| Clone Name | bags7f16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029I18, full insert sequence Length = 2231 Score = 494 bits (249), Expect = e-136 Identities = 381/425 (89%) Strand = Plus / Plus Query: 23 aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82 ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 674 aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 733 Query: 83 gattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaaggc 142 ||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||| Sbjct: 734 gattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacagaaggt 793 Query: 143 gttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttcttggggtt 202 ||||| |||||||| |||||||| |||||||| |||||||| |||||||||||||| || Sbjct: 794 gttgtttcacgcatcgaggtcactccatatgcacatggaacttcagatcttcttggcatt 853 Query: 203 caaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgagcaaggg 262 ||||| |||||||||||||| | ||||||||||||||||| || |||||||| || ||| Sbjct: 854 caaatcgatgcagcaataaatcctggaaacagtggtggaccagcctttaatgaccatggg 913 Query: 263 gaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattggatat 322 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 gaatgcatcggtgtggcatttcaggtgttcaggtcagatgaagctgaaaatattggatat 973 Query: 323 gttattccaactacagttgtatcccatttcttgaatgactatcggaaaaatggaaaatac 382 || |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| Sbjct: 974 gtaattccaactacagttgtatcccatttcttgaacgactatcagaagaatggaaaatat 1033 Query: 383 acaggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaa 442 |||||||||||||||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 1034 acaggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaa 1093 Query: 443 agctt 447 ||||| Sbjct: 1094 agctt 1098
>gb|BT024077.1| Zea mays clone EL01N0513D07 mRNA sequence Length = 2174 Score = 490 bits (247), Expect = e-135 Identities = 399/447 (89%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 1 cttgcgatgctctctgtcgagtaatgaagagttctggcgaggtacagaaccacttcaact 60 |||||| |||| ||||| ||| ||||||||||||||| |||| ||||| ||||||| | Sbjct: 535 cttgcgttgctatctgttgag-aatgaagagttctggagaggaacagaggcacttcattt 593 Query: 61 tggtcgtttgccatgtcttcaggattcagtaactgttgtcgggtatcctcttggtggaga 120 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 594 tggtcgtttgccatgccttcaggattcagtaactgttgtgggatatcctcttggtggaga 653 Query: 121 cactatatctgtgacaaaaggcgttgtatcacgcattgaggtcacaccatatgcgcatgg 180 |||||||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 654 cactatatctgtaacaaaaggcgttgtgtcgcgcattgaggtcactccatatgcacatgg 713 Query: 181 aacatcagatcttcttggggttcaaattgatgcagcaataaacgcaggaaacagtggtgg 240 |||||||||||||||||| |||||||||| ||||| ||||| | ||||||||||| || Sbjct: 714 aacatcagatcttcttggcattcaaattgacgcagccataaatcctggaaacagtggggg 773 Query: 241 accggcatttaatgagcaaggggaatgcattggagtagcatttcaggtgttcaggtcaga 300 ||| || |||||||| |||||||| |||||||| || ||||||||||||| ||||||||| Sbjct: 774 accagcctttaatgatcaaggggagtgcattggtgtggcatttcaggtgtacaggtcaga 833 Query: 301 tgaagctgaaaatattggatatgttattccaactacagttgtatcccatttcttgaatga 360 |||||||| |||| || ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 834 tgaagctg-aaatctttgatatgttattccaactacagttgtatcccatttcttctatga 892 Query: 361 ctatcggaaaaatggaaaatacacaggatttccttgcctgggcgtcctacttcagaaatt 420 ||||| |||||||||||| |||||||||||||| || |||| ||| ||||||||||||| Sbjct: 893 ctatcagaaaaatggaaagtacacaggatttccatgtttgggtgtcttacttcagaaatt 952 Query: 421 ggaaaacccagcactgcgtgaaagctt 447 |||||| || ||| ||||||||||||| Sbjct: 953 ggaaaatccggcattgcgtgaaagctt 979
>dbj|AK059221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D03, full insert sequence Length = 1704 Score = 472 bits (238), Expect = e-130 Identities = 382/430 (88%), Gaps = 5/430 (1%) Strand = Plus / Plus Query: 23 aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82 ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 73 aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 132 Query: 83 gattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaaggc 142 ||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 133 gattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaaaggt 192 Query: 143 