| Clone Name | bags6p02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB038775.1| Hordeum vulgare mRNA for IDI2, complete cds Length = 1403 Score = 920 bits (464), Expect = 0.0 Identities = 470/472 (99%) Strand = Plus / Plus Query: 4 aaaaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatgga 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 aaaaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatgga 630 Query: 64 actgcccttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgc 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 actgcccttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgc 690 Query: 124 actgaaactcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgac 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 actgaaactcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgac 750 Query: 184 aaaatacccgccacgttgatagcagactctgctgcagctgcactgatgaataatgggcag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 aaaatacccgccacgttgatagcagactctgctgcagctgcactgatgaataatggacag 810 Query: 244 gttcaagctgtaattgtgggtgctgatcgtatagctgcaaatggtgacacggccaacaaa 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gttcaagctgtaattgtgggtgctgatcgtatagctgcaaatggtgacacggccaacaag 870 Query: 304 attggtacatacaacctctcgattgctgcaaagcatcacggcgtgcagttctacgtggca 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 871 attggtacatacaacctctcgattgctgcaaagcatcacggcgtgcagttctacgtggca 930 Query: 364 gcgccagtaacttcgattgatctctccctcccatctgggaagcaaatcgtcatagaagaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 931 gcgccagtaacttcgattgatctctccctcccatctgggaagcaaatcgtcatagaagaa 990 Query: 424 agatctcccaaagaattgttgaactctgaaggtggtctaggaaagcaagttg 475 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 agatctcccaaagaattgttgaactctgaaggtggtctaggaaagcaagttg 1042
>dbj|AK100869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023124H10, full insert sequence Length = 1344 Score = 484 bits (244), Expect = e-133 Identities = 409/464 (88%) Strand = Plus / Plus Query: 10 atttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgcc 69 |||||||||||||| || |||||||||||||| ||||| || |||||||||||||||||| Sbjct: 530 atttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaactgcc 589 Query: 70 cttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaa 129 | |||||||||||||||||||||||||||||| || | ||||||||||| ||||||||| Sbjct: 590 ttgggggttattcgtgctcttcactctggaggaattctagagaaggccttttgcactgaa 649 Query: 130 actcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaata 189 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || Sbjct: 650 actcgtccatttaaccagggttccaggcttacagctttcgagttagttcacgacaaagta 709 Query: 190 cccgccacgttgatagcagactctgctgcagctgcactgatgaataatgggcaggttcaa 249 ||||| ||| |||||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct: 710 cccgcaacgctgatagcagattctgctgcagctgcactgatgaagagcgggtgtattcaa 769 Query: 250 gctgtaattgtgggtgctgatcgtatagctgcaaatggtgacacggccaacaaaattggt 309 |||||||| || || ||||||||||| ||||| |||||||| || || ||||| ||||| Sbjct: 770 gctgtaatcgttggagctgatcgtatcgctgccaatggtgatactgctaacaagattggc 829 Query: 310 acatacaacctctcgattgctgcaaagcatcacggcgtgcagttctacgtggcagcgcca 369 |||||||||||| | ||| |||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 830 acatacaacctcgccatttctgcgaagcatcacggtgtgcaattctacgtggctgcgccg 889 Query: 370 gtaacttcgattgatctctccctcccatctgggaagcaaatcgtcatagaagaaagatct 429 ||||||||||||||||||||||||||||||| ||||||| || || ||||| || ||| Sbjct: 890 ataacttcgattgatctctccctcccatctggtgagcaaattgtgatcgaagagaggtct 949 Query: 430 cccaaagaattgttgaactctgaaggtggtctaggaaagcaagt 473 ||||| || ||| |||||||||||||||| ||||| |||||||| Sbjct: 950 cccaatgagttgctgaactctgaaggtggcctaggtaagcaagt 993
>dbj|AK060549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H07, full insert sequence Length = 1391 Score = 484 bits (244), Expect = e-133 Identities = 409/464 (88%) Strand = Plus / Plus Query: 10 atttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgcc 69 |||||||||||||| || |||||||||||||| ||||| || |||||||||||||||||| Sbjct: 604 atttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaactgcc 663 Query: 70 cttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaa 129 | |||||||||||||||||||||||||||||| || | ||||||||||| ||||||||| Sbjct: 664 ttgggggttattcgtgctcttcactctggaggaattctagagaaggccttttgcactgaa 723 Query: 130 actcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaata 189 