| Clone Name | bags7f13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2511 Score = 434 bits (219), Expect = e-118 Identities = 395/457 (86%) Strand = Plus / Plus Query: 17 agtgaacgactgcgggaatctaaatatgacatcgatgaggaaggactgcgtccttacttt 76 ||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||||| Sbjct: 1262 agtgaacgactccgggaatctaaatatgatatcaacgaggaagatttgcgtccttacttt 1321 Query: 77 gcactgcccaaggttatggatggcctcttcagtcttgcaaataagctcttnggaataacc 136 ||||| ||||||||||||||||||||||||||||| ||||||| |||||| || | | | Sbjct: 1322 gcactacccaaggttatggatggcctcttcagtctcgcaaataggctctttggtgttagc 1381 Query: 137 gttgaagctgcanatgggttggctcctgtttggaacagngacgttaaattttattgtgtc 196 || || ||||| |||| |||||||||||||||| || || || |||||||| |||||| Sbjct: 1382 gtagagcctgcagatggactggctcctgtttggaatagtgatgtcaaattttactgtgtc 1441 Query: 197 aaagattcttccnntagccctgttgcttatttttacttcgacccatactcaagaccatct 256 ||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 1442 aaagattcttcgaatagccctgttgcttatttctacttcgatccatattcaagaccatct 1501 Query: 257 gaaaaacgtggnggggcttggatgaatgtcgncttttctcgtancagngtgctagctcgc 316 || || ||||| ||||||||||||||||| | |||||||| | | ||||| |||||| Sbjct: 1502 gagaagcgtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgc 1561 Query: 317 catggggcttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagtt 376 |||| | |||| ||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 1562 aatggttcacctgtcaggcttcctgttgcccatatggtgtgtaatcagaccccaccagtt 1621 Query: 377 ggcgataagcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggt 436 || ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1622 ggtgataaacccagtcttatgaccttccgtgaggttgaaactgtgttccatgaatttggt 1681 Query: 437 cacgcgctgcagcatatgcttaccagacaagatgaag 473 || ||||||||||| |||||||||| ||||||||||| Sbjct: 1682 catgcgctgcagcacatgcttaccaaacaagatgaag 1718
>dbj|AK103668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135L17, full insert sequence Length = 1787 Score = 434 bits (219), Expect = e-118 Identities = 395/457 (86%) Strand = Plus / Plus Query: 17 agtgaacgactgcgggaatctaaatatgacatcgatgaggaaggactgcgtccttacttt 76 ||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||||| Sbjct: 538 agtgaacgactccgggaatctaaatatgatatcaacgaggaagatttgcgtccttacttt 597 Query: 77 gcactgcccaaggttatggatggcctcttcagtcttgcaaataagctcttnggaataacc 136 ||||| ||||||||||||||||||||||||||||| ||||||| |||||| || | | | Sbjct: 598 gcactacccaaggttatggatggcctcttcagtctcgcaaataggctctttggtgttagc 657 Query: 137 gttgaagctgcanatgggttggctcctgtttggaacagngacgttaaattttattgtgtc 196 || || ||||| |||| |||||||||||||||| || || || |||||||| |||||| Sbjct: 658 gtagagcctgcagatggactggctcctgtttggaatagtgatgtcaaattttactgtgtc 717 Query: 197 aaagattcttccnntagccctgttgcttatttttacttcgacccatactcaagaccatct 256 ||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 718 aaagattcttcgaatagccctgttgcttatttctacttcgatccatattcaagaccatct 777 Query: 257 gaaaaacgtggnggggcttggatgaatgtcgncttttctcgtancagngtgctagctcgc 316 || || ||||| ||||||||||||||||| | |||||||| | | ||||| |||||| Sbjct: 778 gagaagcgtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgc 837 Query: 317 catggggcttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagtt 376 |||| | |||| ||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 838 aatggttcacctgtcaggcttcctgttgcccatatggtgtgtaatcagacaccaccagtt 897 Query: 377 ggcgataagcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggt 436 || ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 898 ggtgataaacccagtcttatgaccttccgtgaggttgaaactgtgttccatgaatttggt 957 Query: 437 cacgcgctgcagcatatgcttaccagacaagatgaag 473 || ||||||||||| |||||||||| ||||||||||| Sbjct: 958 catgcgctgcagcacatgcttaccaaacaagatgaag 994
