgacatcaagtacat 844 Query: 352 tctacggatatgcaaggagttgggattgacagctcttattgaggttcatgatgaaagaga 411 || || || |||||| | | ||| |||||||||| || |||||||||||||| || || Sbjct: 845 gcttcgcatctgcaagaacctcggaatgacagctctcatagaggttcatgatgagaggga 904 Query: 412 gatggagcgtgtcctcgcaataaatggtgttcagcttattggcatcaacaaccgtagcct 471 | |||| ||||| ||| |||| |||| ||||||||||| |||||||| ||||| || | Sbjct: 905 gctggatcgtgtgctcaaaatagatggcgttcagcttatcggcatcaataaccgaagttt 964 Query: 472 tgagacatttatagtggatacttcgaacacgaagacgttgctggagaagcatggcgatgc 531 ||||| |||| || |||||||| ||||| ||||| || ||||||| | ||| || Sbjct: 965 agagacgtttaaggttgatacttcaaacacaaagaccctgttggagaaacgtggtgacct 1024 Query: 532 catcagggagaaaggaatattggttgtcggtgaatctgggctattcaacccagatgatgt 591 ||| ||||| ||||| || ||||||| ||||||||||| || |||| || |||||||| Sbjct: 1025 cataagggataaagggattctggttgttggtgaatctggtcttttcacgcctgatgatgt 1084 Query: 592 tgcttatgtgcagaatgccggagtttctgctgtcttggtaggaga 636 ||| || ||||||||||| || |||||||| | ||||||||||| Sbjct: 1085 tgcatacgtgcagaatgctggtgtttctgcaattttggtaggaga 1129
>dbj|AK071383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092E01, full insert sequence Length = 1420 Score = 129 bits (65), Expect = 1e-26 Identities = 275/345 (79%) Strand = Plus / Plus Query: 292 gggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaatactt 351 |||||| |||||| ||||||| ||||| || ||| || ||||||| ||||| || ||| | Sbjct: 785 gggtgcggatgcaattctgttgattgctgccgtgttacctgatctcgacatcaagtacat 844 Query: 352 tctacggatatgcaaggagttgggattgacagctcttattgaggttcatgatgaaagaga 411 || || || |||||| | | ||| |||||||||| || |||||||||||||| || || Sbjct: 845 gcttcgcatctgcaagaacctcggaatgacagctctcatagaggttcatgatgagaggga 904 Query: 412 gatggagcgtgtcctcgcaataaatggtgttcagcttattggcatcaacaaccgtagcct 471 | |||| ||||| ||| |||| |||| ||||||||||| |||||||| ||||| || | Sbjct: 905 gctggatcgtgtgctcaaaatagatggcgttcagcttatcggcatcaataaccgaagttt 964 Query: 472 tgagacatttatagtggatacttcgaacacgaagacgttgctggagaagcatggcgatgc 531 ||||| |||| || |||||||| ||||| ||||| || ||||||| | ||| || Sbjct: 965 agagacgtttaaggttgatacttcaaacacaaagaccctgttggagaaacgtggtgacct 1024 Query: 532 catcagggagaaaggaatattggttgtcggtgaatctgggctattcaacccagatgatgt 591 ||| ||||| ||||| || ||||||| ||||||||||| || |||| || |||||||| Sbjct: 1025 cataagggataaagggattctggttgttggtgaatctggtcttttcacgcctgatgatgt 1084 Query: 592 tgcttatgtgcagaatgccggagtttctgctgtcttggtaggaga 636 ||| || ||||||||||| || |||||||| | ||||||||||| Sbjct: 1085 tgcatacgtgcagaatgctggtgtttctgcaattttggtaggaga 1129
>ref|XM_450324.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1270 Score = 123 bits (62), Expect = 8e-25 Identities = 263/330 (79%) Strand = Plus / Plus Query: 292 gggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaatactt 351 |||||| |||||| ||||||| ||||| || ||| || ||||||| ||||| || ||| | Sbjct: 784 gggtgcggatgcaattctgttgattgctgccgtgttacctgatctcgacatcaagtacat 843 Query: 352 tctacggatatgcaaggagttgggattgacagctcttattgaggttcatgatgaaagaga 411 || || || |||||| | | ||| |||||||||| || |||||||||||||| || || Sbjct: 844 gcttcgcatctgcaagaacctcggaatgacagctctcatagaggttcatgatgagaggga 903 Query: 412 gatggagcgtgtcctcgcaataaatggtgttcagcttattggcatcaacaaccgtagcct 471 | |||| ||||| ||| |||| |||| ||||||||||| |||||||| ||||| || | Sbjct: 904 gctggatcgtgtgctcaaaatagatggcgttcagcttatcggcatcaataaccgaagttt 963 Query: 472 tgagacatttatagtggatacttcgaacacgaagacgttgctggagaagcatggcgatgc 531 ||||| |||| || |||||||| ||||| ||||| || ||||||| | ||| || Sbjct: 964 agagacgtttaaggttgatacttcaaacacaaagaccctgttggagaaacgtggtgacct 1023 Query: 532 catcagggagaaaggaatattggttgtcggtgaatctgggctattcaacccagatgatgt 591 ||| ||||| ||||| || ||||||| ||||||||||| || |||| || |||||||| Sbjct: 1024 cataagggataaagggattctggttgttggtgaatctggtcttttcacgcctgatgatgt 1083 Query: 592 tgcttatgtgcagaatgccggagtttctgc 621 ||| || ||||||||||| || |||||||| Sbjct: 1084 tgcatacgtgcagaatgctggtgtttctgc 1113
