ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags7f15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465130.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1618 Score = 151 bits (76), Expect = 3e-33 Identities = 127/144 (88%) Strand = Plus / Plus Query: 179 gagcagtccggatgggaaagtctctgggaaaggatcgtcgagctagtgatgtggaaggac 238 |||||||| || |||||| ||||||||||||||||||||| | |||||||||||| | Sbjct: 676 gagcagtctgggtgggaagatctctgggaaaggatcgtcgacttggtgatgtggaagaat 735 Query: 239 gtggcgaaatcagcactctggttcgggatgggatccatgttcttcctctcttgctccttt 298 ||||||||||| ||||||||||| ||| ||||||||||||||||| |||| ||||||||| Sbjct: 736 gtggcgaaatcggcactctggtttgggttgggatccatgttcttcttctcctgctccttt 795 Query: 299 tcaagagagatcgctttcagccca 322 ||||| |||||| | ||||||||| Sbjct: 796 tcaagggagatcaccttcagccca 819 Score = 91.7 bits (46), Expect = 2e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 422 ttgactgaaaaagattttcttcgcgctgccggagctgtgttgccgattgctaactccatc 481 ||||||||| | ||| | ||||| ||||| |||| |||||||| |||| |||||||| Sbjct: 925 ttgactgaagatgatgtgcttcgtgctgcacgagccgtgttgccagttgcaaactccatg 984 Query: 482 atatccacggcacaagtgatcttctcgggcaacccatcgacgactctcaaagtgttgccc 541 ||||| || ||||||||||||||||| || | ||||||| |||||||||||| || || Sbjct: 985 atatcaactgcacaagtgatcttctctggtgaaccatcgatgactctcaaagtattacct 1044 Query: 542 gttcttctgttcggtgcaaaatatggtagcctgattac 579 | ||||||||| ||||| ||||| ||||| ||| |||| Sbjct: 1045 gctcttctgtttggtgctaaatacggtagtctggttac 1082
>dbj|AK110752.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-G08, full insert sequence Length = 1618 Score = 151 bits (76), Expect = 3e-33 Identities = 127/144 (88%) Strand = Plus / Plus Query: 179 gagcagtccggatgggaaagtctctgggaaaggatcgtcgagctagtgatgtggaaggac 238 |||||||| || |||||| ||||||||||||||||||||| | |||||||||||| | Sbjct: 676 gagcagtctgggtgggaagatctctgggaaaggatcgtcgacttggtgatgtggaagaat 735 Query: 239 gtggcgaaatcagcactctggttcgggatgggatccatgttcttcctctcttgctccttt 298 ||||||||||| ||||||||||| ||| ||||||||||||||||| |||| ||||||||| Sbjct: 736 gtggcgaaatcggcactctggtttgggttgggatccatgttcttcttctcctgctccttt 795 Query: 299 tcaagagagatcgctttcagccca 322 ||||| |||||| | ||||||||| Sbjct: 796 tcaagggagatcaccttcagccca 819 Score = 91.7 bits (46), Expect = 2e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 422 ttgactgaaaaagattttcttcgcgctgccggagctgtgttgccgattgctaactccatc 481 ||||||||| | ||| | ||||| ||||| |||| |||||||| |||| |||||||| Sbjct: 925 ttgactgaagatgatgtgcttcgtgctgcacgagccgtgttgccagttgcaaactccatg 984 Query: 482 atatccacggcacaagtgatcttctcgggcaacccatcgacgactctcaaagtgttgccc 541 ||||| || ||||||||||||||||| || | ||||||| |||||||||||| || || Sbjct: 985 atatcaactgcacaagtgatcttctctggtgaaccatcgatgactctcaaagtattacct 1044 Query: 542 gttcttctgttcggtgcaaaatatggtagcctgattac 579 | ||||||||| ||||| ||||| ||||| ||| |||| Sbjct: 1045 gctcttctgtttggtgctaaatacggtagtctggttac 1082
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 7e-31 Identities = 117/132 (88%) Strand = Plus / Plus Query: 179 gagcagtccggatgggaaagtctctgggaaaggatcgtcgagctagtgatgtggaaggac 238 |||||||| || |||||| ||||||||||||||||||||| | |||||||||||| | Sbjct: 11758433 gagcagtctgggtgggaagatctctgggaaaggatcgtcgacttggtgatgtggaagaat 11758492 Query: 239 gtggcgaaatcagcactctggttcgggatgggatccatgttcttcctctcttgctccttt 298 ||||||||||| ||||||||||| ||| ||||||||||||||||| |||| ||||||||| Sbjct: 11758493 gtggcgaaatcggcactctggtttgggttgggatccatgttcttcttctcctgctccttt 11758552 Query: 299 tcaagagagatc 310 ||||| |||||| Sbjct: 11758553 tcaagggagatc 11758564 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 422 ttgactgaaaaagattttcttcgcgctgccggagctgtgttgccgattgctaactccatc 481 ||||||||| | ||| | ||||| ||||| |||| |||||||| |||| |||||||| Sbjct: 11758870 ttgactgaagatgatgtgcttcgtgctgcacgagccgtgttgccagttgcaaactccatg 11758929 Query: 482 atatccacggcacaagtgatcttctcgggcaacccatcgacgactctcaaagt 534 ||||| || ||||||||||||||||| || | ||||||| |||||||||||| Sbjct: 11758930 atatcaactgcacaagtgatcttctctggtgaaccatcgatgactctcaaagt 11758982
