ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L11862.1|BLYVATP57A Hordeum vulgare vacuolar ATPase B subunit... 194 3e-47
2gb|AF375052.1|AF375052 Oryza sativa vacuolar ATPase B subunit mR... 163 1e-37
3dbj|AK099907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 1e-37
4dbj|AK064802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 1e-37
5gb|AY104180.1| Zea mays PCO062733 mRNA sequence 121 4e-25
6gb|L11873.1|BLYVATP57B Hordeum vulgare vacuolar ATPase B subunit... 107 6e-21
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-18
8dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-18
9dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-18
10dbj|AB055106.1| Oryza sativa (japonica cultivar-group) V-ATPase ... 100 1e-18
11gb|BT016637.1| Zea mays clone Contig470 mRNA sequence 98 5e-18
12gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome... 62 3e-07
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-07
14dbj|AK100817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-07
15dbj|AB055105.1| Oryza sativa (japonica cultivar-group) V-ATPase ... 62 3e-07
16dbj|AK103104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-06
17dbj|AK059850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-06
18gb|AF220611.1|AF220611 Nicotiana tabacum vacuolar H+-ATPase B su... 58 5e-06
19ref|NM_106251.2| Arabidopsis thaliana ATP binding / hydrogen-exp... 54 7e-05
20gb|AY125532.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, com... 54 7e-05
21gb|AY094424.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, com... 54 7e-05
22gb|J04185.1|ATHATPASE Arabidopsis thaliana nucleotide-binding su... 54 7e-05
23ref|NM_101877.2| Arabidopsis thaliana ATP binding / hydrogen-tra... 50 0.001
24ref|NM_202142.1| Arabidopsis thaliana ATP binding / hydrogen-exp... 50 0.001
25gb|BT000150.1| Arabidopsis thaliana Unknown protein (At1g20260) ... 50 0.001
26gb|AY062616.1| Arabidopsis thaliana Unknown protein (F14O10.13) ... 50 0.001
27emb|BX818393.1|CNS0AAXF Arabidopsis thaliana Full-length cDNA Co... 50 0.001
28dbj|AK176750.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 50 0.001
29dbj|AK176641.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 50 0.001
30dbj|AK176915.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 50 0.001
31dbj|AK176408.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 50 0.001
32dbj|AK175727.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 50 0.001
33dbj|AK175169.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 50 0.001
34ref|NM_120012.3| Arabidopsis thaliana ATP binding / hydrogen-exp... 48 0.004
35ref|NM_001036731.1| Arabidopsis thaliana ATP binding / hydrogen-... 48 0.004
36ref|NM_202978.1| Arabidopsis thaliana ATP binding / hydrogen-exp... 48 0.004
37ref|NM_001036730.1| Arabidopsis thaliana ATP binding / hydrogen-... 48 0.004
38gb|AY059167.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, co... 48 0.004
39gb|AY039518.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, co... 48 0.004
40gb|AY045609.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, co... 44 0.070
41emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in ... 40 1.1
42gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, comp... 40 1.1
43emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in... 40 1.1
44emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 i... 40 1.1
45emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, co... 40 1.1
46emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in ... 40 1.1
47emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 i... 40 1.1
48emb|BX255897.3| Zebrafish DNA sequence from clone DKEY-263B2 in ... 40 1.1
49emb|BX927281.25| Zebrafish DNA sequence from clone CH211-255P12 ... 40 1.1
50emb|CR381668.8| Zebrafish DNA sequence from clone CH211-238A12 i... 40 1.1
51emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 i... 40 1.1
52emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in... 40 1.1
53emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 1.1
54emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, ... 40 1.1
55ref|NM_191702.1| Oryza sativa (japonica cultivar-group), predic... 38 4.3
56ref|XM_786517.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 4.3
57gb|AC093401.4| Homo sapiens BAC clone RP11-93M19 from 2, complet... 38 4.3
58emb|AJ438590.1|MCR438590 Mesembryanthemum crystallinum mRNA for ... 38 4.3
59dbj|AK103899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.3 
>gb|L11862.1|BLYVATP57A Hordeum vulgare vacuolar ATPase B subunit isoform mRNA, complete
           cds
          Length = 1923