>dbj|AK059358.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D08, full insert sequence Length = 1270 Score = 123 bits (62), Expect = 8e-25 Identities = 263/330 (79%) Strand = Plus / Plus Query: 292 gggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaatactt 351 |||||| |||||| ||||||| ||||| || ||| || ||||||| ||||| || ||| | Sbjct: 784 gggtgcggatgcaattctgttgattgctgccgtgttacctgatctcgacatcaagtacat 843 Query: 352 tctacggatatgcaaggagttgggattgacagctcttattgaggttcatgatgaaagaga 411 || || || |||||| | | ||| |||||||||| || |||||||||||||| || || Sbjct: 844 gcttcgcatctgcaagaacctcggaatgacagctctcatagaggttcatgatgagaggga 903 Query: 412 gatggagcgtgtcctcgcaataaatggtgttcagcttattggcatcaacaaccgtagcct 471 | |||| ||||| ||| |||| |||| ||||||||||| |||||||| ||||| || | Sbjct: 904 gctggatcgtgtgctcaaaatagatggcgttcagcttatcggcatcaataaccgaagttt 963 Query: 472 tgagacatttatagtggatacttcgaacacgaagacgttgctggagaagcatggcgatgc 531 ||||| |||| || |||||||| ||||| ||||| || ||||||| | ||| || Sbjct: 964 agagacgtttaaggttgatacttcaaacacaaagaccctgttggagaaacgtggtgacct 1023 Query: 532 catcagggagaaaggaatattggttgtcggtgaatctgggctattcaacccagatgatgt 591 ||| ||||| ||||| || ||||||| ||||||||||| || |||| || |||||||| Sbjct: 1024 cataagggataaagggattctggttgttggtgaatctggtcttttcacgcctgatgatgt 1083 Query: 592 tgcttatgtgcagaatgccggagtttctgc 621 ||| || ||||||||||| || |||||||| Sbjct: 1084 tgcatacgtgcagaatgctggtgtttctgc 1113
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 393 aggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttattg 452 ||||||||||||| || ||| |||| ||||| ||| |||| |||| ||||||||||| | Sbjct: 4148345 aggttcatgatgagagggagctggatcgtgtgctcaaaatagatggcgttcagcttatcg 4148286 Query: 453 gcatcaacaaccg 465 ||||||| ||||| Sbjct: 4148285 gcatcaataaccg 4148273 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 553 ggttgtcggtgaatctgggctattcaacccagatgatgttgcttatgtgcagaatgccgg 612 |||||| ||||||||||| || |||| || ||||||||||| || ||||||||||| || Sbjct: 4147698 ggttgttggtgaatctggtcttttcacgcctgatgatgttgcatacgtgcagaatgctgg 4147639 Query: 613 agtttctgc 621 |||||||| Sbjct: 4147638 tgtttctgc 4147630
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066C12 Length = 168874 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 393 aggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttattg 452 ||||||||||||| || ||| |||| ||||| ||| |||| |||| ||||||||||| | Sbjct: 131826 aggttcatgatgagagggagctggatcgtgtgctcaaaatagatggcgttcagcttatcg 131767 Query: 453 gcatcaacaaccg 465 ||||||| ||||| Sbjct: 131766 gcatcaataaccg 131754 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 553 ggttgtcggtgaatctgggctattcaacccagatgatgttgcttatgtgcagaatgccgg 612 |||||| ||||||||||| || |||| || ||||||||||| || ||||||||||| || Sbjct: 131179 ggttgttggtgaatctggtcttttcacgcctgatgatgttgcatacgtgcagaatgctgg 131120 Query: 613 agtttctgc 621 |||||||| Sbjct: 131119 tgtttctgc 131111