gttgtatcacgcattg-----aggtcacaccatatgcgcatggaacatcagatcttcttg 197 ||||| |||||||| | ||||||| |||||||| |||||||| ||||||||||||| Sbjct: 193 gttgtttcacgcatcgagcccaggtcactccatatgcacatggaacttcagatcttcttg 252 Query: 198 gggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgagc 257 | ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| | Sbjct: 253 gcattcaaatcgatgcagcaataaatcctggaaacagtggtggaccagcctttaatgacc 312 Query: 258 aaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattg 317 | ||||||||||| || || |||||||||||||||||||||||||||||||||||||||| Sbjct: 313 atggggaatgcatcggtgtggcatttcaggtgttcaggtcagatgaagctgaaaatattg 372 Query: 318 gatatgttattccaactacagttgtatcccatttcttgaatgactatcggaaaaatggaa 377 ||||||| |||||||||||||||||||||||||||||||| ||||||| ||| ||||||| Sbjct: 373 gatatgtaattccaactacagttgtatcccatttcttgaacgactatcagaagaatggaa 432 Query: 378 aatacacaggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgc 437 |||| |||||||||||||||||||| || || ||||| |||||||||||||| || ||| Sbjct: 433 aatatacaggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgc 492 Query: 438 gtgaaagctt 447 |||||||||| Sbjct: 493 gtgaaagctt 502
>dbj|AK071919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E14, full insert sequence Length = 2157 Score = 444 bits (224), Expect = e-121 Identities = 374/425 (88%), Gaps = 8/425 (1%) Strand = Plus / Plus Query: 23 aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82 ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 608 aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 667 Query: 83 gattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaaggc 142 ||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 668 gattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaaaggt 727 Query: 143 gttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttcttggggtt 202 ||||| |||||||| |||||||| |||||||| |||||||| |||||||||||||| || Sbjct: 728 gttgtttcacgcatcgaggtcactccatatgcacatggaacttcagatcttcttggcatt 787 Query: 203 caaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgagcaaggg 262 ||||| |||||||||||||| | ||||||||||||||||| || |||||||| || ||| Sbjct: 788 caaatcgatgcagcaataaatcctggaaacagtggtggaccagcctttaatgaccatggg 847 Query: 263 gaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattggatat 322 |||||||| || || ||||||| |||||||||||||||||||||||||||||| Sbjct: 848 gaatgcatcggtgtggcatttc--------aggtcagatgaagctgaaaatattggatat 899 Query: 323 gttattccaactacagttgtatcccatttcttgaatgactatcggaaaaatggaaaatac 382 || |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| Sbjct: 900 gtaattccaactacagttgtatcccatttcttgaacgactatcagaagaatggaaaatat 959 Query: 383 acaggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaa 442 |||||||||||||||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 960 acaggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaa 1019 Query: 443 agctt 447 ||||| Sbjct: 1020 agctt 1024
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Plus Query: 285 aggtgttcaggtcagatgaagctgaaaatattggatatgttattccaactacagttgtat 344 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 116983 aggtgttcaggtcagatgaagctgaaaatattggatatgtaattccaactacagttgtat 117042 Query: 345 cccatttcttgaatgactatcggaaaaatggaaaatacacagg 387 ||||||||||||| ||||||| ||| ||||||||||| ||||| Sbjct: 117043 cccatttcttgaacgactatcagaagaatggaaaatatacagg 117085 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 79 tcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaa 138 ||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||| Sbjct: 115145 tcaggattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaa 115204 Query: 139 aggcgttgtatcacgcattgaggt 162 ||| ||||| |||||||| ||||| Sbjct: 115205 aggtgttgtttcacgcatcgaggt 115228 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 159 aggtcacaccatatgcgcatggaacatcagatcttcttggggttcaaattgatgcagcaa 218 ||||||| |||||||| |||||||| |||||||||||||| ||||||| |||||||||| Sbjct: 115909 aggtcactccatatgcacatggaacttcagatcttcttggcattcaaatcgatgcagcaa 115968 Query: 219 taaa 222 |||| Sbjct: 115969 taaa 115972 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 225 caggaaacagtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttc 284 ||||||||||||||||||| || |||||||| || ||||||||||| || || ||||||| Sbjct: 116139 caggaaacagtggtggaccagcctttaatgaccatggggaatgcatcggtgtggcatttc 116198 Query: 285 aggt 288 |||| Sbjct: 116199 aggt 116202 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 385 aggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaaag 444 |||||||||||||||||| || || ||||| |||||||||||||| || |||||||||| Sbjct: 117450 aggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaaag 117509 Query: 445 ctt 447 ||| Sbjct: 117510 ctt 117512 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 23 aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82 ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 114895 aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 114954 Query: 83 g 83 | Sbjct: 114955 g 114955
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Plus Query: 285 aggtgttcaggtcagatgaagctgaaaatattggatatgttattccaactacagttgtat 344 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2670463 aggtgttcaggtcagatgaagctgaaaatattggatatgtaattccaactacagttgtat 2670522 Query: 345 cccatttcttgaatgactatcggaaaaatggaaaatacacagg 387 ||||||||||||| ||||||| ||| ||||||||||| ||||| Sbjct: 2670523 cccatttcttgaacgactatcagaagaatggaaaatatacagg 2670565 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 79 tcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaa 138 ||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||| Sbjct: 2668625 tcaggattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaa 2668684 Query: 139 aggcgttgtatcacgcattgaggt 162 ||| ||||| |||||||| ||||| Sbjct: 2668685 aggtgttgtttcacgcatcgaggt 2668708 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 159 aggtcacaccatatgcgcatggaacatcagatcttcttggggttcaaattgatgcagcaa 218 ||||||| |||||||| |||||||| |||||||||||||| ||||||| |||||||||| Sbjct: 2669389 aggtcactccatatgcacatggaacttcagatcttcttggcattcaaatcgatgcagcaa 2669448 Query: 219 taaa 222 |||| Sbjct: 2669449 taaa 2669452 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 225 caggaaacagtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttc 284 ||||||||||||||||||| || |||||||| || ||||||||||| || || ||||||| Sbjct: 2669619 caggaaacagtggtggaccagcctttaatgaccatggggaatgcatcggtgtggcatttc 2669678 Query: 285 aggt 288 |||| Sbjct: 2669679 aggt 2669682 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 385 aggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaaag 444 |||||||||||||||||| || || ||||| |||||||||||||| || |||||||||| Sbjct: 2670930 aggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaaag 2670989 Query: 445 ctt 447 ||| Sbjct: 2670990 ctt 2670992 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 23 aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82 ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 2668375 aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 2668434 Query: 83 g 83 | Sbjct: 2668435 g 2668435
>ref|NM_130361.3| Arabidopsis thaliana DEGP2; serine-type peptidase/ trypsin AT2G47940 (DEGP2) mRNA, complete cds Length = 2214 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct: 714 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 773 Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196 ||||| ||||||||||| || ||||| ||| | || || |||||| |||| || | ||| Sbjct: 774 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 833 Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256 || ||||||| || || || ||||| |||| || |||||||| || ||||| || || Sbjct: 834 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 893 Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316 || |||||||| |||||||||||||| ||||| | ||| || || ||| ||||||||||| Sbjct: 894 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 953 Query: 317 ggatatgttattccaactacagttgt 342 |||||||| |||||||| || ||||| Sbjct: 954 ggatatgtgattccaacaaccgttgt 979