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 143 bits (72), Expect = 7e-31 Identities = 117/132 (88%) Strand = Plus / Plus Query: 179 gagcagtccggatgggaaagtctctgggaaaggatcgtcgagctagtgatgtggaaggac 238 |||||||| || |||||| ||||||||||||||||||||| | |||||||||||| | Sbjct: 66323 gagcagtctgggtgggaagatctctgggaaaggatcgtcgacttggtgatgtggaagaat 66382 Query: 239 gtggcgaaatcagcactctggttcgggatgggatccatgttcttcctctcttgctccttt 298 ||||||||||| ||||||||||| ||| ||||||||||||||||| |||| ||||||||| Sbjct: 66383 gtggcgaaatcggcactctggtttgggttgggatccatgttcttcttctcctgctccttt 66442 Query: 299 tcaagagagatc 310 ||||| |||||| Sbjct: 66443 tcaagggagatc 66454 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 422 ttgactgaaaaagattttcttcgcgctgccggagctgtgttgccgattgctaactccatc 481 ||||||||| | ||| | ||||| ||||| |||| |||||||| |||| |||||||| Sbjct: 66760 ttgactgaagatgatgtgcttcgtgctgcacgagccgtgttgccagttgcaaactccatg 66819 Query: 482 atatccacggcacaagtgatcttctcgggcaacccatcgacgactctcaaagt 534 ||||| || ||||||||||||||||| || | ||||||| |||||||||||| Sbjct: 66820 atatcaactgcacaagtgatcttctctggtgaaccatcgatgactctcaaagt 66872
>ref|XM_848695.1| PREDICTED: Canis familiaris similar to CG8580-PA, isoform A, transcript variant 3 (LOC485222), mRNA Length = 1333 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 72 aggcggtggtggcggcggccgccgcc 97 |||||| ||||||||||||||||||| Sbjct: 148 aggcggcggtggcggcggccgccgcc 123
>ref|XM_862793.1| PREDICTED: Canis familiaris similar to CG8580-PA, isoform A, transcript variant 4 (LOC485222), mRNA Length = 1889 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 72 aggcggtggtggcggcggccgccgcc 97 |||||| ||||||||||||||||||| Sbjct: 686 aggcggcggtggcggcggccgccgcc 661
>ref|XM_215843.3| PREDICTED: Rattus norvegicus similar to mKIAA0256 protein (LOC296115), mRNA Length = 3651 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 70 caaggcggtggtggcggcggccgccgcccc 99 ||||||||||| ||||||||| |||||||| Sbjct: 94 caaggcggtggaggcggcggcggccgcccc 65
>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ccatgttcttcctctcttgct 293 ||||||||||||||||||||| Sbjct: 124689 ccatgttcttcctctcttgct 124669
>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence Length = 244130 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ccatgttcttcctctcttgct 293 ||||||||||||||||||||| Sbjct: 216551 ccatgttcttcctctcttgct 216531
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgcc 97 |||||||| |||||||||||||||| Sbjct: 130143 ggcggtggcggcggcggccgccgcc 130119
>ref|NM_153134.2| Mus musculus immunity-related GTPase family, Q (Irgq), mRNA Length = 6101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 tggcggcggccgccgccccag 101 ||||||||||||||||||||| Sbjct: 1567 tggcggcggccgccgccccag 1587
>gb|AC112158.4| Mus musculus BAC clone RP24-116K14 from chromosome 15, complete sequence Length = 175171 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgttcttcctctcttgctcct 296 ||||||||||||||||||||| Sbjct: 104876 tgttcttcctctcttgctcct 104896
>emb|AJ404654.1|CTE404654 Chironomus tentans hrp65 gene for hrp65-2, 1 & 3 isoforms Length = 7306 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 caaggcggtggtggcggcggc 90 ||||||||||||||||||||| Sbjct: 2073 caaggcggtggtggcggcggc 2093
>emb|AJ243013.1|CTE243013 Chironomus tentans mRNA for Hrp65 protein Length = 2213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 caaggcggtggtggcggcggc 90 ||||||||||||||||||||| Sbjct: 1391 caaggcggtggtggcggcggc 1411
>gb|AC104142.6| Drosophila melanogaster X BAC RP98-13K19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186753 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 catgttcttcctctcttgctc 294 ||||||||||||||||||||| Sbjct: 11936 catgttcttcctctcttgctc 11956