>dbj|AK101576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050K07, full insert sequence Length = 1690 Score = 434 bits (219), Expect = e-118 Identities = 395/457 (86%) Strand = Plus / Plus Query: 17 agtgaacgactgcgggaatctaaatatgacatcgatgaggaaggactgcgtccttacttt 76 ||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||||| Sbjct: 441 agtgaacgactccgggaatctaaatatgatatcaacgaggaagatttgcgtccttacttt 500 Query: 77 gcactgcccaaggttatggatggcctcttcagtcttgcaaataagctcttnggaataacc 136 ||||| ||||||||||||||||||||||||||||| ||||||| |||||| || | | | Sbjct: 501 gcactacccaaggttatggatggcctcttcagtctcgcaaataggctctttggtgttagc 560 Query: 137 gttgaagctgcanatgggttggctcctgtttggaacagngacgttaaattttattgtgtc 196 || || ||||| |||| |||||||||||||||| || || || |||||||| |||||| Sbjct: 561 gtagagcctgcagatggactggctcctgtttggaatagtgatgtcaaattttactgtgtc 620 Query: 197 aaagattcttccnntagccctgttgcttatttttacttcgacccatactcaagaccatct 256 ||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 621 aaagattcttcgaatagccctgttgcttatttctacttcgatccatattcaagaccatct 680 Query: 257 gaaaaacgtggnggggcttggatgaatgtcgncttttctcgtancagngtgctagctcgc 316 || || ||||| ||||||||||||||||| | |||||||| | | ||||| |||||| Sbjct: 681 gagaagcgtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgc 740 Query: 317 catggggcttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagtt 376 |||| | |||| ||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 741 aatggttcacctgtcaggcttcctgttgcccatatggtgtgtaatcagaccccaccagtt 800 Query: 377 ggcgataagcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggt 436 || ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 801 ggtgataaacccagtcttatgaccttccgtgaggttgaaactgtgttccatgaatttggt 860 Query: 437 cacgcgctgcagcatatgcttaccagacaagatgaag 473 || ||||||||||| |||||||||| ||||||||||| Sbjct: 861 catgcgctgcagcacatgcttaccaaacaagatgaag 897
>dbj|AK070094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040J23, full insert sequence Length = 2478 Score = 434 bits (219), Expect = e-118 Identities = 395/457 (86%) Strand = Plus / Plus Query: 17 agtgaacgactgcgggaatctaaatatgacatcgatgaggaaggactgcgtccttacttt 76 ||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||||| Sbjct: 1229 agtgaacgactccgggaatctaaatatgatatcaacgaggaagatttgcgtccttacttt 1288 Query: 77 gcactgcccaaggttatggatggcctcttcagtcttgcaaataagctcttnggaataacc 136 ||||| ||||||||||||||||||||||||||||| ||||||| |||||| || | | | Sbjct: 1289 gcactacccaaggttatggatggcctcttcagtctcgcaaataggctctttggtgttagc 1348 Query: 137 gttgaagctgcanatgggttggctcctgtttggaacagngacgttaaattttattgtgtc 196 || || ||||| |||| |||||||||||||||| || || || |||||||| |||||| Sbjct: 1349 gtagagcctgcagatggactggctcctgtttggaatagtgatgtcaaattttactgtgtc 1408 Query: 197 aaagattcttccnntagccctgttgcttatttttacttcgacccatactcaagaccatct 256 ||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 1409 aaagattcttcgaatagccctgttgcttatttctacttcgatccatattcaagaccatct 1468 Query: 257 gaaaaacgtggnggggcttggatgaatgtcgncttttctcgtancagngtgctagctcgc 316 || || ||||| ||||||||||||||||| | |||||||| | | ||||| |||||| Sbjct: 1469 gagaagcgtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgc 1528 Query: 317 catggggcttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagtt 376 |||| | |||| ||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 1529 aatggttcacctgtcaggcttcctgttgcccatatggtgtgtaatcagaccccaccagtt 1588 Query: 377 ggcgataagcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggt 436 || ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1589 ggtgataaacccagtcttatgaccttccgtgaggttgaaactgtgttccatgaatttggt 1648 Query: 437 cacgcgctgcagcatatgcttaccagacaagatgaag 473 || ||||||||||| |||||||||| ||||||||||| Sbjct: 1649 catgcgctgcagcacatgcttaccaaacaagatgaag 1685
>dbj|AK065077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K16, full insert sequence Length = 2511 Score = 434 bits (219), Expect = e-118 Identities = 395/457 (86%) Strand = Plus / Plus Query: 17 agtgaacgactgcgggaatctaaatatgacatcgatgaggaaggactgcgtccttacttt 76 ||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||||| Sbjct: 1262 agtgaacgactccgggaatctaaatatgatatcaacgaggaagatttgcgtccttacttt 1321 Query: 77 gcactgcccaaggttatggatggcctcttcagtcttgcaaataagctcttnggaataacc 136 ||||| ||||||||||||||||||||||||||||| ||||||| |||||| || | | | Sbjct: 1322 gcactacccaaggttatggatggcctcttcagtctcgcaaataggctctttggtgttagc 1381 Query: 137 gttgaagctgcanatgggttggctcctgtttggaacagngacgttaaattttattgtgtc 196 || || ||||| |||| |||||||||||||||| || || || |||||||| |||||| Sbjct: 1382 gtagagcctgcagatggactggctcctgtttggaatagtgatgtcaaattttactgtgtc 1441 Query: 197 aaagattcttccnntagccctgttgcttatttttacttcgacccatactcaagaccatct 256 ||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 1442 aaagattcttcgaatagccctgttgcttatttctacttcgatccatattcaagaccatct 1501 Query: 257 gaaaaacgtggnggggcttggatgaatgtcgncttttctcgtancagngtgctagctcgc 316 || || ||||| ||||||||||||||||| | |||||||| | | ||||| |||||| Sbjct: 1502 gagaagcgtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgc 1561 Query: 317 catggggcttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagtt 376 |||| | |||| ||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 1562 aatggttcacctgtcaggcttcctgttgcccatatggtgtgtaatcagaccccaccagtt 1621 Query: 377 ggcgataagcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggt 436 || ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1622 ggtgataaacccagtcttatgaccttccgtgaggttgaaactgtgttccatgaatttggt 1681 Query: 437 cacgcgctgcagcatatgcttaccagacaagatgaag 473 || ||||||||||| |||||||||| ||||||||||| Sbjct: 1682 catgcgctgcagcacatgcttaccaaacaagatgaag 1718
>gb|AY105249.1| Zea mays PCO118287 mRNA sequence Length = 1328 Score = 387 bits (195), Expect = e-104 Identities = 389/457 (85%) Strand = Plus / Plus Query: 17 agtgaacgactgcgggaatctaaatatgacatcgatgaggaaggactgcgtccttacttt 76 |||||||||||| | || ||||||||||| ||| ||||||||| ||||| ||||| ||| Sbjct: 66 agtgaacgactgagagagtctaaatatgatatcaatgaggaagagctgcgcccttatttt 125 Query: 77 gcactgcccaaggttatggatggcctcttcagtcttgcaaataagctcttnggaataacc 136 ||||| ||||||||||||||||||||||||| ||| ||| ||||||| || ||| | || Sbjct: 126 gcactacccaaggttatggatggcctcttcactctggcacataagctttttggagttact 185 Query: 137 gttgaagctgcanatgggttggctcctgtttggaacagngacgttaaattttattgtgtc 196 |||||| ||||| ||||| ||||||| | ||| |||| || || ||||||||||||||| Sbjct: 186 gttgaacctgcagatgggctggctccgatctggcacagtgatgtcaaattttattgtgtc 245 Query: 197 aaagattcttccnntagccctgttgcttatttttacttcgacccatactcaagaccatct 256 ||||| |||||| ||||||||||||||| ||||||||||| || || |||||||||||| Sbjct: 246 aaagactcttccagtagccctgttgcttacttttacttcgatccttattcaagaccatct 305 Query: 257 gaaaaacgtggnggggcttggatgaatgtcgncttttctcgtancagngtgctagctcgc 316 ||||| ||||| ||||||||||||||||| | ||||||||| | | |||||||||||| Sbjct: 306 gaaaagcgtggaggggcttggatgaatgtagtcttttctcgaagtcgcgtgctagctcgc 365 Query: 317 catggggcttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagtt 376 |||| ||| |||||||||||||||||||| || || ||||||| ||||||||| Sbjct: 366 aatggtttggctgctaggctgcctgttgcccatatagtgtgcaatcagactccaccagtt 425 Query: 377 ggcgataagcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggt 436 ||||| |||||||| || ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 426 ggcgagaagcccagtctcatgaccttccgtgaggttgaaactgtgttccatgaatttggg 485 Query: 437 cacgcgctgcagcatatgcttaccagacaagatgaag 473 ||||| || ||||| |||||||| | ||||||||||| Sbjct: 486 cacgcccttcagcacatgcttactaaacaagatgaag 522
>dbj|AK059746.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-H11, full insert sequence Length = 1140 Score = 307 bits (155), Expect = 2e-80 Identities = 284/330 (86%) Strand = Plus / Plus Query: 144 ctgcanatgggttggctcctgtttggaacagngacgttaaattttattgtgtcaaagatt 203 ||||| |||| |||||||||||||||| || || || |||||||| ||||||||||||| Sbjct: 18 ctgcagatggactggctcctgtttggaatagtgatgtcaaattttactgtgtcaaagatt 77 Query: 204 cttccnntagccctgttgcttatttttacttcgacccatactcaagaccatctgaaaaac 263 |||| |||||||||||||||||| ||||| || ||||| |||||||||||||| || | Sbjct: 78 cttcgaatagccctgttgcttatttctactttgatccatattcaagaccatctgagaagc 137 Query: 264 gtggnggggcttggatgaatgtcgncttttctcgtancagngtgctagctcgccatgggg 323 |||| ||||||||||||||||| | |||||||| | | ||||| |||||| |||| Sbjct: 138 gtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgcaatggtt 197 Query: 324 cttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagttggcgata 383 | |||| ||| | ||||||||||||||||| |||||||||| ||||||||||| |||| Sbjct: 198 cacctgtcaggtttcctgttgcccatatggtgtgtaatcagaccccaccagttggtgata 257 Query: 384 agcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggtcacgcgc 443 | ||||| |||||||||||||||||||||||||| | |||||||||||||||||| |||| Sbjct: 258 aacccagtcttatgaccttccgtgaggttgaaactgtgttccatgaatttggtcatgcgc 317 Query: 444 tgcagcatatgcttaccagacaagatgaag 473 ||||||| |||||||||| ||||||||||| Sbjct: 318 tgcagcacatgcttaccaaacaagatgaag 347
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 220 bits (111), Expect = 3e-54 Identities = 212/248 (85%) Strand = Plus / Minus Query: 164 gtttggaacagngacgttaaattttattgtgtcaaagattcttccnntagccctgttgct 223 |||||||| || || || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 35704072 gtttggaatagtgatgtcaaattttactgtgtcaaagattcttcgaatagccctgttgct 35704013 Query: 224 tatttttacttcgacccatactcaagaccatctgaaaaacgtggnggggcttggatgaat 283 ||||| |||||||| ||||| |||||||||||||| || ||||| ||||||||||||||| Sbjct: 35704012 tatttctacttcgatccatattcaagaccatctgagaagcgtggaggggcttggatgaat 35703953 Query: 284 gtcgncttttctcgtancagngtgctagctcgccatggggcttctgtaaggctgcctgtt 343 || | |||||||| | | ||||| |||||| |||| | |||| ||||| |||||| Sbjct: 35703952 gtggttttttctcgcagtcgtgtgcttgctcgcaatggttcacctgtcaggcttcctgtt 35703893 Query: 344 gcccatatggtctgtaatcagatgccaccagttggcgataagcccagccttatgaccttc 403 ||||||||||| |||||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 35703892 gcccatatggtgtgtaatcagaccccaccagttggtgataaacccagtcttatgaccttc 