>gb|AF349516.1| Arabidopsis thaliana putative DegP2 protease (At2g47940) mRNA, complete cds Length = 1872 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct: 646 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 705 Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196 ||||| ||||||||||| || ||||| ||| | || || |||||| |||| || | ||| Sbjct: 706 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 765 Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256 || ||||||| || || || ||||| |||| || |||||||| || ||||| || || Sbjct: 766 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 825 Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316 || |||||||| |||||||||||||| ||||| | ||| || || ||| ||||||||||| Sbjct: 826 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 885 Query: 317 ggatatgttattccaactacagttgt 342 |||||||| |||||||| || ||||| Sbjct: 886 ggatatgtgattccaacaaccgttgt 911
>gb|AF326865.1| Arabidopsis thaliana putative DegP2 protease (At2g47940) mRNA, complete cds Length = 2171 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct: 656 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 715 Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196 ||||| ||||||||||| || ||||| ||| | || || |||||| |||| || | ||| Sbjct: 716 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 775 Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256 || ||||||| || || || ||||| |||| || |||||||| || ||||| || || Sbjct: 776 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 835 Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316 || |||||||| |||||||||||||| ||||| | ||| || || ||| ||||||||||| Sbjct: 836 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 895 Query: 317 ggatatgttattccaactacagttgt 342 |||||||| |||||||| || ||||| Sbjct: 896 ggatatgtgattccaacaaccgttgt 921
>gb|AY102139.1| Arabidopsis thaliana At2g47940/F17A22.33 mRNA, complete cds Length = 1824 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct: 646 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 705 Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196 ||||| ||||||||||| || ||||| ||| | || || |||||| |||| || | ||| Sbjct: 706 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 765 Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256 || ||||||| || || || ||||| |||| || |||||||| || ||||| || || Sbjct: 766 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 825 Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316 || |||||||| |||||||||||||| ||||| | ||| || || ||| ||||||||||| Sbjct: 826 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 885 Query: 317 ggatatgttattccaactacagttgt 342 |||||||| |||||||| || ||||| Sbjct: 886 ggatatgtgattccaacaaccgttgt 911
>gb|AY075700.1| Arabidopsis thaliana At2g47940/F17A22.33 mRNA, complete cds Length = 2155 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct: 656 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 715 Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196 ||||| ||||||||||| || ||||| ||| | || || |||||| |||| || | ||| Sbjct: 716 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 775 Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256 || ||||||| || || || ||||| |||| || |||||||| || ||||| || || Sbjct: 776 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 835 Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316 || |||||||| |||||||||||||| ||||| | ||| || || ||| ||||||||||| Sbjct: 836 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 895 Query: 317 ggatatgttattccaactacagttgt 342 |||||||| |||||||| || ||||| Sbjct: 896 ggatatgtgattccaacaaccgttgt 921
>gb|AF245171.1|AF245171 Arabidopsis thaliana DegP2 protease (DEGP2) mRNA, complete cds; nuclear gene for chloroplast product Length = 2280 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct: 714 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 773 Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196 ||||| ||||||||||| || ||||| ||| | || || |||||| |||| || | ||| Sbjct: 774 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 833 Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256 || ||||||| || || || ||||| |||| || |||||||| || ||||| || || Sbjct: 834 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 893 Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316 || |||||||| |||||||||||||| ||||| | ||| || || ||| ||||||||||| Sbjct: 894 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 953 Query: 317 ggatatgttattccaactacagttgt 342 |||||||| |||||||| || ||||| Sbjct: 954 ggatatgtgattccaacaaccgttgt 979
