ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7f16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK065630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 494 e-136
2gb|BT024077.1| Zea mays clone EL01N0513D07 mRNA sequence 490 e-135
3dbj|AK059221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 472 e-130
4dbj|AK071919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 444 e-121
5gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
7ref|NM_130361.3| Arabidopsis thaliana DEGP2; serine-type peptida... 139 9e-30
8gb|AF349516.1| Arabidopsis thaliana putative DegP2 protease (At2... 139 9e-30
9gb|AF326865.1| Arabidopsis thaliana putative DegP2 protease (At2... 139 9e-30
10gb|AY102139.1| Arabidopsis thaliana At2g47940/F17A22.33 mRNA, co... 139 9e-30
11gb|AY075700.1| Arabidopsis thaliana At2g47940/F17A22.33 mRNA, co... 139 9e-30
12gb|AF245171.1|AF245171 Arabidopsis thaliana DegP2 protease (DEGP... 139 9e-30
13emb|BX819857.1|CNS0AA34 Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
14gb|AC006072.4| Arabidopsis thaliana chromosome 2 clone T9J23 map... 70 7e-09
15gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 ma... 70 7e-09
16ref|XM_467732.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
18dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
19gb|AF539999.1| Mamestra configurata nucleopolyhedrovirus A 90/4,... 44 0.39
20gb|U59461.2|MBU59461 Mamestra configurata NPV-A strain 90/2, com... 44 0.39
21gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 42 1.5
22gb|AC154710.2| Mus musculus BAC clone RP24-357L12 from chromosom... 42 1.5
23ref|XM_672636.1| Plasmodium berghei strain ANKA heat shock prote... 42 1.5
24emb|AL356275.20| Human DNA sequence from clone RP11-328D5 on chr... 42 1.5
25emb|AL596164.1| Listeria innocua Clip11262 complete genome, segm... 42 1.5
26gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 42 1.5
27emb|AL035091.2|HS88L2 Human DNA sequence from clone XX-D88L2 on ... 42 1.5
28gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, c... 40 6.1
29ref|XM_421530.1| PREDICTED: Gallus gallus similar to J domain co... 40 6.1
30gb|AC158542.2| Pan troglodytes BAC clone CH251-262O17 from chrom... 40 6.1
31emb|AJ004799.1|HSSYBL1 Homo sapiens SYBL1 gene 40 6.1
32gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, co... 40 6.1
33gb|AC006484.2| Homo sapiens chromosome 5, clone hRPK.448_K_10, c... 40 6.1
34gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 6.1
35ref|NM_009148.2| Mus musculus exocyst complex component 4 (Exoc4... 40 6.1
36gb|DP000055.1| Pan troglodytes chromosome Y chry_random_1 genomi... 40 6.1
37gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomi... 40 6.1
38gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromo... 40 6.1
39gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, comp... 40 6.1
40emb|BX950610.2| Gallus gallus finished cDNA, clone ChEST529k20 40 6.1
41dbj|AK028250.1| Mus musculus 12 days embryo head cDNA, RIKEN ful... 40 6.1
42gb|AC153817.6| Mus musculus BAC RP23-11P24 (Roswell Park Cancer... 40 6.1
43dbj|AK173235.1| Mus musculus mRNA for mKIAA1699 protein 40 6.1
44gb|AC163766.3| Pan troglodytes BAC clone CH251-115P4 from chromo... 40 6.1
45gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chrom... 40 6.1
46gb|AC155915.2| Mus musculus 6 BAC RP24-462N21 (Roswell Park Canc... 40 6.1
47emb|AJ271735.1|HSA271735 Homo sapiens Xq pseudoautosomal region;... 40 6.1
48gb|AC163728.4| Pan troglodytes BAC clone CH251-589C1 from chromo... 40 6.1
49gb|AC163716.3| Pan troglodytes BAC clone CH251-828J24 from chrom... 40 6.1
50gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Can... 40 6.1
51dbj|AB078943.1| Forficula scudderi ORF1 gene, ORF2 pseudogene fo... 40 6.1
52dbj|AB078942.1| Forficula scudderi ORF1 gene, ORF2 pseudogene fo... 40 6.1
53dbj|AB078941.1| Forficula scudderi ORF1 gene, ORF2 pseudogene fo... 40 6.1
54gb|BC034644.1| Mus musculus exocyst complex component 4, mRNA (c... 40 6.1
55gb|AC163727.3| Pan troglodytes BAC clone CH251-1132L6 from chrom... 40 6.1
56emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chr... 40 6.1

>dbj|AK065630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029I18, full
            insert sequence
          Length = 2231

 Score =  494 bits (249), Expect = e-136
 Identities = 381/425 (89%)
 Strand = Plus / Plus