 Score =  194 bits (98), Expect = 3e-47
 Identities = 98/98 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 193

                                                 
Query: 61  ggcccaaaataccaggagattgtaaacatccgattggg 98
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggcccaaaataccaggagattgtaaacatccgattggg 231
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>gb|AF375052.1|AF375052 Oryza sativa vacuolar ATPase B subunit mRNA, complete cds
          Length = 1947

 Score =  163 bits (82), Expect = 1e-37
 Identities = 94/98 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 202 atggagtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaag 261

                                                 
Query: 61  ggcccaaaataccaggagattgtaaacatccgattggg 98
           |||||||| |||||||| ||||||||||||||||||||
Sbjct: 262 ggcccaaagtaccaggaaattgtaaacatccgattggg 299
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>dbj|AK099907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A19, full
           insert sequence
          Length = 1940

 Score =  163 bits (82), Expect = 1e-37
 Identities = 94/98 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 195 atggagtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaag 254

                                                 
Query: 61  ggcccaaaataccaggagattgtaaacatccgattggg 98
           |||||||| |||||||| ||||||||||||||||||||
Sbjct: 255 ggcccaaagtaccaggaaattgtaaacatccgattggg 292
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>dbj|AK064802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D11, full
           insert sequence
          Length = 1933

 Score =  163 bits (82), Expect = 1e-37
 Identities = 94/98 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 184 atggagtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaag 243

                                                 
Query: 61  ggcccaaaataccaggagattgtaaacatccgattggg 98
           |||||||| |||||||| ||||||||||||||||||||
Sbjct: 244 ggcccaaagtaccaggaaattgtaaacatccgattggg 281
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>gb|AY104180.1| Zea mays PCO062733 mRNA sequence
          Length = 2013

 Score =  121 bits (61), Expect = 4e-25
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||||||||| || ||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 217 atggagtacaggactgtatctggtgtggccgggcctctggttatcttggataaagtaaag 276

                                            
Query: 61  ggcccaaaataccaggagattgtaaacatccga 93
           |||||||| ||||| || |||||||||||||||
Sbjct: 277 ggcccaaagtaccaagaaattgtaaacatccga 309
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>gb|L11873.1|BLYVATP57B Hordeum vulgare vacuolar ATPase B subunit mRNA, complete cds
          Length = 1778

 Score =  107 bits (54), Expect = 6e-21
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| ||||| || || ||||||||||| ||  ||||||| |||||||||||||||
Sbjct: 89  atggagtataggactgtctccggtgtggcagggccgttggttattttggacaaagtaaag 148

                                                 
Query: 61  ggcccaaaataccaggagattgtaaacatccgattggg 98
           |||||||| || ||||||||||| ||||||||||||||
Sbjct: 149 ggcccaaagtatcaggagattgtgaacatccgattggg 186
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 99.6 bits (50), Expect = 1e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                          
Query: 4        gagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
                ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21619576 gagtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 21619519



 Score = 63.9 bits (32), Expect = 8e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 59       agggcccaaaataccaggagattgtaaacatccgattggg 98
                |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 21619431 agggcccaaagtaccaggaaattgtaaacatccgattggg 21619392
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>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0567G03
          Length = 196834

 Score = 99.6 bits (50), Expect = 1e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                        
Query: 4      gagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
              ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 176760 gagtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 176703



 Score = 63.9 bits (32), Expect = 8e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                      
Query: 59     agggcccaaaataccaggagattgtaaacatccgattggg 98
              |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 176615 agggcccaaagtaccaggaaattgtaaacatccgattggg 176576
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>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062E01
          Length = 161804

