| Clone Name | bags6p15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062A17, full insert sequence Length = 2049 Score = 488 bits (246), Expect = e-135 Identities = 384/431 (89%) Strand = Plus / Plus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 798 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 857 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 858 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 917 Query: 121 tctaggcggatagttcagttctcaaatagcaggggtccaggaccatattctcggatagtt 180 ||| || | |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 918 tctcggagaatagttcagttctcaaatagcaggggtccaggtccagattctcggatagtg 977 Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgagatattgcgacttgct 240 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 978 tacatagatggtgcatttgatctattccatgctggacatgttgagatattgcgcctcgct 1037 Query: 241 cgagggcttggagatttcttgcttgttggtattcacacggatcagacaataagttctaca 300 |||| ||||||||||||| ||||||| ||||||||||| || ||||| |||||||| ||| Sbjct: 1038 cgagagcttggagatttcctgcttgtgggtattcacacagaccagactataagttcaaca 1097 Query: 301 cgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctgc 360 ||||||||||||||||||||||||| || |||||| ||||||||||||| | || ||| Sbjct: 1098 agaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgttttggcttgc 1157 Query: 361 cgttatgttgatgaagtaataattggtgctccatgggacattncanaagacatgattaca 420 ||||||||||||||||| || ||||||||||||||||| || | |||| |||||||| Sbjct: 1158 cgttatgttgatgaagtgatcattggtgctccatgggatgtttcgaaagatatgattacc 1217 Query: 421 acattnaatat 431 ||||| ||||| Sbjct: 1218 acatttaatat 1228
>dbj|AK068868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G17, full insert sequence Length = 2065 Score = 488 bits (246), Expect = e-135 Identities = 384/431 (89%) Strand = Plus / Plus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 817 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 876 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 877 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 936 Query: 121 tctaggcggatagttcagttctcaaatagcaggggtccaggaccatattctcggatagtt 180 ||| || | |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 937 tctcggagaatagttcagttctcaaatagcaggggtccaggtccagattctcggatagtg 996 Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgagatattgcgacttgct 240 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 997 tacatagatggtgcatttgatctattccatgctggacatgttgagatattgcgcctcgct 1056 Query: 241 cgagggcttggagatttcttgcttgttggtattcacacggatcagacaataagttctaca 300 |||| ||||||||||||| ||||||| ||||||||||| || ||||| |||||||| ||| Sbjct: 1057 cgagagcttggagatttcctgcttgtgggtattcacacagaccagactataagttcaaca 1116 Query: 301 cgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctgc 360 ||||||||||||||||||||||||| || |||||| ||||||||||||| | || ||| Sbjct: 1117 agaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgttttggcttgc 1176 Query: 361 cgttatgttgatgaagtaataattggtgctccatgggacattncanaagacatgattaca 420 ||||||||||||||||| || ||||||||||||||||| || | |||| |||||||| Sbjct: 1177 cgttatgttgatgaagtgatcattggtgctccatgggatgtttcgaaagatatgattacc 1236 Query: 421 acattnaatat 431 ||||| ||||| Sbjct: 1237 acatttaatat 1247
>gb|AY198340.1| Hordeum vulgare subsp. vulgare phosphoethanolamine cytidylyltransferase mRNA, complete cds Length = 1783 Score = 470 bits (237), Expect = e-129 Identities = 381/430 (88%) Strand = Plus / Plus Query: 2 cagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggtc 61 |||||||||||| ||| ||||||||||||||| || ||||||||| ||||||||||| Sbjct: 785 cagtttctgataataacagccactcttcactacaaagacagttcagtcatgggcatggtc 844 Query: 62 agaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctacat 121 |||| ||||| |||||||| | |||||||||||| | |||||||||||||||||| |||| Sbjct: 845 agaatattgatgatagtggatttggaagtggaacaaaaatatctcattttcttcccacat 904 Query: 122 ctaggcggatagttcagttctcaaatagcaggggtccaggaccatattctcggatagttt 