                                                                        
Query: 23   aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82
            ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 674  aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 733

                                                                        
Query: 83   gattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaaggc 142
            ||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||| 
Sbjct: 734  gattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacagaaggt 793

                                                                        
Query: 143  gttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttcttggggtt 202
            ||||| |||||||| |||||||| |||||||| |||||||| ||||||||||||||  ||
Sbjct: 794  gttgtttcacgcatcgaggtcactccatatgcacatggaacttcagatcttcttggcatt 853

                                                                        
Query: 203  caaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgagcaaggg 262
            ||||| ||||||||||||||  | ||||||||||||||||| || |||||||| || |||
Sbjct: 854  caaatcgatgcagcaataaatcctggaaacagtggtggaccagcctttaatgaccatggg 913

                                                                        
Query: 263  gaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattggatat 322
            |||||||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  gaatgcatcggtgtggcatttcaggtgttcaggtcagatgaagctgaaaatattggatat 973

                                                                        
Query: 323  gttattccaactacagttgtatcccatttcttgaatgactatcggaaaaatggaaaatac 382
            || |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| 
Sbjct: 974  gtaattccaactacagttgtatcccatttcttgaacgactatcagaagaatggaaaatat 1033

                                                                        
Query: 383  acaggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaa 442
            |||||||||||||||||||| || || ||||| |||||||||||||| ||  ||||||||
Sbjct: 1034 acaggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaa 1093

                 
Query: 443  agctt 447
            |||||
Sbjct: 1094 agctt 1098



to top

>gb|BT024077.1| Zea mays clone EL01N0513D07 mRNA sequence
          Length = 2174

 Score =  490 bits (247), Expect = e-135
 Identities = 399/447 (89%), Gaps = 2/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgcgatgctctctgtcgagtaatgaagagttctggcgaggtacagaaccacttcaact 60
           |||||| |||| ||||| ||| ||||||||||||||| |||| |||||  |||||||  |
Sbjct: 535 cttgcgttgctatctgttgag-aatgaagagttctggagaggaacagaggcacttcattt 593

                                                                       
Query: 61  tggtcgtttgccatgtcttcaggattcagtaactgttgtcgggtatcctcttggtggaga 120
           ||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 594 tggtcgtttgccatgccttcaggattcagtaactgttgtgggatatcctcttggtggaga 653

                                                                       
Query: 121 cactatatctgtgacaaaaggcgttgtatcacgcattgaggtcacaccatatgcgcatgg 180
           |||||||||||| |||||||||||||| || |||||||||||||| |||||||| |||||
Sbjct: 654 cactatatctgtaacaaaaggcgttgtgtcgcgcattgaggtcactccatatgcacatgg 713

                                                                       
Query: 181 aacatcagatcttcttggggttcaaattgatgcagcaataaacgcaggaaacagtggtgg 240
           ||||||||||||||||||  |||||||||| ||||| |||||  | ||||||||||| ||
Sbjct: 714 aacatcagatcttcttggcattcaaattgacgcagccataaatcctggaaacagtggggg 773

                                                                       
Query: 241 accggcatttaatgagcaaggggaatgcattggagtagcatttcaggtgttcaggtcaga 300
           ||| || |||||||| |||||||| |||||||| || ||||||||||||| |||||||||
Sbjct: 774 accagcctttaatgatcaaggggagtgcattggtgtggcatttcaggtgtacaggtcaga 833

                                                                       
Query: 301 tgaagctgaaaatattggatatgttattccaactacagttgtatcccatttcttgaatga 360
           |||||||| |||| || |||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 834 tgaagctg-aaatctttgatatgttattccaactacagttgtatcccatttcttctatga 892

                                                                       
Query: 361 ctatcggaaaaatggaaaatacacaggatttccttgcctgggcgtcctacttcagaaatt 420
           ||||| |||||||||||| |||||||||||||| ||  |||| ||| |||||||||||||
Sbjct: 893 ctatcagaaaaatggaaagtacacaggatttccatgtttgggtgtcttacttcagaaatt 952

                                      
Query: 421 ggaaaacccagcactgcgtgaaagctt 447
           |||||| || ||| |||||||||||||
Sbjct: 953 ggaaaatccggcattgcgtgaaagctt 979



to top

>dbj|AK059221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D03, full
           insert sequence
          Length = 1704

 Score =  472 bits (238), Expect = e-130
 Identities = 382/430 (88%), Gaps = 5/430 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82
           ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 73  aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 132

                                                                       
Query: 83  gattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaaggc 142
           ||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||| 
Sbjct: 133 gattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaaaggt 192