 Score = 99.6 bits (50), Expect = 1e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                       
Query: 4     gagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
             ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 18507 gagtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 18450



 Score = 63.9 bits (32), Expect = 8e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 59    agggcccaaaataccaggagattgtaaacatccgattggg 98
             |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 18362 agggcccaaagtaccaggaaattgtaaacatccgattggg 18323
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>dbj|AB055106.1| Oryza sativa (japonica cultivar-group) V-ATPase B gene for vacuolar
            ATPase B subunit, complete cds
          Length = 6033

 Score = 99.6 bits (50), Expect = 1e-18
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                      
Query: 4    gagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
            ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1467 gagtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 1524



 Score = 63.9 bits (32), Expect = 8e-08
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 59   agggcccaaaataccaggagattgtaaacatccgattggg 98
            |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1612 agggcccaaagtaccaggaaattgtaaacatccgattggg 1651
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>gb|BT016637.1| Zea mays clone Contig470 mRNA sequence
          Length = 950

 Score = 97.6 bits (49), Expect = 5e-18
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||||||||| || |||||||| || || |||||||| || ||||| |||||||||
Sbjct: 202 atggagtacaggactgtatctggtgttgctgggcctctggtcatattggataaagtaaag 261

                                            
Query: 61  ggcccaaaataccaggagattgtaaacatccga 93
           |||||||| ||||| || |||||||||||||||
Sbjct: 262 ggcccaaagtaccaagaaattgtaaacatccga 294
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>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02,
             complete sequence
          Length = 138584

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 19    tctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
             ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 51705 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 51663



 Score = 44.1 bits (22), Expect = 0.070
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 65    caaaataccaggagattgtaaacatccgattggg 98
             |||| ||| |||| ||||||||||||||||||||
Sbjct: 51562 caaagtactaggaaattgtaaacatccgattggg 51529
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 19       tctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
                ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 23847870 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 23847828



 Score = 44.1 bits (22), Expect = 0.070
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 65       caaaataccaggagattgtaaacatccgattggg 98
                |||| ||| |||| ||||||||||||||||||||
Sbjct: 23847727 caaagtactaggaaattgtaaacatccgattggg 23847694
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>dbj|AK100817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122D13, full
            insert sequence
          Length = 2242

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 19   tctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
            ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 1340 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 1382



 Score = 44.1 bits (22), Expect = 0.070
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 65   caaaataccaggagattgtaaacatccgattggg 98
            |||| ||| |||| ||||||||||||||||||||
Sbjct: 1483 caaagtactaggaaattgtaaacatccgattggg 1516
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>dbj|AB055105.1| Oryza sativa (japonica cultivar-group) V-ATPase B pseudogene for
            vacuolar ATPase B subunit
          Length = 4116

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 19   tctggtgtggcaggacctctggttatcttggacaaagtaaagg 61
            ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 1418 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 1460



 Score = 44.1 bits (22), Expect = 0.070
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 65   caaaataccaggagattgtaaacatccgattggg 98
            |||| ||| |||| ||||||||||||||||||||
Sbjct: 1561 caaagtactaggaaattgtaaacatccgattggg 1594
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>dbj|AK103104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O17, full
            insert sequence
          Length = 1876

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 19   tctggtgtggcaggacctctggttatcttggacaaagtaaag 60
            ||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 1036 tctggtgtgccaggacctctgtttatcttggataaagtaaag 1077
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>dbj|AK059850.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G02, full
           insert sequence
          Length = 1178

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 19  tctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           ||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 575 tctggtgtgccaggacctctgtttatcttggataaagtaaag 616
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>gb|AF220611.1|AF220611 Nicotiana tabacum vacuolar H+-ATPase B subunit mRNA, complete cds
          Length = 1910

 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 22  ggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccaggagatt 81
           ||||| || ||||| ||||||||| | |||||||| ||||| || || ||||||||||||
Sbjct: 106 ggtgttgctggaccgctggttatccttgacaaagttaagggacccaagtaccaggagatt 165