181 || |||||||||| |||||||||||| ||||||||||||||||| |||| ||| |||| | Sbjct: 905 ctcggcggatagtacagttctcaaatggcaggggtccaggaccaaattcccgggtagtgt 964 Query: 182 acatcgatggtgcatttgatctgttccatgctggtcatgttgagatattgcgacttgctc 241 |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 965 acatagatggtgcatttgatctgttccatgctggtcatgtcgagatactgcgacttgctc 1024 Query: 242 gagggcttggagatttcttgcttgttggtattcacacggatcagacaataagttctacac 301 ||||||||||||||||||||||||| || |||||||| |||||||| |||||||| || | Sbjct: 1025 gagggcttggagatttcttgcttgtgggcattcacacagatcagaccataagttcaactc 1084 Query: 302 gaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctgcc 361 |||||||||||||||||||||||||||| |||||||| ||||||||||| | || |||| Sbjct: 1085 gaggaccacatcgcccaatcatgaatctccatgagcgcagtttgagtgttttggcttgcc 1144 Query: 362 gttatgttgatgaagtaataattggtgctccatgggacattncanaagacatgattacaa 421 |||||||||| ||||| || ||||||||||| ||| ||||| | |||||||| |||| | Sbjct: 1145 gttatgttgacgaagtgatcattggtgctccctggcacatttcgaaagacatggttacca 1204 Query: 422 cattnaatat 431 | || ||||| Sbjct: 1205 cttttaatat 1214
>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074L01, complete sequence Length = 115339 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 73828 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 73769 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 73768 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 73709 Query: 121 tctaggcggatagttcagttctcaaatagcaggg 154 ||| || | ||||||||||||||||||||||||| Sbjct: 73708 tctcggagaatagttcagttctcaaatagcaggg 73675 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 292 agttctacacgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtc 351 ||||| ||| ||||||||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 72631 agttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgtt 72572 Query: 352 ctagcctgccgttatgttgatgaagtaataattggtgctccatggga 398 | || |||||||||||||||||||| || ||||||||||||||||| Sbjct: 72571 ttggcttgccgttatgttgatgaagtgatcattggtgctccatggga 72525 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 153 gggtccaggaccatattctcggatagtttacatcgatggtgcatttgatctgttccatgc 212 ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 73146 gggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgc 73087 Query: 213 tggtcatgttgag 225 ||| ||||||||| Sbjct: 73086 tggacatgttgag 73074 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 224 agatattgcgacttgctcgagggcttggagatttcttgcttgttggtattcacacggatc 283 |||||||||| || ||||||| ||||||||||||| ||||||| ||||||||||| || | Sbjct: 72887 agatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagacc 72828 Query: 284 agacaataag 293 |||| ||||| Sbjct: 72827 agactataag 72818
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 1007554 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 1007495 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1007494 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 1007435 Query: 121 tctaggcggatagttcagttctcaaatagcaggg 154 ||| || | ||||||||||||||||||||||||| Sbjct: 1007434 tctcggagaatagttcagttctcaaatagcaggg 1007401 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 292 agttctacacgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtc 351 ||||| ||| ||||||||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 1006357 agttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgtt 1006298 Query: 352 ctagcctgccgttatgttgatgaagtaataattggtgctccatggga 398 | || |||||||||||||||||||| || ||||||||||||||||| Sbjct: 1006297 ttggcttgccgttatgttgatgaagtgatcattggtgctccatggga 1006251 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 153 gggtccaggaccatattctcggatagtttacatcgatggtgcatttgatctgttccatgc 212 ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1006870 gggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgc 1006811 Query: 213 tggtcatgttgag 225 ||| ||||||||| Sbjct: 1006810 tggacatgttgag 1006798 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 224 agatattgcgacttgctcgagggcttggagatttcttgcttgttggtattcacacggatc 283 |||||||||| || ||||||| ||||||||||||| ||||||| ||||||||||| || | Sbjct: 1006611 agatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagacc 1006552 Query: 284 agacaataag 293 |||| ||||| Sbjct: 1006551 agactataag 1006542