>gb|AY094680.1| Drosophila melanogaster GH06335 full insert cDNA Length = 3984 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 catgttcttcctctcttgctc 294 ||||||||||||||||||||| Sbjct: 3163 catgttcttcctctcttgctc 3143
>ref|NM_130635.2| Drosophila melanogaster CG3078-RA (CG3078), mRNA Length = 3983 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 catgttcttcctctcttgctc 294 ||||||||||||||||||||| Sbjct: 3177 catgttcttcctctcttgctc 3157
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193714 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 catgttcttcctctcttgctc 294 ||||||||||||||||||||| Sbjct: 88102 catgttcttcctctcttgctc 88122
>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin biosynthetic gene cluster, complete sequence Length = 95700 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 tggtggcggcggccgccgccc 98 ||||||||||||||||||||| Sbjct: 57959 tggtggcggcggccgccgccc 57939
>gb|AF322649.1|AF322649 Mus musculus FKSG27 (FKSG27) mRNA, complete cds Length = 2151 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 tggcggcggccgccgccccag 101 ||||||||||||||||||||| Sbjct: 1397 tggcggcggccgccgccccag 1417
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgc 93 ||||||||||||||||||||| Sbjct: 509424 ggcggtggtggcggcggccgc 509444
>dbj|AK051117.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030074E15 product:FKSG27 homolog [Mus musculus], full insert sequence Length = 2279 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 tggcggcggccgccgccccag 101 ||||||||||||||||||||| Sbjct: 1519 tggcggcggccgccgccccag 1539
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 caaggcggtggtggcggcggc 90 ||||||||||||||||||||| Sbjct: 15490772 caaggcggtggtggcggcggc 15490752 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 ggctgtggacaaggcggtggtggcggcgg 89 |||| ||||||||| |||||||||||||| Sbjct: 7873685 ggctatggacaaggtggtggtggcggcgg 7873657 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggtggtggcggcggccgccg 95 |||||||||||||||||||| Sbjct: 25814995 ggtggtggcggcggccgccg 25815014
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgcc 97 |||||||| |||||||||||||||| Sbjct: 19802876 ggcggtggcggcggcggccgccgcc 19802852
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgcc 97 |||||||| |||||||||||||||| Sbjct: 27316 ggcggtggcggcggcggccgccgcc 27292
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgcc 97 |||||||| |||||||||||||||| Sbjct: 148562 ggcggtggcggcggcggccgccgcc 148538
>dbj|AK109396.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G04, full insert sequence Length = 964 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 ggctgtggacaaggcggtggtggcggcgg 89 |||| ||||||||| |||||||||||||| Sbjct: 581 ggctatggacaaggtggtggtggcggcgg 609
>dbj|AK102795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108B13, full insert sequence Length = 1805 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgcc 97 |||||||| |||||||||||||||| Sbjct: 493 ggcggtggcggcggcggccgccgcc 517
>gb|AC155307.2| Mus musculus BAC clone RP24-147F17 from 15, complete sequence Length = 190527 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tgttcttcctctcttgctcct 296 ||||||||||||||||||||| Sbjct: 124868 tgttcttcctctcttgctcct 124848
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 catgttcttcctctcttgctc 294 ||||||||||||||||||||| Sbjct: 188843 catgttcttcctctcttgctc 188863
>gb|AC102478.16| Mus musculus chromosome 5, clone RP24-407H12, complete sequence Length = 153971 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 tagccttctttaaggattctgtacc 387 |||||||||| |||||||||||||| Sbjct: 95520 tagccttcttcaaggattctgtacc 95544