                                                                       
Query: 143 gttgtatcacgcattg-----aggtcacaccatatgcgcatggaacatcagatcttcttg 197
           ||||| |||||||| |     ||||||| |||||||| |||||||| |||||||||||||
Sbjct: 193 gttgtttcacgcatcgagcccaggtcactccatatgcacatggaacttcagatcttcttg 252

                                                                       
Query: 198 gggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgagc 257
           |  ||||||| ||||||||||||||  | ||||||||||||||||| || |||||||| |
Sbjct: 253 gcattcaaatcgatgcagcaataaatcctggaaacagtggtggaccagcctttaatgacc 312

                                                                       
Query: 258 aaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattg 317
           | ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atggggaatgcatcggtgtggcatttcaggtgttcaggtcagatgaagctgaaaatattg 372

                                                                       
Query: 318 gatatgttattccaactacagttgtatcccatttcttgaatgactatcggaaaaatggaa 377
           ||||||| |||||||||||||||||||||||||||||||| ||||||| ||| |||||||
Sbjct: 373 gatatgtaattccaactacagttgtatcccatttcttgaacgactatcagaagaatggaa 432

                                                                       
Query: 378 aatacacaggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgc 437
           |||| |||||||||||||||||||| || || ||||| |||||||||||||| ||  |||
Sbjct: 433 aatatacaggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgc 492

                     
Query: 438 gtgaaagctt 447
           ||||||||||
Sbjct: 493 gtgaaagctt 502



to top

>dbj|AK071919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E14, full
            insert sequence
          Length = 2157

 Score =  444 bits (224), Expect = e-121
 Identities = 374/425 (88%), Gaps = 8/425 (1%)
 Strand = Plus / Plus

                                                                        
Query: 23   aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82
            ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 608  aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 667

                                                                        
Query: 83   gattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaaggc 142
            ||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||| 
Sbjct: 668  gattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaaaggt 727

                                                                        
Query: 143  gttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttcttggggtt 202
            ||||| |||||||| |||||||| |||||||| |||||||| ||||||||||||||  ||
Sbjct: 728  gttgtttcacgcatcgaggtcactccatatgcacatggaacttcagatcttcttggcatt 787

                                                                        
Query: 203  caaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgagcaaggg 262
            ||||| ||||||||||||||  | ||||||||||||||||| || |||||||| || |||
Sbjct: 788  caaatcgatgcagcaataaatcctggaaacagtggtggaccagcctttaatgaccatggg 847

                                                                        
Query: 263  gaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattggatat 322
            |||||||| || || |||||||        ||||||||||||||||||||||||||||||
Sbjct: 848  gaatgcatcggtgtggcatttc--------aggtcagatgaagctgaaaatattggatat 899

                                                                        
Query: 323  gttattccaactacagttgtatcccatttcttgaatgactatcggaaaaatggaaaatac 382
            || |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| 
Sbjct: 900  gtaattccaactacagttgtatcccatttcttgaacgactatcagaagaatggaaaatat 959

                                                                        
Query: 383  acaggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaa 442
            |||||||||||||||||||| || || ||||| |||||||||||||| ||  ||||||||
Sbjct: 960  acaggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaa 1019

                 
Query: 443  agctt 447
            |||||
Sbjct: 1020 agctt 1024



to top

>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score =  165 bits (83), Expect = 2e-37
 Identities = 98/103 (95%)
 Strand = Plus / Plus

                                                                          
Query: 285    aggtgttcaggtcagatgaagctgaaaatattggatatgttattccaactacagttgtat 344
              |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 116983 aggtgttcaggtcagatgaagctgaaaatattggatatgtaattccaactacagttgtat 117042

                                                         
Query: 345    cccatttcttgaatgactatcggaaaaatggaaaatacacagg 387
              ||||||||||||| ||||||| ||| ||||||||||| |||||
Sbjct: 117043 cccatttcttgaacgactatcagaagaatggaaaatatacagg 117085



 Score =  111 bits (56), Expect = 2e-21
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                          
Query: 79     tcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaa 138
              ||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 115145 tcaggattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaa 115204

                                      
Query: 139    aggcgttgtatcacgcattgaggt 162
              ||| ||||| |||||||| |||||
Sbjct: 115205 aggtgttgtttcacgcatcgaggt 115228



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                          
Query: 159    aggtcacaccatatgcgcatggaacatcagatcttcttggggttcaaattgatgcagcaa 218
              ||||||| |||||||| |||||||| ||||||||||||||  ||||||| ||||||||||
Sbjct: 115909 aggtcactccatatgcacatggaacttcagatcttcttggcattcaaatcgatgcagcaa 115968

                  
Query: 219    taaa 222
              ||||
Sbjct: 115969 taaa 115972



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                          
Query: 225    caggaaacagtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttc 284
              ||||||||||||||||||| || |||||||| || ||||||||||| || || |||||||
Sbjct: 116139 caggaaacagtggtggaccagcctttaatgaccatggggaatgcatcggtgtggcatttc 116198