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 1075546 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 1075487 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1075486 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 1075427 Query: 121 tctaggcggatagttcagttctcaaatagcaggg 154 ||| || | ||||||||||||||||||||||||| Sbjct: 1075426 tctcggagaatagttcagttctcaaatagcaggg 1075393 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 292 agttctacacgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtc 351 ||||| ||| ||||||||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 1074349 agttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgtt 1074290 Query: 352 ctagcctgccgttatgttgatgaagtaataattggtgctccatggga 398 | || |||||||||||||||||||| || ||||||||||||||||| Sbjct: 1074289 ttggcttgccgttatgttgatgaagtgatcattggtgctccatggga 1074243 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 153 gggtccaggaccatattctcggatagtttacatcgatggtgcatttgatctgttccatgc 212 ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1074864 gggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgc 1074805 Query: 213 tggtcatgttgag 225 ||| ||||||||| Sbjct: 1074804 tggacatgttgag 1074792 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 224 agatattgcgacttgctcgagggcttggagatttcttgcttgttggtattcacacggatc 283 |||||||||| || ||||||| ||||||||||||| ||||||| ||||||||||| || | Sbjct: 1074605 agatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagacc 1074546 Query: 284 agacaataag 293 |||| ||||| Sbjct: 1074545 agactataag 1074536
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 1073267 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 1073208 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1073207 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 1073148 Query: 121 tctaggcggatagttcagttctcaaatagcaggg 154 ||| || | ||||||||||||||||||||||||| Sbjct: 1073147 tctcggagaatagttcagttctcaaatagcaggg 1073114 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 292 agttctacacgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtc 351 ||||| ||| ||||||||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 1072070 agttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgtt 1072011 Query: 352 ctagcctgccgttatgttgatgaagtaataattggtgctccatggga 398 | || |||||||||||||||||||| || ||||||||||||||||| Sbjct: 1072010 ttggcttgccgttatgttgatgaagtgatcattggtgctccatggga 1071964 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 153 gggtccaggaccatattctcggatagtttacatcgatggtgcatttgatctgttccatgc 212 ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1072585 gggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgc 1072526 Query: 213 tggtcatgttgag 225 ||| ||||||||| Sbjct: 1072525 tggacatgttgag 1072513 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 224 agatattgcgacttgctcgagggcttggagatttcttgcttgttggtattcacacggatc 283 |||||||||| || ||||||| ||||||||||||| ||||||| ||||||||||| || | Sbjct: 1072326 agatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagacc 1072267 Query: 284 agacaataag 293 |||| ||||| Sbjct: 1072266 agactataag 1072257