>ref|NM_124197.2| Arabidopsis thaliana indole-3-glycerol-phosphate synthase AT5G48220 mRNA, complete cds Length = 1413 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 392 gaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttatt 451 ||||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| ||| Sbjct: 908 gaggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcatt 967 Query: 452 ggcatcaacaaccgtagccttgagacattt 481 |||||||| ||||||| |||||| |||||| Sbjct: 968 ggcatcaataaccgtaaccttgaaacattt 997
>gb|AY060498.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, complete cds Length = 1140 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 392 gaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttatt 451 ||||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| ||| Sbjct: 823 gaggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcatt 882 Query: 452 ggcatcaacaaccgtagccttgagacattt 481 |||||||| ||||||| |||||| |||||| Sbjct: 883 ggcatcaataaccgtaaccttgaaacattt 912
>gb|AY052223.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, complete cds Length = 1358 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 392 gaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttatt 451 ||||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| ||| Sbjct: 856 gaggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcatt 915 Query: 452 ggcatcaacaaccgtagccttgagacattt 481 |||||||| ||||||| |||||| |||||| Sbjct: 916 ggcatcaataaccgtaaccttgaaacattt 945
>gb|AY050327.1| Arabidopsis thaliana AT5g48220/MIF21_11 mRNA, complete cds Length = 1407 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 392 gaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttatt 451 ||||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| ||| Sbjct: 908 gaggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcatt 967 Query: 452 ggcatcaacaaccgtagccttgagacattt 481 |||||||| ||||||| |||||| |||||| Sbjct: 968 ggcatcaataaccgtaaccttgaaacattt 997
>emb|BX833681.1|CNS0A1R5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 392 gaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttatt 451 ||||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| ||| Sbjct: 198 gaggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcatt 257 Query: 452 ggcatcaacaaccgtagccttgagacattt 481 |||||||| ||||||| |||||| |||||| Sbjct: 258 ggcatcaataaccgtaaccttgaaacattt 287
>emb|BX830453.1|CNS0A060 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1306 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 392 gaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttatt 451 ||||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| ||| Sbjct: 843 gaggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcatt 902 Query: 452 ggcatcaacaaccgtagccttgagacattt 481 |||||||| ||||||| |||||| |||||| Sbjct: 903 ggcatcaataaccgtaaccttgaaacattt 932
>emb|BX832169.1|CNS09ZME Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 392 gaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttatt 451 ||||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| ||| Sbjct: 861 gaggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcatt 920 Query: 452 ggcatcaacaaccgtagccttgagacattt 481 |||||||| ||||||| |||||| |||||| Sbjct: 921 ggcatcaataaccgtaaccttgaaacattt 950