>emb|BX819857.1|CNS0AA34 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS39ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2210 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 260 ggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattgga 319 |||||||| |||||||||||||| ||||| | ||| || || ||| |||||||||||||| Sbjct: 924 ggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatattgga 983 Query: 320 tatgttattccaactacagttgt 342 ||||| |||||||| || ||||| Sbjct: 984 tatgtgattccaacaaccgttgt 1006 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct: 734 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 793 Query: 137 aaaggcgttgtatcacgcattgaggt 162 ||||| ||||||||||| || ||||| Sbjct: 794 aaaggggttgtatcacgtatagaggt 819
>gb|AC006072.4| Arabidopsis thaliana chromosome 2 clone T9J23 map CIC06C03, complete sequence Length = 81565 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 80 caggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaa 139 ||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||||| Sbjct: 23796 caggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttacaaaa 23737 Query: 140 ggcgttgtatcacgcattgaggt 162 || ||||||||||| || ||||| Sbjct: 23736 ggggttgtatcacgtatagaggt 23714 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 306 ctgaaaatattggatatgttattccaactacagttgt 342 ||||||||||||||||||| |||||||| || ||||| Sbjct: 23231 ctgaaaatattggatatgtgattccaacaaccgttgt 23195 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 233 agtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttcaggt 288 |||||||| || ||||| || || || |||||||| |||||||||||||| ||||| Sbjct: 23388 agtggtggccctgcattcaacgaccagggggaatgtattggagtagcattccaggt 23333
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 80 caggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaa 139 ||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||||| Sbjct: 88107 caggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttacaaaa 88048 Query: 140 ggcgttgtatcacgcattgaggt 162 || ||||||||||| || ||||| Sbjct: 88047 ggggttgtatcacgtatagaggt 88025 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 306 ctgaaaatattggatatgttattccaactacagttgt 342 ||||||||||||||||||| |||||||| || ||||| Sbjct: 87542 ctgaaaatattggatatgtgattccaacaaccgttgt 87506 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 233 agtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttcaggt 288 |||||||| || ||||| || || || |||||||| |||||||||||||| ||||| Sbjct: 87699 agtggtggccctgcattcaacgaccagggggaatgtattggagtagcattccaggt 87644
>ref|XM_467732.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 ||||||||| | || |||||||| || ||||| |||| |||||||| |||||||||||| Sbjct: 613 cttcaggatgctgtgactgttgttggttatccaattggaggagacacaatatctgtgaca 672 Query: 137 a 137 | Sbjct: 673 a 673
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 ||||||||| | || |||||||| || ||||| |||| |||||||| |||||||||||| Sbjct: 31118552 cttcaggatgctgtgactgttgttggttatccaattggaggagacacaatatctgtgaca 31118493 Query: 137 a 137 | Sbjct: 31118492 a 31118492
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 77 cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136 ||||||||| | || |||||||| || ||||| |||| |||||||| |||||||||||| Sbjct: 107776 cttcaggatgctgtgactgttgttggttatccaattggaggagacacaatatctgtgaca 107717 Query: 137 a 137 | Sbjct: 107716 a 107716
>gb|AF539999.1| Mamestra configurata nucleopolyhedrovirus A 90/4, complete genome Length = 153656 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 agatgaagctgaaaatattgga 319 |||||||||||||||||||||| Sbjct: 16660 agatgaagctgaaaatattgga 16639
>gb|U59461.2|MBU59461 Mamestra configurata NPV-A strain 90/2, complete genome Length = 155060 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 agatgaagctgaaaatattgga 319 |||||||||||||||||||||| Sbjct: 16652 agatgaagctgaaaatattgga 16631
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 203 caaattgatgcagcaataaacgcaggaaacagtggtggacc 243 |||||||| || ||||| ||| ||||||||||||| ||||| Sbjct: 734066 caaattgacgccgcaatcaacccaggaaacagtggcggacc 734026