                  
Query: 285    aggt 288
              ||||
Sbjct: 116199 aggt 116202



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                          
Query: 385    aggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaaag 444
              |||||||||||||||||| || || ||||| |||||||||||||| ||  ||||||||||
Sbjct: 117450 aggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaaag 117509

                 
Query: 445    ctt 447
              |||
Sbjct: 117510 ctt 117512



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                          
Query: 23     aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82
              ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 114895 aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 114954

               
Query: 83     g 83
              |
Sbjct: 114955 g 114955



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  165 bits (83), Expect = 2e-37
 Identities = 98/103 (95%)
 Strand = Plus / Plus

                                                                           
Query: 285     aggtgttcaggtcagatgaagctgaaaatattggatatgttattccaactacagttgtat 344
               |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2670463 aggtgttcaggtcagatgaagctgaaaatattggatatgtaattccaactacagttgtat 2670522

                                                          
Query: 345     cccatttcttgaatgactatcggaaaaatggaaaatacacagg 387
               ||||||||||||| ||||||| ||| ||||||||||| |||||
Sbjct: 2670523 cccatttcttgaacgactatcagaagaatggaaaatatacagg 2670565



 Score =  111 bits (56), Expect = 2e-21
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                           
Query: 79      tcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaa 138
               ||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 2668625 tcaggattcagtaactgttgtgggatatcctcttggtggagacacgatatctgtaacaaa 2668684

                                       
Query: 139     aggcgttgtatcacgcattgaggt 162
               ||| ||||| |||||||| |||||
Sbjct: 2668685 aggtgttgtttcacgcatcgaggt 2668708



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                           
Query: 159     aggtcacaccatatgcgcatggaacatcagatcttcttggggttcaaattgatgcagcaa 218
               ||||||| |||||||| |||||||| ||||||||||||||  ||||||| ||||||||||
Sbjct: 2669389 aggtcactccatatgcacatggaacttcagatcttcttggcattcaaatcgatgcagcaa 2669448

                   
Query: 219     taaa 222
               ||||
Sbjct: 2669449 taaa 2669452



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                           
Query: 225     caggaaacagtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttc 284
               ||||||||||||||||||| || |||||||| || ||||||||||| || || |||||||
Sbjct: 2669619 caggaaacagtggtggaccagcctttaatgaccatggggaatgcatcggtgtggcatttc 2669678

                   
Query: 285     aggt 288
               ||||
Sbjct: 2669679 aggt 2669682



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                           
Query: 385     aggatttccttgcctgggcgtcctacttcagaaattggaaaacccagcactgcgtgaaag 444
               |||||||||||||||||| || || ||||| |||||||||||||| ||  ||||||||||
Sbjct: 2670930 aggatttccttgcctgggtgttctccttcaaaaattggaaaaccctgcgttgcgtgaaag 2670989

                  
Query: 445     ctt 447
               |||
Sbjct: 2670990 ctt 2670992



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                           
Query: 23      aatgaagagttctggcgaggtacagaaccacttcaacttggtcgtttgccatgtcttcag 82
               ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 2668375 aatgaggaattctggcgaggaacagagccacttcaactgggtcgcttgccgtgccttcag 2668434

                
Query: 83      g 83
               |
Sbjct: 2668435 g 2668435



to top

>ref|NM_130361.3| Arabidopsis thaliana DEGP2; serine-type peptidase/ trypsin
           AT2G47940 (DEGP2) mRNA, complete cds
          Length = 2214

 Score =  139 bits (70), Expect = 9e-30
 Identities = 217/266 (81%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct: 714 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 773

                                                                       
Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196
           ||||| ||||||||||| || ||||| ||| | || || |||||| |||| ||  | |||
Sbjct: 774 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 833

                                                                       
Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256
           ||  ||||||| || || || |||||  |||| || |||||||| || ||||| || || 
Sbjct: 834 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 893

                                                                       
Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316
           || |||||||| |||||||||||||| ||||| | ||| || || ||| |||||||||||
Sbjct: 894 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 953

                                     
Query: 317 ggatatgttattccaactacagttgt 342
           |||||||| |||||||| || |||||
Sbjct: 954 ggatatgtgattccaacaaccgttgt 979



to top

>gb|AF349516.1| Arabidopsis thaliana putative DegP2 protease (At2g47940) mRNA,
           complete cds
          Length = 1872

 Score =  139 bits (70), Expect = 9e-30
 Identities = 217/266 (81%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct: 646 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 705

                                                                       
Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196
           ||||| ||||||||||| || ||||| ||| | || || |||||| |||| ||  | |||
Sbjct: 706 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 765