>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence Length = 174902 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ccatgttcttcctctcttgct 293 ||||||||||||||||||||| Sbjct: 173924 ccatgttcttcctctcttgct 173944
>dbj|AP001002.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-678K21, complete sequences Length = 164380 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 agcccattttctgtattttgt 337 ||||||||||||||||||||| Sbjct: 150462 agcccattttctgtattttgt 150482
>gb|BC080294.1| Mus musculus immunity-related GTPase family, Q, mRNA (cDNA clone MGC:90588 IMAGE:6856174), complete cds Length = 6097 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 tggcggcggccgccgccccag 101 ||||||||||||||||||||| Sbjct: 1546 tggcggcggccgccgccccag 1566
>gb|BC056347.1| Mus musculus immunity-related GTPase family, Q, mRNA (cDNA clone MGC:73929 IMAGE:5705226), complete cds Length = 6101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 tggcggcggccgccgccccag 101 ||||||||||||||||||||| Sbjct: 1567 tggcggcggccgccgccccag 1587
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 caaggcggtggtggcggcggc 90 ||||||||||||||||||||| Sbjct: 15445055 caaggcggtggtggcggcggc 15445035 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 ggctgtggacaaggcggtggtggcggcgg 89 |||| ||||||||| |||||||||||||| Sbjct: 7873566 ggctatggacaaggtggtggtggcggcgg 7873538 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggtggtggcggcggccgccg 95 |||||||||||||||||||| Sbjct: 25743171 ggtggtggcggcggccgccg 25743190
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 ggctgtggacaaggcggtggtggcggcgg 89 |||| ||||||||| |||||||||||||| Sbjct: 126485 ggctatggacaaggtggtggtggcggcgg 126513
>emb|AL713911.3|CNS07YQC Oryza sativa chromosome 12, . BAC OSJNBb0066P16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126680 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 caaggcggtggtggcggcggc 90 ||||||||||||||||||||| Sbjct: 11715 caaggcggtggtggcggcggc 11735
>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence Length = 250028 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 tggcggcggccgccgccccag 101 ||||||||||||||||||||| Sbjct: 137474 tggcggcggccgccgccccag 137454
>gb|AY827559.1| Trypanosoma congolense procyclin Kil1 mRNA, complete cds Length = 830 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 ccgttcttctgttcggtgca 559 |||||||||||||||||||| Sbjct: 81 ccgttcttctgttcggtgca 100
>gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, complete sequence Length = 239600 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cctctcttgctccttttcaa 302 |||||||||||||||||||| Sbjct: 144272 cctctcttgctccttttcaa 144291
>ref|XM_521028.1| PREDICTED: Pan troglodytes similar to solute carrier family 9, member 7; nonselective sodium potassium/proton exchanger; sodium/hydrogen exchanger 7 (LOC465595), mRNA Length = 2989 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cggccgccgccccagagaaggagg 110 ||||||||||||||||| |||||| Sbjct: 297 cggccgccgccccagaggaggagg 274
>ref|XM_520969.1| PREDICTED: Pan troglodytes ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3), mRNA Length = 2676 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 129 ggcggtggtggcggcggccg 148
>ref|XM_509640.1| PREDICTED: Pan troglodytes similar to Forkhead box protein O1A (Forkhead in rhabdomyosarcoma) (LOC452551), mRNA Length = 1365 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 909 ggcggtggcggcggcggccgccgc 932
>ref|XM_469928.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 25 ggcggtggtggcggcggccg 44
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||||||||| ||||||||| Sbjct: 5746 ggcggtggtggcggtggccgccgc 5723
>gb|AC137618.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0090H02, complete sequence Length = 135231 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgc 96 ||||| |||||||||||||||||| Sbjct: 66097 ggcggcggtggcggcggccgccgc 66074