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 1007554 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 1007495 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1007494 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 1007435 Query: 121 tctaggcggatagttcagttctcaaatagcaggg 154 ||| || | ||||||||||||||||||||||||| Sbjct: 1007434 tctcggagaatagttcagttctcaaatagcaggg 1007401 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 292 agttctacacgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtc 351 ||||| ||| ||||||||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 1006357 agttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgtt 1006298 Query: 352 ctagcctgccgttatgttgatgaagtaataattggtgctccatggga 398 | || |||||||||||||||||||| || ||||||||||||||||| Sbjct: 1006297 ttggcttgccgttatgttgatgaagtgatcattggtgctccatggga 1006251 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 153 gggtccaggaccatattctcggatagtttacatcgatggtgcatttgatctgttccatgc 212 ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1006870 gggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgc 1006811 Query: 213 tggtcatgttgag 225 ||| ||||||||| Sbjct: 1006810 tggacatgttgag 1006798 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 224 agatattgcgacttgctcgagggcttggagatttcttgcttgttggtattcacacggatc 283 |||||||||| || ||||||| ||||||||||||| ||||||| ||||||||||| || | Sbjct: 1006611 agatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagacc 1006552 Query: 284 agacaataag 293 |||| ||||| Sbjct: 1006551 agactataag 1006542
>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 97056 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 1 tcagtttctgataggcacaaccactcttcactacagaggcagttcagttctgggcatggt 60 |||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 2825 tcagcttctgatagtcacaaccactcttcactacaaaggcagttcagtcacgggcatggc 2766 Query: 61 cagaagattgacgatagtgggtctggaagtggaactagaatatctcattttcttcctaca 120 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 2765 cagaaaattgatgatagtggatctggaagtggaactaggatatctcattttcttcctaca 2706 Query: 121 tctaggcggatagttcagttctcaaatagcaggg 154 ||| || | ||||||||||||||||||||||||| Sbjct: 2705 tctcggagaatagttcagttctcaaatagcaggg 2672 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 292 agttctacacgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtc 351 ||||| ||| ||||||||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 1628 agttcaacaagaggaccacatcgcccaatcatgaacctccatgagagaagtttgagtgtt 1569 Query: 352 ctagcctgccgttatgttgatgaagtaataattggtgctccatggga 398 | || |||||||||||||||||||| || ||||||||||||||||| Sbjct: 1568 ttggcttgccgttatgttgatgaagtgatcattggtgctccatggga 1522 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 153 gggtccaggaccatattctcggatagtttacatcgatggtgcatttgatctgttccatgc 212 ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 2141 gggtccaggtccagattctcggatagtgtacatagatggtgcatttgatctattccatgc 2082 Query: 213 tggtcatgttgag 225 ||| ||||||||| Sbjct: 2081 tggacatgttgag 2069 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 224 agatattgcgacttgctcgagggcttggagatttcttgcttgttggtattcacacggatc 283 |||||||||| || ||||||| ||||||||||||| ||||||| ||||||||||| || | Sbjct: 1882 agatattgcgcctcgctcgagagcttggagatttcctgcttgtgggtattcacacagacc 1823 Query: 284 agacaataag 293 |||| ||||| Sbjct: 1822 agactataag 1813
>ref|NM_129424.3| Arabidopsis thaliana ethanolamine-phosphate cytidylyltransferase/ nucleotidyltransferase AT2G38670 mRNA, complete cds Length = 1616 Score = 93.7 bits (47), Expect = 5e-16 Identities = 178/219 (81%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgagatattgcgacttgct 240 ||||| |||||||| |||||||| ||||||||||| ||||||||||| | ||| |||| Sbjct: 884 tacatagatggtgcttttgatcttttccatgctggccatgttgagattcttagacgtgct 943 Query: 241 cgagggcttggaga-tttcttgcttgttggtattcacacggatcagacaataagttctac 299 |||| ||||||||| |||||| ||||||||||| || | || ||||| | ||| ||| Sbjct: 944 cgagagcttggagactttctt-cttgttggtatacataatgaccagactgtcagtgctaa 1002 Query: 300 acgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctg 359 ||||||| | |||||||| || |||||||| ||||| | || || || || || || || Sbjct: 1003 acgaggagcgcatcgccctattatgaatctccatgaaaggagcttaagcgttctggcgtg 1062 Query: 360 ccgttatgttgatgaagtaataattggtgctccatggga 398 ||| || || ||||| || |||||||||||||||||||| Sbjct: 1063 ccgctacgtggatgaggtgataattggtgctccatggga 1101