>gb|BT017430.1| Zea mays clone EL01N0403D03.c mRNA sequence Length = 1119 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 56 gaggtcaagaaggcatcaccaagtcggggcgtactaagggagaacttcgatcctgttgaa 115 |||||||||||||| |||||||| ||||| || | |||||||| || ||||| ||| | Sbjct: 978 gaggtcaagaaggcttcaccaagccggggtgttatcagggagaattttgatccggttcag 919 Query: 116 attgctcaggcttatga 132 || |||||||| ||||| Sbjct: 918 atcgctcaggcatatga 902 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 390 ttgaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagctta 449 ||||||||||||| |||||||| ||||| ||||| | | || ||||||| ||||| | Sbjct: 644 ttgaggttcatgacgaaagagaaatggaccgtgttttagggattgatggtgtacagctca 585 Query: 450 ttggcatcaacaaccgtagccttgagacattt 481 | |||||||| ||||||| || ||||||||| Sbjct: 584 tcggcatcaataaccgtaatctcgagacattt 553 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 agtgcccccttctgtgcaaagagttc 253 ||||||| |||||||||||||||||| Sbjct: 806 agtgccctcttctgtgcaaagagttc 781
>ref|XM_472804.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 48.1 bits (24), Expect = 0.036 Identities = 72/88 (81%) Strand = Plus / Plus Query: 390 ttgaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagctta 449 ||||||| ||||||||||| || ||||| ||||| | | ||| ||||||| ||||| | Sbjct: 851 ttgaggtgcatgatgaaagggaaatggaccgtgtgttagggatagatggtgtccagctca 910 Query: 450 ttggcatcaacaaccgtagccttgagac 477 | |||||||| ||||||| ||| ||||| Sbjct: 911 tcggcatcaataaccgtaacctcgagac 938
>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE Length = 123977 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 444 agcttattggcatcaacaaccgta 467 |||||||||||||||||||||||| Sbjct: 41974 agcttattggcatcaacaaccgta 41997 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 293 ggtgctgatgcagttctgttaattgccgctgtgctaactgatcttgacataaaatac 349 ||||| |||||||| || ||||||| ||||| || ||||||||||||| |||||| Sbjct: 41392 ggtgcagatgcagtgcttctaattgctgctgttttacctgatcttgacatcaaatac 41448
>dbj|AK101835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069C16, full insert sequence Length = 974 Score = 48.1 bits (24), Expect = 0.036 Identities = 72/88 (81%) Strand = Plus / Plus Query: 390 ttgaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagctta 449 ||||||| ||||||||||| || ||||| ||||| | | ||| ||||||| ||||| | Sbjct: 412 ttgaggtgcatgatgaaagggaaatggaccgtgtgttagggatagatggtgtccagctca 471 Query: 450 ttggcatcaacaaccgtagccttgagac 477 | |||||||| ||||||| ||| ||||| Sbjct: 472 tcggcatcaataaccgtaacctcgagac 499
>gb|AY110654.1| Zea mays CL6_1 mRNA sequence Length = 798 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 390 ttgaggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagctta 449 ||||||||||||| |||||||| ||||| ||||| | | || ||||||| ||||| | Sbjct: 619 ttgaggttcatgacgaaagagaaatggaccgtgttttagggattgatggtgtacagctca 560 Query: 450 ttggcatcaacaaccgtagccttgagacattt 481 | |||||||| ||||||| || ||||||||| Sbjct: 559 tcggcatcaataaccgtaatctcgagacattt 528 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 agtgcccccttctgtgcaaagagttc 253 ||||||| |||||||||||||||||| Sbjct: 781 agtgccctcttctgtgcaaagagttc 756
>gb|AC116677.11| Mus musculus chromosome 3, clone RP23-111M12, complete sequence Length = 214206 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 327 taactgatcttgacataaaatactt 351 |||||||||||| |||||||||||| Sbjct: 144593 taactgatcttggcataaaatactt 144569
>gb|AC087286.12| Homo sapiens chromosome 15, clone RP11-815J21, complete sequence Length = 193549 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ttgctcaggcttatgaaaagcatgg 141 |||||||||||||| |||||||||| Sbjct: 107673 ttgctcaggcttatcaaaagcatgg 107697