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcggtggtggcggcggccgc 93 |||||||||||||||||||| Sbjct: 28099 gcggtggtggcggcggccgc 28118
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||||||||| ||||||||| Sbjct: 81727 ggcggtggtggcggtggccgccgc 81704
>ref|XM_364908.1| Magnaporthe grisea 70-15 predicted protein (MG09753.4) partial mRNA Length = 501 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaggcggtggtggcggcggc 90 |||||||||||||||||||| Sbjct: 206 aaggcggtggtggcggcggc 225
>ref|XM_415003.1| PREDICTED: Gallus gallus similar to mitochondrial ribosomal protein S5; mitochondrial 28S ribosomal protein S5 (LOC416706), mRNA Length = 3134 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 1065 ggcggtggtggcggcggccg 1084 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 933 ggcggtggtggcggcggccg 952
>gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, complete sequence Length = 203865 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 198971 ccatgctcttcctctcttgctcct 198994 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 196506 ccatgctcttcctctcttgctcct 196529
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acaaggcggtggtggcggcg 88 |||||||||||||||||||| Sbjct: 78346 acaaggcggtggtggcggcg 78327
>ref|XM_878464.1| PREDICTED: Bos taurus insulin-like growth factor-binding protein 5, transcript variant 2 (IGFBP5), mRNA Length = 1386 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 tgttcttcctctcttgctcc 295 |||||||||||||||||||| Sbjct: 1372 tgttcttcctctcttgctcc 1353
>ref|XM_600908.2| PREDICTED: Bos taurus insulin-like growth factor-binding protein 5, transcript variant 1 (IGFBP5), mRNA Length = 1376 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 tgttcttcctctcttgctcc 295 |||||||||||||||||||| Sbjct: 1360 tgttcttcctctcttgctcc 1341
>gb|AC149132.1| Pan troglodytes chromosome X clone PTB-099J01 map human ortholog p22.12 complete sequence Length = 215862 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 198444 ggcggtggtggcggcggccg 198425
>gb|AC121366.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111K12, complete sequence Length = 127901 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgc 96 ||||| |||||||||||||||||| Sbjct: 112644 ggcggcggtggcggcggccgccgc 112621
>gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete sequence Length = 178233 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcggtggtggcggcggccgc 93 |||||||||||||||||||| Sbjct: 177884 gcggtggtggcggcggccgc 177903
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 32538780 ggcggtggtggcggcggccg 32538799
>ref|XM_384674.1| Gibberella zeae PH-1 chromosome 2 predicted protein (FG04498.1) partial mRNA Length = 474 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaggcggtggtggcggcggc 90 |||||||||||||||||||| Sbjct: 428 aaggcggtggtggcggcggc 409
>ref|XM_569190.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB03550) partial mRNA Length = 1973 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cagagaaggaggataacacg 118 |||||||||||||||||||| Sbjct: 1368 cagagaaggaggataacacg 1349
>gb|AC130715.3| Mus musculus BAC clone RP23-460L16 from chromosome 2, complete sequence Length = 168935 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 73588 ccatgctcttcctctcttgctcct 73611
>gb|AC125353.2| Mus musculus BAC clone RP23-455B17 from 6, complete sequence Length = 171963 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 128607 ccatgctcttcctctcttgctcct 128584 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 126142 ccatgctcttcctctcttgctcct 126119
>emb|AL807772.12| Human DNA sequence from clone RP11-188G3 on chromosome X Contains the 5' end of the RPS6KA3 gene for ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2, MRX19, ISPK-1, MAPKAPK1B) and a CpG island, complete sequence Length = 129996 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 108095 ggcggtggtggcggcggccg 108076