>gb|AC154710.2| Mus musculus BAC clone RP24-357L12 from chromosome 14, complete sequence Length = 163421 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 acttcagaaattggaaaaccc 429 ||||||||||||||||||||| Sbjct: 59756 acttcagaaattggaaaaccc 59736
>ref|XM_672636.1| Plasmodium berghei strain ANKA heat shock protein (PB000957.03.0) partial mRNA Length = 2142 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 tgaaaatattggatatgttat 327 ||||||||||||||||||||| Sbjct: 1920 tgaaaatattggatatgttat 1940
>emb|AL356275.20| Human DNA sequence from clone RP11-328D5 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, the CD34 gene for CD34 antigen and the 3' end of the PLXNA2 gene for plexin A2, complete sequence Length = 198906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 acacaggatttccttgcctgg 401 ||||||||||||||||||||| Sbjct: 148361 acacaggatttccttgcctgg 148381
>emb|AL596164.1| Listeria innocua Clip11262 complete genome, segment 2/12 Length = 224650 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 209 gatgcagcaataaacgcaggaaacagtggtgga 241 ||||||||||| ||| |||| |||||||||||| Sbjct: 104414 gatgcagcaattaacccaggtaacagtggtgga 104446
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 203 caaattgatgcagcaataaacgcaggaaacagtggtggacc 243 |||| |||||| ||||||| ||||| |||||||||||||| Sbjct: 627498 caaactgatgcttcaataaatgcaggtaacagtggtggacc 627458
>emb|AL035091.2|HS88L2 Human DNA sequence from clone XX-D88L2 on chromosome 1q32.2-32.3, complete sequence Length = 160771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 acacaggatttccttgcctgg 401 ||||||||||||||||||||| Sbjct: 145189 acacaggatttccttgcctgg 145169
>gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, complete sequence Length = 208309 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 tgaaaatattggatatgtta 326 |||||||||||||||||||| Sbjct: 54213 tgaaaatattggatatgtta 54232
>ref|XM_421530.1| PREDICTED: Gallus gallus similar to J domain containing protein 1 isoform a; J domain containing protein 1; J domain protein 1 (LOC423647), mRNA Length = 1743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 aaaatggaaaatacacagga 388 |||||||||||||||||||| Sbjct: 692 aaaatggaaaatacacagga 711
>gb|AC158542.2| Pan troglodytes BAC clone CH251-262O17 from chromosome y, complete sequence Length = 174274 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 134148 ttccaactacagttgtatcc 134167
>emb|AJ004799.1|HSSYBL1 Homo sapiens SYBL1 gene Length = 39287 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tggaaaatacacaggatttc 392 |||||||||||||||||||| Sbjct: 1425 tggaaaatacacaggatttc 1406
>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence Length = 209838 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccatgtcttcaggattcagt 90 |||||||||||||||||||| Sbjct: 192989 ccatgtcttcaggattcagt 192970
>gb|AC006484.2| Homo sapiens chromosome 5, clone hRPK.448_K_10, complete sequence Length = 156814 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tttgccatgtcttcaggatt 86 |||||||||||||||||||| Sbjct: 51002 tttgccatgtcttcaggatt 51021
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 10157522 ttccaactacagttgtatcc 10157541
>ref|NM_009148.2| Mus musculus exocyst complex component 4 (Exoc4), mRNA Length = 3723 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcaggtcagatgaagctgaa 310 |||||||||||||||||||| Sbjct: 3637 tcaggtcagatgaagctgaa 3618
>gb|DP000055.1| Pan troglodytes chromosome Y chry_random_1 genomic scaffold Length = 276070 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 71564 ttccaactacagttgtatcc 71583
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 134892 ttccaactacagttgtatcc 134911
>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete sequence Length = 225200 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 150637 ttccaactacagttgtatcc 150656
>gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, complete sequence Length = 133085 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gaaaatattggatatgttat 327 |||||||||||||||||||| Sbjct: 5740 gaaaatattggatatgttat 5721
>emb|BX950610.2| Gallus gallus finished cDNA, clone ChEST529k20 Length = 773 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 aaaatggaaaatacacagga 388 |||||||||||||||||||| Sbjct: 636 aaaatggaaaatacacagga 655