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || Sbjct: 724 actcgtccatttaaccagggttccaggcttacagctttcgagttagttcacgacaaagta 783 Query: 190 cccgccacgttgatagcagactctgctgcagctgcactgatgaataatgggcaggttcaa 249 ||||| ||| |||||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct: 784 cccgcaacgctgatagcagattctgctgcagctgcactgatgaagagcgggtgtattcaa 843 Query: 250 gctgtaattgtgggtgctgatcgtatagctgcaaatggtgacacggccaacaaaattggt 309 |||||||| || || ||||||||||| ||||| |||||||| || || ||||| ||||| Sbjct: 844 gctgtaatcgttggagctgatcgtatcgctgccaatggtgatactgctaacaagattggc 903 Query: 310 acatacaacctctcgattgctgcaaagcatcacggcgtgcagttctacgtggcagcgcca 369 |||||||||||| | ||| |||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 904 acatacaacctcgccatttctgcgaagcatcacggtgtgcaattctacgtggctgcgccg 963 Query: 370 gtaacttcgattgatctctccctcccatctgggaagcaaatcgtcatagaagaaagatct 429 ||||||||||||||||||||||||||||||| ||||||| || || ||||| || ||| Sbjct: 964 ataacttcgattgatctctccctcccatctggtgagcaaattgtgatcgaagagaggtct 1023 Query: 430 cccaaagaattgttgaactctgaaggtggtctaggaaagcaagt 473 ||||| || ||| |||||||||||||||| ||||| |||||||| Sbjct: 1024 cccaatgagttgctgaactctgaaggtggcctaggtaagcaagt 1067
>dbj|AK060326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H10, full insert sequence Length = 1538 Score = 484 bits (244), Expect = e-133 Identities = 409/464 (88%) Strand = Plus / Plus Query: 10 atttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgcc 69 |||||||||||||| || |||||||||||||| ||||| || |||||||||||||||||| Sbjct: 592 atttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaactgcc 651 Query: 70 cttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaa 129 | |||||||||||||||||||||||||||||| || | ||||||||||| ||||||||| Sbjct: 652 ttgggggttattcgtgctcttcactctggaggaattctagagaaggccttttgcactgaa 711 Query: 130 actcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaata 189 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || Sbjct: 712 actcgtccatttaaccagggttccaggcttacagctttcgagttagttcacgacaaagta 771 Query: 190 cccgccacgttgatagcagactctgctgcagctgcactgatgaataatgggcaggttcaa 249 ||||| ||| |||||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct: 772 cccgcaacgctgatagcagattctgctgcagctgcactgatgaagagcgggtgtattcaa 831 Query: 250 gctgtaattgtgggtgctgatcgtatagctgcaaatggtgacacggccaacaaaattggt 309 |||||||| || || ||||||||||| ||||| |||||||| || || ||||| ||||| Sbjct: 832 gctgtaatcgttggagctgatcgtatcgctgccaatggtgatactgctaacaagattggc 891 Query: 310 acatacaacctctcgattgctgcaaagcatcacggcgtgcagttctacgtggcagcgcca 369 |||||||||||| | ||| |||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 892 acatacaacctcgccatttctgcgaagcatcacggtgtgcaattctacgtggctgcgccg 951 Query: 370 gtaacttcgattgatctctccctcccatctgggaagcaaatcgtcatagaagaaagatct 429 ||||||||||||||||||||||||||||||| ||||||| || || ||||| || ||| Sbjct: 952 ataacttcgattgatctctccctcccatctggtgagcaaattgtgatcgaagagaggtct 1011 Query: 430 cccaaagaattgttgaactctgaaggtggtctaggaaagcaagt 473 ||||| || ||| |||||||||||||||| ||||| |||||||| Sbjct: 1012 cccaatgagttgctgaactctgaaggtggcctaggtaagcaagt 1055
>gb|AY738148.1| Zea mays isopentenyl-diphosphate delta isomerase 2 mRNA, complete cds Length = 1382 Score = 458 bits (231), Expect = e-126 Identities = 414/475 (87%) Strand = Plus / Plus Query: 1 tcaaaaaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttat 60 |||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 614 tcaaaaaagatatctgttctaacccattgtaatactggcagtcttgcaactgctggttat 673 Query: 61 ggaactgcccttggggttattcgtgctcttcactctggaggagttttggagaaggccttc 120 |||||||||||||||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 674 ggaactgcccttggggttatacgcgctcttcattcggggggagttttagagaaggccttt 733 Query: 121 tgcactgaaactcgtccatttaaccagggttccaggcttacagcttttgagttagttcat 180 ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 734 tgcaccgaaactcgtccatttaaccagggatccagacttacagctttcgagttagttcat 793 Query: 181 gacaaaatacccgccacgttgatagcagactctgctgcagctgcactgatgaataatggg 240 || |||||||| || || |||||||||| |||||||| ||||| ||||||| | ||| Sbjct: 794 gaaaaaatacctgcaacactgatagcagattctgctgctgctgcgttgatgaaacaaggg 853 Query: 241 caggttcaagctgtaattgtgggtgctgatcgtatagctgcaaatggtgacacggccaac 300 || ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 854 catgttcaggctgtcattgttggtgctgatcgaatagcagcaaatggtgacacagccaac 913 Query: 301 aaaattggtacatacaacctctcgattgctgcaaagcatcacggcgtgcagttctacgtg 360 || ||||| ||||| |||||| | || | || |||||||| |||| ||| |||| ||| Sbjct: 914 aagattggcacatataacctcgccatctccgcgaagcatcatagcgtccaggtctatgtg 973 Query: 361 gcagcgccagtaacttcgattgatctctccctcccatctgggaagcaaatcgtcatagaa 420 |||||||| |||||||| |||||||||||||||||||||||| | | || ||||||||| Sbjct: 974 gcagcgccggtaacttccattgatctctccctcccatctggggatgagatagtcatagaa 1033 Query: 421 gaaagatctcccaaagaattgttgaactctgaaggtggtctaggaaagcaagttg 475 |||||||| || || || ||| ||||||||||||||||||| ||||||||||||| Sbjct: 1034 gaaagatcaccaaaggagttgctgaactctgaaggtggtctgggaaagcaagttg 1088