35703833 Query: 404 cgtgaggt 411 |||||||| Sbjct: 35703832 cgtgaggt 35703825 Score = 103 bits (52), Expect = 5e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 63 tgcgtccttactttgcactgcccaaggttatggatggcctcttcagtcttgcaaataagc 122 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 35704252 tgcgtccttactttgcactacccaaggttatggatggcctcttcagtctcgcaaataggc 35704193 Query: 123 tctt 126 |||| Sbjct: 35704192 tctt 35704189 Score = 93.7 bits (47), Expect = 5e-16 Identities = 61/66 (92%) Strand = Plus / Minus Query: 408 aggttgaaaccgngttccatgaatttggtcacgcgctgcagcatatgcttaccagacaag 467 |||||||||| | |||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 35703600 aggttgaaactgtgttccatgaatttggtcatgcgctgcagcacatgcttaccaaacaag 35703541 Query: 468 atgaag 473 |||||| Sbjct: 35703540 atgaag 35703535 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 17 agtgaacgactgcgggaatctaaatatga 45 ||||||||||| ||||||||||||||||| Sbjct: 35704474 agtgaacgactccgggaatctaaatatga 35704446
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 220 bits (111), Expect = 3e-54 Identities = 212/248 (85%) Strand = Plus / Minus Query: 164 gtttggaacagngacgttaaattttattgtgtcaaagattcttccnntagccctgttgct 223 |||||||| || || || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 64686 gtttggaatagtgatgtcaaattttactgtgtcaaagattcttcgaatagccctgttgct 64627 Query: 224 tatttttacttcgacccatactcaagaccatctgaaaaacgtggnggggcttggatgaat 283 ||||| |||||||| ||||| |||||||||||||| || ||||| ||||||||||||||| Sbjct: 64626 tatttctacttcgatccatattcaagaccatctgagaagcgtggaggggcttggatgaat 64567 Query: 284 gtcgncttttctcgtancagngtgctagctcgccatggggcttctgtaaggctgcctgtt 343 || | |||||||| | | ||||| |||||| |||| | |||| ||||| |||||| Sbjct: 64566 gtggttttttctcgcagtcgtgtgcttgctcgcaatggttcacctgtcaggcttcctgtt 64507 Query: 344 gcccatatggtctgtaatcagatgccaccagttggcgataagcccagccttatgaccttc 403 ||||||||||| |||||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 64506 gcccatatggtgtgtaatcagaccccaccagttggtgataaacccagtcttatgaccttc 64447 Query: 404 cgtgaggt 411 |||||||| Sbjct: 64446 cgtgaggt 64439 Score = 103 bits (52), Expect = 5e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 63 tgcgtccttactttgcactgcccaaggttatggatggcctcttcagtcttgcaaataagc 122 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 64866 tgcgtccttactttgcactacccaaggttatggatggcctcttcagtctcgcaaataggc 64807 Query: 123 tctt 126 |||| Sbjct: 64806 tctt 64803 Score = 93.7 bits (47), Expect = 5e-16 Identities = 61/66 (92%) Strand = Plus / Minus Query: 408 aggttgaaaccgngttccatgaatttggtcacgcgctgcagcatatgcttaccagacaag 467 |||||||||| | |||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 64214 aggttgaaactgtgttccatgaatttggtcatgcgctgcagcacatgcttaccaaacaag 64155 Query: 468 atgaag 473 |||||| Sbjct: 64154 atgaag 64149 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 17 agtgaacgactgcgggaatctaaatatga 45 ||||||||||| ||||||||||||||||| Sbjct: 65088 agtgaacgactccgggaatctaaatatga 65060