>dbj|AK028250.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3002004E07 product:SEC8 (S. cerevisiae), full insert sequence Length = 3440 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcaggtcagatgaagctgaa 310 |||||||||||||||||||| Sbjct: 3369 tcaggtcagatgaagctgaa 3350
>gb|AC153817.6| Mus musculus BAC RP23-11P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 247508 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcaggtcagatgaagctgaa 310 |||||||||||||||||||| Sbjct: 28164 tcaggtcagatgaagctgaa 28145
>dbj|AK173235.1| Mus musculus mRNA for mKIAA1699 protein Length = 3711 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcaggtcagatgaagctgaa 310 |||||||||||||||||||| Sbjct: 3640 tcaggtcagatgaagctgaa 3621
>gb|AC163766.3| Pan troglodytes BAC clone CH251-115P4 from chromosome y, complete sequence Length = 185225 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 73636 ttccaactacagttgtatcc 73617
>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete sequence Length = 207364 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 10943 ttccaactacagttgtatcc 10962
>gb|AC155915.2| Mus musculus 6 BAC RP24-462N21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152279 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 tcaggtcagatgaagctgaa 310 |||||||||||||||||||| Sbjct: 23588 tcaggtcagatgaagctgaa 23607
>emb|AJ271735.1|HSA271735 Homo sapiens Xq pseudoautosomal region; segment 1/2 Length = 240000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tggaaaatacacaggatttc 392 |||||||||||||||||||| Sbjct: 239314 tggaaaatacacaggatttc 239295
>gb|AC163728.4| Pan troglodytes BAC clone CH251-589C1 from chromosome y, complete sequence Length = 206451 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 6956 ttccaactacagttgtatcc 6975
>gb|AC163716.3| Pan troglodytes BAC clone CH251-828J24 from chromosome y, complete sequence Length = 165274 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 159574 ttccaactacagttgtatcc 159555
>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204618 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccatgtcttcaggattcagt 90 |||||||||||||||||||| Sbjct: 161135 ccatgtcttcaggattcagt 161154
>dbj|AB078943.1| Forficula scudderi ORF1 gene, ORF2 pseudogene for gag-like protein, reverse transcriptase, partial cds, clone:HalFs1-10 Length = 3573 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 taatgagcaaggggaatgca 269 |||||||||||||||||||| Sbjct: 2410 taatgagcaaggggaatgca 2429
>dbj|AB078942.1| Forficula scudderi ORF1 gene, ORF2 pseudogene for gag-like protein, reverse transcriptase, partial cds, clone:HalFs1-7 Length = 3595 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 taatgagcaaggggaatgca 269 |||||||||||||||||||| Sbjct: 2432 taatgagcaaggggaatgca 2451
>dbj|AB078941.1| Forficula scudderi ORF1 gene, ORF2 pseudogene for gag-like protein, reverse transcriptase, partial cds, clone:HalFs1-5 Length = 3573 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 taatgagcaaggggaatgca 269 |||||||||||||||||||| Sbjct: 2410 taatgagcaaggggaatgca 2429
>gb|BC034644.1| Mus musculus exocyst complex component 4, mRNA (cDNA clone MGC:36178 IMAGE:5355276), complete cds Length = 3723 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcaggtcagatgaagctgaa 310 |||||||||||||||||||| Sbjct: 3637 tcaggtcagatgaagctgaa 3618
>gb|AC163727.3| Pan troglodytes BAC clone CH251-1132L6 from chromosome y, complete sequence Length = 191546 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttccaactacagttgtatcc 346 |||||||||||||||||||| Sbjct: 71559 ttccaactacagttgtatcc 71578
>emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chromosome 2, complete sequence Length = 193718 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 agctgaaaatattggatatg 323 |||||||||||||||||||| Sbjct: 89410 agctgaaaatattggatatg 89391 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,085,098 Number of Sequences: 3902068 Number of extensions: 4085098 Number of successful extensions: 73650 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73461 Number of HSP's gapped (non-prelim): 188 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)