                                                                       
Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256
           ||  ||||||| || || || |||||  |||| || |||||||| || ||||| || || 
Sbjct: 766 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 825

                                                                       
Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316
           || |||||||| |||||||||||||| ||||| | ||| || || ||| |||||||||||
Sbjct: 826 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 885

                                     
Query: 317 ggatatgttattccaactacagttgt 342
           |||||||| |||||||| || |||||
Sbjct: 886 ggatatgtgattccaacaaccgttgt 911



to top

>gb|AF326865.1| Arabidopsis thaliana putative DegP2 protease (At2g47940) mRNA,
           complete cds
          Length = 2171

 Score =  139 bits (70), Expect = 9e-30
 Identities = 217/266 (81%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct: 656 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 715

                                                                       
Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196
           ||||| ||||||||||| || ||||| ||| | || || |||||| |||| ||  | |||
Sbjct: 716 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 775

                                                                       
Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256
           ||  ||||||| || || || |||||  |||| || |||||||| || ||||| || || 
Sbjct: 776 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 835

                                                                       
Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316
           || |||||||| |||||||||||||| ||||| | ||| || || ||| |||||||||||
Sbjct: 836 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 895

                                     
Query: 317 ggatatgttattccaactacagttgt 342
           |||||||| |||||||| || |||||
Sbjct: 896 ggatatgtgattccaacaaccgttgt 921



to top

>gb|AY102139.1| Arabidopsis thaliana At2g47940/F17A22.33 mRNA, complete cds
          Length = 1824

 Score =  139 bits (70), Expect = 9e-30
 Identities = 217/266 (81%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct: 646 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 705

                                                                       
Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196
           ||||| ||||||||||| || ||||| ||| | || || |||||| |||| ||  | |||
Sbjct: 706 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 765

                                                                       
Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256
           ||  ||||||| || || || |||||  |||| || |||||||| || ||||| || || 
Sbjct: 766 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 825

                                                                       
Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316
           || |||||||| |||||||||||||| ||||| | ||| || || ||| |||||||||||
Sbjct: 826 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 885

                                     
Query: 317 ggatatgttattccaactacagttgt 342
           |||||||| |||||||| || |||||
Sbjct: 886 ggatatgtgattccaacaaccgttgt 911



to top

>gb|AY075700.1| Arabidopsis thaliana At2g47940/F17A22.33 mRNA, complete cds
          Length = 2155

 Score =  139 bits (70), Expect = 9e-30
 Identities = 217/266 (81%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct: 656 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 715

                                                                       
Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196
           ||||| ||||||||||| || ||||| ||| | || || |||||| |||| ||  | |||
Sbjct: 716 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 775

                                                                       
Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256
           ||  ||||||| || || || |||||  |||| || |||||||| || ||||| || || 
Sbjct: 776 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 835

                                                                       
Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316
           || |||||||| |||||||||||||| ||||| | ||| || || ||| |||||||||||
Sbjct: 836 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 895

                                     
Query: 317 ggatatgttattccaactacagttgt 342
           |||||||| |||||||| || |||||
Sbjct: 896 ggatatgtgattccaacaaccgttgt 921



to top

>gb|AF245171.1|AF245171 Arabidopsis thaliana DegP2 protease (DEGP2) mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 2280

 Score =  139 bits (70), Expect = 9e-30
 Identities = 217/266 (81%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct: 714 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 773

                                                                       
Query: 137 aaaggcgttgtatcacgcattgaggtcacaccatatgcgcatggaacatcagatcttctt 196
           ||||| ||||||||||| || ||||| ||| | || || |||||| |||| ||  | |||
Sbjct: 774 aaaggggttgtatcacgtatagaggtaacatcttacgctcatggatcatccgacttgctt 833

                                                                       
Query: 197 ggggttcaaattgatgcagcaataaacgcaggaaacagtggtggaccggcatttaatgag 256
           ||  ||||||| || || || |||||  |||| || |||||||| || ||||| || || 
Sbjct: 834 ggaattcaaatcgacgctgctataaatccagggaatagtggtggccctgcattcaacgac 893

                                                                       
Query: 257 caaggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatatt 316
           || |||||||| |||||||||||||| ||||| | ||| || || ||| |||||||||||
Sbjct: 894 cagggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatatt 953

                                     
Query: 317 ggatatgttattccaactacagttgt 342
           |||||||| |||||||| || |||||
Sbjct: 954 ggatatgtgattccaacaaccgttgt 979



to top

>emb|BX819857.1|CNS0AA34 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS39ZF07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2210

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                        
Query: 260  ggggaatgcattggagtagcatttcaggtgttcaggtcagatgaagctgaaaatattgga 319
            |||||||| |||||||||||||| ||||| | ||| || || ||| ||||||||||||||
Sbjct: 924  ggggaatgtattggagtagcattccaggtttacagatccgaagaaactgaaaatattgga 983