>gb|AY128807.1| Arabidopsis thaliana putative phospholipid cytidylyltransferase (At2g38670) mRNA, complete cds Length = 1345 Score = 93.7 bits (47), Expect = 5e-16 Identities = 178/219 (81%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgagatattgcgacttgct 240 ||||| |||||||| |||||||| ||||||||||| ||||||||||| | ||| |||| Sbjct: 772 tacatagatggtgcttttgatcttttccatgctggccatgttgagattcttagacgtgct 831 Query: 241 cgagggcttggaga-tttcttgcttgttggtattcacacggatcagacaataagttctac 299 |||| ||||||||| |||||| ||||||||||| || | || ||||| | ||| ||| Sbjct: 832 cgagagcttggagactttctt-cttgttggtatacataatgaccagactgtcagtgctaa 890 Query: 300 acgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctg 359 ||||||| | |||||||| || |||||||| ||||| | || || || || || || || Sbjct: 891 acgaggagcgcatcgccctattatgaatctccatgaaaggagcttaagcgttctggcgtg 950 Query: 360 ccgttatgttgatgaagtaataattggtgctccatggga 398 ||| || || ||||| || |||||||||||||||||||| Sbjct: 951 ccgctacgtggatgaggtgataattggtgctccatggga 989
>gb|AY092984.1| Arabidopsis thaliana putative phospholipid cytidylyltransferase (At2g38670) mRNA, complete cds Length = 1610 Score = 93.7 bits (47), Expect = 5e-16 Identities = 178/219 (81%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgagatattgcgacttgct 240 ||||| |||||||| |||||||| ||||||||||| ||||||||||| | ||| |||| Sbjct: 879 tacatagatggtgcttttgatcttttccatgctggccatgttgagattcttagacgtgct 938 Query: 241 cgagggcttggaga-tttcttgcttgttggtattcacacggatcagacaataagttctac 299 |||| ||||||||| |||||| ||||||||||| || | || ||||| | ||| ||| Sbjct: 939 cgagagcttggagactttctt-cttgttggtatacataatgaccagactgtcagtgctaa 997 Query: 300 acgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctg 359 ||||||| | |||||||| || |||||||| ||||| | || || || || || || || Sbjct: 998 acgaggagcgcatcgccctattatgaatctccatgaaaggagcttaagcgttctggcgtg 1057 Query: 360 ccgttatgttgatgaagtaataattggtgctccatggga 398 ||| || || ||||| || |||||||||||||||||||| Sbjct: 1058 ccgctacgtggatgaggtgataattggtgctccatggga 1096
>emb|BX821407.1|CNS0AA5Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 960 Score = 71.9 bits (36), Expect = 2e-09 Identities = 177/220 (80%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgagatattgcgac-ttgc 239 ||||| |||||||| |||||||| ||||||||||| ||||||||||| | ||| | || Sbjct: 319 tacatagatggtgcttttgatcttttccatgctggccatgttgagattcttagacgtggc 378 Query: 240 tcgagggcttggaga-tttcttgcttgttggtattcacacggatcagacaataagttcta 298 ||||| ||||||||| |||||| ||||||||||| || | || || || | ||| ||| Sbjct: 379 tcgagagcttggagactttctt-cttgttggtatacataatgaccatactgtcagtgcta 437 Query: 299 cacgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcct 358 ||||||| | |||||||| || |||||||| ||||| | || || || || || || | Sbjct: 438 aacgaggagcgcatcgccctattatgaatctccatgaaaggagcttaagcgttctggcgt 497 Query: 359 gccgttatgttgatgaagtaataattggtgctccatggga 398 |||| || || ||||| || |||||||||||||||||||| Sbjct: 498 gccgctacgtggatgaggtgataattggtgctccatggga 537
>gb|BT013823.1| Lycopersicon esculentum clone 132747F, mRNA sequence Length = 1858 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 170 ctcggatagtttacatcgatggtgcatttgatctgttccatgctggtcatgttgagatat 229 |||| ||||| || || ||||| || |||||||| ||||||||||| ||||| ||||||| Sbjct: 1106 ctcgcatagtctatattgatggcgcctttgatcttttccatgctggacatgtagagatat 1165 Query: 230 tgcgacttgctcgagggcttggaga 254 | | ||||||||||| |||||||| Sbjct: 1166 taaggcttgctcgaggacttggaga 1190 Score = 46.1 bits (23), Expect = 0.095 Identities = 56/68 (82%) Strand = Plus / Plus Query: 364 tatgttgatgaagtaataattggtgctccatgggacattncanaagacatgattacaaca 423 |||| ||||||||| || |||||||||||| |||| | || |||| ||||| |||||| Sbjct: 1300 tatgctgatgaagtgattattggtgctccaggggaggtgtcaaaagatatgataacaaca 1359 Query: 424 ttnaatat 431 || ||||| Sbjct: 1360 tttaatat 1367