                            
Query: 82  gtaaacatccgattggg 98
           || ||||| || |||||
Sbjct: 166 gttaacattcggttggg 182
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>ref|NM_106251.2| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT1G76030 mRNA,
           complete cds
          Length = 1840

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||  |||| ||  | |||||||| |||
Sbjct: 155 atggagtatagaactgtttctggtgttgctggaccattggtcattcttgacaaagtgaag 214

                                  
Query: 61  ggcccaaaataccaggagattgt 83
           || ||||| ||||||||||||||
Sbjct: 215 ggtccaaagtaccaggagattgt 237
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>gb|AY125532.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, complete cds
          Length = 1461

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||  |||| ||  | |||||||| |||
Sbjct: 49  atggagtatagaactgtttctggtgttgctggaccattggtcattcttgacaaagtgaag 108

                                  
Query: 61  ggcccaaaataccaggagattgt 83
           || ||||| ||||||||||||||
Sbjct: 109 ggtccaaagtaccaggagattgt 131
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>gb|AY094424.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, complete cds
          Length = 1839

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||  |||| ||  | |||||||| |||
Sbjct: 155 atggagtatagaactgtttctggtgttgctggaccattggtcattcttgacaaagtgaag 214

                                  
Query: 61  ggcccaaaataccaggagattgt 83
           || ||||| ||||||||||||||
Sbjct: 215 ggtccaaagtaccaggagattgt 237
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>gb|J04185.1|ATHATPASE Arabidopsis thaliana nucleotide-binding subunit of vacuolar ATPase
           mRNA, complete cds
          Length = 1863

 Score = 54.0 bits (27), Expect = 7e-05
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||  |||| ||  | |||||||| |||
Sbjct: 178 atggagtatagaactgtttctggtgttgctggaccattggtcattcttgacaaagtgaag 237

                                  
Query: 61  ggcccaaaataccaggagattgt 83
           || ||||| ||||||||||||||
Sbjct: 238 ggtccaaagtaccaggagattgt 260
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>ref|NM_101877.2| Arabidopsis thaliana ATP binding / hydrogen-transporting ATP
           synthase, rotational mechanism / hydrogen-transporting
           ATPase, rotational mechanism AT1G20260 transcript
           variant AT1G20260.1 mRNA, complete cds
          Length = 1815

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 269
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>ref|NM_202142.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT1G20260 transcript
           variant AT1G20260.2 mRNA, complete cds
          Length = 1927

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 269
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>gb|BT000150.1| Arabidopsis thaliana Unknown protein (At1g20260) mRNA, complete cds
          Length = 1541

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 79  ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 131
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>gb|AY062616.1| Arabidopsis thaliana Unknown protein (F14O10.13) mRNA, complete cds
          Length = 1816

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 269
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>emb|BX818393.1|CNS0AAXF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL76ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1737

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 182 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 234
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>dbj|AK176750.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL25-28-P20
          Length = 1890

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 195 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 247
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>dbj|AK176641.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL25-17-J11
          Length = 1890

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 195 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 247
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>dbj|AK176915.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL25-49-G23
          Length = 1897

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 231 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 283
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>dbj|AK176408.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL24-13-A20
          Length = 1897

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 231 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 283
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>dbj|AK175727.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL22-27-D19
          Length = 1794

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 197 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 249
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>dbj|AK175169.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL21-58-M18
          Length = 1872

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 31  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgt 83
           |||||| |||| ||| | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 205 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgt 257
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>ref|NM_120012.3| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.1 mRNA, complete cds
          Length = 2347

 Score = 48.1 bits (24), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||||| || ||| | || ||||| |||
Sbjct: 101 atggagtatagaactgtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaag 160