>gb|AY104678.1| Zea mays PCO081661 mRNA sequence Length = 1558 Score = 436 bits (220), Expect = e-119 Identities = 412/475 (86%), Gaps = 1/475 (0%) Strand = Plus / Plus Query: 1 tcaaaaaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttat 60 |||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 614 tcaaaaaagatatctgttctaacccattgtaatactggcagtcttgcaactgctggttat 673 Query: 61 ggaactgcccttggggttattcgtgctcttcactctggaggagttttggagaaggccttc 120 |||||||||||||||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 674 ggaactgcccttggggttatacgcgctcttcattcggggggagttttagagaaggccttt 733 Query: 121 tgcactgaaactcgtccatttaaccagggttccaggcttacagcttttgagttagttcat 180 ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 734 tgcaccgaaactcgtccatttaaccagggatccagacttacagctttcgagttagttcat 793 Query: 181 gacaaaatacccgccacgttgatagcagactctgctgcagctgcactgatgaataatggg 240 || |||||||| || || |||||||||| |||||||| ||||| ||||||| | ||| Sbjct: 794 gaaaaaatacctgcaacactgatagcagattctgctgctgctgcgttgatgaaacaaggg 853 Query: 241 caggttcaagctgtaattgtgggtgctgatcgtatagctgcaaatggtgacacggccaac 300 || ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 854 catgttcaggctgtcattgttggtgctgatcgaatagcagcaaatggtgacacagccaac 913 Query: 301 aaaattggtacatacaacctctcgattgctgcaaagcatcacggcgtgcagttctacgtg 360 || ||||| ||||| |||||| | || | || || |||| |||| ||| |||| ||| Sbjct: 914 aagattggcacatataacctcgccatctccgcgaa-natcatagcgtccaggtctatgtg 972 Query: 361 gcagcgccagtaacttcgattgatctctccctcccatctgggaagcaaatcgtcatagaa 420 |||||||| |||||||| |||||||||||||||||||||||| | | || ||||||||| Sbjct: 973 gcagcgccggtaacttccattgatctctccctcccatctggggatgagatagtcatagaa 1032 Query: 421 gaaagatctcccaaagaattgttgaactctgaaggtggtctaggaaagcaagttg 475 |||||||| || || || ||| ||||||||||||||||||| ||||||||||||| Sbjct: 1033 gaaagatcaccaaaggagttgctgaactctgaaggtggtctgggaaagcaagttg 1087
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 167 bits (84), Expect = 4e-38 Identities = 153/176 (86%) Strand = Plus / Plus Query: 298 aacaaaattggtacatacaacctctcgattgctgcaaagcatcacggcgtgcagttctac 357 ||||| ||||| |||||||||||| | ||| |||| ||||||||||| ||||| |||||| Sbjct: 83457 aacaagattggcacatacaacctcgccatttctgcgaagcatcacggtgtgcaattctac 83516 Query: 358 gtggcagcgccagtaacttcgattgatctctccctcccatctgggaagcaaatcgtcata 417 ||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || || Sbjct: 83517 gtggctgcgccgataacttcgattgatctctccctcccatctggtgagcaaattgtgatc 83576 Query: 418 gaagaaagatctcccaaagaattgttgaactctgaaggtggtctaggaaagcaagt 473 ||||| || |||||||| || ||| |||||||||||||||| ||||| |||||||| Sbjct: 83577 gaagagaggtctcccaatgagttgctgaactctgaaggtggcctaggtaagcaagt 83632 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 38 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 97 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 82807 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 82866 Query: 98 gaggagttttggagaaggccttctgcactgaaactcgtccatttaaccagg 148 ||||| || | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 82867 gaggaattctagagaaggccttttgcactgaaactcgtccatttaaccagg 82917 Score = 145 bits (73), Expect = 2e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 144 ccagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgat 203 |||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| |||| Sbjct: 83218 ccagggttccaggcttacagctttcgagttagttcacgacaaagtacccgcaacgctgat 83277 Query: 204 agcagactctgctgcagctgcactgatgaataatgggcaggttcaagctgtaattgtggg 263 |||||| ||||||||||||||||||||||| | ||| ||||||||||||| || || Sbjct: 83278 agcagattctgctgcagctgcactgatgaagagcgggtgtattcaagctgtaatcgttgg 83337 Query: 264 tgctgatcgtatagctgcaaatggt 288 ||||||||||| ||||| |||||| Sbjct: 83338 agctgatcgtatcgctgccaatggt 83362 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 10 atttctgttctaacccattgtaatactggcag 41 |||||||||||||| || |||||||||||||| Sbjct: 82675 atttctgttctaacacactgtaatactggcag 82706