                                   
Query: 320  tatgttattccaactacagttgt 342
            ||||| |||||||| || |||||
Sbjct: 984  tatgtgattccaacaaccgttgt 1006



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           |||||||||||||| ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct: 734 cttcaggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttaca 793

                                     
Query: 137 aaaggcgttgtatcacgcattgaggt 162
           ||||| ||||||||||| || |||||
Sbjct: 794 aaaggggttgtatcacgtatagaggt 819



to top

>gb|AC006072.4| Arabidopsis thaliana chromosome 2 clone T9J23 map CIC06C03, complete
             sequence
          Length = 81565

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 80    caggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaa 139
             ||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||||||
Sbjct: 23796 caggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttacaaaa 23737

                                    
Query: 140   ggcgttgtatcacgcattgaggt 162
             || ||||||||||| || |||||
Sbjct: 23736 ggggttgtatcacgtatagaggt 23714



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 306   ctgaaaatattggatatgttattccaactacagttgt 342
             ||||||||||||||||||| |||||||| || |||||
Sbjct: 23231 ctgaaaatattggatatgtgattccaacaaccgttgt 23195



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 233   agtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttcaggt 288
             |||||||| || ||||| || || || |||||||| |||||||||||||| |||||
Sbjct: 23388 agtggtggccctgcattcaacgaccagggggaatgtattggagtagcattccaggt 23333



to top

>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
             sequence
          Length = 106355

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 80    caggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgacaaaa 139
             ||||||||||| ||||| || || ||||||||||| ||||| || || ||||| ||||||
Sbjct: 88107 caggattcagttactgtcgtgggatatcctcttggaggagatacaatctctgttacaaaa 88048

                                    
Query: 140   ggcgttgtatcacgcattgaggt 162
             || ||||||||||| || |||||
Sbjct: 88047 ggggttgtatcacgtatagaggt 88025



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 306   ctgaaaatattggatatgttattccaactacagttgt 342
             ||||||||||||||||||| |||||||| || |||||
Sbjct: 87542 ctgaaaatattggatatgtgattccaacaaccgttgt 87506



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 233   agtggtggaccggcatttaatgagcaaggggaatgcattggagtagcatttcaggt 288
             |||||||| || ||||| || || || |||||||| |||||||||||||| |||||
Sbjct: 87699 agtggtggccctgcattcaacgaccagggggaatgtattggagtagcattccaggt 87644



to top

>ref|XM_467732.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1704

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 77  cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
           ||||||||| | || |||||||| || |||||  |||| |||||||| ||||||||||||
Sbjct: 613 cttcaggatgctgtgactgttgttggttatccaattggaggagacacaatatctgtgaca 672

            
Query: 137 a 137
           |
Sbjct: 673 a 673



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                            
Query: 77       cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
                ||||||||| | || |||||||| || |||||  |||| |||||||| ||||||||||||
Sbjct: 31118552 cttcaggatgctgtgactgttgttggttatccaattggaggagacacaatatctgtgaca 31118493

                 
Query: 137      a 137
                |
Sbjct: 31118492 a 31118492



to top

>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0585G03
          Length = 173649

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                          
Query: 77     cttcaggattcagtaactgttgtcgggtatcctcttggtggagacactatatctgtgaca 136
              ||||||||| | || |||||||| || |||||  |||| |||||||| ||||||||||||
Sbjct: 107776 cttcaggatgctgtgactgttgttggttatccaattggaggagacacaatatctgtgaca 107717

               
Query: 137    a 137
              |
Sbjct: 107716 a 107716



to top

>gb|AF539999.1| Mamestra configurata nucleopolyhedrovirus A 90/4, complete genome
          Length = 153656

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 298   agatgaagctgaaaatattgga 319
             ||||||||||||||||||||||
Sbjct: 16660 agatgaagctgaaaatattgga 16639



to top

>gb|U59461.2|MBU59461 Mamestra configurata NPV-A strain 90/2, complete genome
          Length = 155060

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 298   agatgaagctgaaaatattgga 319
             ||||||||||||||||||||||
Sbjct: 16652 agatgaagctgaaaatattgga 16631



to top

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 203    caaattgatgcagcaataaacgcaggaaacagtggtggacc 243
              |||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 734066 caaattgacgccgcaatcaacccaggaaacagtggcggacc 734026



to top

>gb|AC154710.2| Mus musculus BAC clone RP24-357L12 from chromosome 14, complete
             sequence
          Length = 163421

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 409   acttcagaaattggaaaaccc 429
             |||||||||||||||||||||
Sbjct: 59756 acttcagaaattggaaaaccc 59736



to top

>ref|XM_672636.1| Plasmodium berghei strain ANKA heat shock protein (PB000957.03.0)
            partial mRNA
          Length = 2142