>ref|NM_002015.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma) (FOXO1A), mRNA Length = 5723 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 661 ggcggtggcggcggcggccgccgc 684
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a ring finger protein 12 (RNF12) pseudogene, the 5' end of the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma), the 3' end of the MRPS31 gene for mitochondrial ribosomal protein S31 and a CpG island, complete sequence Length = 151261 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 60614 ggcggtggcggcggcggccgccgc 60591
>emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11 on chromosome 6p22.3-23, complete sequence Length = 167514 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ttcttcctctcttgctcctt 297 |||||||||||||||||||| Sbjct: 91247 ttcttcctctcttgctcctt 91228
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 151576 ggcggtggtggcggcggccg 151595 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 130166 ggcggtggtggcggcggccg 130147
>emb|X81459.1|CFGCRYSS2 C.fuscus mRNA for g-crystallin S2 Length = 524 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcggatgccactcatgccac 162 |||||||||||||||||||| Sbjct: 365 gcggatgccactcatgccac 384
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acaaggcggtggtggcggcg 88 |||||||||||||||||||| Sbjct: 1592463 acaaggcggtggtggcggcg 1592444
>emb|CR926032.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0820 (from clone DKFZp459A0820) Length = 2568 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tcttgctccttttcaagagagatc 310 ||||||||| |||||||||||||| Sbjct: 521 tcttgctccgtttcaagagagatc 544
>emb|BX294151.1| Pirellula sp. strain 1 complete genome; segment 19/24 Length = 295650 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ttctcgggcaacccatcgac 522 |||||||||||||||||||| Sbjct: 52455 ttctcgggcaacccatcgac 52474
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ggaggtcctccagggtgacg 40 |||||||||||||||||||| Sbjct: 81164 ggaggtcctccagggtgacg 81183
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 41064 ggcggtggtggcggcggccg 41045
>gb|AC079326.8| Homo sapiens chromosome 11, clone RP11-233I10, complete sequence Length = 180353 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 atgttcttcctctcttgctc 294 |||||||||||||||||||| Sbjct: 83955 atgttcttcctctcttgctc 83936
>gb|BT007455.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma) mRNA, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 276 ggcggtggcggcggcggccgccgc 299
>emb|AL683843.9| Mouse DNA sequence from clone RP23-217E1 on chromosome 11 Contains part of the Ranbp17 gene for RAN binding protein 17, an acidic (leucine-rich) nuclear phosphoprotein 32 family, member E (Anp32e) pseudogene and a high mobility group box 1 (Hmgb1) pseudogene, complete sequence Length = 198926 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 atgccactcatgccacagaaactg 170 ||||||| |||||||||||||||| Sbjct: 101560 atgccacacatgccacagaaactg 101583
>emb|AJ719376.1| Gallus gallus mRNA for hypothetical protein, clone 1l22 Length = 4655 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ggatgggaaagtctctggga 207 |||||||||||||||||||| Sbjct: 442 ggatgggaaagtctctggga 461
>gb|BC070065.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone IMAGE:30345006), partial cds Length = 2482 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 652 ggcggtggcggcggcggccgccgc 675
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cagagaaggaggataacacg 118 |||||||||||||||||||| Sbjct: 1058143 cagagaaggaggataacacg 1058162
>gb|BC021981.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone MGC:1750 IMAGE:2959021), complete cds Length = 2413 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 589 ggcggtggcggcggcggccgccgc 612