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 167 bits (84), Expect = 4e-38 Identities = 153/176 (86%) Strand = Plus / Plus Query: 298 aacaaaattggtacatacaacctctcgattgctgcaaagcatcacggcgtgcagttctac 357 ||||| ||||| |||||||||||| | ||| |||| ||||||||||| ||||| |||||| Sbjct: 6027374 aacaagattggcacatacaacctcgccatttctgcgaagcatcacggtgtgcaattctac 6027433 Query: 358 gtggcagcgccagtaacttcgattgatctctccctcccatctgggaagcaaatcgtcata 417 ||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || || Sbjct: 6027434 gtggctgcgccgataacttcgattgatctctccctcccatctggtgagcaaattgtgatc 6027493 Query: 418 gaagaaagatctcccaaagaattgttgaactctgaaggtggtctaggaaagcaagt 473 ||||| || |||||||| || ||| |||||||||||||||| ||||| |||||||| Sbjct: 6027494 gaagagaggtctcccaatgagttgctgaactctgaaggtggcctaggtaagcaagt 6027549 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 38 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 97 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6026724 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 6026783 Query: 98 gaggagttttggagaaggccttctgcactgaaactcgtccatttaaccagg 148 ||||| || | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 6026784 gaggaattctagagaaggccttttgcactgaaactcgtccatttaaccagg 6026834 Score = 145 bits (73), Expect = 2e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 144 ccagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgat 203 |||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| |||| Sbjct: 6027135 ccagggttccaggcttacagctttcgagttagttcacgacaaagtacccgcaacgctgat 6027194 Query: 204 agcagactctgctgcagctgcactgatgaataatgggcaggttcaagctgtaattgtggg 263 |||||| ||||||||||||||||||||||| | ||| ||||||||||||| || || Sbjct: 6027195 agcagattctgctgcagctgcactgatgaagagcgggtgtattcaagctgtaatcgttgg 6027254 Query: 264 tgctgatcgtatagctgcaaatggt 288 ||||||||||| ||||| |||||| Sbjct: 6027255 agctgatcgtatcgctgccaatggt 6027279 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 10 atttctgttctaacccattgtaatactggcag 41 |||||||||||||| || |||||||||||||| Sbjct: 6026592 atttctgttctaacacactgtaatactggcag 6026623
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 167 bits (84), Expect = 4e-38 Identities = 153/176 (86%) Strand = Plus / Plus Query: 298 aacaaaattggtacatacaacctctcgattgctgcaaagcatcacggcgtgcagttctac 357 ||||| ||||| |||||||||||| | ||| |||| ||||||||||| ||||| |||||| Sbjct: 6093851 aacaagattggcacatacaacctcgccatttctgcgaagcatcacggtgtgcaattctac 6093910 Query: 358 gtggcagcgccagtaacttcgattgatctctccctcccatctgggaagcaaatcgtcata 417 ||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || || Sbjct: 6093911 gtggctgcgccgataacttcgattgatctctccctcccatctggtgagcaaattgtgatc 6093970 Query: 418 gaagaaagatctcccaaagaattgttgaactctgaaggtggtctaggaaagcaagt 473 ||||| || |||||||| || ||| |||||||||||||||| ||||| |||||||| Sbjct: 6093971 gaagagaggtctcccaatgagttgctgaactctgaaggtggcctaggtaagcaagt 6094026 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 38 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 97 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6093201 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 6093260 Query: 98 gaggagttttggagaaggccttctgcactgaaactcgtccatttaaccagg 148 ||||| || | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 6093261 gaggaattctagagaaggccttttgcactgaaactcgtccatttaaccagg 6093311 Score = 145 bits (73), Expect = 2e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 144 ccagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgat 203 |||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| |||| Sbjct: 6093612 ccagggttccaggcttacagctttcgagttagttcacgacaaagtacccgcaacgctgat 6093671 Query: 204 agcagactctgctgcagctgcactgatgaataatgggcaggttcaagctgtaattgtggg 263 |||||| ||||||||||||||||||||||| | ||| ||||||||||||| || || Sbjct: 6093672 agcagattctgctgcagctgcactgatgaagagcgggtgtattcaagctgtaatcgttgg 6093731 Query: 264 tgctgatcgtatagctgcaaatggt 288 ||||||||||| ||||| |||||| Sbjct: 6093732 agctgatcgtatcgctgccaatggt 6093756 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 10 atttctgttctaacccattgtaatactggcag 41 |||||||||||||| || |||||||||||||| Sbjct: 6093069 atttctgttctaacacactgtaatactggcag 6093100