                                           
Query: 61  ggcccaaaataccaggagattgtaaacatccg 92
           || || |||||||| || ||||| || |||||
Sbjct: 161 gggcctaaataccaagaaattgtcaatatccg 192
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>ref|NM_001036731.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.4 mRNA, complete cds
          Length = 2386

 Score = 48.1 bits (24), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||||| || ||| | || ||||| |||
Sbjct: 140 atggagtatagaactgtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaag 199

                                           
Query: 61  ggcccaaaataccaggagattgtaaacatccg 92
           || || |||||||| || ||||| || |||||
Sbjct: 200 gggcctaaataccaagaaattgtcaatatccg 231
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>ref|NM_202978.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.2 mRNA, complete cds
          Length = 2377

 Score = 48.1 bits (24), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||||| || ||| | || ||||| |||
Sbjct: 131 atggagtatagaactgtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaag 190

                                           
Query: 61  ggcccaaaataccaggagattgtaaacatccg 92
           || || |||||||| || ||||| || |||||
Sbjct: 191 gggcctaaataccaagaaattgtcaatatccg 222
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>ref|NM_001036730.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.3 mRNA, complete cds
          Length = 2485

 Score = 48.1 bits (24), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||||| || ||| | || ||||| |||
Sbjct: 239 atggagtatagaactgtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaag 298

                                           
Query: 61  ggcccaaaataccaggagattgtaaacatccg 92
           || || |||||||| || ||||| || |||||
Sbjct: 299 gggcctaaataccaagaaattgtcaatatccg 330
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>gb|AY059167.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1464

 Score = 48.1 bits (24), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||||| || ||| | || ||||| |||
Sbjct: 52  atggagtatagaactgtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaag 111

                                           
Query: 61  ggcccaaaataccaggagattgtaaacatccg 92
           || || |||||||| || ||||| || |||||
Sbjct: 112 gggcctaaataccaagaaattgtcaatatccg 143
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>gb|AY039518.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1862

 Score = 48.1 bits (24), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||||| || ||| | || ||||| |||
Sbjct: 131 atggagtatagaactgtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaag 190

                                           
Query: 61  ggcccaaaataccaggagattgtaaacatccg 92
           || || |||||||| || ||||| || |||||
Sbjct: 191 gggcctaaataccaagaaattgtcaatatccg 222
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>gb|AY045609.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1829

 Score = 44.1 bits (22), Expect = 0.070
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           |||||||| || || ||||||||||| || |||||||| || ||| | || ||||| |||
Sbjct: 100 atggagtatagaactgtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaag 159

                         
Query: 61  ggcccaaaatacca 74
           || || ||||||||
Sbjct: 160 gggcctaaatacca 173
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>emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in linkage group 23,
             complete sequence
          Length = 97428

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aaagtaaagggcccaaaata 71
             ||||||||||||||||||||
Sbjct: 82166 aaagtaaagggcccaaaata 82185
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>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence
          Length = 186799

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     acaaagtaaagggcccaaaa 69
              ||||||||||||||||||||
Sbjct: 153922 acaaagtaaagggcccaaaa 153903
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>emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in linkage group 8,
             complete sequence
          Length = 196375

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaagtaaagggcccaaaata 71
             ||||||||||||||||||||
Sbjct: 10967 aaagtaaagggcccaaaata 10948
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>emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 in linkage group 17,
            complete sequence
          Length = 165743

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   aaagtaaagggcccaaaata 71
            ||||||||||||||||||||
Sbjct: 4611 aaagtaaagggcccaaaata 4592
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>emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaagtaaagggcccaaaata 71
              ||||||||||||||||||||
Sbjct: 111593 aaagtaaagggcccaaaata 111574
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>emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in linkage group 8, complete
              sequence
          Length = 202747

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aaagtaaagggcccaaaata 71
              ||||||||||||||||||||
Sbjct: 191781 aaagtaaagggcccaaaata 191800
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>emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 in linkage group 19,
              complete sequence
          Length = 209585