>ref|NM_121092.2| Arabidopsis thaliana metalloendopeptidase AT5G10540 mRNA, complete cds Length = 2825 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/124 (83%) Strand = Plus / Plus Query: 338 cctgttgcccatatggtctgtaatcagatgccaccagttggcgataagcccagccttatg 397 |||||||| || |||||||| || || | ||||| ||||| || ||||| ||||||||| Sbjct: 1387 cctgttgctcaaatggtctgcaaccaaactccacctgttggtgacaagccaagccttatg 1446 Query: 398 accttccgtgaggttgaaaccgngttccatgaatttggtcacgcgctgcagcatatgctt 457 || ||||||||||| || || | ||||||||||||||| || || || |||||||||||| Sbjct: 1447 acattccgtgaggtagagactgtgttccatgaatttggccatgctcttcagcatatgctt 1506 Query: 458 acca 461 |||| Sbjct: 1507 acca 1510 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 51 atgaggaaggactgcgtccttactttgcactgcccaaggttatggatg 98 ||||||||| |||||| |||||||| || |||| ||||||||||||| Sbjct: 1100 atgaggaagaactgcgaccttacttctcattgccaaaggttatggatg 1147
>gb|AY050978.1| Arabidopsis thaliana putative oligopeptidase A (At5g10540) mRNA, complete cds Length = 2356 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/124 (83%) Strand = Plus / Plus Query: 338 cctgttgcccatatggtctgtaatcagatgccaccagttggcgataagcccagccttatg 397 |||||||| || |||||||| || || | ||||| ||||| || ||||| ||||||||| Sbjct: 1377 cctgttgctcaaatggtctgcaaccaaactccacctgttggtgacaagccaagccttatg 1436 Query: 398 accttccgtgaggttgaaaccgngttccatgaatttggtcacgcgctgcagcatatgctt 457 || ||||||||||| || || | ||||||||||||||| || || || |||||||||||| Sbjct: 1437 acattccgtgaggtagagactgtgttccatgaatttggccatgctcttcagcatatgctt 1496 Query: 458 acca 461 |||| Sbjct: 1497 acca 1500 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 51 atgaggaaggactgcgtccttactttgcactgcccaaggttatggatg 98 ||||||||| |||||| |||||||| || |||| ||||||||||||| Sbjct: 1090 atgaggaagaactgcgaccttacttctcattgccaaaggttatggatg 1137
>gb|BT002369.1| Arabidopsis thaliana clone U10217 putative oligopeptidase A (At5g10540) mRNA, complete cds Length = 2137 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/124 (83%) Strand = Plus / Plus Query: 338 cctgttgcccatatggtctgtaatcagatgccaccagttggcgataagcccagccttatg 397 |||||||| || |||||||| || || | ||||| ||||| || ||||| ||||||||| Sbjct: 1360 cctgttgctcaaatggtctgcaaccaaactccacctgttggtgacaagccaagccttatg 1419 Query: 398 accttccgtgaggttgaaaccgngttccatgaatttggtcacgcgctgcagcatatgctt 457 || ||||||||||| || || | ||||||||||||||| || || || |||||||||||| Sbjct: 1420 acattccgtgaggtagagactgtgttccatgaatttggccatgctcttcagcatatgctt 1479 Query: 458 acca 461 |||| Sbjct: 1480 acca 1483 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 51 atgaggaaggactgcgtccttactttgcactgcccaaggttatggatg 98 ||||||||| |||||| |||||||| || |||| ||||||||||||| Sbjct: 1073 atgaggaagaactgcgaccttacttctcattgccaaaggttatggatg 1120
>ref|NM_125960.2| Arabidopsis thaliana metalloendopeptidase AT5G65620 mRNA, complete cds Length = 2918 Score = 81.8 bits (41), Expect = 2e-12 Identities = 112/136 (82%) Strand = Plus / Plus Query: 324 cttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagttggcgata 383 ||||||| |||||||||||||| || |||||||| || || | |||||||| || || | Sbjct: 1613 cttctgttaggctgcctgttgcacacatggtctgcaaccaaactccaccagtaggtgaca 1672 Query: 384 agcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggtcacgcgc 443 |||| ||||||||||| ||||||||||| || || | || ||||||||||| || || | Sbjct: 1673 agccaagccttatgacattccgtgaggtagagacagtatttcatgaatttggacatgctc 1732 Query: 444 tgcagcatatgcttac 459 | ||||| |||||||| Sbjct: 1733 ttcagcacatgcttac 1748 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 51 atgaggaaggactgcgtccttactttgcactgcccaaggttatggatggcctcttcagtc 110 ||||||||| ||| ||||| ||||| ||||||| |||||||||||||| || ||||||| Sbjct: 1340 atgaggaagaactacgtccatacttctcactgccaaaggttatggatggacttttcagtc 1399 Query: 111 t 111 | Sbjct: 1400 t 1400