>ref|NM_001007946.1| Gallus gallus sphingosine-1-phosphate lyase 1 (SGPL1), mRNA Length = 4655 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ggatgggaaagtctctggga 207 |||||||||||||||||||| Sbjct: 442 ggatgggaaagtctctggga 461
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 tggacaaggcggtggtggcggcgg 89 ||||||||||||||| |||||||| Sbjct: 357910 tggacaaggcggtggaggcggcgg 357933
>gb|AC092502.2| Homo sapiens chromosome 3 clone RP11-204J18, complete sequence Length = 156583 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 143603 ggcggtggtggcggcggccg 143584
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cggtggtggcggcggccgccgccc 98 |||||||||||| ||||||||||| Sbjct: 4714092 cggtggtggcggtggccgccgccc 4714115 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcggtggtggcggcggccgc 93 |||||||||||||||||||| Sbjct: 1359986 gcggtggtggcggcggccgc 1360005
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 11032409 ggcggtggtggcggcggccg 11032390
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 12703347 ggcggtggtggcggcggccg 12703328
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acaaggcggtggtggcggcg 88 |||||||||||||||||||| Sbjct: 27482216 acaaggcggtggtggcggcg 27482197 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgc 96 ||||| |||||||||||||||||| Sbjct: 17438747 ggcggcggtggcggcggccgccgc 17438724 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||||||||| ||||||||| Sbjct: 8673304 ggcggtggtggcggtggccgccgc 8673281
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 32629290 ggcggtggtggcggcggccg 32629309
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaggcggtggtggcggcggc 90 |||||||||||||||||||| Sbjct: 15659490 aaggcggtggtggcggcggc 15659471
>gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosome 13, complete sequence Length = 181229 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gttcttcctctcttgctcct 296 |||||||||||||||||||| Sbjct: 18989 gttcttcctctcttgctcct 18970
>gb|AC023509.42| Homo sapiens 12 BAC RP11-793H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172558 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cagcccattttctgtatttt 335 |||||||||||||||||||| Sbjct: 63369 cagcccattttctgtatttt 63388
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 72229 ggcggtggtggcggcggccg 72248
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaggcggtggtggcggcgg 89 |||||||||||||||||||| Sbjct: 49487 caaggcggtggtggcggcgg 49506
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aggcggtggtggcggcggcc 91 |||||||||||||||||||| Sbjct: 3876475 aggcggtggtggcggcggcc 3876456
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||||||||||||| ||||| Sbjct: 6120958 ggcggtggtggcggcggcggccgc 6120981
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaggcggtggtggcggcggc 90 |||||||||||||||||||| Sbjct: 97387 aaggcggtggtggcggcggc 97368
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 56868 ggcggtggtggcggcggccg 56849
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0019A05 Length = 144255 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 4124 ggcggtggtggcggcggccg 4105
>gb|AY890174.1| Synthetic construct Homo sapiens clone FLH015809.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 276 ggcggtggcggcggcggccgccgc 299
>gb|AY890173.1| Synthetic construct Homo sapiens clone FLH015808.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 276 ggcggtggcggcggcggccgccgc 299
>gb|AE005056.1| Halobacterium sp. NRC-1 section 87 of 170 of the complete genome Length = 14720 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 ||||||||||||||| |||||||| Sbjct: 12920 ggcggtggtggcggccgccgccgc 12943