>dbj|AP004469.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15D01, TM0004a, complete sequence Length = 92631 Score = 65.9 bits (33), Expect = 1e-07 Identities = 82/99 (82%) Strand = Plus / Minus Query: 316 ccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctgccgttatgttgatgaa 375 ||||| ||| |||| |||||||| ||| | ||||| ||||| |||||| ||||||||||| Sbjct: 39861 ccaattatgcatctacatgagcggagtcttagtgtgctagcttgccgtcatgttgatgaa 39802 Query: 376 gtaataattggtgctccatgggacattncanaagacatg 414 || || |||||||| || ||||| ||| || | |||||| Sbjct: 39801 gtcattattggtgcaccttgggaaattacaaaggacatg 39763 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgag 225 ||||| ||||| ||||||||||| |||||||| || ||||||||| Sbjct: 40219 tacattgatggggcatttgatctcttccatgcagggcatgttgag 40175
>gb|AY109975.1| Zea mays CL914_1 mRNA sequence Length = 1309 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 355 gcctgccgttatgttgatgaagtaataattggtgctccatggga 398 ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 450 gcctgccgttatgttgatgaagtcattattggtgcaccatggga 493
>gb|AC005499.3| Arabidopsis thaliana chromosome 2 clone T6A23 map ve018, complete sequence Length = 107541 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 181 tacatcgatggtgcatttgatctgttccatgctggtcatgttgag 225 ||||| |||||||| |||||||| ||||||||||| ||||||||| Sbjct: 46674 tacatagatggtgcttttgatcttttccatgctggccatgttgag 46630 Score = 46.1 bits (23), Expect = 0.095 Identities = 80/99 (80%) Strand = Plus / Minus Query: 300 acgaggaccacatcgcccaatcatgaatcttcatgagcgaagtttgagtgtcctagcctg 359 ||||||| | |||||||| || |||||||| ||||| | || || || || || || || Sbjct: 46091 acgaggagcgcatcgccctattatgaatctccatgaaaggagcttaagcgttctggcgtg 46032 Query: 360 ccgttatgttgatgaagtaataattggtgctccatggga 398 ||| || || ||||| || |||||||||||||||||||| Sbjct: 46031 ccgctacgtggatgaggtgataattggtgctccatggga 45993
>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence Length = 152468 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 153 gggtccaggaccatattctcggatagtttacatcgatggtgcatttgatctgttccatgc 212 |||||| |||||| || |||| || || ||||| ||||| ||||||||||| |||||||| Sbjct: 78852 gggtcccggaccaaatgctcgtattgtatacattgatggagcatttgatctcttccatgc 78793 Query: 213 tggtcatgtt 222 || |||||| Sbjct: 78792 aggccatgtt 78783 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 360 ccgttatgttgatgaagtaataattggtgc 389 |||||||||||||||||| || |||||||| Sbjct: 78422 ccgttatgttgatgaagtcattattggtgc 78393
>ref|NM_196259.1| Oryza sativa (japonica cultivar-group) putative phospholipid cytidylyltransferase (OSJNBa0094J09.9), mRNA Length = 2229 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Plus Query: 364 tatgttgatgaagtaataattggtgctccatggga 398 |||||||||||||| ||||| ||||| |||||||| Sbjct: 2044 tatgttgatgaagttataataggtgccccatggga 2078
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 364 tatgttgatgaagtaataattggtgctccatggga 398 |||||||||||||| ||||| ||||| |||||||| Sbjct: 39098 tatgttgatgaagttataataggtgccccatggga 39064
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 364 tatgttgatgaagtaataattggtgctccatggga 398 |||||||||||||| ||||| ||||| |||||||| Sbjct: 12239942 tatgttgatgaagttataataggtgccccatggga 12239908
>gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-49p3, complete sequence Length = 127058 Score = 46.1 bits (23), Expect = 0.095 Identities = 50/59 (84%) Strand = Plus / Minus Query: 88 agtggaactagaatatctcattttcttcctacatctaggcggatagttcagttctcaaa 146 ||||||||| | ||||||||||||| ||||||||| | | || |||||||||||||| Sbjct: 115 agtggaactcgtgtatctcattttctgcctacatctcgtagaattgttcagttctcaaa 57
>dbj|AK099943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121N21, full insert sequence Length = 1900 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Plus Query: 364 tatgttgatgaagtaataattggtgctccatggga 398 |||||||||||||| ||||| ||||| |||||||| Sbjct: 1134 tatgttgatgaagttataataggtgccccatggga 1168