>ref|NM_001036262.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.3 mRNA, complete cds Length = 1395 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 503 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 562 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 563 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 622 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 623 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 682 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 683 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 725
>ref|NM_201699.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.2 mRNA, complete cds Length = 1530 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 638 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 697 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 698 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 757 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 758 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 817 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 818 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 860
>ref|NM_126596.2| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.1 mRNA, complete cds Length = 1510 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 618 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 677 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 678 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 737 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 738 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 797 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 798 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 840
>gb|AY128839.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1024 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 356 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 415 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 416 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 475 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 476 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 535 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 536 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 578
>gb|AY099595.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1202 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 433 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 492 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 493 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 552 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 553 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 612 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 613 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 655
>emb|BX821142.1|CNS0AA41 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZD03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1269 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 564 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 623 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 624 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 683 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 684 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 743 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 744 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 786
>emb|BX820919.1|CNS0A8MI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1253 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 525 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 584 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 585 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 644 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 645 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 704 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 705 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 747
>emb|BX820068.1|CNS0A8IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1454 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 638 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 697 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 698 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 757 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 758 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 817 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 818 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 860
>emb|BX819922.1|CNS0A7WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1323 Score = 101 bits (51), Expect = 2e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 582 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 641 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 642 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 701 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 702 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 761 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 762 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 804
>gb|AY087601.1| Arabidopsis thaliana clone 36965 mRNA, complete sequence Length = 1386 Score = 97.6 bits (49), Expect = 3e-17 Identities = 179/223 (80%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| || | |||||||||||| ||||| || ||||| ||||||| Sbjct: 618 tttctgttttgacccattgcaacamtggcagccttgctaccgccggatatggtactgccc 677 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 678 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 737 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 190 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 738 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 797 Query: 191 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 233 | || || | || |||||||| |||||||||||||||||||| Sbjct: 798 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 840
>dbj|AB031321.1| Nicotiana tabacum cig2 mRNA, complete cds Length = 1378 Score = 81.8 bits (41), Expect = 2e-12 Identities = 212/269 (78%) Strand = Plus / Plus Query: 52 gctggttatggaactgcccttggggttattcgtgctcttcactctggaggagttttggag 111 ||||| ||||||||||| ||||| ||||| || || ||| | ||| |||||| | || Sbjct: 575 gctggatatggaactgctcttggtgttatccgggcactttatactgatggagttctagaa 634 Query: 112 aaggccttctgcactgaaactcgtccatttaaccagggttccaggcttacagcttttgag 171 | ||| |||||||| ||||| ||||| || || ||||| ||||| | || || || ||| Sbjct: 635 agggcattctgcacagaaacccgtcccttcaatcagggatccagattgaccgcattcgag 694 Query: 172 ttagttcatgacaaaatacccgccacgttgatagcagactctgctgcagctgcactgatg 231 || |||||||| || ||||| ||||| | |||||||| || |||||||||||| ||||| Sbjct: 695 ttggttcatgagaacataccagccacccttatagcagattcagctgcagctgcattgatg 754 Query: 232 aataatgggcaggttcaagctgtaattgtgggtgctgatcgtatagctgcaaatggtgac 291 ||| ||| | ||| ||||||| ||||| || ||||||||| |||| || |||||||| Sbjct: 755 aatgctggtcgggtgaaagctgtcattgttggagctgatcgtgtagccgccaatggtgat 814 Query: 292 acggccaacaaaattggtacatacaacct 320 || ||||| || || || || |||||||| Sbjct: 815 actgccaataagatcggaacttacaacct 843
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 145 cagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgata 204 ||||| || ||||||||||| |||||||| || ||||| ||||| || || || | || Sbjct: 15086 cagggatcgaggcttacagcgtttgagttggtgcatgagaaaatccctgcaactctcatt 15145 Query: 205 gcagactctgctgcagctgcactgatgaa 233 |||||||| |||||||||||||||||||| Sbjct: 15146 gcagactcagctgcagctgcactgatgaa 15174 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ctgcactgaaactcgtccatttaa 143 |||||| ||||||||||||||||| Sbjct: 14792 ctgcacagaaactcgtccatttaa 14815
>emb|BX821946.1|CNS0A8CG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1261 Score = 52.0 bits (26), Expect = 0.002 Identities = 128/162 (79%) Strand = Plus / Plus Query: 11 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 70 |||||||| | |||||||| |||||||||| |||||| ||||| || ||||| ||||||| Sbjct: 531 tttctgttttgacccattgcaatactggcacccttgctaccgccggatatggtactgccc 590 Query: 71 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 130 | || || || ||||| || || || |||| | || || | || | ||| || |||| Sbjct: 591 tcggtgtaatccgtgcactccatactcaaggattcttagaaagagcatactgaacagaaa 650 Query: 131 ctcgtccatttaaccagggttccaggcttacagcttttgagt 172 ||||||||||||| || || || ||||| ||||| ||||||| Sbjct: 651 ctcgtccatttaatcaaggatcgaggctcacagcgtttgagt 692
>gb|AC156828.8| Medicago truncatula clone mth2-18j19, complete sequence Length = 133901 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Minus Query: 145 cagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgata 204 ||||| ||||| ||||| || | |||||| || |||||||||||||| || || | || Sbjct: 30601 cagggatccagacttactgcctatgagttggtacatgacaaaataccagcaactcttatt 30542 Query: 205 gcagactctgctgcagctgca 225 ||||| ||||||||||||||| Sbjct: 30541 gcagattctgctgcagctgca 30521 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Minus Query: 406 caaatcgtcatagaagaaagatctcccaaagaattgttgaac 447 ||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 30245 caaattgtcattgaagagagatctcccaaggagttgttgaac 30204