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 307  tgaaaatattggatatgttat 327
            |||||||||||||||||||||
Sbjct: 1920 tgaaaatattggatatgttat 1940



to top

>emb|AL356275.20| Human DNA sequence from clone RP11-328D5 on chromosome 1 Contains the 5'
              end of a novel gene, a novel gene, the CD34 gene for CD34
              antigen and the 3' end of the PLXNA2 gene for plexin A2,
              complete sequence
          Length = 198906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 381    acacaggatttccttgcctgg 401
              |||||||||||||||||||||
Sbjct: 148361 acacaggatttccttgcctgg 148381



to top

>emb|AL596164.1| Listeria innocua Clip11262 complete genome, segment 2/12
          Length = 224650

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 209    gatgcagcaataaacgcaggaaacagtggtgga 241
              ||||||||||| ||| |||| ||||||||||||
Sbjct: 104414 gatgcagcaattaacccaggtaacagtggtgga 104446



to top

>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 203    caaattgatgcagcaataaacgcaggaaacagtggtggacc 243
              |||| ||||||  ||||||| ||||| ||||||||||||||
Sbjct: 627498 caaactgatgcttcaataaatgcaggtaacagtggtggacc 627458



to top

>emb|AL035091.2|HS88L2 Human DNA sequence from clone XX-D88L2 on chromosome 1q32.2-32.3,
              complete sequence
          Length = 160771

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 381    acacaggatttccttgcctgg 401
              |||||||||||||||||||||
Sbjct: 145189 acacaggatttccttgcctgg 145169



to top

>gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, complete sequence
          Length = 208309

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   tgaaaatattggatatgtta 326
             ||||||||||||||||||||
Sbjct: 54213 tgaaaatattggatatgtta 54232



to top

>ref|XM_421530.1| PREDICTED: Gallus gallus similar to J domain containing protein 1
           isoform a; J domain containing protein 1; J domain
           protein 1 (LOC423647), mRNA
          Length = 1743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 aaaatggaaaatacacagga 388
           ||||||||||||||||||||
Sbjct: 692 aaaatggaaaatacacagga 711



to top

>gb|AC158542.2| Pan troglodytes BAC clone CH251-262O17 from chromosome y, complete
              sequence
          Length = 174274

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ttccaactacagttgtatcc 346
              ||||||||||||||||||||
Sbjct: 134148 ttccaactacagttgtatcc 134167



to top

>emb|AJ004799.1|HSSYBL1 Homo sapiens SYBL1 gene
          Length = 39287

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 373  tggaaaatacacaggatttc 392
            ||||||||||||||||||||
Sbjct: 1425 tggaaaatacacaggatttc 1406



to top

>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ccatgtcttcaggattcagt 90
              ||||||||||||||||||||
Sbjct: 192989 ccatgtcttcaggattcagt 192970



to top

>gb|AC006484.2| Homo sapiens chromosome 5, clone hRPK.448_K_10, complete sequence
          Length = 156814

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    tttgccatgtcttcaggatt 86
             ||||||||||||||||||||
Sbjct: 51002 tttgccatgtcttcaggatt 51021



to top

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 327      ttccaactacagttgtatcc 346
                ||||||||||||||||||||
Sbjct: 10157522 ttccaactacagttgtatcc 10157541



to top

>ref|NM_009148.2| Mus musculus exocyst complex component 4 (Exoc4), mRNA
          Length = 3723

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  tcaggtcagatgaagctgaa 310
            ||||||||||||||||||||
Sbjct: 3637 tcaggtcagatgaagctgaa 3618



to top

>gb|DP000055.1| Pan troglodytes chromosome Y chry_random_1 genomic scaffold
          Length = 276070

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ttccaactacagttgtatcc 346
             ||||||||||||||||||||
Sbjct: 71564 ttccaactacagttgtatcc 71583



to top

>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold
          Length = 331329

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ttccaactacagttgtatcc 346
              ||||||||||||||||||||
Sbjct: 134892 ttccaactacagttgtatcc 134911



to top

>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete
              sequence
          Length = 225200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ttccaactacagttgtatcc 346
              ||||||||||||||||||||
Sbjct: 150637 ttccaactacagttgtatcc 150656



to top

>gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, complete sequence
          Length = 133085

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  gaaaatattggatatgttat 327
            ||||||||||||||||||||
Sbjct: 5740 gaaaatattggatatgttat 5721



to top

>emb|BX950610.2| Gallus gallus finished cDNA, clone ChEST529k20
          Length = 773

