| Clone Name | bags7f17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2 | 28 | 7.1 | 2 | AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx ca... | 28 | 9.2 |
|---|
>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2| Length = 482 Score = 28.1 bits (61), Expect = 7.1 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -3 Query: 128 PSSSWQDRXIILLSMYSHITFG 63 P S W+D +IL+ ++ ITFG Sbjct: 305 PRSGWRDAAVILMLIHQFITFG 326
>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein| 1) (Polar auxin transport inhibitor resistant protein 1) Length = 485 Score = 27.7 bits (60), Expect = 9.2 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -3 Query: 128 PSSSWQDRXIILLSMYSHITFG 63 P ++W+D +IL+ ++ ITFG Sbjct: 306 PKNAWRDAAVILMLIHQFITFG 327 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,815,763 Number of Sequences: 219361 Number of extensions: 196373 Number of successful extensions: 475 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 475 length of database: 80,573,946 effective HSP length: 19 effective length of database: 76,406,087 effective search space used: 1833746088 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)