>gb|AY142682.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA, complete cds Length = 2407 Score = 81.8 bits (41), Expect = 2e-12 Identities = 112/136 (82%) Strand = Plus / Plus Query: 324 cttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagttggcgata 383 ||||||| |||||||||||||| || |||||||| || || | |||||||| || || | Sbjct: 1610 cttctgttaggctgcctgttgcacacatggtctgcaaccaaactccaccagtaggtgaca 1669 Query: 384 agcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggtcacgcgc 443 |||| ||||||||||| ||||||||||| || || | || ||||||||||| || || | Sbjct: 1670 agccaagccttatgacattccgtgaggtagagacagtatttcatgaatttggacatgctc 1729 Query: 444 tgcagcatatgcttac 459 | ||||| |||||||| Sbjct: 1730 ttcagcacatgcttac 1745 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 51 atgaggaaggactgcgtccttactttgcactgcccaaggttatggatggcctcttcagtc 110 ||||||||| ||| ||||| ||||| ||||||| |||||||||||||| || ||||||| Sbjct: 1337 atgaggaagaactacgtccatacttctcactgccaaaggttatggatggacttttcagtc 1396 Query: 111 t 111 | Sbjct: 1397 t 1397
>gb|AY045936.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA, complete cds Length = 2510 Score = 81.8 bits (41), Expect = 2e-12 Identities = 112/136 (82%) Strand = Plus / Plus Query: 324 cttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagttggcgata 383 ||||||| |||||||||||||| || |||||||| || || | |||||||| || || | Sbjct: 1613 cttctgttaggctgcctgttgcacacatggtctgcaaccaaactccaccagtaggtgaca 1672 Query: 384 agcccagccttatgaccttccgtgaggttgaaaccgngttccatgaatttggtcacgcgc 443 |||| ||||||||||| ||||||||||| || || | || ||||||||||| || || | Sbjct: 1673 agccaagccttatgacattccgtgaggtagagacagtatttcatgaatttggacatgctc 1732 Query: 444 tgcagcatatgcttac 459 | ||||| |||||||| Sbjct: 1733 ttcagcacatgcttac 1748 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 51 atgaggaaggactgcgtccttactttgcactgcccaaggttatggatggcctcttcagtc 110 ||||||||| ||| ||||| ||||| ||||||| |||||||||||||| || ||||||| Sbjct: 1340 atgaggaagaactacgtccatacttctcactgccaaaggttatggatggacttttcagtc 1399 Query: 111 t 111 | Sbjct: 1400 t 1400
>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13 Length = 63921 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 324 cttctgtaaggctgcctgttgcccatatggtctgtaatcagatgccaccagttggcgata 383 ||||||| |||||||||||||| || |||||||| || || | |||||||| || || | Sbjct: 40705 cttctgttaggctgcctgttgcacacatggtctgcaaccaaactccaccagtaggtgaca 40764 Query: 384 agcccagccttatgaccttccgtgaggt 411 |||| ||||||||||| ||||||||||| Sbjct: 40765 agccaagccttatgacattccgtgaggt 40792 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 54 aggaaggactgcgtccttactttgcactgcccaaggttatggatggcctcttcagtct 111 |||||| ||| ||||| ||||| ||||||| |||||||||||||| || |||||||| Sbjct: 40344 aggaagaactacgtccatacttctcactgccaaaggttatggatggacttttcagtct 40401
>emb|BX831351.1|CNS09YQG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2208 Score = 69.9 bits (35), Expect = 7e-09 Identities = 105/126 (83%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 338 cctgttgcccatatggtctgtaatcagatgccaccagttggcgataagccca-gccttat 396 |||||||| || |||||||| || || | ||||| ||||| || ||||||| ||||||| Sbjct: 1369 cctgttgctcaaatggtctgcaaccaaactccacctgttggtgacaagcccaagccttat 1428 Query: 397 gaccttccgtgaggttgaaaccgngttccatgaa-tttggtcacgcgctgcagcatatgc 455 ||| ||||||||||| || || | |||||||||| ||||| || || || |||||||||| Sbjct: 1429 gacattccgtgaggtagagactgtgttccatgaattttggccatgctcttcagcatatgc 1488 Query: 456 ttacca 461 |||||| Sbjct: 1489 ttacca 1494 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 51 atgaggaaggactgcgtccttactttgcactgcccaaggttatggatg 98 ||||||||| |||||| |||||||| || |||| ||||||||||||| Sbjct: 1082 atgaggaagaactgcgaccttacttctcattgccaaaggttatggatg 1129