>emb|BX819929.1|CNS0A8I4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 205 gcagactctgctgcagctgcactgatgaa 233 |||||||| |||||||||||||||||||| Sbjct: 25 gcagactcagctgcagctgcactgatgaa 53
>ref|XM_679183.1| PREDICTED: Danio rerio similar to MGC81751 protein (LOC556393), mRNA Length = 1626 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 95 ctggaggagttttggagaaggcc 117 ||||||||||||||||||||||| Sbjct: 962 ctggaggagttttggagaaggcc 940
>ref|XM_392553.2| PREDICTED: Apis mellifera similar to CG11334-PB, isoform B (LOC409023), mRNA Length = 1586 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 20 taacccattgtaatactggcagccttgcaaccgctggttatgg 62 |||||||||| ||||| || ||||||||||| || |||||||| Sbjct: 668 taacccattgcaatacgggtagccttgcaacagcaggttatgg 710
>gb|AC124440.3| Mus musculus BAC clone RP24-176E5 from chromosome 3, complete sequence Length = 173198 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 caaaattggtacatacaacctc 321 |||||||||||||||||||||| Sbjct: 140861 caaaattggtacatacaacctc 140840
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 cacggcgtgcagttctacgtggcagc 365 |||||||||| ||||||||||||||| Sbjct: 459986 cacggcgtgccgttctacgtggcagc 460011
>ref|NM_001016877.2| Xenopus tropicalis hypothetical protein LOC549631 (LOC549631), mRNA Length = 1337 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 118 ttctgcactgaaactcgtccatttaaccagggttccaggcttacagctt 166 ||||||||||| || ||||| | |||||||| ||||||||||| |||| Sbjct: 642 ttctgcactgagacccgtccttacaaccagggctccaggcttacggctt 690
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||||||||| |||||||| |||||||| Sbjct: 743299 aatggtgacaccgccaacaagattggtac 743327
>ref|XM_453746.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D15455g predicted mRNA Length = 1224 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||||||||||||||| || |||||||| Sbjct: 838 aatggtgacacggccaataagattggtac 866
>ref|XM_380743.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00567.1) partial mRNA Length = 7884 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gcccttggggttattcgtgct 87 ||||||||||||||||||||| Sbjct: 6955 gcccttggggttattcgtgct 6975
>ref|XM_572885.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02750) partial mRNA Length = 1351 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||||||||| |||||||| |||||||| Sbjct: 913 aatggtgacaccgccaacaagattggtac 941
>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the 3' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), complete sequence Length = 183815 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 caaaaaacatttctgttctaaccca 26 ||||||||| ||||||||||||||| Sbjct: 26699 caaaaaacagttctgttctaaccca 26675
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||||||||||||||| || |||||||| Sbjct: 1310484 aatggtgacacggccaataagattggtac 1310512
>ref|NM_170551.1| Drosophila melanogaster CG11334-RA, transcript variant A (CG11334), mRNA Length = 1514 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||| |||||||||||||| |||||||| Sbjct: 1006 aatggcgacacggccaacaagattggtac 1034
>ref|NM_143611.2| Drosophila melanogaster CG11334-RB, transcript variant B (CG11334), mRNA Length = 1428 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||| |||||||||||||| |||||||| Sbjct: 920 aatggcgacacggccaacaagattggtac 948
>gb|AY060664.1| Drosophila melanogaster GH08894 full length cDNA Length = 1455 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||| |||||||||||||| |||||||| Sbjct: 920 aatggcgacacggccaacaagattggtac 948
>gb|AC009349.6|AC009349 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone BACR10O09, complete sequence Length = 165555 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||| |||||||||||||| |||||||| Sbjct: 23526 aatggcgacacggccaacaagattggtac 23498
>gb|AC008287.4|AC008287 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone BACR02G16, complete sequence Length = 177480 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||| |||||||||||||| |||||||| Sbjct: 113456 aatggcgacacggccaacaagattggtac 113428
>gb|AF287134.1| Ochromonas danica mitochondrial DNA, complete genome Length = 41035 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 atagcagactctgctgcagct 222 ||||||||||||||||||||| Sbjct: 34496 atagcagactctgctgcagct 34476