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 364 tatgttgatgaagtaataattggtgctccatggga 398 |||||||||||||| ||||| ||||| |||||||| Sbjct: 12247282 tatgttgatgaagttataataggtgccccatggga 12247248
>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence Length = 195428 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 gaatatctcattttcttccta 118 ||||||||||||||||||||| Sbjct: 34928 gaatatctcattttcttccta 34908 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gaatatctcattttcttcct 117 |||||||||||||||||||| Sbjct: 56920 gaatatctcattttcttcct 56939
>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5 Length = 281723 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 tatgttgatgaagtaataattggtg 388 |||||||||||||||| |||||||| Sbjct: 215256 tatgttgatgaagtaacaattggtg 215232
>gb|AC016839.12| Homo sapiens chromosome 18, clone RP11-399L5, complete sequence Length = 152689 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cttggagatttcttgcttgtt 267 ||||||||||||||||||||| Sbjct: 124409 cttggagatttcttgcttgtt 124429
>ref|NM_100282.2| Arabidopsis thaliana phosphatidylcholine-sterol O-acyltransferase AT1G04010 mRNA, complete cds Length = 2478 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ttccatgctggtcatgttga 224 |||||||||||||||||||| Sbjct: 1129 ttccatgctggtcatgttga 1110
>gb|AY989885.1| Arabidopsis thaliana phospholipid:sterol acyl transferase (PSAT) mRNA, partial cds Length = 1899 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ttccatgctggtcatgttga 224 |||||||||||||||||||| Sbjct: 1026 ttccatgctggtcatgttga 1007
>ref|XM_949807.1| Theileria annulata strain Ankara hypothetical protein (TA03335) partial mRNA Length = 2697 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tgagcgaagtttgagtgtcc 352 |||||||||||||||||||| Sbjct: 893 tgagcgaagtttgagtgtcc 874
>gb|AC156610.10| Mus musculus chromosome 7, clone RP23-331C4, complete sequence Length = 237129 Score = 40.1 bits (20), Expect = 5.8 Identities = 24/26 (92%) Strand = Plus / Plus Query: 387 tgctccatgggacattncanaagaca 412 |||||||||||||||| || |||||| Sbjct: 209128 tgctccatgggacattacagaagaca 209153
>gb|AC090531.18| Homo sapiens 12q BAC RP11-413B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204468 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 attttcttcctacatctagg 126 |||||||||||||||||||| Sbjct: 7858 attttcttcctacatctagg 7839
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gcccaatcatgaatcttcat 333 |||||||||||||||||||| Sbjct: 8765362 gcccaatcatgaatcttcat 8765381
>emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in linkage group 21, complete sequence Length = 178610 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 actcttcactacagaggcag 42 |||||||||||||||||||| Sbjct: 174244 actcttcactacagaggcag 174225
>gb|AC154489.2| Mus musculus BAC clone RP23-205G15 from chromosome 14, complete sequence Length = 210483 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aactagaatatctcattttc 112 |||||||||||||||||||| Sbjct: 16752 aactagaatatctcattttc 16733
>gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, complete sequence Length = 184203 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tggaactagaatatctcatt 109 |||||||||||||||||||| Sbjct: 72184 tggaactagaatatctcatt 72203
>gb|AC003027.1| Arabidopsis thaliana chromosome I BAC F21M11 genomic sequence, complete sequence Length = 119914 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ttccatgctggtcatgttga 224 |||||||||||||||||||| Sbjct: 22888 ttccatgctggtcatgttga 22869 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,443,098 Number of Sequences: 3902068 Number of extensions: 3443098 Number of successful extensions: 59623 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59406 Number of HSP's gapped (non-prelim): 214 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)