>dbj|AK055090.1| Homo sapiens cDNA FLJ30528 fis, clone BRAWH2001037 Length = 2128 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 tcagcttattggcatcaacaa 462 ||||||||||||||||||||| Sbjct: 1959 tcagcttattggcatcaacaa 1939
>gb|AC013402.9| Homo sapiens BAC clone RP11-134N15 from 2, complete sequence Length = 177882 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 tcagcttattggcatcaacaa 462 ||||||||||||||||||||| Sbjct: 13239 tcagcttattggcatcaacaa 13219
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21 Length = 59372 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Plus Query: 393 aggttcatgatgaaagagagatggagcgtgtcctcgcaataaatggtgttcagcttattg 452 |||| ||||| ||||| |||||||| ||||| || ||||| | || || |||| |||| Sbjct: 43069 aggtccatgacgaaagggagatggatcgtgttcttgcaattgaaggagtcgagctcattg 43128 Query: 453 gcatcaacaaccgtagccttg 473 ||||||| ||||||| ||||| Sbjct: 43129 gcatcaataaccgtaaccttg 43149
>ref|XM_514712.1| PREDICTED: Pan troglodytes LOC458321 (LOC458321), mRNA Length = 5819 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 921 agatgatgttgcttatgtgc 902
>gb|AE006428.1| Lactococcus lactis subsp. lactis IL1403 section 190 of 218 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ttgacataaaatactttcta 355 |||||||||||||||||||| Sbjct: 6264 ttgacataaaatactttcta 6283
>gb|AC147901.2| Xenopus tropicalis clone CH216-57C20, complete sequence Length = 151523 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ttgactgatgagaaatactt 180 |||||||||||||||||||| Sbjct: 15134 ttgactgatgagaaatactt 15153
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 agcttattggcatcaacaac 463 |||||||||||||||||||| Sbjct: 20488967 agcttattggcatcaacaac 20488986
>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete sequence Length = 101073 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 agcttattggcatcaacaac 463 |||||||||||||||||||| Sbjct: 3032 agcttattggcatcaacaac 3051
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 162 tgactgatgagaaatacttccagggaag 189 |||||||||||||||| || |||||||| Sbjct: 1440471 tgactgatgagaaatattttcagggaag 1440444
>emb|AJ011653.1|LLA011653 Lactococcus lactis (strain MG1363) galactose operon (galAMKTE genes) Length = 7309 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ttgacataaaatactttcta 355 |||||||||||||||||||| Sbjct: 4414 ttgacataaaatactttcta 4395
>gb|BC014041.2| Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone IMAGE:4546448), partial cds Length = 2810 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 808 agatgatgttgcttatgtgc 789
>emb|AL049766.14|HSDJ686N3 Human DNA sequence from clone RP4-686N3 on chromosome 20q13.2-13.2 Contains the 3' end of the DDX27 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 27, the KIAA1404 gene, a novel gene and two CpG islands, complete sequence Length = 110293 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 48317 agatgatgttgcttatgtgc 48336
>emb|AL592102.1|LISINP100 Listeria innocua plasmid pLI100, complete sequence Length = 81905 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 ccagatgatgttgcttatgt 600 |||||||||||||||||||| Sbjct: 32833 ccagatgatgttgcttatgt 32852
>gb|BC030789.1| Homo sapiens cDNA clone IMAGE:5265582, containing frame-shift errors Length = 4963 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 922 agatgatgttgcttatgtgc 903