>emb|CR848601.2| Xenopus tropicalis finished cDNA, clone TGas129a07 Length = 1337 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 118 ttctgcactgaaactcgtccatttaaccagggttccaggcttacagctt 166 ||||||||||| || ||||| | |||||||| ||||||||||| |||| Sbjct: 642 ttctgcactgagacccgtccttacaaccagggctccaggcttacggctt 690
>gb|AE003778.3| Drosophila melanogaster chromosome 3R, section 116 of 118 of the complete sequence Length = 225974 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 aatggtgacacggccaacaaaattggtac 311 ||||| |||||||||||||| |||||||| Sbjct: 95723 aatggcgacacggccaacaagattggtac 95695
>gb|U54635.1|ODU54635 Ochromonas danica NADH dehydrogenase (nad4L) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 332 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 atagcagactctgctgcagct 222 ||||||||||||||||||||| Sbjct: 239 atagcagactctgctgcagct 219
>ref|XM_424985.1| PREDICTED: Gallus gallus similar to stomatin (EPB72)-like 2; stomatin-like protein 2; stomatin-like 2 (LOC427411), mRNA Length = 962 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gccacgttgatagcagactc 212 |||||||||||||||||||| Sbjct: 365 gccacgttgatagcagactc 346
>ref|XM_877675.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 5 (LOC539399), mRNA Length = 1984 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tagaagaaagatctcccaaa 435 |||||||||||||||||||| Sbjct: 1745 tagaagaaagatctcccaaa 1764
>ref|XM_877629.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 4 (LOC539399), mRNA Length = 1837 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tagaagaaagatctcccaaa 435 |||||||||||||||||||| Sbjct: 1598 tagaagaaagatctcccaaa 1617
>ref|XM_877584.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 3 (LOC539399), mRNA Length = 2107 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tagaagaaagatctcccaaa 435 |||||||||||||||||||| Sbjct: 1868 tagaagaaagatctcccaaa 1887
>ref|XM_586888.2| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 1 (LOC539399), mRNA Length = 2053 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tagaagaaagatctcccaaa 435 |||||||||||||||||||| Sbjct: 1814 tagaagaaagatctcccaaa 1833
>ref|XM_747148.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g05830) partial mRNA Length = 1164 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 283 aatggtgacacggccaacaaaattggtacata 314 ||||| ||||| ||||||||||| |||||||| Sbjct: 784 aatggagacacagccaacaaaataggtacata 815
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 ctgaaggtggtctaggaaagcaag 472 ||||||||||||||| |||||||| Sbjct: 2784974 ctgaaggtggtctagaaaagcaag 2784997
>emb|AL357057.19| Human DNA sequence from clone RP11-802N13 on chromosome 6 Contains part of the CLIC5 gene for chloride intracellular channel 5, complete sequence Length = 58133 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 agaagaaagatctcccaaag 436 |||||||||||||||||||| Sbjct: 44623 agaagaaagatctcccaaag 44604
>emb|CR386500.1| Gallus gallus finished cDNA, clone ChEST333h21 Length = 1243 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gccacgttgatagcagactc 212 |||||||||||||||||||| Sbjct: 649 gccacgttgatagcagactc 630
>emb|CR385785.1| Gallus gallus finished cDNA, clone ChEST68h19 Length = 986 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gccacgttgatagcagactc 212 |||||||||||||||||||| Sbjct: 392 gccacgttgatagcagactc 373
>emb|BX932823.1| Gallus gallus finished cDNA, clone ChEST268c7 Length = 1288 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gccacgttgatagcagactc 212 |||||||||||||||||||| Sbjct: 693 gccacgttgatagcagactc 674
>emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chromosome X, complete sequence Length = 199101 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ggagttttggagaaggcctt 119 |||||||||||||||||||| Sbjct: 171021 ggagttttggagaaggcctt 171040
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ggagttttggagaaggcctt 119 |||||||||||||||||||| Sbjct: 162803 ggagttttggagaaggcctt 162822
>emb|AJ270774.1|HSA270774 Homo sapiens partial TCF-4 gene for T-cell transcription factor-4, exons 6-11 Length = 24413 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 caaaaaacatttctgttctaaccc 25 ||||||||| |||||||||||||| Sbjct: 20652 caaaaaacagttctgttctaaccc 20629 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,550,221 Number of Sequences: 3902068 Number of extensions: 4550221 Number of successful extensions: 80057 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79853 Number of HSP's gapped (non-prelim): 191 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)