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 aaaatggaaaatacacagga 388
           ||||||||||||||||||||
Sbjct: 636 aaaatggaaaatacacagga 655



to top

>dbj|AK028250.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched
            library, clone:3002004E07 product:SEC8 (S. cerevisiae),
            full insert sequence
          Length = 3440

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  tcaggtcagatgaagctgaa 310
            ||||||||||||||||||||
Sbjct: 3369 tcaggtcagatgaagctgaa 3350



to top

>gb|AC153817.6| Mus musculus  BAC RP23-11P24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 247508

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   tcaggtcagatgaagctgaa 310
             ||||||||||||||||||||
Sbjct: 28164 tcaggtcagatgaagctgaa 28145



to top

>dbj|AK173235.1| Mus musculus mRNA for mKIAA1699 protein
          Length = 3711

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  tcaggtcagatgaagctgaa 310
            ||||||||||||||||||||
Sbjct: 3640 tcaggtcagatgaagctgaa 3621



to top

>gb|AC163766.3| Pan troglodytes BAC clone CH251-115P4 from chromosome y, complete
             sequence
          Length = 185225

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ttccaactacagttgtatcc 346
             ||||||||||||||||||||
Sbjct: 73636 ttccaactacagttgtatcc 73617



to top

>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete
             sequence
          Length = 207364

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ttccaactacagttgtatcc 346
             ||||||||||||||||||||
Sbjct: 10943 ttccaactacagttgtatcc 10962



to top

>gb|AC155915.2| Mus musculus 6 BAC RP24-462N21 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 152279

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   tcaggtcagatgaagctgaa 310
             ||||||||||||||||||||
Sbjct: 23588 tcaggtcagatgaagctgaa 23607



to top

>emb|AJ271735.1|HSA271735 Homo sapiens Xq pseudoautosomal region; segment 1/2
          Length = 240000

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    tggaaaatacacaggatttc 392
              ||||||||||||||||||||
Sbjct: 239314 tggaaaatacacaggatttc 239295



to top

>gb|AC163728.4| Pan troglodytes BAC clone CH251-589C1 from chromosome y, complete
            sequence
          Length = 206451

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  ttccaactacagttgtatcc 346
            ||||||||||||||||||||
Sbjct: 6956 ttccaactacagttgtatcc 6975



to top

>gb|AC163716.3| Pan troglodytes BAC clone CH251-828J24 from chromosome y, complete
              sequence
          Length = 165274

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    ttccaactacagttgtatcc 346
              ||||||||||||||||||||
Sbjct: 159574 ttccaactacagttgtatcc 159555



to top

>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204618

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ccatgtcttcaggattcagt 90
              ||||||||||||||||||||
Sbjct: 161135 ccatgtcttcaggattcagt 161154



to top

>dbj|AB078943.1| Forficula scudderi ORF1 gene, ORF2 pseudogene for gag-like protein,
            reverse transcriptase, partial cds, clone:HalFs1-10
          Length = 3573

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  taatgagcaaggggaatgca 269
            ||||||||||||||||||||
Sbjct: 2410 taatgagcaaggggaatgca 2429



to top

>dbj|AB078942.1| Forficula scudderi ORF1 gene, ORF2 pseudogene for gag-like protein,
            reverse transcriptase, partial cds, clone:HalFs1-7
          Length = 3595

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  taatgagcaaggggaatgca 269
            ||||||||||||||||||||
Sbjct: 2432 taatgagcaaggggaatgca 2451



to top

>dbj|AB078941.1| Forficula scudderi ORF1 gene, ORF2 pseudogene for gag-like protein,
            reverse transcriptase, partial cds, clone:HalFs1-5
          Length = 3573

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  taatgagcaaggggaatgca 269
            ||||||||||||||||||||
Sbjct: 2410 taatgagcaaggggaatgca 2429



to top

>gb|BC034644.1| Mus musculus exocyst complex component 4, mRNA (cDNA clone MGC:36178
            IMAGE:5355276), complete cds
          Length = 3723

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  tcaggtcagatgaagctgaa 310
            ||||||||||||||||||||
Sbjct: 3637 tcaggtcagatgaagctgaa 3618



to top

>gb|AC163727.3| Pan troglodytes BAC clone CH251-1132L6 from chromosome y, complete
             sequence
          Length = 191546

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ttccaactacagttgtatcc 346
             ||||||||||||||||||||
Sbjct: 71559 ttccaactacagttgtatcc 71578



to top

>emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chromosome 2, complete
             sequence
          Length = 193718

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   agctgaaaatattggatatg 323
             ||||||||||||||||||||
Sbjct: 89410 agctgaaaatattggatatg 89391


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,085,098
Number of Sequences: 3902068
Number of extensions: 4085098
Number of successful extensions: 73650
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73461
Number of HSP's gapped (non-prelim): 188
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top