>gb|AF316534.1| Prunus persica ethylene-responsive sensor (ERS) gene, complete cds Length = 4633 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gatgggtgctgatgcagttc 308 |||||||||||||||||||| Sbjct: 1806 gatgggtgctgatgcagttc 1825
>dbj|AK096594.1| Homo sapiens cDNA FLJ39275 fis, clone OCBBF2010830 Length = 3133 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 1199 agatgatgttgcttatgtgc 1180
>dbj|AK002139.1| Homo sapiens cDNA FLJ11277 fis, clone PLACE1009404 Length = 2839 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 905 agatgatgttgcttatgtgc 886
>dbj|AK022641.1| Homo sapiens cDNA FLJ12579 fis, clone NT2RM4001084, weakly similar to HYPOTHETICAL 105.6 KD PROTEIN C16C9.06C IN CHROMOSOME I Length = 2122 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 157 agatgatgttgcttatgtgc 138
>ref|NM_021035.1| Homo sapiens zinc finger, NFX1-type containing 1 (ZNFX1), mRNA Length = 7209 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 830 agatgatgttgcttatgtgc 811
>emb|AL929393.8| Mouse DNA sequence from clone RP23-94P7 on chromosome 4, complete sequence Length = 202299 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ttgcttatgtgcagaatgcc 610 |||||||||||||||||||| Sbjct: 57020 ttgcttatgtgcagaatgcc 57039
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 agcttattggcatcaacaac 463 |||||||||||||||||||| Sbjct: 20481996 agcttattggcatcaacaac 20482015
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 agcttattggcatcaacaac 463 |||||||||||||||||||| Sbjct: 133267 agcttattggcatcaacaac 133286
>dbj|AP006842.1| Bacteroides fragilis YCH46 plasmid pBFY46 DNA, complete sequence Length = 33716 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 aataaatggtgttcagctta 449 |||||||||||||||||||| Sbjct: 21117 aataaatggtgttcagctta 21136
>emb|AL954684.9| Mouse DNA sequence from clone RP24-352O9 on chromosome 2, complete sequence Length = 170478 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 agcaggagtgaagtgccccc 236 |||||||||||||||||||| Sbjct: 115500 agcaggagtgaagtgccccc 115519
>gb|U60828.1|LLU60828 Lactococcus lactis galactose-lactose operon, complete sequence Length = 14263 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ttgacataaaatactttcta 355 |||||||||||||||||||| Sbjct: 6334 ttgacataaaatactttcta 6315
>gb|AF082008.1|AF082008 Lactococcus lactis NCDO2054 gal-lac operon, partial sequence Length = 7172 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ttgacataaaatactttcta 355 |||||||||||||||||||| Sbjct: 556 ttgacataaaatactttcta 537
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 162 tgactgatgagaaatacttccagggaag 189 ||||||| |||||||| ||||||||||| Sbjct: 1230783 tgactgacgagaaatatttccagggaag 1230756
>emb|AL645666.10| Mouse DNA sequence from clone RP23-356E21 on chromosome 4, complete sequence Length = 155103 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 gatcctgttgaaattgctcaggct 127 |||||||||||||||||| ||||| Sbjct: 89918 gatcctgttgaaattgctgaggct 89895
>dbj|AB037825.1| Homo sapiens mRNA for KIAA1404 protein, partial cds Length = 7204 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 agatgatgttgcttatgtgc 602 |||||||||||||||||||| Sbjct: 830 agatgatgttgcttatgtgc 811 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,185,766 Number of Sequences: 3902068 Number of extensions: 5185766 Number of successful extensions: 93990 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 93663 Number of HSP's gapped (non-prelim): 310 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)