>gb|AE004981.1| Halobacterium sp. NRC-1 section 12 of 170 of the complete genome Length = 9971 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 gcggtggtggcggcggccgccgcc 97 |||||||||||||| ||||||||| Sbjct: 5734 gcggtggtggcggccgccgccgcc 5711
>emb|AL672029.7| Mouse DNA sequence from clone RP23-416F22 on chromosome X, complete sequence Length = 189958 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 18628 ccatgctcttcctctcttgctcct 18605
>dbj|AK120240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D20, full insert sequence Length = 3224 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gcggtggtggcggcggccgc 93 |||||||||||||||||||| Sbjct: 241 gcggtggtggcggcggccgc 222
>emb|Z66087.1|HS75B6F H.sapiens CpG island DNA genomic Mse1 fragment, clone 75b6, forward read cpg75b6.ft1a Length = 239 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccg 92 |||||||||||||||||||| Sbjct: 13 ggcggtggtggcggcggccg 32
>dbj|AK064349.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A03, full insert sequence Length = 1837 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||||||||| ||||||||| Sbjct: 473 ggcggtggtggcggtggccgccgc 496
>emb|AL935282.14| Zebrafish DNA sequence from clone CH211-281O21 in linkage group 2, complete sequence Length = 173134 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 tgcaaaatatggtagcctga 575 |||||||||||||||||||| Sbjct: 92034 tgcaaaatatggtagcctga 92053
>gb|BC090016.1| Rattus norvegicus hypothetical LOC303743, mRNA (cDNA clone MGC:109547 IMAGE:7325212), complete cds Length = 1878 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcttggctttgcttccggct 139 |||||||||||||||||||| Sbjct: 1660 gcttggctttgcttccggct 1641
>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete sequence Length = 212028 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 171983 ccatgctcttcctctcttgctcct 172006
>gb|AF032885.1|AF032885 Homo sapiens forkhead protein (FKHR) mRNA, complete cds Length = 5723 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 661 ggcggtggcggcggcggccgccgc 684
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcggtggtggcggcggccgc 93 |||||||||||||||||||| Sbjct: 18922905 gcggtggtggcggcggccgc 18922924
>ref|NM_001013975.1| Rattus norvegicus hypothetical LOC303743 (RGD1307119), mRNA Length = 1878 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcttggctttgcttccggct 139 |||||||||||||||||||| Sbjct: 1660 gcttggctttgcttccggct 1641
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggtggtggcggcggccgccg 95 |||||||||||||||||||| Sbjct: 36446 ggtggtggcggcggccgccg 36465
>gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, complete sequence Length = 193186 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccatgttcttcctctcttg 291 |||||||||||||||||||| Sbjct: 69462 tccatgttcttcctctcttg 69481
>gb|AC131117.4| Mus musculus BAC clone RP24-351I18 from 13, complete sequence Length = 193056 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gttcttcctctcttgctcct 296 |||||||||||||||||||| Sbjct: 29026 gttcttcctctcttgctcct 29045
>emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chromosome X, complete sequence Length = 174151 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 ccatgttcttcctctcttgctcct 296 ||||| |||||||||||||||||| Sbjct: 2776 ccatgctcttcctctcttgctcct 2799
>gb|U02310.1|HSU02310 Human fork head domain protein (FKHR) mRNA, complete cds Length = 3421 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ggcggtggtggcggcggccgccgc 96 |||||||| ||||||||||||||| Sbjct: 282 ggcggtggcggcggcggccgccgc 305 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,346,998 Number of Sequences: 3902068 Number of extensions: 5346998 Number of successful extensions: 130801 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128818 Number of HSP's gapped (non-prelim): 1980 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