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaagtaaagggcccaaaata 71
              ||||||||||||||||||||
Sbjct: 151489 aaagtaaagggcccaaaata 151470
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>emb|BX255897.3| Zebrafish DNA sequence from clone DKEY-263B2 in linkage group 20,
             complete sequence
          Length = 181862

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aaagtaaagggcccaaaata 71
             ||||||||||||||||||||
Sbjct: 10451 aaagtaaagggcccaaaata 10470
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>emb|BX927281.25| Zebrafish DNA sequence from clone CH211-255P12 in linkage group 18,
              complete sequence
          Length = 151835

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaagtaaagggcccaaaata 71
              ||||||||||||||||||||
Sbjct: 144783 aaagtaaagggcccaaaata 144764
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>emb|CR381668.8| Zebrafish DNA sequence from clone CH211-238A12 in linkage group 18,
             complete sequence
          Length = 155228

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaagtaaagggcccaaaata 71
             ||||||||||||||||||||
Sbjct: 41034 aaagtaaagggcccaaaata 41015



 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaagtaaagggcccaaaata 71
             ||||||||||||||||||||
Sbjct: 35088 aaagtaaagggcccaaaata 35069



 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaagtaaagggcccaaaata 71
             ||||||||||||||||||||
Sbjct: 29140 aaagtaaagggcccaaaata 29121
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>emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 in linkage group 19,
           complete sequence
          Length = 55374

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  aaagtaaagggcccaaaata 71
           ||||||||||||||||||||
Sbjct: 350 aaagtaaagggcccaaaata 331
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>emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in linkage group 19,
            complete sequence
          Length = 143486

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   aaagtaaagggcccaaaata 71
            ||||||||||||||||||||
Sbjct: 1651 aaagtaaagggcccaaaata 1670
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>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aaagtaaagggcccaaaata 71
              ||||||||||||||||||||
Sbjct: 196400 aaagtaaagggcccaaaata 196419
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>emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, complete sequence
          Length = 157691

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaagtaaagggcccaaaata 71
              ||||||||||||||||||||
Sbjct: 128692 aaagtaaagggcccaaaata 128673
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>ref|NM_191702.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1467

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  atggagtacaggacagtttctgg 23
          ||||||||||||||||| |||||
Sbjct: 55 atggagtacaggacagtctctgg 77
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>ref|XM_786517.1| PREDICTED: Strongylocentrotus purpuratus similar to CG17369-PB,
          isoform B (LOC586747), mRNA
          Length = 1365

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 31 ggacctctggttatcttggacaa 53
          ||||||||||||||| |||||||
Sbjct: 14 ggacctctggttatcctggacaa 36
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>gb|AC093401.4| Homo sapiens BAC clone RP11-93M19 from 2, complete sequence
          Length = 99088

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   aaagggcccaaaataccag 75
            |||||||||||||||||||
Sbjct: 7576 aaagggcccaaaataccag 7558
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>emb|AJ438590.1|MCR438590 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit B
           (vha-B gene)
          Length = 1962

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaag 60
           ||||| ||||| ||||| || ||||| || || |||||||||||| | || ||||| |||
Sbjct: 128 atggaatacagaacagtctcaggtgttgctgggcctctggttatcctagaaaaagttaag 187

                      
Query: 61  ggcccaaaata 71
           || || |||||
Sbjct: 188 ggacctaaata 198
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>dbj|AK103899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150J04, full
           insert sequence
          Length = 1893

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 1   atggagtacaggacagtttctgg 23
           ||||||||||||||||| |||||
Sbjct: 152 atggagtacaggacagtctctgg 174


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 755,810
Number of Sequences: 3902068
Number of extensions: 755810
Number of successful extensions: 47816
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47700
Number of HSP's gapped (non-prelim): 116
length of query: 98
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 77
effective length of database: 17,151,101,840
effective search space: 1320634841680
effective search space used: 1320634841680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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