>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence Length = 113964 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 422 ttccatgaatttggtcacgcgctgcagcatatgcttac 459 |||||||||||||| |||||||| ||||| |||||||| Sbjct: 66116 ttccatgaatttggccacgcgcttcagcacatgcttac 66153
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 338 cctgttgcccatatggtctgtaatcagatgccaccagttggcgataagcccagccttatg 397 |||||||| || |||||||| || || | ||||| ||||| || ||||| ||||||||| Sbjct: 34227 cctgttgctcaaatggtctgcaaccaaactccacctgttggtgacaagccaagccttatg 34168 Query: 398 accttccgtgaggt 411 || ||||||||||| Sbjct: 34167 acattccgtgaggt 34154 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 421 gttccatgaatttggtcacgcgctgcagcatatgcttacca 461 ||||||||||||||| || || || |||||||||||||||| Sbjct: 33737 gttccatgaatttggccatgctcttcagcatatgcttacca 33697 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Minus Query: 54 aggaaggactgcgtccttactttgcactgcccaaggttatggatg 98 |||||| |||||| |||||||| || |||| ||||||||||||| Sbjct: 34600 aggaagaactgcgaccttacttctcattgccaaaggttatggatg 34556
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 422 ttccatgaatttggtcacgcgctgcagcatatgcttac 459 ||||||||||||||||||| || || ||||||||||| Sbjct: 555902 ttccatgaatttggtcacggtcttcaacatatgcttac 555865
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 44.1 bits (22), Expect = 0.41 Identities = 42/49 (85%) Strand = Plus / Plus Query: 413 gaaaccgngttccatgaatttggtcacgcgctgcagcatatgcttacca 461 |||||| |||||||||||||||||| | ||| || |||||||| |||| Sbjct: 1016041 gaaaccctgttccatgaatttggtcatgggctacatcatatgctcacca 1016089
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 421 gttccatgaatttggtcacgcgctgcagcatatgcttacca 461 |||||||||||||||||| | ||| || |||||||| |||| Sbjct: 5616525 gttccatgaatttggtcatgggctacatcatatgctcacca 5616565
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5 Length = 349082 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 421 gttccatgaatttggtcacgcgctgcagcatatgcttacca 461 |||||||||||||||||| | || || ||||||||||||| Sbjct: 211444 gttccatgaatttggtcatggtcttcaacatatgcttacca 211404
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ttccatgaatttggtcacgc 441 |||||||||||||||||||| Sbjct: 1857550 ttccatgaatttggtcacgc 1857531
>gb|AC009321.18| Homo sapiens 12 BAC RP11-392B15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88746 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 ggtctgtaatcagatgccaccagt 375 |||||||||||| ||||||||||| Sbjct: 82861 ggtctgtaatcaaatgccaccagt 82884
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cttaccagacaagatgaagc 474 |||||||||||||||||||| Sbjct: 27529950 cttaccagacaagatgaagc 27529931
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cttaccagacaagatgaagc 474 |||||||||||||||||||| Sbjct: 93921 cttaccagacaagatgaagc 93902 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,176,404 Number of Sequences: 3902068 Number of extensions: 3176404 Number of successful extensions: 48101 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47958 Number of HSP's gapped (non-prelim): 129 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)